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Zhang S, Kuzyakov Y, Jia Z, Bai E, Morriën E, Liang A. Cascading Effects Within Soil Food Web Amplify Fungal Biomass and Necromass Production. GLOBAL CHANGE BIOLOGY 2025; 31:e70235. [PMID: 40387468 DOI: 10.1111/gcb.70235] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2024] [Revised: 04/20/2025] [Accepted: 04/21/2025] [Indexed: 05/20/2025]
Abstract
Soil food webs regulate microbial biomass and necromass production and are therefore critical for carbon sequestration. The mechanisms by which top predators regulate microbial necromass formation across multitrophic levels in the real-world soil food web remain nearly unknown. This study investigates how top-down forces-from omnivorous-predaceous nematodes to microbivorous nematodes and microbes-affect the formation of microbial necromass within tritrophic food webs under contrasting tillage regimes (tillage (till) vs. no-tillage (no-till)) on black soils (Mollisols), using a 1-year 13C-labeled straw in situ tracing experiment integrated with a long-term (> 5 years) tillage trial. The fungal-to-bacterial necromass ratio increased strongly in the no-till soil compared to the till soil, with omnivores-predators being the key factor for these changes. In the no-till soil, abundant and diverse omnivores-predators (46% and 67% higher in abundance and richness than in the till soil) created a typical predator-prey relationship with fungivores. This relationship was characterized by heavy predation on fungivores (51% of omnivore-predator diet) and opposite 1-year dynamics of 13C content between omnivores-predators and fungivores. Such a predator-prey relationship substantially reduced fungivore activity (73% and 90% decrease in 13C content and enrichment rate), while accompanied by increased fungal activity (64% and 50% increase in 13C content and enrichment rate) in the no-till soil compared to the till soil. This predator-driven cascade down the food chain amplified the fungal contribution to the fungal-to-bacterial necromass ratio. Conversely, these interactions, disrupted by continuous tillage, weakened fungal functions by interrupting the trophic cascade. In conclusion, these tiny yet ubiquitous omnivorous-predaceous nematodes exert a disproportionate impact on necromass formation by boosting fungal biomass and activity. Further manipulative experiments targeting multi-trophic interactions are essential to disentangle the mechanisms of microbial necromass formation, given the inherent complexity of soil food webs and the observational nature of this study.
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Affiliation(s)
- Shixiu Zhang
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Yakov Kuzyakov
- Department of Agricultural Soil Science, Department of Soil Science of Temperate Ecosystems, University of Goettingen, Goettingen, Germany
- Peoples Friendship University of Russia (RUDN University), Moscow, Russia
| | - Zhongjun Jia
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
| | - Edith Bai
- Key Laboratory of Geographical Processes and Ecological Security of Changbai Mountains, Ministry of Education; School of Geographical Sciences, Northeast Normal University, Changchun, China
| | - Elly Morriën
- Institute of Biodiversity and Ecosystem Dynamics (IBED-ELD), Department of Ecosystem and Landscape Dynamics, University of Amsterdam, Amsterdam, the Netherlands
| | - Aizhen Liang
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
- University of Chinese Academy of Sciences, Beijing, China
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van Rijssel SQ, Koorneef GJ, Veen GFC, Pulleman MM, de Goede RGM, Comans RNJ, van der Putten WH, Mason-Jones K. Conventional and organic farms with more intensive management have lower soil functionality. Science 2025; 388:410-415. [PMID: 40273235 DOI: 10.1126/science.adr0211] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2024] [Accepted: 03/13/2025] [Indexed: 04/26/2025]
Abstract
Organic farming is often considered to be more sustainable than conventional farming. However, both farming systems comprise highly variable management practices. In this study, we show that in organic and conventional arable fields, the multifunctionality of soils decreases with increasing agricultural management intensity. Soil organic carbon content and bacterial biomass, respectively, were the strongest abiotic and biotic predictors of soil multifunctionality. Greater soil multifunctionality was associated with less-frequent inversion tillage and higher frequency of grass-legume cover cropping, and organic farming did not outperform conventional farming. Our results suggest that reducing management intensity will enhance soil multifunctionality in both conventional and organic farming. This implies that, in contexts where high-yielding, high-intensity agriculture prevails, the paradigm of sustainable intensification should be replaced by "productive deintensification."
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Affiliation(s)
- Sophie Q van Rijssel
- Department of Terrestrial Ecology, Netherlands Institute for Ecology (NIOO-KNAW), Wageningen, Netherlands
| | - Guusje J Koorneef
- Soil Chemistry Group, Wageningen University & Research, Wageningen, Netherlands
- Soil Biology Group, Wageningen University & Research, Wageningen, Netherlands
| | - G F Ciska Veen
- Department of Terrestrial Ecology, Netherlands Institute for Ecology (NIOO-KNAW), Wageningen, Netherlands
| | - Mirjam M Pulleman
- Soil Biology Group, Wageningen University & Research, Wageningen, Netherlands
- International Center for Tropical Agriculture (CIAT), Cali, Colombia
| | - Ron G M de Goede
- Soil Biology Group, Wageningen University & Research, Wageningen, Netherlands
| | - Rob N J Comans
- Soil Chemistry Group, Wageningen University & Research, Wageningen, Netherlands
- TNO, Geological Survey of the Netherlands, Utrecht, Netherlands
| | - Wim H van der Putten
- Department of Terrestrial Ecology, Netherlands Institute for Ecology (NIOO-KNAW), Wageningen, Netherlands
- Laboratory of Nematology, Wageningen University & Research, Wageningen, Netherlands
| | - Kyle Mason-Jones
- Department of Terrestrial Ecology, Netherlands Institute for Ecology (NIOO-KNAW), Wageningen, Netherlands
- Soil Microbial Interactions, Department of Geoscience, University of Tübingen, Tübingen, Germany
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Yi H, Ferlian O, Gauzens B, Rebollo R, Scheu S, Amyntas A, Ciobanu M, Potapov A, Salamon JA, Eisenhauer N. Belowground energy fluxes determine tree diversity effects on above- and belowground food webs. Curr Biol 2025; 35:1870-1882.e6. [PMID: 40209707 DOI: 10.1016/j.cub.2025.03.034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2024] [Revised: 03/06/2025] [Accepted: 03/17/2025] [Indexed: 04/12/2025]
Abstract
Worldwide tree diversity loss raises concerns about functional and energetic declines across trophic levels. In this study, we coupled 160 above- and belowground food webs, quantifying energy fluxes to microorganisms and invertebrates in a tree-mycorrhiza diversity experiment, to test how tree diversity affects fluxes of energy above and below the ground. The experiment differentiates three mycorrhizal type treatments: only AM tree species (with arbuscular mycorrhizae), only EcM tree species (with ectomycorrhizae; one, two, and four tree species), or mixtures of both AM and EcM tree species (AM+EcM; two and four tree species). Our results indicate that most energy initially flowed through belowground communities, with soil microorganisms contributing 97.7% of total energy and belowground fauna accounting for 60.9% of energy to animals. Consequently, belowground fauna fueled surface (62.3% of predation) and aboveground (30.5% of predation) predators. Tree diversity increased ecosystem multifunctionality (indicated by total and averaged energy fluxes) by ∼30% and energy across most trophic levels in EcM tree communities, while it shifted food webs from fast (such as bacterial-dominated) to slow (such as fungal-dominated) channels in AM tree communities. Tree diversity primarily impacted energy fluxes through belowground communities and strengthened the coupling of above- and belowground food webs, with increasing importance of belowground prey for predators at the soil surface and above the ground. These findings highlight that tree diversity and mycorrhizal types drive above- and belowground ecosystem functioning via belowground energy fluxes.
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Affiliation(s)
- Huimin Yi
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstraße, Leipzig 04103, Germany; Institute of Biology, Leipzig University, Puschstraße, Leipzig 04103, Germany.
| | - Olga Ferlian
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstraße, Leipzig 04103, Germany; Institute of Biology, Leipzig University, Puschstraße, Leipzig 04103, Germany
| | - Benoit Gauzens
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstraße, Leipzig 04103, Germany; Institute of Biodiversity, Friedrich Schiller University Jena, Hans-Knöll-Straße, Jena 07745, Germany
| | - Roberto Rebollo
- Department of Environmental Systems Science, ETH Zürich, Schmelzbergstraße, Zurich 8092, Switzerland
| | - Stefan Scheu
- J.F. Blumenbach Institute of Zoology and Anthropology, University of Göttingen, Untere Karspüle, Göttingen 37073, Germany; Centre of Biodiversity and Sustainable Land Use, University of Göttingen, Büsgenweg, Göttingen 37077, Germany
| | - Angelos Amyntas
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstraße, Leipzig 04103, Germany; Institute of Biodiversity, Friedrich Schiller University Jena, Hans-Knöll-Straße, Jena 07745, Germany
| | - Marcel Ciobanu
- Institute of Biological Research, National Institute for Research and Development for Biological Sciences, Republicii Street, Cluj-Napoca 400015, Romania
| | - Anton Potapov
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstraße, Leipzig 04103, Germany; Senckenberg Museum of Natural History Görlitz, Am Museum, Görlitz 02826, Germany; International Institute Zittau, TUD Dresden University of Technology, Markt, Zittau 02763, Germany
| | - Jörg-Alfred Salamon
- Institute of Ecology and Evolution & Field Station Schapen, University of Veterinary Medicine Hannover, Bünteweg, Hannover 30559, Germany
| | - Nico Eisenhauer
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstraße, Leipzig 04103, Germany; Institute of Biology, Leipzig University, Puschstraße, Leipzig 04103, Germany
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Shi J, Pang S, Hao X, Liu H, Zhuang L, Wang Z. Effects of gerbil disturbance on the ecological stoichiometric characteristics and nutrient uptake and utilization of H. ammodendron. PeerJ 2025; 13:e19287. [PMID: 40260191 PMCID: PMC12011012 DOI: 10.7717/peerj.19287] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2024] [Accepted: 03/18/2025] [Indexed: 04/23/2025] Open
Abstract
Rodent activity is an important factor that affects the growth and development of Haloxylon ammodendron. Studying the effect of rodent disturbance on plant ecological stoichiometric ratios helps evaluate the mechanism by which rodent disturbance affects plant growth and development. In this study, H. ammodendron, a dominant plant, and the gerbil, a typical rodent in the Gurbantunggut Desert, were selected as research objects. By measuring the biomass, root soil , and C: N: P ecostoichiometric ratios of the assimilated branches of H. ammodendron at different growth phases, the impact of great gerbil disturbance on the biomass, ecostoichiometric ratios, and nutrient uptake and use of H. ammodendron were investigated at different growth stages. The results showed that the gerbil disturbance increased the biomass of the aboveground part of the adult H. ammodendron. Gerbil disturbance also increased the soil N/P around the roots during the growth stage and the assimilation branch when the plants were middle-aged. In addition, this disturbance decreased the C/N value. The photosynthetic nitrogen use efficiency (PNUE) and photosynthetic phosphorus use efficiency (PPUE) of H. ammodendron during various growth periods decreased, and the absorption of total nitrogen (TN) in the soil decreased. However, soil total potassium (TK) absorption increased. The soil TN absorption capacity was weakened by gerbil disturbance. Meanwhile, the TK absorption capacity was enhanced, and the biomass of adult H. ammodendron increased. PNUE and PPUE of H. ammodendron were decreased by gerbil interference. In this study, the influence of gerbil disturbance on nutrient absorption by H. ammodendron and use of H. ammodendron was determined. This has provided a baseline for further studies on the coexistence mechanisms of gerbils and H. ammodendron.
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Affiliation(s)
- Jinshun Shi
- College of Life Sciences, Shihezi University, Shihezi, Xinjiang, China
| | - Shuyue Pang
- College of Life Sciences, Shihezi University, Shihezi, Xinjiang, China
| | - Xingming Hao
- Chinese Academy of Sciences, Xinjiang Institute of Ecology and Geography, Wulumuqi, Xinjiang, China
| | - Hongling Liu
- Chengdu Normal University, College of Chemistry and Life Science, Chengdu, Sichuan, China
| | - Li Zhuang
- College of Life Sciences, Shihezi University, Shihezi, Xinjiang, China
| | - Zhongke Wang
- College of Life Sciences, Shihezi University, Shihezi, Xinjiang, China
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Delgado-Baquerizo M, Eldridge DJ, Liu YR, Liu ZW, Coleine C, Trivedi P. Soil biodiversity and function under global change. PLoS Biol 2025; 23:e3003093. [PMID: 40146744 DOI: 10.1371/journal.pbio.3003093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Revised: 03/28/2025] [Indexed: 03/29/2025] Open
Abstract
Soil organisms represent the most abundant and diverse organisms on the planet and support almost every ecosystem function we know, and thus impact our daily lives. Some of these impacts have been well-documented, such as the role of soil organisms in regulating soil fertility and carbon sequestration; processes that have direct implications for essential ecosystem services including food security and climate change mitigation. Moreover, soil biodiversity also plays a critical role in supporting other aspects from One Health-the combined health of humans, animals, and the environment-to the conservation of historic structures such as monuments. Unfortunately, soil biodiversity is also highly vulnerable to a growing number of stressors associated with global environmental change. Understanding how and when soil biodiversity supports these functions, and how it will adapt to changing environmental conditions, is crucial for conserving soils and maintaining soil processes for future generations. In this Essay, we discuss the fundamental importance of soil biodiversity for supporting multiple ecosystem services and One Health, and further highlight essential knowledge gaps that need to be addressed to conserve soil biodiversity for the next generations.
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Affiliation(s)
- Manuel Delgado-Baquerizo
- Laboratorio de Biodiversidad y Funcionamiento Ecosistémico, Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS), Consejo Superior de Investigaciones Científicas (CSIC), Sevilla, Spain
| | - David J Eldridge
- Centre for Ecosystem Science, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, Australia
| | - Yu-Rong Liu
- State Key Laboratory of Agricultural Microbiology and College of Resources and Environment, Huazhong Agricultural University, Wuhan, China
| | - Zhong-Wen Liu
- State Key Laboratory of Agricultural Microbiology and College of Resources and Environment, Huazhong Agricultural University, Wuhan, China
| | - Claudia Coleine
- Department of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy
| | - Pankaj Trivedi
- Microbiome Network and Department of Agricultural Biology, Colorado State University, Fort Collins, Colorado, United States of America
- Department of Plant and Soil Science, Institute of Genomics for Crop Abiotic Stress Tolerance (IGCAST), Texas Tech University, Lubbock, Texas, United States of America
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Chertov O, Frolov P, Shanin V, Priputina I, Bykhovets S, Geraskina A. A Model of the Ectomycorrhizal Contribution to Forest Soil C and N Dynamics and Tree N Supply Within the EFIMOD3 Model System. PLANTS (BASEL, SWITZERLAND) 2025; 14:417. [PMID: 39942979 PMCID: PMC11820865 DOI: 10.3390/plants14030417] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/12/2024] [Revised: 01/21/2025] [Accepted: 01/28/2025] [Indexed: 02/16/2025]
Abstract
Mycorrhizal symbiosis has been the focus of research for more than a century due to the positive effect of fungi on the growth of the majority of woody plants. The extramatrical mycelium (EMM) of ectomycorrhiza (EMR) accounts for up to one-third of the total soil microbial biomass, whereas litter from this short-living pool accounts for 60% of the total litterfall mass in forest ecosystems. The functioning of EMR improves the nitrogen (N) nutrition of trees and thus contributes to the carbon (C) balance of forest soils. The model presented here is an attempt to describe these EMR functions quantitatively. It calculates the growth of EMM and the subsequent "mining" of additional nitrogen from recalcitrant soil organic matter (SOM) for EMR growth, with the associated formation of "dissolved soil carbon". The decomposition of EMM litter is carried out by all organisms in the soil food webs, forming available NH4+ in the first phase and then solid-phase by-products (excretes) as a new labile SOM pool. These substances are the feedback that determines the positive role of EMR symbiosis for forest vegetation. A sensitivity analysis revealed a leading role of the C:N ratio of biotic components in the dynamics of EMM. The model validation showed a satisfactory agreement between simulated and observed data in relation to EMM respiration in larch forest plantations of different ages. Model testing within the EFIMOD3 model system allowed a quantitative assessment of the contribution of different components to forest soil and ecosystem respiration. The validation and testing of this model demonstrated the adequacy of the theoretical background used in this model, with a fast EMM decomposition cycle by all soil biota of the food webs and without direct resource exchange between plants and fungi.
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Affiliation(s)
- Oleg Chertov
- Center for Forest Ecology and Productivity of the Russian Academy of Sciences, Profsoyuznaya st., 84/32, bld. 14, 117997 Moscow, Russia; (V.S.); (A.G.)
| | - Pavel Frolov
- Institute of Physicochemical and Biological Problems in Soil Science, Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, Institutskaya st., 2, 142290 Pushchino, Russia; (P.F.); (I.P.); (S.B.)
| | - Vladimir Shanin
- Center for Forest Ecology and Productivity of the Russian Academy of Sciences, Profsoyuznaya st., 84/32, bld. 14, 117997 Moscow, Russia; (V.S.); (A.G.)
