1
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Timalsina B, Lee S, Kaang BK. Advances in the labelling and selective manipulation of synapses. Nat Rev Neurosci 2024; 25:668-687. [PMID: 39174832 DOI: 10.1038/s41583-024-00851-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/23/2024] [Indexed: 08/24/2024]
Abstract
Synapses are highly specialized neuronal structures that are essential for neurotransmission, and they are dynamically regulated throughout the lifetime. Although accumulating evidence indicates that these structures are crucial for information processing and storage in the brain, their precise roles beyond neurotransmission are yet to be fully appreciated. Genetically encoded fluorescent tools have deepened our understanding of synaptic structure and function, but developing an ideal methodology to selectively visualize, label and manipulate synapses remains challenging. Here, we provide an overview of currently available synapse labelling techniques and describe their extension to enable synapse manipulation. We categorize these approaches on the basis of their conceptual bases and target molecules, compare their advantages and limitations and propose potential modifications to improve their effectiveness. These methods have broad utility, particularly for investigating mechanisms of synaptic function and synaptopathy.
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Affiliation(s)
- Binod Timalsina
- Center for Cognition and Sociality, Institute for Basic Science (IBS), Daejeon, South Korea
| | - Sangkyu Lee
- Center for Cognition and Sociality, Institute for Basic Science (IBS), Daejeon, South Korea
| | - Bong-Kiun Kaang
- Center for Cognition and Sociality, Institute for Basic Science (IBS), Daejeon, South Korea.
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2
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Liu W, Stenovec M, Lee W, Montana V, Kreft M, Zorec R, Parpura V. Probing single molecule mechanical interactions of syntaxin 1A with native synaptobrevin 2 residing on a secretory vesicle. Cell Calcium 2022; 104:102570. [PMID: 35314381 PMCID: PMC9119915 DOI: 10.1016/j.ceca.2022.102570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 03/04/2022] [Accepted: 03/09/2022] [Indexed: 11/25/2022]
Abstract
Interactive mechanical forces between pairs of individual SNARE proteins synaptobrevin 2 (Sb2) and syntaxin 1A (Sx1A) may be sufficient to mediate vesicle docking. This notion, based on force spectroscopy single molecule measurements probing recombinant Sx1A an Sb2 in silico, questioned a predominant view of docking via the ternary SNARE complex formation, which includes an assembly of the intermediate cis binary complex between Sx1A and SNAP25 on the plasma membrane to engage Sb2 on the vesicle. However, whether a trans binary Sx1A-Sb2 complex alone could mediate vesicle docking in a cellular environment remains unclear. To address this issue, we used atomic force microscopy (AFM) in the force spectroscopy mode combined with fluorescence imaging. Using AFM tips functionalized with the full Sx1A cytosolic domain, we probed native Sb2 studding the membrane of secretory vesicles docked at the plasma membrane patches, referred to as "inside-out lawns", identified based on fluorescence stains and prepared from primary culture of lactotrophs. We recorded single molecule Sx1A-Sb2 mechanical interactions and obtained measurements of force (∼183 pN) and extension (∼21.6 nm) necessary to take apart Sx1A-Sb2 binding interactions formed at tip-vesicle contact. Measured interactive force between a single pair of Sx1A-Sb2 molecules is sufficient to hold a single secretory vesicle docked at the plasma membrane within distances up to that of the measured extension. This finding further advances a notion that native vesicle docking can be mediated by a single trans binary Sx1A-Sb2 complex in the absence of SNAP25.