- Institute of Physicochemical and Biological Problems in Soil Science, Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, Institutskaya st., 2, 142290 Pushchino, Russia; (P.F.); (I.P.); (S.B.)
| | - Irina Priputina
- Institute of Physicochemical and Biological Problems in Soil Science, Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, Institutskaya st., 2, 142290 Pushchino, Russia; (P.F.); (I.P.); (S.B.)
| | - Sergey Bykhovets
- Institute of Physicochemical and Biological Problems in Soil Science, Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, Institutskaya st., 2, 142290 Pushchino, Russia; (P.F.); (I.P.); (S.B.)
| | - Anna Geraskina
- Center for Forest Ecology and Productivity of the Russian Academy of Sciences, Profsoyuznaya st., 84/32, bld. 14, 117997 Moscow, Russia; (V.S.); (A.G.)
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Ni B, Lin D, Cai T, Du S, Zhu D. Soil Plastisphere Reinforces the Adverse Effect of Combined Pollutant Exposure on the Microfood Web. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2024; 58:21641-21652. [PMID: 39579385 DOI: 10.1021/acs.est.4c07773] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/25/2024]
Abstract
Microbial interactions form microfood webs, crucial for ecological functions. The steady state of these webs, shaped by cooperation and competition among trophic levels, prevents pathogen proliferation and invasion, maintaining soil health. Combined pollutants pose a widespread environmental issue, exerting significant pressure on microfood webs. However, understanding how these webs respond to combined pollutants in soil plastispheres, an emerging niche, remains limited. This study explores trophic interactions among bacteria, fungi, and protists, examining their effects on potential pathogens in three soil types amended with Cu or disinfectant, along with their plastispheres, using a microcosm experiment. Pollutant exposure disrupts trophic-level interactions through bottom-up and top-down regulation in soils and plastispheres, respectively. Microfood web network topology parameters prove more sensitive to pollutant stress than indicators from a single trophic-level community composition. Combined exposure causes greater disruption to the microfood web than exposure to a single pollutant (Cu or didecyl dimethylammonium chloride (DDAC)). Plastisphere reinforces negative impacts of combined pollutant exposure on the microfood web network, escalating potential pathogenic bacteria. Overall, this study deepens our understanding of microfood web responses under pollutant pressure in soil plastispheres and provides valuable insights for health risk assessments of soil combined pollutants.
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Affiliation(s)
- Bang Ni
- Key Laboratory of Urban Environment and Health, Ningbo Urban Environment Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, Peoples Republic of China
- Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, Peoples Republic of China
| | - Da Lin
- Key Laboratory of Urban Environment and Health, Ningbo Urban Environment Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, Peoples Republic of China
- University of Chinese Academy of Sciences, Beijing 100049, Peoples Republic of China
| | - Tiangui Cai
- Key Laboratory of Urban Environment and Health, Ningbo Urban Environment Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, Peoples Republic of China
- Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, Peoples Republic of China
| | - Shuai Du
- Key Laboratory of Urban Environment and Health, Ningbo Urban Environment Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, Peoples Republic of China
- Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, Peoples Republic of China
| | - Dong Zhu
- Key Laboratory of Urban Environment and Health, Ningbo Urban Environment Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, Peoples Republic of China
- Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, Peoples Republic of China
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Yu Q, He C, Anthony MA, Schmid B, Gessler A, Yang C, Zhang D, Ni X, Feng Y, Zhu J, Zhu B, Wang S, Ji C, Tang Z, Wu J, Smith P, Liu L, Li MH, Schaub M, Fang J. Decoupled responses of plants and soil biota to global change across the world's land ecosystems. Nat Commun 2024; 15:10369. [PMID: 39609374 PMCID: PMC11605088 DOI: 10.1038/s41467-024-54304-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2024] [Accepted: 11/05/2024] [Indexed: 11/30/2024] Open
Abstract
Understanding the concurrent responses of aboveground and belowground biota compartments to global changes is crucial for the maintenance of ecosystem functions and biodiversity conservation. We conduct a comprehensive analysis synthesizing data from 13,209 single observations and 3223 pairwise observations from 1166 publications across the world terrestrial ecosystems to examine the responses of plants and soil organisms and their synchronization. We find that global change factors (GCFs) generally promote plant biomass but decreased plant species diversity. In comparison, the responses of belowground soil biota to GCFs are more variable and harder to predict. The analysis of the paired aboveground and belowground observations demonstrate that responses of plants and soil organisms to GCFs are decoupled among diverse groups of soil organisms for different biomes. Our study highlights the importance of integrative research on the aboveground-belowground system for improving predictions regarding the consequences of global environmental change.
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Affiliation(s)
- Qingshui Yu
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing, China
- Swiss Federal Institute of Forest, Snow and Landscape Research WSL, Zürcherstrasse 111, Birmensdorf, Switzerland
| | - Chenqi He
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing, China
| | - Mark A Anthony
- Swiss Federal Institute of Forest, Snow and Landscape Research WSL, Zürcherstrasse 111, Birmensdorf, Switzerland
- Center for Microbiology & Environmental Systems Science, Division of Terrestrial Ecosystem Research, University of Vienna, Djerassiplatz 1, Vienna, Austria
| | - Bernhard Schmid
- Department of Geography, Remotes Sensing Laboratories, University of Zürich, Winterthurerstrasse 190, 8057, Zürich, Switzerland
| | - Arthur Gessler
- Swiss Federal Institute of Forest, Snow and Landscape Research WSL, Zürcherstrasse 111, Birmensdorf, Switzerland
- Department of Environmental Systems Science, Institute of Terrestrial Ecosystems, ETH Zürich, Zürich, Switzerland
| | - Chen Yang
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing, China
| | - Danhua Zhang
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing, China
| | - Xiaofeng Ni
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing, China
| | - Yuhao Feng
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing, China
| | - Jiangling Zhu
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing, China
| | - Biao Zhu
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing, China
| | - Shaopeng Wang
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing, China
| | - Chengjun Ji
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing, China
| | - Zhiyao Tang
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing, China
| | - Jin Wu
- Research Area of Ecology and Biodiversity, School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China
| | - Pete Smith
- Institute of Biological and Environmental Sciences, School of Biological Sciences, University of Aberdeen, Aberdeen, UK
| | - Lingli Liu
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Xiangshan, Beijing, China
| | - Mai-He Li
- Swiss Federal Institute of Forest, Snow and Landscape Research WSL, Zürcherstrasse 111, Birmensdorf, Switzerland
- Key Laboratory of Geographical Processes and Ecological Security in Changbai Mountains, Ministry of Education, School of Geographical Sciences, Northeast Normal University, Changchun, Jilin, China
- College of Life Science, Hebei University, Baoding, Hebei, China
| | - Marcus Schaub
- Swiss Federal Institute of Forest, Snow and Landscape Research WSL, Zürcherstrasse 111, Birmensdorf, Switzerland
| | - Jingyun Fang
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing, China.
- College of Ecology and Environmental Sciences, Yunnan University, Chenggong, Kunming, China.
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Neuenkamp L, García de León D, Hamer U, Hölzel N, McGale E, Hannula SE. Comprehensive tools for ecological restoration of soils foster sustainable use and resilience of agricultural land. Commun Biol 2024; 7:1577. [PMID: 39592854 PMCID: PMC11599581 DOI: 10.1038/s42003-024-07275-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2023] [Accepted: 11/15/2024] [Indexed: 11/28/2024] Open
Abstract
Soils are the backbone of terrestrial ecosystems, underpinning their biodiversity and functioning. They are also key to agricultural production and ecosystem development. Although focus on effective and profitable food production has led to severely degraded soils, the tools and standards for restoration strategies in agricultural soils are still largely underdeveloped. In this review, we summarize recent developments in ecological restoration practice for soils, evaluate whether these are in line with ecological theory, identify where they could be improved, and contextualize these to agricultural soil restoration. We identify restoration actions and success indicators that may best foster sustainable use of agricultural soils while also increasing their multifunctionality, that is their ability to simultaneously supply multiple ecosystem services including provisioning food and feed. Lastly, we explore actions available to improve soil health and focus on tool and indicator implementation. Calls for reductions in provisioning services, such as yield production, commonly used in ecological restoration practices conflict most directly with wider soil-ecosystem-service-focused restoration actions, including supporting and regulating services. Comprehensive restoration actions harnessing the interdependence of multiple soil properties, including contribution to vegetative yield, appear to be most efficient in agricultural settings with a central role of soil biodiversity in ecosystem service provisioning.
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Affiliation(s)
- L Neuenkamp
- University of Münster, Münster, Germany.
- University of Alicante, Alicante, Spain.
| | | | - U Hamer
- University of Münster, Münster, Germany
| | - N Hölzel
- University of Münster, Münster, Germany
| | - E McGale
- University of Lausanne, Lausanne, Switzerland
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10
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Wang X, Deng W, Hu H, Jia X, Chen J, Fang P, Cheng C, Zhang S, Jiang X, Ding D, Ma B. Seasonal variations in soil microbial community co-occurrence network complexity respond differently to field-simulated warming experiments in a northern subtropical forest. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 949:174692. [PMID: 39002597 DOI: 10.1016/j.scitotenv.2024.174692] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2024] [Revised: 07/08/2024] [Accepted: 07/09/2024] [Indexed: 07/15/2024]
Abstract
Global warming may reshape seasonal changes in microbial community diversity and co-occurrence network patterns, with significant implications for terrestrial ecosystem function. We conducted a 2-year in situ field simulation of the effects of warming on the seasonal dynamics of soil microbial communities in a northern subtropical Quercus acutissima forest. Our study revealed that warming had no significant effect on the richness or diversity of soil bacteria or fungi in the growing season, whereas different warming gradients had different effects on their diversity in the nongrowing season. Warming also changed the microbial community structure, increasing the abundance of some thermophilic microbial species and decreasing the abundance of some symbiotrophic microorganisms. The co-occurrence network analysis of the microbial community showed that warming decreased the complexity of the intradomain network in the soil bacterial community in the growing and nongrowing seasons but increased it in the fungal community. Moreover, increasing warming temperatures increased the complexity of the interdomain network between bacteria and fungi in the growing season but decreased it in the nongrowing season, and the keystone species in the interdomain network changed with warming. Warming also reduced the proportion of positive microbial community interactions, indicating that warming reduced the mutualism, commensalism, and neutralism of microorganisms as they adapted to soil environmental stress. The factors affecting the fungal community varied considerably across warming gradients, with the bacterial community being significantly affected by soil temperature, MBC, NO3--N and NH4+-N, moreover, SOC and TN significantly affected fungal communities in the 4 °C warming treatment. These results suggest that warming increases seasonal differences in the diversity and complexity of soil microbial communities in the northern subtropical region, significantly influencing soil dynamic processes regulating forest ecosystems under global warming.
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Affiliation(s)
- Xia Wang
- Co-Innovation Center for the Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Soil and Water Conservation and Ecological Restoration in Jiangsu Province, Nanjing 210037, China
| | - Wenbin Deng
- Co-Innovation Center for the Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Soil and Water Conservation and Ecological Restoration in Jiangsu Province, Nanjing 210037, China
| | - Haibo Hu
- Co-Innovation Center for the Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Soil and Water Conservation and Ecological Restoration in Jiangsu Province, Nanjing 210037, China.
| | - Xichuan Jia
- Co-Innovation Center for the Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Soil and Water Conservation and Ecological Restoration in Jiangsu Province, Nanjing 210037, China
| | - Jianyu Chen
- Co-Innovation Center for the Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Soil and Water Conservation and Ecological Restoration in Jiangsu Province, Nanjing 210037, China
| | - Pei Fang
- Co-Innovation Center for the Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Soil and Water Conservation and Ecological Restoration in Jiangsu Province, Nanjing 210037, China
| | - Can Cheng
- Co-Innovation Center for the Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Soil and Water Conservation and Ecological Restoration in Jiangsu Province, Nanjing 210037, China
| | - Shuai Zhang
- Co-Innovation Center for the Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Soil and Water Conservation and Ecological Restoration in Jiangsu Province, Nanjing 210037, China
| | - Xuyi Jiang
- Co-Innovation Center for the Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Soil and Water Conservation and Ecological Restoration in Jiangsu Province, Nanjing 210037, China
| | - Dongxia Ding
- Co-Innovation Center for the Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Soil and Water Conservation and Ecological Restoration in Jiangsu Province, Nanjing 210037, China
| | - Bing Ma
- Geological Environment Exploration Institute of Jiangsu Province, Nanjing 211102, China
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11
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Gutgesell M, McCann K, O'Connor R, Kc K, Fraser EDG, Moore JC, McMeans B, Donohue I, Bieg C, Ward C, Pauli B, Scott A, Gillam W, Gedalof Z, Hanner RH, Tunney T, Rooney N. The productivity-stability trade-off in global food systems. Nat Ecol Evol 2024; 8:2135-2149. [PMID: 39227681 DOI: 10.1038/s41559-024-02529-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2023] [Accepted: 07/29/2024] [Indexed: 09/05/2024]
Abstract
Historically, humans have managed food systems to maximize productivity. This pursuit has drastically modified terrestrial and aquatic ecosystems globally by reducing species diversity and body size while creating very productive, yet homogenized, environments. Such changes alter the structure and function of ecosystems in ways that ultimately erode their stability. This productivity-stability trade-off has largely been ignored in discussions around global food security. Here, we synthesize empirical and theoretical literature to demonstrate the existence of the productivity-stability trade-off and argue the need for its explicit incorporation in the sustainable management of food systems. We first explore the history of human management of food systems, its impacts on average body size within and across species and food web stability. We then demonstrate how reductions in body size are symptomatic of a broader biotic homogenization and rewiring of food webs. We show how this biotic homogenization decompartmentalizes interactions among energy channels and increases energy flux within the food web in ways that threaten their stability. We end by synthesizing large-scale ecological studies to demonstrate the prevalence of the productivity-stability trade-off. We conclude that management strategies promoting landscape heterogeneity and maintenance of key food web structures are critical to sustainable food production.
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Affiliation(s)
| | | | | | - Krishna Kc
- University of Guelph, Guelph, Ontario, Canada
| | | | - John C Moore
- Colorado State University, Fort Collins, CO, USA
| | - Bailey McMeans
- University of Toronto Mississauga, Mississauga, Ontario, Canada
| | | | | | | | - Brett Pauli
- University of Guelph, Guelph, Ontario, Canada
| | - Alexa Scott
- University of Guelph, Guelph, Ontario, Canada
| | | | | | | | - Tyler Tunney
- Fisheries and Oceans Canada, Moncton, New Brunswick, Canada
| | - Neil Rooney
- University of Guelph, Guelph, Ontario, Canada
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12
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Ye B, Xiong Q, Yang J, Huang Z, Huang J, He J, Liu L, Xia M, Liu Y. Adoption of region-specific diets in China can help achieve gains in health and environmental sustainability. NATURE FOOD 2024; 5:764-774. [PMID: 39215095 DOI: 10.1038/s43016-024-01038-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Accepted: 07/30/2024] [Indexed: 09/04/2024]
Abstract
The vast heterogeneity in dietary practices across China has led to profound regional disparities in health and environment. To address this issue, we developed a region-specific reference diet (RRD) that is better aligned with Chinese culinary traditions, affordable, sparing of natural and environmental resources, and contributes to health. The adoption of the RRD has proven to be a viable solution to facilitate a rapid transition towards a healthy and environmentally sustainable diet across the country when compared to dietary guidelines from the World Health Organization, the EAT-Lancet Commission and the Chinese Nutrition Society. The RRD improved health in all regions and resulted in reductions of all five environmental impacts measured. Given China's huge population and its major impact on global sustainability, the widespread adoption of the RRD would not only yield substantial health benefits domestically, but also contribute significantly to global food security and sustainability efforts.
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Affiliation(s)
- Bingqi Ye
- Guangdong Provincial Key Laboratory of Food, Nutrition, and Health, and Department of Statistics and Epidemiology, School of Public Health, Sun Yat-sen University, Guangdong, People's Republic of China
| | - Qianling Xiong
- Guangdong Provincial Key Laboratory of Food, Nutrition, and Health, Department of Nutrition, School of Public Health, Sun Yat-sen University, Guangdong, People's Republic of China
| | - Jialu Yang
- Guangdong Provincial Key Laboratory of Food, Nutrition, and Health, Department of Nutrition, School of Public Health, Sun Yat-sen University, Guangdong, People's Republic of China
| | - Zhihao Huang
- Guangdong Provincial Key Laboratory of Food, Nutrition, and Health, Department of Nutrition, School of Public Health, Sun Yat-sen University, Guangdong, People's Republic of China
| | - Jingyi Huang
- Guangdong Provincial Key Laboratory of Food, Nutrition, and Health, Department of Nutrition, School of Public Health, Sun Yat-sen University, Guangdong, People's Republic of China
| | - Jialin He
- Guangdong Provincial Key Laboratory of Food, Nutrition, and Health, Department of Nutrition, School of Public Health, Sun Yat-sen University, Guangdong, People's Republic of China
| | - Ludi Liu
- Guangdong Provincial Key Laboratory of Food, Nutrition, and Health, and Department of Statistics and Epidemiology, School of Public Health, Sun Yat-sen University, Guangdong, People's Republic of China
| | - Min Xia
- Guangdong Provincial Key Laboratory of Food, Nutrition, and Health, Department of Nutrition, School of Public Health, Sun Yat-sen University, Guangdong, People's Republic of China.
| | - Yan Liu
- Guangdong Provincial Key Laboratory of Food, Nutrition, and Health, Department of Nutrition, School of Public Health, Sun Yat-sen University, Guangdong, People's Republic of China.