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Affiliation(s)
- Wei Liu
- Department of Neurobiology, Atomic Force Microscopy & Nanotechnology Laboratories, The University of Alabama at Birmingham, Birmingham, AL 35294, United States of America
| | - Matjaž Stenovec
- Laboratory of Neuroendocrinology-Molecular Cell Physiology, Institute of Pathophysiology, Faculty of Medicine, University of Ljubljana, Zaloška 4, 1000 Ljubljana, EU, Slovenia
| | - William Lee
- Department of Neurobiology, Atomic Force Microscopy & Nanotechnology Laboratories, The University of Alabama at Birmingham, Birmingham, AL 35294, United States of America
| | - Vedrana Montana
- Department of Neurobiology, Atomic Force Microscopy & Nanotechnology Laboratories, The University of Alabama at Birmingham, Birmingham, AL 35294, United States of America
| | - Marko Kreft
- University of Ljubljana, Biotechnical Faculty, Department of Biology, CPAE, Večna pot 111, 1000 Ljubljana, EU, Slovenia
| | - Robert Zorec
- Laboratory of Neuroendocrinology-Molecular Cell Physiology, Institute of Pathophysiology, Faculty of Medicine, University of Ljubljana, Zaloška 4, 1000 Ljubljana, EU, Slovenia.
| | - Vladimir Parpura
- Department of Neurobiology, Atomic Force Microscopy & Nanotechnology Laboratories, The University of Alabama at Birmingham, Birmingham, AL 35294, United States of America.
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3
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Su Z, Li T, Wu D, Wu Y, Li G. Recent Progress on Single-Molecule Detection Technologies for Food Safety. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2022; 70:458-469. [PMID: 34985271 DOI: 10.1021/acs.jafc.1c06808] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Rapid and sensitive detection technologies for food contaminants play vital roles in food safety. Due to the complexity of the food matrix and the trace amount distribution, traditional methods often suffer from unsatisfying accuracy, sensitivity, or specificity. In past decades, single-molecule detection (SMD) has emerged as a way to realize the rapid and ultrasensitive measurement with low sample consumption, showing a great potential in food contaminants detection. For instance, based on the nanopore technique, simple and effective methods for single-molecule analysis of food contaminants have been developed. To our knowledge, there has been a rare review that focuses on SMD techniques for food safety. The present review attempts to cover some typical SMD methods in food safety, including electrochemistry, optical spectrum, and atom force microscopy. Then, recent applications of these techniques for detecting food contaminants such as biotoxins, pesticides, heavy metals, and illegal additives are reviewed. Finally, existing research challenges and future trends of SMD in food safety are also tentatively proposed.
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Affiliation(s)
- Zhuoqun Su
- School of Food and Biological Engineering, Shaanxi University of Science and Technology, Xi'an 710021, China
| | - Tong Li
- School of Food and Biological Engineering, Shaanxi University of Science and Technology, Xi'an 710021, China
| | - Di Wu
- Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, 19 Chlorine Gardens, Belfast BT9 5DL, United Kingdom
| | - Yongning Wu
- School of Food and Biological Engineering, Shaanxi University of Science and Technology, Xi'an 710021, China
- NHC Key Laboratory of Food Safety Risk Assessment, Food Safety Research Unit (2019RU014) of Chinese Academy of Medical Science, China National Center for Food Safety Risk Assessment, Beijing 100021, China
| | - Guoliang Li
- School of Food and Biological Engineering, Shaanxi University of Science and Technology, Xi'an 710021, China
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4
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Hobbs RJ, Thomas CA, Halliwell J, Gwenin CD. Rapid Detection of Botulinum Neurotoxins-A Review. Toxins (Basel) 2019; 11:E418. [PMID: 31319550 PMCID: PMC6669533 DOI: 10.3390/toxins11070418] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2019] [Revised: 07/15/2019] [Accepted: 07/15/2019] [Indexed: 12/13/2022] Open
Abstract
A toxin is a poisonous substance produced within living cells or organisms. One of the most potent groups of toxins currently known are the Botulinum Neurotoxins (BoNTs). These are so deadly that as little as 62 ng could kill an average human; to put this into context that is approximately 200,000 × less than the weight of a grain of sand. The extreme toxicity of BoNTs leads to the need for methods of determining their concentration at very low levels of sensitivity. Currently the mouse bioassay is the most widely used detection method monitoring the activity of the toxin; however, this assay is not only lengthy, it also has both cost and ethical issues due to the use of live animals. This review focuses on detection methods both existing and emerging that remove the need for the use of animals and will look at three areas; speed of detection, sensitivity of detection and finally cost. The assays will have wide reaching interest, ranging from the pharmaceutical/clinical industry for production quality management or as a point of care sensor in suspected cases of botulism, the food industry as a quality control measure, to the military, detecting BoNT that has been potentially used as a bio warfare agent.