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13
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Jia P, Tian M, Zhang B, Wu X, He X, Zhang W. Habitat changes due to glacial freezing and melting reshape microbial networks. ENVIRONMENT INTERNATIONAL 2024; 189:108788. [PMID: 38838490 DOI: 10.1016/j.envint.2024.108788] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2024] [Revised: 05/15/2024] [Accepted: 05/29/2024] [Indexed: 06/07/2024]
Abstract
The phenomenon of glacial freezing and thawing involves microbial sequestration, release, and colonization, which has the potential to impact ecosystem functioning through changes in microbial diversity and interactions. In this study, we examined the structural features of microbial communities of the Dongkemadi glacier, including bacteria, fungi, and archaea, in four distinct glacial environments (snow, ice, meltwater, and frontier soil). The sequestration, release, and colonization of glacial microbes have been found to significantly impact the diversity and structure of glacial microbial communities, as well as the complexity of microbial networks. Specifically, the complexity of bacterial networks has been observed to increase in a sequential manner during these processes. Utilizing the Inter-Domain Ecological Network approach, researchers have further explored the cross-trophic interactions among bacteria, fungi, and archaea. The complexity of the bacteria-fungi-archaea network exhibited a sequential increase due to the processes of sequestration, release, and colonization of glacial microbes. The release and colonization of glacial microbes led to a shift in the role of archaea as key species within the network. Additionally, our findings suggest that the hierarchical interactions among various microorganisms contributed to the heightened complexity of the bacteria-fungi-archaea network. The primary constituents of the glacial microbial ecosystem are unclassified species associated with the Polaromonas. It is noteworthy that various key species in glacial ecosystems are influenced by the distinct environmental factors. Moreover, our findings suggest that key species are not significantly depleted in response to abrupt alterations in individual environmental factors, shedding light on the dynamics of microbial cross-trophic interactions within glacial ecosystems.
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Affiliation(s)
- Puchao Jia
- Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; Key Laboratory of Extreme Environmental Microbial Resources and Engineering of Gansu Province, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Mao Tian
- Key Laboratory of Extreme Environmental Microbial Resources and Engineering of Gansu Province, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; Key Laboratory of Cryospheric Sciences and Frozen Soil Engineering, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Binglin Zhang
- Key Laboratory of Extreme Environmental Microbial Resources and Engineering of Gansu Province, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; Key Laboratory of Cryospheric Sciences and Frozen Soil Engineering, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China
| | - Xiukun Wu
- Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; Key Laboratory of Extreme Environmental Microbial Resources and Engineering of Gansu Province, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China
| | - Xiaobo He
- Key Laboratory of Cryospheric Sciences and Frozen Soil Engineering, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; Tanggula Mountain Cryosphere and Environment Observation and Research Station of Tibet Autonomous Region, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China
| | - Wei Zhang
- Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; Key Laboratory of Extreme Environmental Microbial Resources and Engineering of Gansu Province, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China.
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14
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Mohan I, Joshi B, Pathania D, Dhar S, Bhau BS. Phytobial remediation advances and application of omics and artificial intelligence: a review. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:37988-38021. [PMID: 38780844 DOI: 10.1007/s11356-024-33690-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Accepted: 05/11/2024] [Indexed: 05/25/2024]
Abstract
Industrialization and urbanization increased the use of chemicals in agriculture, vehicular emissions, etc., and spoiled all environmental sectors. It causes various problems among living beings at multiple levels and concentrations. Phytoremediation and microbial association are emerging as a potential method for removing heavy metals and other contaminants from soil. The treatment uses plant physiology and metabolism to remove or clean up various soil contaminants efficiently. In recent years, omics and artificial intelligence have been seen as powerful techniques for phytobial remediation. Recently, AI and modeling are used to analyze large data generated by omics technologies. Machine learning algorithms can be used to develop predictive models that can help guide the selection of the most appropriate plant and plant growth-promoting rhizobacteria combination that is most effective at remediation. In this review, emphasis is given to the phytoremediation techniques being explored worldwide in soil contamination.
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Affiliation(s)
- Indica Mohan
- Department of Environmental Sciences, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India
- Department of Botany, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India
| | - Babita Joshi
- Plant Molecular Genetics Laboratory, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, U.P., 226001, India
| | - Deepak Pathania
- Department of Environmental Sciences, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India
- Department of Botany, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India
| | - Sunil Dhar
- Department of Environmental Sciences, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India
- Department of Botany, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India
| | - Brijmohan Singh Bhau
- Department of Botany, Central University of Jammu, Rahya-Suchani, Bagla, District Samba, Jammu and Kashmir, 181143, India.
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15
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Dong WJ, Xu MD, Yang XW, Yang XM, Long XZ, Han XY, Cui LY, Tong Q. Rice straw ash and amphibian health: A deep dive into microbiota changes and potential ecological consequences. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 926:171651. [PMID: 38490417 DOI: 10.1016/j.scitotenv.2024.171651] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2023] [Revised: 03/05/2024] [Accepted: 03/09/2024] [Indexed: 03/17/2024]
Abstract
Rice straw is burned as a result of agricultural practices and technical limitations, generating significant volumes of ash that might have environmental and ecological consequences; however, the effects on organisms have not been researched. Amphibians depend on their gut and skin microbiomes. Ash exposure may cause inflammation and changes in microbial diversity and function in frogs' skin and gut microbiota due to its chemical composition and physical presence, but the implications remain unclear. Rana dybowskii were exposed to five aqueous extracts of ashes (AEA) concentrations for 30 days to study survival, metal concentrations, and microbial diversity, analyzing the microbiota of the cutaneous and gut microbiota using Illumina sequencing. Dominant elements in ash: K > Ca > Mg > Na > Al > Fe. In AEA, K > Na > Ca > Mg > As > Cu. Increased AEA concentrations significantly reduced frog survival. Skin microbiota alpha diversity varied significantly among all treatment groups, but not gut microbiota. Skin microbiota differed significantly across treatments via Bray-Curtis and weighted UniFrac; gut microbiota was only affected by Bray-Curtis. Skin microbiota varied significantly with AEA levels in Proteobacteria, Bacteroidetes, Actinobacteria, and Firmicutes, while the gut microbiota's dominant phyla, Firmicutes, Bacteroidetes, and Proteobacteria, remained consistent across all groups. Lastly, the functional prediction showed that the skin microbiota had big differences in how it worked and looked, which were linked to different health and environmental adaptation pathways. The gut microbiota, on the other hand, had smaller differences. In conclusion, AEA exposure affects R. dybowskii survival and skin microbiota diversity, indicating potential health and ecological impacts, with less effect on gut microbiota.
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Affiliation(s)
- Wen-Jing Dong
- School of Biology and Agriculture, Jiamusi University, Jiamusi 154007, China
| | - Ming-da Xu
- School of Biology and Agriculture, Jiamusi University, Jiamusi 154007, China
| | - Xue-Wen Yang
- School of Biology and Agriculture, Jiamusi University, Jiamusi 154007, China
| | - Xiu-Mei Yang
- College of Veterinary Medicine, Northeast Agricultural University, Harbin 150030, China
| | - Xin-Zhou Long
- School of Biology and Agriculture, Jiamusi University, Jiamusi 154007, China
| | - Xiao-Yun Han
- School of Biology and Agriculture, Jiamusi University, Jiamusi 154007, China
| | - Li-Yong Cui
- School of Biology and Agriculture, Jiamusi University, Jiamusi 154007, China
| | - Qing Tong
- School of Biology and Agriculture, Jiamusi University, Jiamusi 154007, China; College of Veterinary Medicine, Northeast Agricultural University, Harbin 150030, China.
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16
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Zheng B, Xiao Z, Liu J, Zhu Y, Shuai K, Chen X, Liu Y, Hu R, Peng G, Li J, Hu Y, Su Z, Fang M, Li J. Vertical differences in carbon metabolic diversity and dominant flora of soil bacterial communities in farmlands. Sci Rep 2024; 14:9445. [PMID: 38658691 PMCID: PMC11043072 DOI: 10.1038/s41598-024-60142-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2023] [Accepted: 04/19/2024] [Indexed: 04/26/2024] Open
Abstract
The carbon cycle in soil is significantly influenced by soil microbes. To investigate the vertical distribution of the dominant groups in agricultural soil and the carbon metabolic diversity of soil bacteria, 45 soil samples from the 0 ~ 50 cm soil layer in Hunan tobacco-rice multiple cropping farmland were collected in November 2017, and the carbon diversity of the soil bacterial community, bacterial community composition and soil physical and chemical properties were determined. The results showed that the carbon metabolic capabilities and functional diversity of the soil bacterial community decreased with depth. The three most widely used carbon sources for soil bacteria were carbohydrates, amino acids, and polymers. The dominant bacterial groups in surface soil (such as Chloroflexi, Acidobacteriota, and Bacteroidota) were significantly positively correlated with the carbon metabolism intensity. The alkali-hydrolysable nitrogen content, soil bulk density and carbon-nitrogen ratio were the key soil factors driving the differences in carbon metabolism of the soil bacterial communities in the different soil layers.
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Affiliation(s)
- Bufan Zheng
- Agronomy College, Hunan Agricultural University, Changsha, 410128, China
| | - Zhipeng Xiao
- Hunan Tobacco Monopoly Bureau, Changsha, 410004, China
| | - Jiaqi Liu
- Hubei Tobacco Industry Co., Ltd., Wuhan, 430040, China
| | - Yi Zhu
- Hunan Tobacco Monopoly Bureau, Changsha, 410004, China
| | - Kaifeng Shuai
- Hunan Tobacco Monopoly Bureau, Changsha, 410004, China
| | - Xiaye Chen
- Hunan Tobacco Monopoly Bureau, Changsha, 410004, China
| | - Yongjun Liu
- Hunan Tobacco Monopoly Bureau, Changsha, 410004, China
| | - Ruiwen Hu
- Agronomy College, Hunan Agricultural University, Changsha, 410128, China
| | - Guangjue Peng
- Agronomy College, Hunan Agricultural University, Changsha, 410128, China
| | - Junlin Li
- Guangxi Tobacco Industry Co., Ltd., Nanning, 530001, China
| | - Yichao Hu
- Guangxi Tobacco Industry Co., Ltd., Nanning, 530001, China
| | - Zan Su
- Guangxi Tobacco Industry Co., Ltd., Nanning, 530001, China.
| | - Ming Fang
- Hunan Tobacco Monopoly Bureau, Changsha, 410004, China.
| | - Juan Li
- Agronomy College, Hunan Agricultural University, Changsha, 410128, China.
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17
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Hu Z, Delgado-Baquerizo M, Fanin N, Chen X, Zhou Y, Du G, Hu F, Jiang L, Hu S, Liu M. Nutrient-induced acidification modulates soil biodiversity-function relationships. Nat Commun 2024; 15:2858. [PMID: 38570522 PMCID: PMC10991381 DOI: 10.1038/s41467-024-47323-3] [Citation(s) in RCA: 27] [Impact Index Per Article: 27.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2023] [Accepted: 03/26/2024] [Indexed: 04/05/2024] Open
Abstract
Nutrient enrichment is a major global change component that often disrupts the relationship between aboveground biodiversity and ecosystem functions by promoting species dominance, altering trophic interactions, and reducing ecosystem stability. Emerging evidence indicates that nutrient enrichment also reduces soil biodiversity and weakens the relationship between belowground biodiversity and ecosystem functions, but the underlying mechanisms remain largely unclear. Here, we explore the effects of nutrient enrichment on soil properties, soil biodiversity, and multiple ecosystem functions through a 13-year field experiment. We show that soil acidification induced by nutrient enrichment, rather than changes in mineral nutrient and carbon (C) availability, is the primary factor negatively affecting the relationship between soil diversity and ecosystem multifunctionality. Nitrogen and phosphorus additions significantly reduce soil pH, diversity of bacteria, fungi and nematodes, as well as an array of ecosystem functions related to C and nutrient cycling. Effects of nutrient enrichment on microbial diversity also have negative consequences at higher trophic levels on the diversity of microbivorous nematodes. These results indicate that nutrient-induced acidification can cascade up its impacts along the soil food webs and influence ecosystem functioning, providing novel insight into the mechanisms through which nutrient enrichment influences soil community and ecosystem properties.
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Affiliation(s)
- Zhengkun Hu
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, China
- Centre for Grassland Microbiome, State Key Laboratory of Herbage Improvement and Grassland Agro‑Ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020, China
| | - Manuel Delgado-Baquerizo
- Laboratorio de Biodiversidad y Funcionamiento Ecosistémico. Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS), CSIC, Av. Reina Mercedes 10, E-41012, Sevilla, Spain
| | - Nicolas Fanin
- INRAE, Bordeaux Sciences Agro, UMR 1391 ISPA, Villenave-d'Ornon, France
| | - Xiaoyun Chen
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Yan Zhou
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Guozhen Du
- College of Ecology, Lanzhou University, Lanzhou, 730000, China
| | - Feng Hu
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Lin Jiang
- School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, USA
| | - Shuijin Hu
- Department of Entomology & Plant Pathology, North Carolina State University, Raleigh, NC, USA
| | - Manqiang Liu
- Centre for Grassland Microbiome, State Key Laboratory of Herbage Improvement and Grassland Agro‑Ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020, China.
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18
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Wang C, Kuzyakov Y. Rhizosphere engineering for soil carbon sequestration. TRENDS IN PLANT SCIENCE 2024; 29:447-468. [PMID: 37867041 DOI: 10.1016/j.tplants.2023.09.015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2023] [Revised: 08/10/2023] [Accepted: 09/30/2023] [Indexed: 10/24/2023]
Abstract
The rhizosphere is the central hotspot of water and nutrient uptake by plants, rhizodeposition, microbial activities, and plant-soil-microbial interactions. The plasticity of plants offers possibilities to engineer the rhizosphere to mitigate climate change. We define rhizosphere engineering as targeted manipulation of plants, soil, microorganisms, and management to shift rhizosphere processes for specific aims [e.g., carbon (C) sequestration]. The rhizosphere components can be engineered by agronomic, physical, chemical, biological, and genomic approaches. These approaches increase plant productivity with a special focus on C inputs belowground, increase microbial necromass production, protect organic compounds and necromass by aggregation, and decrease C losses. Finally, we outline multifunctional options for rhizosphere engineering: how to boost C sequestration, increase soil health, and mitigate global change effects.
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Affiliation(s)
- Chaoqun Wang
- Biogeochemistry of Agroecosystems, University of Goettingen, 37077 Goettingen, Germany.
| | - Yakov Kuzyakov
- Department of Soil Science of Temperate Ecosystems, University of Goettingen, 37077 Goettingen, Germany.
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19
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Potapov AM, Drescher J, Darras K, Wenzel A, Janotta N, Nazarreta R, Kasmiatun, Laurent V, Mawan A, Utari EH, Pollierer MM, Rembold K, Widyastuti R, Buchori D, Hidayat P, Turner E, Grass I, Westphal C, Tscharntke T, Scheu S. Rainforest transformation reallocates energy from green to brown food webs. Nature 2024; 627:116-122. [PMID: 38355803 PMCID: PMC10917685 DOI: 10.1038/s41586-024-07083-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2022] [Accepted: 01/16/2024] [Indexed: 02/16/2024]
Abstract
Terrestrial animal biodiversity is increasingly being lost because of land-use change1,2. However, functional and energetic consequences aboveground and belowground and across trophic levels in megadiverse tropical ecosystems remain largely unknown. To fill this gap, we assessed changes in energy fluxes across 'green' aboveground (canopy arthropods and birds) and 'brown' belowground (soil arthropods and earthworms) animal food webs in tropical rainforests and plantations in Sumatra, Indonesia. Our results showed that most of the energy in rainforests is channelled to the belowground animal food web. Oil palm and rubber plantations had similar or, in the case of rubber agroforest, higher total animal energy fluxes compared to rainforest but the key energetic nodes were distinctly different: in rainforest more than 90% of the total animal energy flux was channelled by arthropods in soil and canopy, whereas in plantations more than 50% of the energy was allocated to annelids (earthworms). Land-use change led to a consistent decline in multitrophic energy flux aboveground, whereas belowground food webs responded with reduced energy flux to higher trophic levels, down to -90%, and with shifts from slow (fungal) to fast (bacterial) energy channels and from faeces production towards consumption of soil organic matter. This coincides with previously reported soil carbon stock depletion3. Here we show that well-documented animal biodiversity declines with tropical land-use change4-6 are associated with vast energetic and functional restructuring in food webs across aboveground and belowground ecosystem compartments.
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Affiliation(s)
- Anton M Potapov
- Animal Ecology, University of Göttingen, Göttingen, Germany.
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.
- Insitute of Biology, University of Leipzig, Leipzig, Germany.
| | | | - Kevin Darras
- Agroecology, University of Göttingen, Göttingen, Germany
| | - Arne Wenzel
- Functional Agrobiodiversity, University of Göttingen, Göttingen, Germany
| | - Noah Janotta
- Animal Ecology, University of Göttingen, Göttingen, Germany
| | - Rizky Nazarreta
- Department of Plant Protection, IPB University, Bogor, Indonesia
| | - Kasmiatun
- Department of Plant Protection, IPB University, Bogor, Indonesia
| | | | - Amanda Mawan
- Animal Ecology, University of Göttingen, Göttingen, Germany
| | - Endah H Utari
- Department of Plant Protection, IPB University, Bogor, Indonesia
| | | | - Katja Rembold
- Botanical Garden of University of Bern, University of Bern, Bern, Switzerland
- Biodiversity, Macroecology & Biogeography, University of Göttingen, Göttingen, Germany
| | | | - Damayanti Buchori
- Department of Plant Protection, IPB University, Bogor, Indonesia
- Centre for Transdisciplinary and Sustainability Sciences, IPB University, Bogor, Indonesia
| | - Purnama Hidayat
- Department of Plant Protection, IPB University, Bogor, Indonesia
| | - Edgar Turner
- Department of Zoology, University of Cambridge, Cambridge, UK
| | - Ingo Grass
- Ecology of Tropical Agricultural Systems, University of Hohenheim, Stuttgart, Germany
| | - Catrin Westphal
- Functional Agrobiodiversity, University of Göttingen, Göttingen, Germany
| | | | - Stefan Scheu
- Animal Ecology, University of Göttingen, Göttingen, Germany
- Centre of Biodiversity and Sustainable Land Use, University of Göttigen, Göttingen, Germany
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20
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Amarasinghe A, Chen C, Van Zwieten L, Rashti MR. The role of edaphic variables and management practices in regulating soil microbial resilience to drought - A meta-analysis. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 912:169544. [PMID: 38141972 DOI: 10.1016/j.scitotenv.2023.169544] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Revised: 11/27/2023] [Accepted: 12/18/2023] [Indexed: 12/25/2023]
Abstract
Environmental disturbances such as drought can impact soil health and the resistance (ability to withstand environmental stress) and resilience (ability to recover functional and structural integrity after stress) of soil microbial functional activities. A paucity of information exists on the impact of drought on soil microbiome and how soil biological systems respond to and demonstrate resilience to drought stress. To address this, we conducted a systematic review and meta-analysis (using only laboratory studies) to assess the response of soil microbial biomass and respiration to drought stress across agriculture, forest, and grassland ecosystems. The meta-analysis revealed an overall negative response of microbial biomass in resistance (-31.6 %) and resilience (-0.3 %) to drought, suggesting a decrease in soil microbial biomass content. Soil microbial respiration also showed a negative response in resistance to drought stress indicating a decrease in soil microbial respiration in agriculture (-17.5 %), forest (-64.0 %), and grassland (-65.5 %) ecosystems. However, it showed a positive response in resilience to drought, suggesting an effective recovery in microbial respiration post-drought. Soil organic carbon (SOC), clay content, and pH were the main regulating factors of the responses of soil microbial biomass and respiration to drought. In agriculture ecosystem, soil pH was primarily correlated with soil microbial respiration resistance and resilience to drought, potentially influenced by frequent land preparation and fertilizer applications, while in forest ecosystem SOC, clay content, and pH significantly impacted microbial biomass and respiration resistance and resilience. In grassland ecosystem, SOC was strongly associated with biomass resilience to drought. The impact of drought stress on soil microbiome showed different patterns in natural and agriculture ecosystems, and the magnitude of microbial functional responses regulated by soil intrinsic properties. This study highlighted the importance of understanding the role of soil properties in shaping microbial responses to drought stress for better ecosystem management.
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Affiliation(s)
- Apsara Amarasinghe
- Australian Rivers Institute, School of Environment and Science, Griffith University, 170 Kessels Road, Nathan, QLD 4111, Australia
| | - Chengrong Chen
- Australian Rivers Institute, School of Environment and Science, Griffith University, 170 Kessels Road, Nathan, QLD 4111, Australia
| | - Lukas Van Zwieten
- Australian Rivers Institute, School of Environment and Science, Griffith University, 170 Kessels Road, Nathan, QLD 4111, Australia; NSW Department of Primary Industries, Wollongbar, New South Wales, Australia
| | - Mehran Rezaei Rashti
- Australian Rivers Institute, School of Environment and Science, Griffith University, 170 Kessels Road, Nathan, QLD 4111, Australia.
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21
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Zhu L, Luan L, Chen Y, Wang X, Zhou S, Zou W, Han X, Duan Y, Zhu B, Li Y, Liu W, Zhou J, Zhang J, Jiang Y, Sun B. Community assembly of organisms regulates soil microbial functional potential through dual mechanisms. GLOBAL CHANGE BIOLOGY 2024; 30:e17160. [PMID: 38379454 DOI: 10.1111/gcb.17160] [Citation(s) in RCA: 28] [Impact Index Per Article: 28.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Revised: 01/03/2024] [Accepted: 01/04/2024] [Indexed: 02/22/2024]
Abstract
Unraveling the influence of community assembly processes on soil ecosystem functioning presents a major challenge in the field of theoretical ecology, as it has received limited attention. Here, we used a series of long-term experiments spanning over 25 years to explore the assembly processes of bacterial, fungal, protist, and nematode communities using high-throughput sequencing. We characterized the soil microbial functional potential by the abundance of microbial genes associated with carbon, nitrogen, phosphorus, and sulfur cycling using GeoChip-based functional gene profiling, and determined how the assembly processes of organism groups regulate soil microbial functional potential through community diversity and network stability. Our results indicated that balanced fertilization (NPK) treatment improved the stochastic assembly of bacterial, fungal, and protist communities compared to phosphorus-deficient fertilization (NK) treatment. However, there was a nonsignificant increase in the normalized stochasticity ratio of the nematode community in response to fertilization across sites. Our findings emphasized that soil environmental factors influenced the assembly processes of the biotic community, which regulated soil microbial functional potential through dual mechanisms. One mechanism indicated that the high phosphorus levels and low soil nutrient stoichiometry may increase the stochasticity of bacterial, fungal, and protist communities and the determinism of the nematode community under NPK treatment, ultimately enhancing soil microbial functional potential by reinforcing the network stability of the biotic community. The other mechanism indicated that the low phosphorus levels and high soil nutrient stoichiometry may increase the stochastic process of the bacterial community and the determinism of the fungal, protist, and nematode communities under NK treatment, thereby enhancing soil microbial functional potential by improving the β-diversity of the biotic community. Taken together, these results provide valuable insights into the mechanisms underlying the assembly processes of the biotic community that regulate ecosystem functioning.
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Affiliation(s)
- Lingyue Zhu
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, China
- College of Geography and Environmental Sciences, Zhejiang Normal University, Jinhua, China
| | - Lu Luan
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, China
| | - Yan Chen
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, China
| | - Xiaoyue Wang
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, China
| | - Shungui Zhou
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Wenxiu Zou
- Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, China
| | - Xiaori Han
- College of Land and Environment, Shenyang Agricultural University, Shengyang, China
| | - Yinghua Duan
- Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Bo Zhu
- Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, China
| | - Yan Li
- Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, China
| | - Wenzhao Liu
- Institute of Soil and Water Conservation, Chinese Academy of Sciences and Ministry of Water Resources, Yangling, China
| | - Jizhong Zhou
- Institute for Environmental Genomics, University of Oklahoma, Norman, Oklahoma, USA
| | - Jiabao Zhang
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, China
| | - Yuji Jiang
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, China
| | - Bo Sun
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, China
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22
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Botella C, Gaüzère P, O'Connor L, Ohlmann M, Renaud J, Dou Y, Graham CH, Verburg PH, Maiorano L, Thuiller W. Land-use intensity influences European tetrapod food webs. GLOBAL CHANGE BIOLOGY 2024; 30:e17167. [PMID: 38348640 DOI: 10.1111/gcb.17167] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Revised: 12/29/2023] [Accepted: 01/08/2024] [Indexed: 02/15/2024]
Abstract
Land use intensification favours particular trophic groups which can induce architectural changes in food webs. These changes can impact ecosystem functions, services, stability and resilience. However, the imprint of land management intensity on food-web architecture has rarely been characterized across large spatial extent and various land uses. We investigated the influence of land management intensity on six facets of food-web architecture, namely apex and basal species proportions, connectance, omnivory, trophic chain lengths and compartmentalization, for 67,051 European terrestrial vertebrate communities. We also assessed the dependency of this influence of intensification on land use and climate. In addition to more commonly considered climatic factors, the architecture of food webs was notably influenced by land use and management intensity. Intensification tended to strongly lower the proportion of apex predators consistently across contexts. In general, intensification also tended to lower proportions of basal species, favoured mesopredators, decreased food webs compartmentalization whereas it increased their connectance. However, the response of food webs to intensification was different for some contexts. Intensification sharply decreased connectance in Mediterranean and Alpine settlements, and it increased basal tetrapod proportions and compartmentalization in Mediterranean forest and Atlantic croplands. Besides, intensive urbanization especially favoured longer trophic chains and lower omnivory. By favouring mesopredators in most contexts, intensification could undermine basal tetrapods, the cascading effects of which need to be assessed. Our results support the importance of protecting top predators where possible and raise questions about the long-term stability of food webs in the face of human-induced pressures.
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Affiliation(s)
- Christophe Botella
- Université Grenoble Alpes, Université Savoie Mont Blanc, CNRS, LECA, Grenoble, France
- Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University, Stellenbosch, South Africa
| | - Pierre Gaüzère
- Université Grenoble Alpes, Université Savoie Mont Blanc, CNRS, LECA, Grenoble, France
| | - Louise O'Connor
- Université Grenoble Alpes, Université Savoie Mont Blanc, CNRS, LECA, Grenoble, France
| | - Marc Ohlmann
- Université Grenoble Alpes, Université Savoie Mont Blanc, CNRS, LECA, Grenoble, France
| | - Julien Renaud
- Université Grenoble Alpes, Université Savoie Mont Blanc, CNRS, LECA, Grenoble, France
| | - Yue Dou
- Department of Natural Resources, Faculty of Geo-information Science and Earth Observation (ITC), University of Twente, Enschede, The Netherlands
- Institute for Environmental Studies, VU University Amsterdam, The Netherlands
| | | | - Peter H Verburg
- Institute for Environmental Studies, VU University Amsterdam, The Netherlands
- Swiss Federal Research Institute WSL, Birmensdorf, Switzerland
| | - Luigi Maiorano
- Department of Biology and Biotechnologies "Charles Darwin", Sapienza University of Rome, Roma, Italy
| | - Wilfried Thuiller
- Université Grenoble Alpes, Université Savoie Mont Blanc, CNRS, LECA, Grenoble, France
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23
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Lei J, Su Y, Jian S, Guo X, Yuan M, Bates CT, Shi ZJ, Li J, Su Y, Ning D, Wu L, Zhou J, Yang Y. Warming effects on grassland soil microbial communities are amplified in cool months. THE ISME JOURNAL 2024; 18:wrae088. [PMID: 38747385 PMCID: PMC11170927 DOI: 10.1093/ismejo/wrae088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Revised: 03/25/2024] [Accepted: 05/14/2024] [Indexed: 06/14/2024]
Abstract
Global warming modulates soil respiration (RS) via microbial decomposition, which is seasonally dependent. Yet, the magnitude and direction of this modulation remain unclear, partly owing to the lack of knowledge on how microorganisms respond to seasonal changes. Here, we investigated the temporal dynamics of soil microbial communities over 12 consecutive months under experimental warming in a tallgrass prairie ecosystem. The interplay between warming and time altered (P < 0.05) the taxonomic and functional compositions of microbial communities. During the cool months (January to February and October to December), warming induced a soil microbiome with a higher genomic potential for carbon decomposition, community-level ribosomal RNA operon (rrn) copy numbers, and microbial metabolic quotients, suggesting that warming stimulated fast-growing microorganisms that enhanced carbon decomposition. Modeling analyses further showed that warming reduced the temperature sensitivity of microbial carbon use efficiency (CUE) by 28.7% when monthly average temperature was low, resulting in lower microbial CUE and higher heterotrophic respiration (Rh) potentials. Structural equation modeling showed that warming modulated both Rh and RS directly by altering soil temperature and indirectly by influencing microbial community traits, soil moisture, nitrate content, soil pH, and gross primary productivity. The modulation of Rh by warming was more pronounced in cooler months compared to warmer ones. Together, our findings reveal distinct warming-induced effects on microbial functional traits in cool months, challenging the norm of soil sampling only in the peak growing season, and advancing our mechanistic understanding of the seasonal pattern of RS and Rh sensitivity to warming.
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Affiliation(s)
- Jiesi Lei
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China
| | - Yuanlong Su
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China
| | - Siyang Jian
- Institute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK 73019, United States
| | - Xue Guo
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Mengting Yuan
- Institute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK 73019, United States
- Department of Environmental Science, Policy, and Management, University of California, Berkeley, CA 94704, United States
| | - Colin T Bates
- Institute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK 73019, United States
| | - Zhou Jason Shi
- Institute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK 73019, United States
| | - Jiabao Li
- Key Laboratory of Environmental and Applied Microbiology, Chinese Academy of Sciences and Environmental Microbiology & Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610213, China
| | - Yifan Su
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China
| | - Daliang Ning
- Institute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK 73019, United States
| | - Liyou Wu
- Institute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK 73019, United States
| | - Jizhong Zhou
- Institute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK 73019, United States
- School of Civil Engineering and Environmental Sciences, University of Oklahoma, Norman, OK 73019, United States
- Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States
| | - Yunfeng Yang
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China
- Institute of Environment and Ecology, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen 518055, China
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24
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Fiore-Donno AM, Freudenthal J, Dahl MB, Rixen C, Urich T, Bonkowski M. Biotic interactions explain seasonal dynamics of the alpine soil microbiome. ISME COMMUNICATIONS 2024; 4:ycae028. [PMID: 38500704 PMCID: PMC10945362 DOI: 10.1093/ismeco/ycae028] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Revised: 01/24/2024] [Accepted: 02/22/2024] [Indexed: 03/20/2024]
Abstract
While it is acknowledged that alpine soil bacterial communities are primarily driven by season and elevation, there is no consensus on the factors influencing fungi and protists. Here we used a holistic approach of the microbiome to investigate the seasonal dynamics in alpine grasslands, focusing on soil food web interactions. We collected 158 soil samples along elevation transects from three mountains in the Alps, in spring during snowmelt and in the following summer. Using metatranscriptomics, we simultaneously assessed prokaryotic and eukaryotic communities, further classified into trophic guilds. Our findings reveal that the consumers' pressure increases from spring to summer, leading to more diverse and evenly distributed prey communities. Consequently, consumers effectively maintain the diverse soil bacterial and fungal communities essential for ecosystem functioning. Our research highlights the significance of biotic interactions in understanding the distribution and dynamics of alpine microbial communities.
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Affiliation(s)
- Anna Maria Fiore-Donno
- Institute of Zoology, University of Cologne, Zuelpicher Str. 47b, 50674 Cologne, Germany
| | - Jule Freudenthal
- Institute of Zoology, University of Cologne, Zuelpicher Str. 47b, 50674 Cologne, Germany
| | - Mathilde Borg Dahl
- Institute of Microbiology, University of Greifswald, 17489 Greifswald, Germany
| | - Christian Rixen
- WSL Institute for Snow and Avalanche Research SLF, 7260 Davos Dorf, Switzerland
- Climate Change, Extremes and Natural Hazards in Alpine Regions Research Centre CERC, 7260 Davos Dorf, Switzerland
| | - Tim Urich
- Institute of Microbiology, University of Greifswald, 17489 Greifswald, Germany
| | - Michael Bonkowski
- Institute of Zoology, University of Cologne, Zuelpicher Str. 47b, 50674 Cologne, Germany
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25
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Masebo N, Birhane E, Takele S, Belay Z, Lucena JJ, Pérez-Sanz A, Anjulo A. Diversity of Arbuscular Mycorrhizal fungi under different agroforestry practices in the drylands of Southern Ethiopia. BMC PLANT BIOLOGY 2023; 23:634. [PMID: 38066451 PMCID: PMC10709898 DOI: 10.1186/s12870-023-04645-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Accepted: 11/29/2023] [Indexed: 12/18/2023]
Abstract
The conversion of an agroforestry based agricultural system to a monocropping farming system influences the distribution and composition of arbuscular mycorrhizal fungi (AMF). The aim of this paper was to analyze AMF species diversity, spore density, and root colonization across different agroforestry practices (AFP) in southern Ethiopia. Soil and root samples were collected from homegarden, cropland, woodlot, and trees on soil and water conservation-based AFP. AMF spores were extracted from the soil and species diversity was evaluated using morphological analysis and root colonization from root samples. The AMF spore density, root colonization and composition were significantly different among the AFP (P < 0.05). In this study, 43 AMF morphotypes belonging to eleven genera were found, dominated by Acaulospora (32.56%), followed by Claroideoglomus (18.60%). Home gardens had the highest spore density (7641.5 spore100 g- 1 dry soil) and the lowest was recorded in croplands (683.6 spore100 g- 1 dry soil). Woodlot had the highest root colonization (54.75%), followed by homegarden (48.25%). The highest isolation frequency (63.63%) was recorded for Acaulospora scrobiculata. The distribution of AMF species and diversity were significantly related to soil total nitrogen and organic carbon. The homegarden and woodlot AFP were suitable for soil AMF reserve and conservation.