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Affiliation(s)
- Robert J Hobbs
- Applied Research in Chemistry and Health (ARCH) Research Group, School of Natural Sciences, Bangor University, Bangor, Gwynedd, Wales LL57 2UW, UK
| | - Carol A Thomas
- Applied Research in Chemistry and Health (ARCH) Research Group, School of Natural Sciences, Bangor University, Bangor, Gwynedd, Wales LL57 2UW, UK
| | - Jennifer Halliwell
- Applied Research in Chemistry and Health (ARCH) Research Group, School of Natural Sciences, Bangor University, Bangor, Gwynedd, Wales LL57 2UW, UK
| | - Christopher D Gwenin
- Applied Research in Chemistry and Health (ARCH) Research Group, School of Natural Sciences, Bangor University, Bangor, Gwynedd, Wales LL57 2UW, UK.
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5
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Alexander Reese R, Xu B. Single-molecule detection of proteins and toxins in food using atomic force microscopy. Trends Food Sci Technol 2019. [DOI: 10.1016/j.tifs.2019.03.031] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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6
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Single-molecule detection of proteins and toxins in food using atomic force microscopy. Trends Food Sci Technol 2019. [DOI: 10.1016/j.tifs.2018.01.005] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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7
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Wang Y, Montana V, Grubišić V, Stout RF, Parpura V, Gu LQ. Nanopore sensing of botulinum toxin type B by discriminating an enzymatically cleaved Peptide from a synaptic protein synaptobrevin 2 derivative. ACS APPLIED MATERIALS & INTERFACES 2015; 7:184-92. [PMID: 25511125 PMCID: PMC4296922 DOI: 10.1021/am5056596] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Botulinum neurotoxins (BoNTs) are the most lethal toxin known to human. Biodefense requires early and rapid detection of BoNTs. Traditionally, BoNTs can be detected by looking for signs of botulism in mice that receive an injection of human material, serum or stool. While the living animal assay remains the most sensitive approach, it is costly, slow and associated with legal and ethical constrains. Various biochemical, optical and mechanical methods have been developed for BoNTs detection with improved speed, but with lesser sensitivity. Here, we report a novel nanopore-based BoNT type B (BoNT-B) sensor that monitors the toxin's enzymatic activity on its substrate, a recombinant synaptic protein synaptobrevin 2 derivative. By analyzing the modulation of the pore current caused by the specific BoNT-B-digested peptide as a marker, the presence of BoNT-B at a subnanomolar concentration was identified within minutes. The nanopore detector would fill the niche for a much needed rapid and highly sensitive detection of neurotoxins, and provide an excellent system to explore biophysical mechanisms for biopolymer transportation.
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Affiliation(s)
- Yong Wang
- Department
of Bioengineering and Dalton Cardiovascular Research
Center, University of Missouri, Columbia, Missouri 65211, United States
- Dr. Yong Wang. E-mail:
| | - Vedrana Montana
- Department
of Neurobiology, Center for Glial Biology in Medicine,
Atomic Force Microscopy & Nanotechnology Laboratories, Civitan
International Research Center, Evelyn F. McKnight Brain Institute, University of Alabama at Birmingham, Birmingham, Alabama 35294, United States
- Department of Biotechnology, University of Rijeka, 51000 Rijeka, Croatia
| | - Vladimir Grubišić
- Department
of Neurobiology, Center for Glial Biology in Medicine,
Atomic Force Microscopy & Nanotechnology Laboratories, Civitan
International Research Center, Evelyn F. McKnight Brain Institute, University of Alabama at Birmingham, Birmingham, Alabama 35294, United States
| | - Randy F. Stout
- Department
of Neurobiology, Center for Glial Biology in Medicine,
Atomic Force Microscopy & Nanotechnology Laboratories, Civitan
International Research Center, Evelyn F. McKnight Brain Institute, University of Alabama at Birmingham, Birmingham, Alabama 35294, United States
- Department of Neuroscience, Albert Einstein
College of Medicine, Bronx, New
York, New York 10461, United States
| | - Vladimir Parpura
- Department
of Neurobiology, Center for Glial Biology in Medicine,
Atomic Force Microscopy & Nanotechnology Laboratories, Civitan
International Research Center, Evelyn F. McKnight Brain Institute, University of Alabama at Birmingham, Birmingham, Alabama 35294, United States
- Department of Biotechnology, University of Rijeka, 51000 Rijeka, Croatia
- Dr. Vladimir Parpura.