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Affiliation(s)
- Nebiyou Masebo
- Department of Natural Resource Management, Wolaita Sodo University, Wolaita Sodo, P.O. Box 128, Ethiopia
- Department of Biology, Arba Minch University, Arba Minch, P.O. Box 138, Arbaminch, Ethiopia
| | - Emiru Birhane
- Department of Land Resource Management and Environmental Protection, Mekelle University, P.O. Box 231, Tigray, Ethiopia.
- Institute of Climate and Society, Mekelle University, P. O. Box 231, Mekelle, Ethiopia.
- Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences (NMBU), Ås, Norway.
| | - Serekebirhan Takele
- Department of Biology, Arba Minch University, Arba Minch, P.O. Box 138, Arbaminch, Ethiopia
| | - Zerihun Belay
- Department of Applied Biology, Adama Science and Technology University, P.O. Box 231, Adama, Ethiopia
| | - Juan J Lucena
- Department of Agricultural Chemistry and Food Science, Autonomous University of Madrid, Madrid, 28049, Spain
| | - Araceli Pérez-Sanz
- Department of Agricultural Chemistry and Food Science, Universidad Autónoma de Madrid, Madrid, 28049, Spain
| | - Agena Anjulo
- Environment and Forest Research Institute, Addis Ababa, P.O. Box 231, Ethiopia
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26
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Bender SF, Schulz S, Martínez-Cuesta R, Laughlin RJ, Kublik S, Pfeiffer-Zakharova K, Vestergaard G, Hartman K, Parladé E, Römbke J, Watson CJ, Schloter M, van der Heijden MGA. Simplification of soil biota communities impairs nutrient recycling and enhances above- and belowground nitrogen losses. THE NEW PHYTOLOGIST 2023; 240:2020-2034. [PMID: 37700504 DOI: 10.1111/nph.19252] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Accepted: 08/18/2023] [Indexed: 09/14/2023]
Abstract
Agriculture is a major source of nutrient pollution, posing a threat to the earth system functioning. Factors determining the nutrient use efficiency of plant-soil systems need to be identified to develop strategies to reduce nutrient losses while ensuring crop productivity. The potential of soil biota to tighten nutrient cycles by improving plant nutrition and reducing soil nutrient losses is still poorly understood. We manipulated soil biota communities in outdoor lysimeters, planted maize, continuously collected leachates, and measured N2 O- and N2 -gas emissions after a fertilization pulse to test whether differences in soil biota communities affected nutrient recycling and N losses. Lysimeters with strongly simplified soil biota communities showed reduced crop N (-20%) and P (-58%) uptake, strongly increased N leaching losses (+65%), and gaseous emissions (+97%) of N2 O and N2 . Soil metagenomic analyses revealed differences in the abundance of genes responsible for nutrient uptake, nitrate reduction, and denitrification that helped explain the observed nutrient losses. Soil biota are major drivers of nutrient cycling and reductions in the diversity or abundance of certain groups (e.g. through land-use intensification) can disrupt nutrient cycling, reduce agricultural productivity and nutrient use efficiency, and exacerbate environmental pollution and global warming.
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Affiliation(s)
- S Franz Bender
- Plant Soil Interactions, Division Agroecology and Environment, Agroscope, Reckenholzstrasse 191, CH-8046, Zürich, Switzerland
- Department of Plant and Microbial Biology, University of Zürich, Zollikerstrasse 107, CH-8008, Zürich, Switzerland
| | - Stefanie Schulz
- Research Unit for Comparative Microbiome Analysis (COMI), Helmholtz Zentrum München, Ingolstädter Landstraße 1, D-85764, Neuherberg, Germany
| | - Rubén Martínez-Cuesta
- Research Unit for Comparative Microbiome Analysis (COMI), Helmholtz Zentrum München, Ingolstädter Landstraße 1, D-85764, Neuherberg, Germany
- Technical University of Munich, Chair for Environmental Microbiology, Emil-Ramann-Straße 2, D-85354, Freising, Germany
| | - Ronald J Laughlin
- Agri-Environment Branch, Agri-Food & Biosciences Institute, Belfast, BT9 5PX, UK
| | - Susanne Kublik
- Research Unit for Comparative Microbiome Analysis (COMI), Helmholtz Zentrum München, Ingolstädter Landstraße 1, D-85764, Neuherberg, Germany
| | - Kristina Pfeiffer-Zakharova
- Research Unit for Comparative Microbiome Analysis (COMI), Helmholtz Zentrum München, Ingolstädter Landstraße 1, D-85764, Neuherberg, Germany
| | - Gisle Vestergaard
- Research Unit for Comparative Microbiome Analysis (COMI), Helmholtz Zentrum München, Ingolstädter Landstraße 1, D-85764, Neuherberg, Germany
- Section for Bioinformatics, Department of Health Technology, Technical University of Denmark, DK-2800, Lyngby, Denmark
| | - Kyle Hartman
- Plant Soil Interactions, Division Agroecology and Environment, Agroscope, Reckenholzstrasse 191, CH-8046, Zürich, Switzerland
| | - Eloi Parladé
- Departament de Genètica i Microbiologia, Universitat Autònoma de Barcelona, 08193, Bellaterra, Spain
| | - Jörg Römbke
- ECT Ökotoxikologie GmbH, Böttgerstr. 2-14, D-65439, Flörsheim, Germany
| | - Catherine J Watson
- Agri-Environment Branch, Agri-Food & Biosciences Institute, Belfast, BT9 5PX, UK
| | - Michael Schloter
- Research Unit for Comparative Microbiome Analysis (COMI), Helmholtz Zentrum München, Ingolstädter Landstraße 1, D-85764, Neuherberg, Germany
- Technical University of Munich, Chair for Environmental Microbiology, Emil-Ramann-Straße 2, D-85354, Freising, Germany
| | - Marcel G A van der Heijden
- Plant Soil Interactions, Division Agroecology and Environment, Agroscope, Reckenholzstrasse 191, CH-8046, Zürich, Switzerland
- Department of Plant and Microbial Biology, University of Zürich, Zollikerstrasse 107, CH-8008, Zürich, Switzerland
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Yao H, Li Z, Geisen S, Qiao Z, Breed MF, Sun X. Degree of urbanization and vegetation type shape soil biodiversity in city parks. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 899:166437. [PMID: 37604369 DOI: 10.1016/j.scitotenv.2023.166437] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Revised: 07/28/2023] [Accepted: 08/18/2023] [Indexed: 08/23/2023]
Abstract
Urbanization negatively impacts aboveground biodiversity, such as bird and insect communities. City parks can reduce these negative impacts by providing important habitat. However, it remains poorly understood how the degree of urbanization and vegetation types within city parks (e.g., lawns, woodland) impact soil biodiversity. Here we investigated the impact of the degree of urbanization (urban vs. suburban) and vegetation type (lawn, shrub-lawn, tree-lawn and tree-shrub mixtures) on soil biodiversity in parkland systems. We used eDNA metabarcoding to characterize soil biodiversity of bacteria, fungi, protists, nematodes, meso- and macrofauna across park vegetation types in urban and suburban regions in Xiamen, China. We observed a strong effect of the degree of urbanization on the richness of different soil biota groups, with higher species richness of protists and meso/macrofauna in urban compared to suburban areas, while the richness of bacteria and fungi did not differ, and the difference of nematode richness depended on vegetation type. At the functional level, increased degree of urbanization associated with greater species richness of bacterivores, plant pathogens and animal parasites. These urbanization effects were at least partly modulated by higher soil phosphorous levels in urban compared to suburban sites. Also, the vegetation type impacted soil biodiversity, particularly fungal richness, with the richness of pathogenic and saprotrophic fungi increasing from lawn to tree-shrub mixtures. Tree-shrub mixtures also had the highest connectedness between biotas and lowest variation in the soil community structure. Overall, we show that soil biodiversity is strongly linked to the degree of urbanization, with overall richness increasing with urbanization, especially in bacterivores, plant pathogens and animal parasites. Targeted management of vegetation types in urban areas should provide a useful way to help mitigate the negative effect of urbanization on soil biodiversity.
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Affiliation(s)
- Haifeng Yao
- Key Laboratory of Urban Environment and Health, Ningbo Observation and Research Station, Fujian Key Laboratory of Watershed Ecology, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China; University of Chinese Academy of Sciences, Beijing 100049, China; Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, China; Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China.
| | - Zhipeng Li
- Key Laboratory of Urban Environment and Health, Ningbo Observation and Research Station, Fujian Key Laboratory of Watershed Ecology, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China; Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, China.
| | - Stefan Geisen
- Laboratory of Nematology, Department of Plant Sciences, Wageningen University & Research, 6700 ES Wageningen, the Netherlands.
| | - Zhihong Qiao
- University of Chinese Academy of Sciences, Beijing 100049, China; Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China.
| | - Martin F Breed
- College of Science and Engineering, Flinders University, Bedford Park, SA 5042, Australia.
| | - Xin Sun
- Key Laboratory of Urban Environment and Health, Ningbo Observation and Research Station, Fujian Key Laboratory of Watershed Ecology, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China; Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, China.
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Liu S, Plaza C, Ochoa-Hueso R, Trivedi C, Wang J, Trivedi P, Zhou G, Piñeiro J, Martins CSC, Singh BK, Delgado-Baquerizo M. Litter and soil biodiversity jointly drive ecosystem functions. GLOBAL CHANGE BIOLOGY 2023; 29:6276-6285. [PMID: 37578170 DOI: 10.1111/gcb.16913] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2023] [Revised: 07/31/2023] [Accepted: 08/01/2023] [Indexed: 08/15/2023]
Abstract
The decomposition of litter and the supply of nutrients into and from the soil are two fundamental processes through which the above- and belowground world interact. Microbial biodiversity, and especially that of decomposers, plays a key role in these processes by helping litter decomposition. Yet the relative contribution of litter diversity and soil biodiversity in supporting multiple ecosystem services remains virtually unknown. Here we conducted a mesocosm experiment where leaf litter and soil biodiversity were manipulated to investigate their influence on plant productivity, litter decomposition, soil respiration, and enzymatic activity in the littersphere. We showed that both leaf litter diversity and soil microbial diversity (richness and community composition) independently contributed to explain multiple ecosystem functions. Fungal saprobes community composition was especially important for supporting ecosystem multifunctionality (EMF), plant production, litter decomposition, and activity of soil phosphatase when compared with bacteria or other fungal functional groups and litter species richness. Moreover, leaf litter diversity and soil microbial diversity exerted previously undescribed and significantly interactive effects on EMF and multiple individual ecosystem functions, such as litter decomposition and plant production. Together, our work provides experimental evidence supporting the independent and interactive roles of litter and belowground soil biodiversity to maintain ecosystem functions and multiple services.
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Affiliation(s)
- Shengen Liu
- College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, China
- Yunnan Key Laboratory of Plateau Wetland Conservation, Restoration and Ecological Services, Kunming, China
- Laboratorio de Biodiversidad y Funcionamiento Ecosistémico, Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS), CSIC, Sevilla, Spain
| | - César Plaza
- Instituto de Ciencias Agrarias (ICA), CSIC, Madrid, Spain
| | - Raúl Ochoa-Hueso
- Department of Biology, IVAGRO, University of Cádiz, Campus de Excelencia Internacional Agroalimentario (CeiA3), Cádiz, Spain
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
| | - Chanda Trivedi
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
| | - Juntao Wang
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
| | - Pankaj Trivedi
- Microbiome Network and Department of Agricultural Biology, Colorado State University, Fort Collins, Colorado, USA
| | - Guiyao Zhou
- Laboratorio de Biodiversidad y Funcionamiento Ecosistémico, Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS), CSIC, Sevilla, Spain
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
| | - Juan Piñeiro
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
- ETSI Montes, Forestal y del Medio Natural, Universidad Politécnica de Madrid, Madrid, Spain
| | - Catarina S C Martins
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
| | - Brajesh K Singh
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
- Global Centre for Land-Based Innovation, Western Sydney University, Penrith, New South Wales, Australia
| | - Manuel Delgado-Baquerizo
- Laboratorio de Biodiversidad y Funcionamiento Ecosistémico, Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS), CSIC, Sevilla, Spain
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29
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Roth SW, Griffiths NA, Kolka RK, Oleheiser KC, Carrell AA, Klingeman DM, Seibert A, Chanton JP, Hanson PJ, Schadt CW. Elevated temperature alters microbial communities, but not decomposition rates, during 3 years of in situ peat decomposition. mSystems 2023; 8:e0033723. [PMID: 37819069 PMCID: PMC10654087 DOI: 10.1128/msystems.00337-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2023] [Accepted: 08/29/2023] [Indexed: 10/13/2023] Open
Abstract
IMPORTANCE Microbial community changes in response to climate change drivers have the potential to alter the trajectory of important ecosystem functions. In this paper, we show that while microbial communities in peatland systems responded to manipulations of temperature and CO2 concentrations, these changes were not associated with similar responses in peat decomposition rates over 3 years. It is unclear however from our current studies whether this functional resiliency over 3 years will continue over the longer time scales relevant to peatland ecosystem functions.
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Affiliation(s)
- Spencer W. Roth
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
| | - Natalie A. Griffiths
- Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
- Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
| | - Randall K. Kolka
- Northern Research Station, USDA Forest Service, Grand Rapids, Minnesota, USA
| | - Keith C. Oleheiser
- Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
- Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
| | - Alyssa A. Carrell
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
| | - Dawn M. Klingeman
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
| | - Angela Seibert
- Department of Geosciences, Boise State University, Boise, Idaho, USA
| | - Jeffrey P. Chanton
- Department of Earth, Ocean, and Atmospheric Science, Florida State University, Tallahassee, Florida, USA
| | - Paul J. Hanson
- Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
- Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
| | - Christopher W. Schadt
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
- Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
- Department of Microbiology, University of Tennessee, Knoxville, Tennessee, USA
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30
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Jiang R, Wang M, Chen W. Heavy metal pollution triggers a shift from bacteria-based to fungi-based soil micro-food web: Evidence from an abandoned mining-smelting area. JOURNAL OF HAZARDOUS MATERIALS 2023; 459:132164. [PMID: 37598513 DOI: 10.1016/j.jhazmat.2023.132164] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Revised: 07/13/2023] [Accepted: 07/25/2023] [Indexed: 08/22/2023]
Abstract
Heavy metals pose significant threats to soil biota, ultimately disrupting soil micro-food web. However, no studies have yet elucidated the impact of heavy metals on soil micro-food web. In this study, we explored the response of bacteria, fungi, nematodes, and soil micro-food web along a gradient of heavy metals in an abandoned smelting-mining area. We found that bacteria responded strongly to heavy metals, whereas fungi showed greater resistance and tolerance. Nematodes responses were less apparent. With the increasing levels of heavy metal pollution, the importance of heavy metal-tolerant organisms in micro-food webs increased significantly. For instance, the keystone bacteria in soil micro-food web shifted from copiotrophic to oligotrophic types, while the keystone nematodes shifted from to bacterial-feeding (e.g., Eucephalobus) to fungal-feeding species (e.g., Ditylenchus). Additionally, elevated heavy metal concentrations increased the proportion of fungi (e.g., Mortierellomycota), intensifying their interactions with bacteria and nematodes and causing a shift from bacteria-based to fungi-based soil micro-food web. Furthermore, heavy metal contamination induced a more complex and stable soil micro-food web. Overall, we highlight the changes in soil micro-food web as a mechanism for coping with heavy metal stress. Our study provides valuable insights into how heavy metal pollution can cause shifts in soil micro-food webs and has critical implications for enhancing our understanding of the ecological consequences of environmental pollution at the ecosystem level.
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Affiliation(s)
- Rong Jiang
- State Key Laboratory of Urban and Regional Ecology, Research Centre for Eco-environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Meie Wang
- State Key Laboratory of Urban and Regional Ecology, Research Centre for Eco-environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049,China.
| | - Weiping Chen
- State Key Laboratory of Urban and Regional Ecology, Research Centre for Eco-environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049,China
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31
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Li Z, Sun L, Liu S, Lei P, Wang R, Li S, Gu Y. Interkingdom network analyses reveal microalgae and protostomes as keystone taxa involved in nutrient cycling in large freshwater lake sediment. FEMS Microbiol Ecol 2023; 99:fiad111. [PMID: 37715306 DOI: 10.1093/femsec/fiad111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Revised: 07/26/2023] [Accepted: 09/14/2023] [Indexed: 09/17/2023] Open
Abstract
Few studies have explored the role of interkingdom interactions between bacteria and microeukaryotes in nutrient cycling in lake ecosystems. We conducted sediment sampling from 40 locations covering Hongze Lake and analyzed their chemical properties. Intra- and interkingdom networks were constructed using 16S and 18S rRNA gene amplicon sequencing. Microeukaryotic intranetworks were more complex in spring than in autumn, while no clear variation in the complexity of bacterial intranetworks was found between autumn and spring. Larger and more complex bacterial-microeukaryotic bipartite networks emerged in spring than in autumn, correlated with lower carbon, nitrogen, and phosphorus levels in spring, likely resulting in intense microbial competition. Bacteria and microeukaryotes played different topological roles in interkingdom networks, with microeukaryotes contributing to the networks' greater complexity. Seven keystone modules were identified in spring and autumn nutrient cycling. Importantly, keystone taxa in these modules belonged to photoautotrophic microalgae or predatory protostomes, indicating that these organisms are key drivers in lake sediment nutrient cycling. Our results suggested that nutrient content variation in autumn and spring changes interkingdom networks' topological structure between bacteria and microeukaryotes. Microalgae and protostomes are essential in freshwater lake nutrient cycling and may be targeted to modulate nutrient cycling in large freshwater ecosystems.
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Affiliation(s)
- Zhidan Li
- College of Biological and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211816, P.R. China
| | - Liang Sun
- College of Food Science and Light Industry, Nanjing Tech University, Nanjing 211816, P.R. China
| | - Sijie Liu
- College of Food Science and Light Industry, Nanjing Tech University, Nanjing 211816, P.R. China
| | - Peng Lei
- College of Food Science and Light Industry, Nanjing Tech University, Nanjing 211816, P.R. China
| | - Rui Wang
- College of Food Science and Light Industry, Nanjing Tech University, Nanjing 211816, P.R. China
| | - Sha Li
- College of Food Science and Light Industry, Nanjing Tech University, Nanjing 211816, P.R. China
| | - Yian Gu
- College of Food Science and Light Industry, Nanjing Tech University, Nanjing 211816, P.R. China
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32
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Ali H, Muhammad Z, Majeed M, Aziz R, Khan A, Mangrio WM, Abdo HG, Almohamad H, Al Dughairi AA. Vegetation diversity pattern during spring season in relation to topographic and edaphic variables in sub-tropical zone. BOTANICAL STUDIES 2023; 64:25. [PMID: 37716923 PMCID: PMC10505133 DOI: 10.1186/s40529-023-00398-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2022] [Accepted: 09/05/2023] [Indexed: 09/18/2023]
Abstract
BACKGROUND The present study was conducted to explore the diversity pattern of spring vegetation under the influence of topographic and edaphic variables in sub-tropical zone, District Malakand. In the present vegetation study, 252 species of 80 families were recorded in the study area. It included 39 species of trees, 43 species of shrubs, 167 species of herbs and 3 climber species. As a whole, 12 communities were established on the basis of topographic and edaphic characteristics in 12 different stations. RESULTS The results of the present study revealed that all diversity indices (species diversity, evenness index, species richness index, maturity index) during spring showed that the communities in plains lying at lower altitudes had higher diversity while the communities formed at high altitudes had lower diversity. The results of the similarity index showed that there was low similarity (below 50%) amongst the communities in different stations. CONCLUSIONS It can be concluded that variations in topographic and edaphic factors affect species diversity and communities pattern.
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Affiliation(s)
- Hazrat Ali
- Department of Botany, University of Peshawar, Peshawar, Pakistan
| | - Zahir Muhammad
- Department of Botany, University of Peshawar, Peshawar, Pakistan
| | - Muhammad Majeed
- Department of Botany, University of Gujrat, Hafiz Hayat Campus, Gujrat, 50700, Punjab, Pakistan
| | - Robina Aziz
- Department of Botany, Government College, Women University Sialkot, Sialkot, 51310, Punjab, Pakistan
| | - Adam Khan
- Department of Botany, University of Lakki Marwat, Khyber Pakhtunkhwa, Pakistan
| | - Wali Muhammad Mangrio
- Department of Zoology, Faculty of Natural Sciences, Shah Abdul Latif University, Khairpur, 66111, Sindh, Pakistan
| | - Hazem Ghassan Abdo
- Geography Department, Faculty of Arts and Humanities, Tartous University, Tartous, Syria.
| | - Hussein Almohamad
- Department of Geography, College of Arabic Language and Social Studies, Qassim University, Buraydah, 51452, Saudi Arabia
| | - Ahmed Abdullah Al Dughairi
- Department of Geography, College of Arabic Language and Social Studies, Qassim University, Buraydah, 51452, Saudi Arabia
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33
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Liu M, Wang C, Zhu B. Drought Alleviates the Negative Effects of Microplastics on Soil Micro-Food Web Complexity and Stability. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2023. [PMID: 37471306 DOI: 10.1021/acs.est.3c01538] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/22/2023]
Abstract
Soil ecosystems are under considerable pressure due to anthropogenic factors, including microplastics (MPs) pollution and drought. However, little is known about the interactive effects of MPs and drought on soil organisms, especially soil micro-food web. We conducted a microcosm experiment with MPs pollution (including two types and two sizes of MPs) and drought to investigate their interaction effects on soil microbial, protist, and nematode communities in soil micro-food web. We found that MPs significantly decreased the complexity and stability of soil micro-food web, with greater negative effects of biodegradable and smaller-sized MPs than conventional and larger-sized MPs. Drought had negative effects on soil micro-food web in the non-MPs pollution soils while increasing the complexity and stability of soil micro-food web in the MPs pollution soils. Drought increased the proportion of negative correlations between bacteria and fungi in the biodegradable MPs soils while decreasing the proportion of negative correlations between protists and nematodes in the smaller-sized MPs soils. Our study reveals that drought may alleviate the negative effects of MPs on soil micro-food web by reducing competition among lower trophic levels in the biodegradable MPs pollution soils while reducing competition among higher trophic levels in the smaller-sized MPs pollution soils.
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Affiliation(s)
- Mengli Liu
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing 100871, China
| | - Chong Wang
- College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193, China
| | - Biao Zhu
- Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing 100871, China
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Liu J, Fang K, Kou Y, Xia R, He H, Zhao W, Liu Q. Variations in the soil micro-food web structure and its relationship with soil C and N mineralization during secondary succession of subalpine forests. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 879:163257. [PMID: 37011690 DOI: 10.1016/j.scitotenv.2023.163257] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 03/14/2023] [Accepted: 03/30/2023] [Indexed: 05/17/2023]
Abstract
The soil micro-food web is an important network of belowground trophic relationships and it participates directly and indirectly in soil ecological processes. In recent decades, the roles of the soil micro-food web in regulating ecosystem functions in grasslands and agroecosystems have received much attention. However, the variations in the soil micro-food web structure and its relationship with ecosystem functions during forest secondary succession remain unclear. In this study, we investigated how forest secondary succession affected the soil micro-food web (including soil microbes and nematodes) and soil carbon and nitrogen mineralization across a successional sequence of "grasslands - shrublands - broadleaf forests - coniferous forests" in a subalpine region of southwestern China. With forest successional development, the total soil microbial biomass and the biomass of each microbial group generally increased. The significant influences of forest succession on soil nematodes were mainly reflected in several trophic groups with high colonizer-persister values (particularly bacterivore3, herbivore5 and omnivore-predator5) that are sensitive to environmental disturbance. The increases in the connectance and nematode genus richness, diversity, and maturity index indicated an increasingly stable and complex soil micro-food web with forest succession, which was closely related to soil nutrients, particularly the soil carbon contents. Additionally, we found that the soil carbon and nitrogen mineralization rates also exhibited generally increasing trends during forest succession, which had significant positive correlations with the soil micro-food web composition and structure. The path analysis results indicated that the variances in ecosystem functions induced by forest succession were significantly determined by soil nutrients and soil microbial and nematode communities. Overall, these results suggested that forest succession enriched and stabilized the soil micro-food web and promoted ecosystem functions via the increase in soil nutrients, and the soil micro-food web played an important role in regulating ecosystem functions during forest succession.
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Affiliation(s)
- Jia Liu
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China
| | - Kai Fang
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China
| | - Yongping Kou
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China
| | - Ruixue Xia
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Heliang He
- College of Agriculture, Forestry and Food Engineering, Yibin University, Yibin 644007, China
| | - Wenqiang Zhao
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China.
| | - Qing Liu
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China.
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35
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Dai W, Slotsbo S, Xie L, Wang Y, Damgaard C, Holmstrup M. Increased daily temperature fluctuations exacerbate the toxicity of phenanthrene in Enchytraeus albidus (Enchytraeidae). THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 873:162403. [PMID: 36841403 DOI: 10.1016/j.scitotenv.2023.162403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2022] [Revised: 02/14/2023] [Accepted: 02/18/2023] [Indexed: 06/18/2023]
Abstract
Temperature variability in soils is expected to increase due to the more frequent occurrence of heat waves, putting species under thermal stress. In addition, organic pollutants such as polycyclic aromatic hydrocarbons (PAHs) are released into the environment due to anthropogenic activities. Both stressors negatively impact terrestrial organisms and may interact with each other. Here, we subjected the soil living enchytraeid, Enchytraeus albidus, to combined exposure to phenanthrene (PHE; 0, 10, 20, 40, and 80 mg kg-1 dry soil) and a range of temperature treatments (constant temperature (CT): 10, 15 and 20 °C; different mean temperature with the same daily temperature fluctuation (DTF-5): 10 ± 5, 15 ± 5 and 20 ± 5 °C; daily temperature fluctuation with the same mean, but different amplitudes (DTF-A): 20, 20 ± 2, 20 ± 5 and 20 ± 7 °C). We measured internal PHE concentration in adults and found that an increase in mean temperature significantly increased the internal PHE concentration. The production of juveniles was measured using a standardized test. We found a synergistic interaction between the temperature amplitude (DTF-A treatments) and PHE on the reproduction of E. albidus. The EC50 of reproduction decreased with increasing amplitude. These results show that the negative effects of PHE on E. albidus can be magnified if stressful temperatures are reached (although briefly) during diurnal fluctuations of soil temperature. Our results highlight the importance and inclusion of extreme thermal events in the risk assessment of pollutants.
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Affiliation(s)
- Wencai Dai
- College of Resources and Environment, Southwest University, Chongqing 400715, China; Section of Terrestrial Ecology, Department of Ecoscience, Aarhus University, C.F. Møllers Alle 4, 8000 Aarhus C, Denmark.
| | - Stine Slotsbo
- Section of Terrestrial Ecology, Department of Ecoscience, Aarhus University, C.F. Møllers Alle 4, 8000 Aarhus C, Denmark
| | - Liyan Xie
- Section of Terrestrial Ecology, Department of Ecoscience, Aarhus University, C.F. Møllers Alle 4, 8000 Aarhus C, Denmark
| | - Yang Wang
- Section of Terrestrial Ecology, Department of Ecoscience, Aarhus University, C.F. Møllers Alle 4, 8000 Aarhus C, Denmark
| | - Christian Damgaard
- Section of Terrestrial Ecology, Department of Ecoscience, Aarhus University, C.F. Møllers Alle 4, 8000 Aarhus C, Denmark
| | - Martin Holmstrup
- Section of Terrestrial Ecology, Department of Ecoscience, Aarhus University, C.F. Møllers Alle 4, 8000 Aarhus C, Denmark
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36
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Dai W, Slotsbo S, Holmstrup M, van Gestel CAM. Evaluation of life-history traits in Folsomia candida exposed to combined repeated mild heat shocks with phenanthrene. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:55132-55142. [PMID: 36884179 DOI: 10.1007/s11356-023-26230-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Accepted: 02/27/2023] [Indexed: 06/18/2023]
Abstract
Climate change increases the frequency and intensity of extreme weather events. In nature, organisms are often exposed to climatic stressors and contaminants simultaneously, and the effects of contaminants may be modified by climate change and vice versa. Here, the effects of repeated mild heat shocks (0-5 times, 30 °C for 6 h), alone or combined with phenanthrene (PHE) (80 mg kg-1 dry soil), on life-history traits of the springtail Folsomia candida were investigated. The survival, growth, maturation, and reproduction of single juvenile springtails were assessed over a period of 37 days. Increasing number of heat bouts or PHE exposure did not have significant negative effects on overall survival at the termination of the experiment, but the interaction between the two stressors led to complex interactions for the dynamics of survival during the test. Neither body growth nor time to first oviposition was influenced by heat or PHE, but a reduction of egg production with increasing number of heat bouts was observed, and there was an interaction between the two stressors. Further, a trade-off between the number of eggs produced and egg size was observed, indicating that females invested the same amount of energy in reproduction despite exposure to stressful temperature and PHE. These results indicate that egg production (in terms of the number of eggs) was a more sensitive indicator of the combined effects of mild heat shocks and PHE than growth, and there was a trade-off between survival and egg production.
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Affiliation(s)
- Wencai Dai
- College of Resources and Environment, Southwest University, Chongqing, 400715, China.
- Section of Terrestrial Ecology, Department of Ecoscience, Aarhus University, C.F. Møllers Alle 4-6, 8000, Aarhus, Denmark.
| | - Stine Slotsbo
- Section of Terrestrial Ecology, Department of Ecoscience, Aarhus University, C.F. Møllers Alle 4-6, 8000, Aarhus, Denmark
| | - Martin Holmstrup
- Section of Terrestrial Ecology, Department of Ecoscience, Aarhus University, C.F. Møllers Alle 4-6, 8000, Aarhus, Denmark
| | - Cornelis A M van Gestel
- Faculty of Science, Amsterdam Institute for Life and Environment (A-LIFE), Vrije Universiteit, De Boelelaan 1085, 1081 HV, Amsterdam, The Netherlands
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Losada M, Martínez Cortizas AM, Silvius KM, Varela S, Raab TK, Fragoso JM, Sobral M. Mammal and tree diversity accumulate different types of soil organic matter in the northern Amazon. iScience 2023; 26:106088. [PMID: 36915677 PMCID: PMC10006633 DOI: 10.1016/j.isci.2023.106088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2022] [Revised: 12/06/2022] [Accepted: 01/25/2023] [Indexed: 01/31/2023] Open
Abstract
Diversity of plants and animals influence soil carbon through their contributions to soil organic matter (SOM). However, we do not know whether mammal and tree communities affect SOM composition in the same manner. This question is relevant because not all forms of carbon are equally resistant to mineralization by microbes and thus, relevant to carbon storage. We analyzed the elemental and molecular composition of 401 soil samples, with relation to the species richness of 83 mammal and tree communities at a landscape scale across 4.8 million hectares in the northern Amazon. We found opposite effects of mammal and tree richness over SOM composition. Mammal diversity is related to SOM rich in nitrogen, sulfur and iron whereas tree diversity is related to SOM rich in aliphatic and carbonyl compounds. These results help us to better understand the role of biodiversity in the carbon cycle and its implications for climate change mitigation.
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Affiliation(s)
- María Losada
- CRETUS - EcoPast (GI-1553), Departmento de Edafoloxía e Química Agrícola, Facultade de Bioloxía, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
| | - Antonio M. Martínez Cortizas
- CRETUS - EcoPast (GI-1553), Departmento de Edafoloxía e Química Agrícola, Facultade de Bioloxía, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
- Bolin Centre for Climate Research, Stockholm University, 106 91 Stockholm, Sweden
| | - Kirsten M. Silvius
- Department of Forest Resources and Environmental Conservation, Virginia Tech University, Blacksburg, VA 24061, USA
| | - Sara Varela
- MAPAS Lab, Departamento de Ecoloxía e Bioloxía Animal, Universidade de Vigo, 36310 Vigo, Spain
| | - Ted K. Raab
- Carnegie Institution for Science, Deparment of Global Ecology, Stanford, CA 94305, USA
| | - Jose M.V. Fragoso
- Departamento de Zoologia, Universidade de Brasılia, Brasılia, DF 70910-900, Brazil
- Institute of Biodiversity Science and Sustainability, California Academy of Sciences, San Francisco, CA 94118, USA
| | - Mar Sobral
- CRETUS - EcoPast (GI-1553), Departmento de Edafoloxía e Química Agrícola, Facultade de Bioloxía, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
- Corresponding author
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Ma C, Nie R, Du G. Responses of Soil Collembolans to Land Degradation in a Black Soil Region in China. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2023; 20:4820. [PMID: 36981729 PMCID: PMC10048822 DOI: 10.3390/ijerph20064820] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Revised: 03/03/2023] [Accepted: 03/06/2023] [Indexed: 06/18/2023]
Abstract
Land degradation in black soil regions has a significant effect on belowground systems, and Collembolans can adequately indicate environmental changes in the soil. However, there is currently a knowledge gap in the literature regarding the responses of soil Collembolans to land degradation. In order to better understand this issue, in this study, a total of 180 soil Collembolan samples were collected from four habitats with varying degrees of land degradation in the Songnen Plain, namely a no land-degradation habitat (NLD), light land-degradation habitat (LLD), moderate land-degradation habitat (MLD) and severe land-degradation habitat (SLD). The results reveal that the different degrees of land degradation caused some differences in the taxonomic composition of the Collembolans; however, the majority of the Collembolan species are distributed relatively evenly. Proisotoma minima are always a dominant species during the study period. Seasonal variations are observed in the abundance, richness and diversity levels. In the severe land-degradation habitats (SLD), the abundance, richness, diversity and community complexity of the Collembolans are aways at the lowest levels. In addition, Proisotoma minima is negatively correlated with a majority of the species of Collembolans in the low levels of the land-degradation habitats, whereas they are positively correlated with most of the other species in the high levels. Epedaphic and euedaphic Collembolans responded to land degradation more obviously. The structural equation model (SEM) displays that soil Collembolan communities respond negatively to land degradation. Overall, our results provide implications that soil Collembolan communities are affected by land degradation, and that different taxa of soil Collembolans respond to degradation in numerous ways.