E-mail:
| | - Li-Qun Gu
- Department
of Bioengineering and Dalton Cardiovascular Research
Center, University of Missouri, Columbia, Missouri 65211, United States
- Dr. Li-Qun Gu. E-mail:
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8
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Guo J, Xu C, Li X, Chen S. A simple, rapid and sensitive FRET assay for botulinum neurotoxin serotype B detection. PLoS One 2014; 9:e114124. [PMID: 25437190 PMCID: PMC4250190 DOI: 10.1371/journal.pone.0114124] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2014] [Accepted: 11/04/2014] [Indexed: 12/20/2022] Open
Abstract
Botulinum neurotoxins (BoNTs), the most potent naturally-occurring neurotoxins known to humans, comprise seven distinct serotypes (BoNT/A-G), each of which exhibits unique substrate specificity. Many methods have been developed for BoNT detection, in particular for BoNT/A, with various complexity and sensitivity, while substrate based FRET assay is considered as the most widely used approach due to its simplicity and sensitivity. In this study, we designed a vesicle-associated membrane protein 2 (VAMP2) based FRET assay based on the understanding of the VAMP2 and light chain/B (LC/B) interactions in our previous studies. The current design constituted the shortest peptide, VAMP2 (63–85), with FRET dyes (EDAN and Dabcyl) labelled at position 76 and 85, respectively, which showed minimal effect on VAMP2 substrate catalysis by LC/B and therefore enhanced the sensitivity of the assay. The FRET peptide, designated as FVP-B, was specific to LC/B, with a detection sensitivity as low as ∼20 pM in 2 h. Importantly, FVP-B showed the potential to be scaled up and used in high throughput screening of LC/B inhibitor. The currently developed FRET assay is one of the most economic and rapid FRET assays for LC/B detection.
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Affiliation(s)
- Jiubiao Guo
- Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong SAR
| | - Ci Xu
- Department of Chemistry, University of Hong Kong, Pokfulam, Hong Kong
| | - Xuechen Li
- Department of Chemistry, University of Hong Kong, Pokfulam, Hong Kong
- * E-mail: (XL); (SC)
| | - Sheng Chen
- Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong SAR
- * E-mail: (XL); (SC)
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9
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Kumar H, Rani R. Development of biosensors for the detection of biological warfare agents: its issues and challenges. Sci Prog 2013; 96:294-308. [PMID: 24244972 PMCID: PMC10365506 DOI: 10.3184/003685013x13777066241280] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
This review discusses current development in biosensors for the detection of biological warfare agents (BWAs). BWAs include bacteria, virus and toxins that are added deliberately into air water and food to spread terrorism and cause disease or death. The rapid and unambiguous detection and identification of BWAs with early warning signals for detecting possible biological attack is a major challenge for government agencies particularly military and health. The detection devices--biosensors--can be classified (according to their physicochemical transducers) into four types: electrochemical, nucleic acid, optical and piezoelectric. Advantages and limitations of biosensors are discussed in this review followed by an assessment of the current state of development of different types of biosensors. The research and development in biosensors for biological warfare agent detection is of great interest for the public as well as for governments.
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Affiliation(s)
- Harish Kumar
- Department of Chemistry, Ch. Devi Lal University, Sirsa, Haryana 125 055, India.