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Microbial Interactions Related to N 2O Emissions and Temperature Sensitivity from Rice Paddy Fields. mBio 2023; 14:e0326222. [PMID: 36719199 PMCID: PMC9973001 DOI: 10.1128/mbio.03262-22] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023] Open
Abstract
The soil microbiome is a driver of nitrous oxide (N2O) emissions in terrestrial ecosystems. Identifying the core microbiome of N2O emissions and its temperature sensitivity from trillions of soil microorganisms is a great challenge and is essential to improving the predictability of soil-climate feedback related to increasing temperature. Here, the integrated soil microbiome covering archaeal, bacterial, fungal, algal, and microfaunal communities was studied to disengage the potential linkage with its N2O emissions and its temperature sensitivity in paddy fields by hunting for core species pairs. The results showed that between-group interactions of core bacterial and archaeal members and the within-group interactions of core bacterial members jointly contributed to the N2O emissions and its temperature sensitivity. The contribution of between-group interactions (32 to 33%) was greater than that of within groups (10 to 18%). These results suggested that N2O emissions and their fluctuations related to climate warming are affected by the within- and between-group interactions of the soil microbiome. Our results help advance the knowledge on the importance of microbial keystone species and network associations in controlling N2O production and their responses to increasing temperature. IMPORTANCE Soil microorganisms drive emissions of nitrous oxide from soils; this is a powerful greenhouse gas and the dominant ozone-depleting agent. N2O emissions can be partly predicted from soil properties and specific microbial groups, whereas a possible role of below-ground microbial interactions has largely been overlooked. Here, the integrated soil microbiome covering archaeal, bacterial, fungal, algal, and microfaunal communities was studied to disengage the potential linkage with the N2O emissions and temperature sensitivity of the microbiome in paddy fields by hunting for core species pairs. The results showed that between-group interactions of core bacterial and archaeal members and the within-group interactions of core bacterial members jointly contributed to the N2O emissions. The contribution of between-group interactions (32 to 33%) was greater than that of within-group interactions (10 to 18%). Our results help advance the knowledge on the importance of microbial keystone species and interactions in controlling N2O production and their responses to increasing temperature.
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The fecal bacterial microbiome of the Kuhl's pipistrelle bat (Pipistrellus kuhlii) reflects landscape anthropogenic pressure. Anim Microbiome 2023; 5:7. [PMID: 36739423 PMCID: PMC9898988 DOI: 10.1186/s42523-023-00229-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Accepted: 02/01/2023] [Indexed: 02/06/2023] Open
Abstract
BACKGROUND Anthropogenic disturbance has the potential to negatively affect wildlife health by altering food availability and diet composition, increasing the exposure to agrochemicals, and intensifying the contact with humans, domestic animals, and their pathogens. However, the impact of these factors on the fecal microbiome composition of wildlife hosts and its link to host health modulation remains barely explored. Here we investigated the composition of the fecal bacterial microbiome of the insectivorous bat Kuhl's pipistrelle (Pipistrellus kuhlii) dwelling in four environmental contexts with different levels of anthropogenic pressure. We analyzed their microbiome composition, structure and diversity through full-length 16S rRNA metabarcoding using the nanopore long-read sequencer MinION™. We hypothesized that the bacterial community structure of fecal samples would vary across the different scenarios, showing a decreased diversity and richness in samples from disturbed ecosystems. RESULTS The fecal microbiomes of 31 bats from 4 scenarios were sequenced. A total of 4,829,302 reads were obtained with a taxonomic assignment percentage of 99.9% at genus level. Most abundant genera across all scenarios were Enterococcus, Escherichia/Shigella, Bacillus and Enterobacter. Alpha diversity varied significantly between the four scenarios (p < 0.05), showing the lowest Shannon index in bats from urban and intensive agriculture landscapes, while the highest alpha diversity value was found in near pristine landscapes. Beta diversity obtained by Bray-Curtis distance showed weak statistical differentiation of bacterial taxonomic profiles among scenarios. Furthermore, core community analysis showed that 1,293 genera were shared among localities. Differential abundance analyses showed that the highest differentially abundant taxa were found in near pristine landscapes, with the exception of the family Alcaligenaceae, which was also overrepresented in urban and intensive agriculture landscapes. CONCLUSIONS This study suggests that near pristine and undisturbed landscapes could promote a more resilient gut microbiome in wild populations of P. kuhlii. These results highlight the potential of the fecal microbiome as a non-invasive bioindicator to assess insectivorous bats' health and as a key element of landscape conservation strategies.
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Wahdan SFM, Ji L, Schädler M, Wu YT, Sansupa C, Tanunchai B, Buscot F, Purahong W. Future climate conditions accelerate wheat straw decomposition alongside altered microbial community composition, assembly patterns, and interaction networks. THE ISME JOURNAL 2023; 17:238-251. [PMID: 36352255 PMCID: PMC9860053 DOI: 10.1038/s41396-022-01336-2] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Revised: 10/12/2022] [Accepted: 10/13/2022] [Indexed: 11/11/2022]
Abstract
Although microbial decomposition of plant litter plays a crucial role in nutrient cycling and soil fertility, we know less about likely links of specific microbial traits and decomposition, especially in relation to climate change. We study here wheat straw decomposition under ambient and manipulated conditions simulating a future climate scenario (next 80 years) in agroecosystems, including decay rates, macronutrient dynamics, enzyme activity, and microbial communities. We show that future climate will accelerate straw decay rates only during the early phase of the decomposition process. Additionally, the projected climate change will increase the relative abundance of saprotrophic fungi in decomposing wheat straw. Moreover, the impact of future climate on microbial community assembly and molecular ecological networks of both bacteria and fungi will strongly depend on the decomposition phase. During the early phase of straw decomposition, stochastic processes dominated microbial assembly under ambient climate conditions, whereas deterministic processes highly dominated bacterial and fungal communities under simulated future climate conditions. In the later decomposition phase, similar assembly processes shaped the microbial communities under both climate scenarios. Furthermore, over the early phases of decomposition, simulated future climate enhanced the complexity of microbial interaction networks. We concluded that the impact of future climate on straw decay rate and associated microbial traits like assembly processes and inter-community interactions is restricted to the early phase of decomposition.
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Affiliation(s)
- Sara Fareed Mohamed Wahdan
- grid.7492.80000 0004 0492 3830Department of Soil Ecology, UFZ-Helmholtz Centre for Environmental Research, Halle (Saale), Germany ,grid.33003.330000 0000 9889 5690Department of Botany & Microbiology, Faculty of Science, Suez Canal University, Ismailia, Egypt
| | - Li Ji
- grid.7492.80000 0004 0492 3830Department of Soil Ecology, UFZ-Helmholtz Centre for Environmental Research, Halle (Saale), Germany ,grid.440660.00000 0004 1761 0083School of Forestry, Central South University of Forestry and Technology, Changsha, PR China
| | - Martin Schädler
- grid.421064.50000 0004 7470 3956German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany ,grid.7492.80000 0004 0492 3830Department of Community Ecology, UFZ-Helmholtz Centre for Environmental Research, Halle (Saale), Germany
| | - Yu-Ting Wu
- grid.412083.c0000 0000 9767 1257Department of Forestry, National Pingtung University of Science and Technology, Pingtung, Taiwan ,grid.412019.f0000 0000 9476 5696Department of Biomedical Science and Environmental Biology, Kaohsiung Medical University, Kaohsiung, Taiwan, ROC
| | - Chakriya Sansupa
- grid.7132.70000 0000 9039 7662Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, Thailand
| | - Benjawan Tanunchai
- grid.7492.80000 0004 0492 3830Department of Soil Ecology, UFZ-Helmholtz Centre for Environmental Research, Halle (Saale), Germany
| | - François Buscot
- grid.7492.80000 0004 0492 3830Department of Soil Ecology, UFZ-Helmholtz Centre for Environmental Research, Halle (Saale), Germany ,grid.421064.50000 0004 7470 3956German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
| | - Witoon Purahong
- grid.7492.80000 0004 0492 3830Department of Soil Ecology, UFZ-Helmholtz Centre for Environmental Research, Halle (Saale), Germany
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Hermans SM, Lear G, Case BS, Buckley HL. The soil microbiome: An essential, but neglected, component of regenerative agroecosystems. iScience 2023; 26:106028. [PMID: 36844455 PMCID: PMC9947323 DOI: 10.1016/j.isci.2023.106028] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023] Open
Abstract
Regenerative agriculture (RA) is gaining traction globally as an approach for meeting growing food demands while avoiding, or even remediating, the detrimental environmental consequences associated with conventional farming. Momentum is building for science to provide evidence for, or against, the putative ecosystem benefits of RA practices relative to conventional farming. In this perspective article, we advance the argument that consideration of the soil microbiome in RA research is crucial for disentangling the varied and complex relationships RA practices have with the biotic and abiotic environment, outline the expected changes in soil microbiomes under RA, and make recommendations for designing research that will answer the outstanding questions on the soil microbiome under RA. Ultimately, deeper insights into the role of microbial communities in RA soils will allow the development of biologically relevant monitoring tools which will support land managers in addressing the key environmental issues associated with agriculture.
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Affiliation(s)
- Syrie M. Hermans
- School of Science, Auckland University of Technology, 34 St Paul Street, Auckland 1010, New Zealand
| | - Gavin Lear
- School of Biological Sciences, University of Auckland, 3A Symonds Street, Auckland 1010, New Zealand
| | - Bradley S. Case
- School of Science, Auckland University of Technology, 34 St Paul Street, Auckland 1010, New Zealand
| | - Hannah L. Buckley
- School of Science, Auckland University of Technology, 34 St Paul Street, Auckland 1010, New Zealand
- Corresponding author
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Wang L, Zhao M, Du X, Feng K, Gu S, Zhou Y, Yang X, Zhang Z, Wang Y, Zhang Z, Zhang Q, Xie B, Han G, Deng Y. Fungi and cercozoa regulate methane-associated prokaryotes in wetland methane emissions. Front Microbiol 2023; 13:1076610. [PMID: 36687630 PMCID: PMC9853292 DOI: 10.3389/fmicb.2022.1076610] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2022] [Accepted: 12/05/2022] [Indexed: 01/09/2023] Open
Abstract
Wetlands are natural sources of methane (CH4) emissions, providing the largest contribution to the atmospheric CH4 pool. Changes in the ecohydrological environment of coastal salt marshes, especially the surface inundation level, cause instability in the CH4 emission levels of coastal ecosystems. Although soil methane-associated microorganisms play key roles in both CH4 generation and metabolism, how other microorganisms regulate methane emission and their responses to inundation has not been investigated. Here, we studied the responses of prokaryotic, fungal and cercozoan communities following 5 years of inundation treatments in a wetland experimental site, and molecular ecological networks analysis (MENs) was constructed to characterize the interdomain relationship. The result showed that the degree of inundation significantly altered the CH4 emissions, and the abundance of the pmoA gene for methanotrophs shifted more significantly than the mcrA gene for methanogens, and they both showed significant positive correlations to methane flux. Additionally, we found inundation significantly altered the diversity of the prokaryotic and fungal communities, as well as the composition of key species in interactions within prokaryotic, fungal, and cercozoan communities. Mantel tests indicated that the structure of the three communities showed significant correlations to methane emissions (p < 0.05), suggesting that all three microbial communities directly or indirectly contributed to the methane emissions of this ecosystem. Correspondingly, the interdomain networks among microbial communities revealed that methane-associated prokaryotic and cercozoan OTUs were all keystone taxa. Methane-associated OTUs were more likely to interact in pairs and correlated negatively with the fungal and cercozoan communities. In addition, the modules significantly positively correlated with methane flux were affected by environmental stress (i.e., pH) and soil nutrients (i.e., total nitrogen, total phosphorus and organic matter), suggesting that these factors tend to positively regulate methane flux by regulating microbial relationships under inundation. Our findings demonstrated that the inundation altered microbial communities in coastal wetlands, and the fungal and cercozoan communities played vital roles in regulating methane emission through microbial interactions with the methane-associated community.
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Affiliation(s)
- Linlin Wang
- Institute of Marine Science and Technology, Shandong University, Qingdao, China
| | - Mingliang Zhao
- CAS Key Laboratory of Coastal Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, China
| | - Xiongfeng Du
- CAS Key Laboratory for Environmental Biotechnology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences (CAS), Beijing, China
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing, China
| | - Kai Feng
- CAS Key Laboratory for Environmental Biotechnology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences (CAS), Beijing, China
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing, China
| | - Songsong Gu
- CAS Key Laboratory for Environmental Biotechnology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences (CAS), Beijing, China
| | - Yuqi Zhou
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou, China
| | - Xingsheng Yang
- CAS Key Laboratory for Environmental Biotechnology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences (CAS), Beijing, China
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing, China
| | - Zhaojing Zhang
- Institute of Marine Science and Technology, Shandong University, Qingdao, China
| | - Yingcheng Wang
- Collage of Agriculture and Animal Husbandry, Qinghai University, Xining, China
| | - Zheng Zhang
- Institute of Marine Science and Technology, Shandong University, Qingdao, China
| | - Qi Zhang
- Institute of Marine Science and Technology, Shandong University, Qingdao, China
| | - Baohua Xie
- Yellow River Delta Field Observation and Research Station of Coastal Wetland Ecosystem, Chinese Academy of Sciences, Yantai, China
- Key Laboratory of Coastal Zone Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, China
| | - Guangxuan Han
- Yellow River Delta Field Observation and Research Station of Coastal Wetland Ecosystem, Chinese Academy of Sciences, Yantai, China
- Key Laboratory of Coastal Zone Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, China
| | - Ye Deng
- Institute of Marine Science and Technology, Shandong University, Qingdao, China
- CAS Key Laboratory for Environmental Biotechnology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences (CAS), Beijing, China
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing, China
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van der Putten WH, Bardgett RD, Farfan M, Montanarella L, Six J, Wall DH. Soil biodiversity needs policy without borders. Science 2023; 379:32-34. [PMID: 36603087 DOI: 10.1126/science.abn7248] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Soil health laws should account for global soil connections.
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Affiliation(s)
- Wim H van der Putten
- Netherlands Institute of Ecology, Wageningen, Netherlands.,Department of Nematology, Wageningen University, Wageningen, Netherlands
| | - Richard D Bardgett
- Department of Earth and Environmental Sciences, The University of Manchester, Manchester, UK
| | - Monica Farfan
- School of Global Environmental Sustainability, Colorado State University, Ft. Collins, CO, USA.,Department of Biology, Colorado State University, Ft. Collins, CO, USA
| | | | - Johan Six
- Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland
| | - Diana H Wall
- School of Global Environmental Sustainability, Colorado State University, Ft. Collins, CO, USA.,Department of Biology, Colorado State University, Ft. Collins, CO, USA
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Berlinches de Gea A, Hautier Y, Geisen S. Interactive effects of global change drivers as determinants of the link between soil biodiversity and ecosystem functioning. GLOBAL CHANGE BIOLOGY 2023; 29:296-307. [PMID: 36281756 DOI: 10.1111/gcb.16471] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Revised: 09/20/2022] [Accepted: 09/20/2022] [Indexed: 06/16/2023]
Abstract
Biodiversity, both aboveground and belowground, is negatively affected by global changes such as drought or warming. This loss of biodiversity impacts Earth's ecosystems, as there is a positive relationship between biodiversity and ecosystem functioning (BEF). Even though soils host a large fraction of biodiversity that underlies major ecosystem functions, studies exploring the relationship between soil biodiversity and ecosystem functioning (sBEF) as influenced by global change drivers (GCDs) remain scarce. Here we highlight the need to decipher sBEF relationships under the effect of interactive GCDs that are intimately connected in a changing world. We first state that sBEF relationships depend on the type of function (e.g., C cycling or decomposition) and biodiversity facet (e.g., abundance, species richness, or biomass) considered. Then, we shed light on the impact of single and interactive GCDs on soil biodiversity and sBEF and show that results from scarce studies studying interactive effects range from antagonistic to additive to synergistic when two individual GCDs cooccur. This indicates the need for studies quantitatively accounting for the impacts of interactive GCDs on sBEF relationships. Finally, we provide guidelines for optimized methodological and experimental approaches to study sBEF in a changing world that will provide more valuable information on the real impact of (interactive) GCDs on sBEF. Together, we highlight the need to decipher the sBEF relationship in soils to better understand soil functioning under ongoing global changes, as changes in sBEF are of immediate importance for ecosystem functioning.