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10
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Abbasova SG, Rudenko NV, Gorokhovatskii AY, Kapralova MV, Vinogradova ID, Vertiev YV, Nesmeyanov VA, Grishin EV. Monoclonal antibodies to botulinum neurotoxins of types A, B, E, and F. RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY 2011; 37:344-53. [DOI: 10.1134/s1068162011030022] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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11
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Dhaked RK, Singh MK, Singh P, Gupta P. Botulinum toxin: bioweapon & magic drug. Indian J Med Res 2010; 132:489-503. [PMID: 21149997 PMCID: PMC3028942] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2009] [Indexed: 11/22/2022] Open
Abstract
Botulinum neurotoxins, causative agents of botulism in humans, are produced by Clostridium botulinum, an anaerobic spore-former Gram positive bacillus. Botulinum neurotoxin poses a major bioweapon threat because of its extreme potency and lethality; its ease of production, transport, and misuse; and the need for prolonged intensive care among affected persons. A single gram of crystalline toxin, evenly dispersed and inhaled, can kill more than one million people. The basis of the phenomenal potency of botulinum toxin is enzymatic; the toxin is a zinc proteinase that cleaves neuronal vesicle associated proteins responsible for acetylcholine release into the neuromuscular junction. As a military or terrorist weapon, botulinum toxin could be disseminated via aerosol or by contamination of water or food supplies, causing widespread casualties. A fascinating aspect of botulinum toxin research in recent years has been development of the most potent toxin into a molecule of significant therapeutic utility . It is the first biological toxin which is licensed for treatment of human diseases. In the late 1980s, Canada approved use of the toxin to treat strabismus, in 2001 in the removal of facial wrinkles and in 2002, the FDA in the United States followed suit. The present review focuses on both warfare potential and medical uses of botulinum neurotoxin.
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Affiliation(s)
- Ram Kumar Dhaked
- Biotechnology Division, Defence Research & Development Establishment, Gwalior, India.
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12
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Characterization of botulinum neurotoxin type A neutralizing monoclonal antibodies and influence of their half-lives on therapeutic activity. PLoS One 2010; 5:e12416. [PMID: 20865035 PMCID: PMC2928723 DOI: 10.1371/journal.pone.0012416] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2010] [Accepted: 08/02/2010] [Indexed: 11/29/2022] Open
Abstract
Botulinum toxins, i.e. BoNT/A to/G, include the most toxic substances known. Since botulism is a potentially fatal neuroparalytic disease with possible use as a biowarfare weapon (Centers for Disease Control and Prevention category A bioterrorism agent), intensive efforts are being made to develop vaccines or neutralizing antibodies. The use of active fragments from non-human immunoglobulins (F(ab')2, Fab', scFv), chemically modified or not, may avoid side effects, but also largely modify the in vivo half-life and effectiveness of these reagents. We evaluated the neutralizing activity of several monoclonal anti-BoNT/A antibodies (mAbs). F(ab')2 fragments, native or treated with polyethyleneglycol (PEG), were prepared from selected mAbs to determine their half-life and neutralizing activity as compared with the initial mAbs. We compared the protective efficiency of the different biochemical forms of anti-toxin mAbs providing the same neutralizing activity. Among fourteen tested mAbs, twelve exhibited neutralizing activity. Fragments from two of the best mAbs (TA12 and TA17), recognizing different epitopes, were produced. These two mAbs neutralized the A1 subtype of the toxin more efficiently than the A2 or A3 subtypes. Since mAb TA12 and its fragments both exhibited the greatest neutralizing activity, they were further evaluated in the therapeutic experiments. These showed that, in a mouse model, a 2- to 4-h interval between toxin and antitoxin injection allows the treatment to remain effective, but also suggested an absence of correlation between the half-life of the antitoxins and the length of time before treatment after botulinum toxin A contamination. These experiments demonstrate that PEG treatment has a strong impact on the half-life of the fragments, without affecting the effectiveness of neutralization, which was maintained after preparation of the fragments. These reagents may be useful for rapid treatment after botulinum toxin A contamination.