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Affiliation(s)
| | - Yann Hautier
- Ecology and Biodiversity Group, Department of Biology, Utrecht University, Utrecht, The Netherlands
| | - Stefan Geisen
- Laboratory of Nematology, Wageningen University & Research, Wageningen, The Netherlands
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Wang Z, Liu X, Zhou W, Sinclair F, Shi L, Xu J, Gui H. Land use intensification in a dry-hot valley reduced the constraints of water content on soil microbial diversity and multifunctionality but increased CO 2 production. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 852:158397. [PMID: 36055510 DOI: 10.1016/j.scitotenv.2022.158397] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Revised: 08/21/2022] [Accepted: 08/25/2022] [Indexed: 06/15/2023]
Abstract
Conversion of abandoned land (mainly savanna) into cropland generally occurs in fragile ecosystems such as dry-hot valleys (DHVs) in southwest China, with the intent of increasing land productivity and conducting ecological restoration. However, the effects of conversion on soil microbial communities and carbon turnover of savanna ecosystems remain unclear, since savannas could be a vital but overlooked carbon sink. To illustrate the ecological consequences of land-use change (LUC) for savanna ecosystems, a 1-year field experiment was conducted in DHVs of southwest China. The soil properties, microbial respiration, and metagenomics from two different land-use types (grassland and mango plantation) were examined to reveal the effects of regional LUC on soil C turnover and microbial traits. Conversion from degraded grassland into cropland increased the contribution of soil microclimate to the microbial community composition, reduced the constraints of soil water content (SWC), and further decreased nutrient availability. LUC reshaped the composition and structure of soil bacterial communities. Specifically, soil dominant microbes that belonged to Actinobacteria and Proteobacteria were significantly enriched by conversion, while rare microbes that belonged to a wider range of phyla were generally depleted, leading to an overall decrease in community diversity. In addition, LUC-induced changes in soil characteristics and microbial communities further decreased soil multifunctionality as well as the carbon use efficiency of microbes. Intensified microbial respiration and a significant increase in the soil CO2 efflux were observed following LUC, which could drive changes in soil microbial community composition and functions (such as growth and regeneration). In summary, through simultaneously reducing constraints on SWC and decreasing nutrient availability, conversion from degraded grassland to cropland in a DHV decreased soil microbial diversity and multifunctionality, and increased microbial respiration and soil CO2 efflux. Our study provides new insights for understanding the role and mechanisms of LUC in soil carbon turnover in ecologically fragile areas such as DHVs.
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Affiliation(s)
- Zhenghong Wang
- Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; Centre for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; Institute of Plant and Food Science, Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiang Liu
- State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology, Lanzhou University, Lanzhou 730000, China
| | - Wenjun Zhou
- University of Chinese Academy of Sciences, Beijing 100049, China; CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan 666303, China
| | - Fergus Sinclair
- World Agroforestry Centre (ICRAF), United Nations Avenue, Gigiri, P.O. Box 30677-00100, Nairobi, Kenya
| | - Lingling Shi
- Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; Centre for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China
| | - Jianchu Xu
- Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; Centre for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Heng Gui
- Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; Centre for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; University of Chinese Academy of Sciences, Beijing 100049, China.
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Wu Y, Wang B, Wu L, Liu S, Yue L, Wu J, Chen D. Fifty-year habitat subdivision enhances soil microbial biomass and diversity across subtropical land-bridge islands. Front Microbiol 2022; 13:1063340. [PMID: 36569066 PMCID: PMC9780280 DOI: 10.3389/fmicb.2022.1063340] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Accepted: 11/18/2022] [Indexed: 12/13/2022] Open
Abstract
Although habitat loss and subdivision are considered main causes of sharp declines in biodiversity, there is still great uncertainty concerning the response of soil microbial biomass, diversity, and assemblage to habitat subdivision at the regional scale. Here, we selected 61 subtropical land-bridge islands (with small, medium, and large land areas) with a 50-year history of habitat subdivision and 9 adjacent mainland sites to investigate how habitat subdivision-induced unequal-sized patches and isolation affects biomass, diversity, and assemblages of soil bacteria and fungi. We found that the soil bacterial and fungal biomass on all unequal-sized islands were higher than that on mainland, while soil bacterial and fungal richness on the medium-sized islands were higher than that on mainland and other-sized islands. The habitat subdivision-induced increases in microbial biomass or richness were mainly associated with the changes in subdivision-specified habitat heterogeneities, especial for soil pH and soil moisture. Habitat subdivision reduced soil bacterial dissimilarity on medium-sized islands but did not affect soil fungal dissimilarity on islands of any size. The habitat fragment-induced changes in soil microbial dissimilarity were mainly associated with microbial richness. In summary, our results based on the responses of soil microbial communities from subtropical land-bridge islands are not consistent with the island biogeographical hypotheses but are to some extent consistent with the tradeoff between competition and dispersal. These findings indicate that the response of soil microbial communities to habitat subdivision differed by degree of subdivision and strongly related to habitat heterogeneity, and the distribution of microbial diversity among islands is also affected by tradeoff between competition and dispersal.
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Affiliation(s)
- Ying Wu
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming, China,Key Laboratory of Soil Ecology and Health in Universities of Yunnan Province, School of Ecology and Environmental Science, Yunnan University, Kunming, China,Engineering Research Center of Eco-Environment in Three Gorges Reservoir Region of Ministry of Education, China Three Gorges University, Yichang, China
| | - Bing Wang
- Engineering Research Center of Eco-Environment in Three Gorges Reservoir Region of Ministry of Education, China Three Gorges University, Yichang, China
| | - Liji Wu
- Engineering Research Center of Eco-Environment in Three Gorges Reservoir Region of Ministry of Education, China Three Gorges University, Yichang, China
| | - Shengen Liu
- Engineering Research Center of Eco-Environment in Three Gorges Reservoir Region of Ministry of Education, China Three Gorges University, Yichang, China
| | - Lingyan Yue
- Engineering Research Center of Eco-Environment in Three Gorges Reservoir Region of Ministry of Education, China Three Gorges University, Yichang, China
| | - Jianping Wu
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming, China,Key Laboratory of Soil Ecology and Health in Universities of Yunnan Province, School of Ecology and Environmental Science, Yunnan University, Kunming, China,Jianping Wu,
| | - Dima Chen
- Engineering Research Center of Eco-Environment in Three Gorges Reservoir Region of Ministry of Education, China Three Gorges University, Yichang, China,*Correspondence: Dima Chen,
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48
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Yang X, Huang X, Cheng J, Cheng Z, Yang Q, Hu L, Xu J, He Y. Diversity-triggered bottom-up trophic interactions impair key soil functions under lindane pollution stress. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 314:120293. [PMID: 36183873 DOI: 10.1016/j.envpol.2022.120293] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2022] [Revised: 08/29/2022] [Accepted: 09/24/2022] [Indexed: 06/16/2023]
Abstract
A growing amount of evidence suggests that microbial diversity loss may have negative effects on soil ecosystem function. However, less attention has been paid to the determinants of the relationship between community diversity and soil functioning under pollution stress. Here we manipulated microbial diversity to observe how biotic and abiotic factors influenced soil multi-functions (e.g. lindane degradation, soil respiration and nutrient cycling). Results showed that protist community was more sensitive to dilution, pollution stress, and sodium acetate addition than bacterial and fungal community. Acetate addition accelerated the lindane removal. Any declines in microbial diversity reduced the specialized soil processes (NO3-N production, and N2O flux), but increased soil respiration rate. Dilution led to a significant increase in consumers-bacterial and fungi-bacterial interaction as evidenced by co-occurrence network, which possibly played roles in maintaining microbiome stability and resilience. Interestingly, pollution stress and resource availability weaken the relationship between microbial diversity and soil functions through the bottom-up trophic interaction and environmental preference of soil microbiome. Overall, this work provides experimental evidence that loss in microbial diversity, accompanied with changes in trophic interactions mediated biotic and abiotic factors, could have important consequences for specialized soil functioning in farmland ecosystems.
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Affiliation(s)
- Xueling Yang
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China; Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Hangzhou, 310058, China
| | - Xiaowei Huang
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China; Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Hangzhou, 310058, China
| | - Jie Cheng
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China; Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Hangzhou, 310058, China
| | - Zhongyi Cheng
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China; Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Hangzhou, 310058, China
| | - Qi Yang
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China; Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Hangzhou, 310058, China
| | - Lingfei Hu
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China; Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Hangzhou, 310058, China.
| | - Jianming Xu
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China; Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Hangzhou, 310058, China
| | - Yan He
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China; Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Hangzhou, 310058, China
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49
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Mo Y, Peng F, Jeppesen E, Gamfeldt L, Xiao P, Al MA, Yang J. Microbial network complexity drives non-linear shift in biodiversity-nutrient cycling in a saline urban reservoir. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 850:158011. [PMID: 35970466 DOI: 10.1016/j.scitotenv.2022.158011] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Revised: 08/09/2022] [Accepted: 08/09/2022] [Indexed: 06/15/2023]
Abstract
Aquatic biodiversity is important in mediating ecosystem functioning, contributing to ecosystem sustainability and human wellbeing. However, how microbial network complexity affects the biodiversity-nutrient cycling relationship in saline freshwater ecosystems remains underexplored. Using high-resolution time-series data, we examined the relationships between microeukaryotic-bacterial community network complexity, biodiversity and multi-nutrient cycling in an urban reservoir undergoing a freshwater salinization-desalinization cycle. We found that low microbial diversity enhanced ecosystem multi-nutrient cycling under high salinity stress. In addition, multi-nutrient cycling declined with increased network complexity. Further, we found a non-linear relationship between salinity-induced shifts in the complexity of the microbial network and biodiversity-nutrient cycling (BNC) relationship of keystone taxa, i.e. the strength of the BNC relationship first became weak and then strong with increased network complexity. Together, these results highlighted the significant insight that there is not always positive relationship between biodiversity/network complexity and multi-nutrient cycling, even between network complexity and BNC relationship in real-world ecosystems, suggesting that preserving microbial association is important in aquatic health managing and evaluating the freshwater salinization problem.
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Affiliation(s)
- Yuanyuan Mo
- Aquatic EcoHealth Group, Fujian Key Laboratory of Watershed Ecology, Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Feng Peng
- Aquatic EcoHealth Group, Fujian Key Laboratory of Watershed Ecology, Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China
| | - Erik Jeppesen
- Department of Ecoscience, Aarhus University, Silkeborg 8600, Denmark; Sino-Danish Centre for Education and Research, Beijing 100049, China; Limnology Laboratory, Department of Biological Sciences and Centre for Ecosystem Research and Implementation, Middle East Technical University, Ankara 06800, Turkey; Institute of Marine Sciences, Middle East Technical University, Erdemli-Mersin 33731, Turkey
| | - Lars Gamfeldt
- Department of Marine Sciences, University of Gothenburg, Göteborg SE-40530, Sweden
| | - Peng Xiao
- Aquatic EcoHealth Group, Fujian Key Laboratory of Watershed Ecology, Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China
| | - Mamun Abdullah Al
- Aquatic EcoHealth Group, Fujian Key Laboratory of Watershed Ecology, Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jun Yang
- Aquatic EcoHealth Group, Fujian Key Laboratory of Watershed Ecology, Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China.
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50
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Guerra CA, Berdugo M, Eldridge DJ, Eisenhauer N, Singh BK, Cui H, Abades S, Alfaro FD, Bamigboye AR, Bastida F, Blanco-Pastor JL, de Los Ríos A, Durán J, Grebenc T, Illán JG, Liu YR, Makhalanyane TP, Mamet S, Molina-Montenegro MA, Moreno JL, Mukherjee A, Nahberger TU, Peñaloza-Bojacá GF, Plaza C, Picó S, Verma JP, Rey A, Rodríguez A, Tedersoo L, Teixido AL, Torres-Díaz C, Trivedi P, Wang J, Wang L, Wang J, Zaady E, Zhou X, Zhou XQ, Delgado-Baquerizo M. Global hotspots for soil nature conservation. Nature 2022; 610:693-698. [PMID: 36224389 DOI: 10.1038/s41586-022-05292-x] [Citation(s) in RCA: 41] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Accepted: 08/30/2022] [Indexed: 11/09/2022]
Abstract
Soils are the foundation of all terrestrial ecosystems1. However, unlike for plants and animals, a global assessment of hotspots for soil nature conservation is still lacking2. This hampers our ability to establish nature conservation priorities for the multiple dimensions that support the soil system: from soil biodiversity to ecosystem services. Here, to identify global hotspots for soil nature conservation, we performed a global field survey that includes observations of biodiversity (archaea, bacteria, fungi, protists and invertebrates) and functions (critical for six ecosystem services) in 615 composite samples of topsoil from a standardized survey in all continents. We found that each of the different ecological dimensions of soils-that is, species richness (alpha diversity, measured as amplicon sequence variants), community dissimilarity and ecosystem services-peaked in contrasting regions of the planet, and were associated with different environmental factors. Temperate ecosystems showed the highest species richness, whereas community dissimilarity peaked in the tropics, and colder high-latitudinal ecosystems were identified as hotspots of ecosystem services. These findings highlight the complexities that are involved in simultaneously protecting multiple ecological dimensions of soil. We further show that most of these hotspots are not adequately covered by protected areas (more than 70%), and are vulnerable in the context of several scenarios of global change. Our global estimation of priorities for soil nature conservation highlights the importance of accounting for the multidimensionality of soil biodiversity and ecosystem services to conserve soils for future generations.
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Affiliation(s)
- Carlos A Guerra
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany. .,Institute of Biology, Martin Luther University Halle Wittenberg, Halle(Saale), Germany. .,Institute of Biology, Leipzig University, Leipzig, Germany.
| | - Miguel Berdugo
- Institute of Integrative Biology, Department of Environment Systems Science, ETH Zürich, Zürich, Switzerland
| | - David J Eldridge
- Centre for Ecosystem Science, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, New South Wales, Australia
| | - Nico Eisenhauer
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Institute of Biology, Leipzig University, Leipzig, Germany
| | - Brajesh K Singh
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia.,Global Centre for Land-Based Innovation, Western Sydney University, Penrith, New South Wales, Australia
| | - Haiying Cui
- Institute of Grassland Science, School of Life Science, Northeast Normal University, Key Laboratory of Vegetation Ecology of the Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Changchun, China.,Departamento de Sistemas Físicos, Químicos y Naturales, Universidad Pablo de Olavide, Seville, Spain
| | - Sebastian Abades
- GEMA Center for Genomics, Ecology and Environment, Faculty of Interdisciplinary Studies, Universidad Mayor, Huechuraba, Chile
| | - Fernando D Alfaro
- GEMA Center for Genomics, Ecology and Environment, Faculty of Interdisciplinary Studies, Universidad Mayor, Huechuraba, Chile.,Instituto de Ecología & Biodiversidad (IEB), Santiago, Chile
| | | | - Felipe Bastida
- CEBAS-CSIC, Campus Universitario de Espinardo, Murcia, Spain
| | | | - Asunción de Los Ríos
- Museo Nacional de Ciencias Naturales, Consejo Superior de Investigaciones Científicas, Madrid, Spain
| | - Jorge Durán
- Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, Coimbra, Portugal.,Misión Biolóxica de Galicia, Consejo Superior de Investigaciones Científicas, Pontevedra, Spain
| | - Tine Grebenc
- Slovenian Forestry Institute, Ljubljana, Slovenia
| | - Javier G Illán
- Department of Entomology, College of Agricultural, Human, and Natural Resource Sciences, Washington State University, Pullman, WA, USA
| | - Yu-Rong Liu
- College of Resources and Environment, Huazhong Agricultural University, Wuhan, China
| | - Thulani P Makhalanyane
- Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa
| | - Steven Mamet
- Department of Soil Science, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Saskatchewan, Canada
| | - Marco A Molina-Montenegro
- Laboratorio de Ecología Integrativa, Instituto de Ciencias Biológicas, Universidad de Talca, Talca, Chile.,CEAZA, Universidad Católica del Norte, Coquimbo, Chile
| | - José L Moreno
- CEBAS-CSIC, Campus Universitario de Espinardo, Murcia, Spain
| | - Arpan Mukherjee
- Institute of Environment and Sustainable Development, Banaras Hindu University, Varanasi, India
| | | | | | - César Plaza
- Instituto de Ciencias Agrarias, Consejo Superior de Investigaciones Científicas, Madrid, Spain
| | - Sergio Picó
- Departamento de Biología, Instituto Universitario de Investigación Marina (INMAR), Universidad de Cádiz, Puerto Real, Spain
| | - Jay Prakash Verma
- Institute of Environment and Sustainable Development, Banaras Hindu University, Varanasi, India
| | - Ana Rey
- Museo Nacional de Ciencias Naturales, Consejo Superior de Investigaciones Científicas, Madrid, Spain
| | - Alexandra Rodríguez
- Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, Coimbra, Portugal
| | - Leho Tedersoo
- Mycology and Microbiology Center, University of Tartu, Tartu, Estonia.,College of Science, King Saud University, Riyadh, Saudi Arabia
| | - Alberto L Teixido
- Departamento de Botânica e Ecologia, Instituto de Biociências, Universidade Federal de Mato Grosso, Cuiabá, Brazil
| | - Cristian Torres-Díaz
- Grupo de Investigación en Biodiversidad y Cambio Global (GI BCG), Departamento de Ciencias Básicas, Universidad del Bío-Bío, Chillán, Chile
| | - Pankaj Trivedi
- Microbiome Network and Department of Agricultural Biology, Colorado State University, Fort Collins, CO, USA
| | - Juntao Wang
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
| | - Ling Wang
- Institute of Grassland Science, School of Life Science, Northeast Normal University, Key Laboratory of Vegetation Ecology of the Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Changchun, China
| | - Jianyong Wang
- Institute of Grassland Science, School of Life Science, Northeast Normal University, Key Laboratory of Vegetation Ecology of the Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Changchun, China
| | - Eli Zaady
- Department of Natural Resources, Agricultural Research Organization, Institute of Plant Sciences, Gilat Research Center, Negev, Israel
| | - Xiaobing Zhou
- State Key Laboratory of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, China
| | - Xin-Quan Zhou
- College of Resources and Environment, Huazhong Agricultural University, Wuhan, China
| | - Manuel Delgado-Baquerizo
- Laboratorio de Biodiversidad y Funcionamiento Ecosistémico, Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS), CSIC, Seville, Spain. .,Unidad Asociada CSIC-UPO (BioFun), Universidad Pablo de Olavide, Seville, Spain.
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