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Abstract
Sensitive and rapid detection of botulinum neurotoxins (BoNTs), the most poisonous substances known to date, is essential for studies of medical applications of BoNTs and detection of poisoned food, as well as for response to potential bioterrorist threats. Currently, the most common method of BoNT detection is the mouse bioassay. While this assay is sensitive, it is slow, quite expensive, has limited throughput and requires sacrificing animals. Herein, we discuss and compare recently developed alternative in vitro detection methods and assess their ability to supplement or replace the mouse bioassay in the analysis of complex matrix samples.
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Affiliation(s)
- Petr Čapek
- Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA;
| | - Tobin J. Dickerson
- Department of Chemistry and Worm Institute for Research and Medicine, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA
- Author to whom correspondence should be addressed; ; Tel.: +1-858-784-2522; Fax: +1-858-784-2590
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14
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Čapek P, Dickerson TJ. Sensing the deadliest toxin: technologies for botulinum neurotoxin detection. Toxins (Basel) 2010; 2:24-53. [PMID: 22069545 PMCID: PMC3206617 DOI: 10.3390/toxins2020024] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2009] [Revised: 12/17/2009] [Accepted: 12/22/2009] [Indexed: 11/16/2022] Open
Abstract
Sensitive and rapid detection of botulinum neurotoxins (BoNTs), the most poisonous substances known to date, is essential for studies of medical applications of BoNTs and detection of poisoned food, as well as for response to potential bioterrorist threats. Currently, the most common method of BoNT detection is the mouse bioassay. While this assay is sensitive, it is slow, quite expensive, has limited throughput and requires sacrificing animals. Herein, we discuss and compare recently developed alternative in vitro detection methods and assess their ability to supplement or replace the mouse bioassay in the analysis of complex matrix samples.
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Affiliation(s)
- Petr Čapek
- Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA;
| | - Tobin J. Dickerson
- Department of Chemistry and Worm Institute for Research and Medicine, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA
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15
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Sun S, Ossandon M, Kostov Y, Rasooly A. Lab-on-a-chip for botulinum neurotoxin a (BoNT-A) activity analysis. LAB ON A CHIP 2009; 9:3275-81. [PMID: 19865736 PMCID: PMC2849933 DOI: 10.1039/b912097a] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
A Lab-on-a-chip (LOC) was designed, fabricated and tested for the in vitro detection of botulinum neurotoxin serotype A (BoNT-A) activity using an assay that measures cleavage of a fluorophore-tagged peptide substrate specific for BoNT-A (SNAP-25) by the toxin light chain (LcA). LcA cleavage was detected by Förster Resonance Energy Transfer (FRET) fluorescence. FRET fluorescence was measured by a newly developed portable charge-coupled device (CCD) fluorescent detector equipped with multi-wavelength light-emitting diodes (LED) illumination. An eight V-junction microchannel device for BoNTs activity assays was constructed using Laminated Object Manufacturing (LOM) technology. The six-layer device was fabricated with a Poly(methyl methacrylate (PMMA) core and five polycarbonate (PC) layers micromachined by CO2 laser. The LOC is operated by syringe and is equipped with reagents, sample wells, reaction wells, diffusion traps (to avoid cross contamination among channels) and waste reservoirs. The system was detected LcA at concentrations as low as 0.5 nM, which is the reported sensitivity of the SNAP-25 in vitro cleavage assay. Combined with our CCD detector, the simple point of care system enables the detection of BoNTs activity and may be useful for the performance of other complex medical assays without a laboratory. This approach may realize the potential to enhance the quality of health care delivery for underserved populations.
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Affiliation(s)
- Steven Sun
- Division of Biology, Office of Science and Engineering Laboratories, FDA, NIH/NCI, Silver Spring, MD, 20993, USA6130 Executive Blvd. EPN, Room 6035A Rockville, 20852; Fax: (+301) 402-7819; Tel: (+301) 402-4185
- Center for Advanced Sensor Technology, University of Maryland Baltimore County, MD, 21250
| | - Miguel Ossandon
- Cancer Diagnosis Program, National Cancer Institute, Rockville, MD, 20892
| | - Yordan Kostov
- Center for Advanced Sensor Technology, University of Maryland Baltimore County, MD, 21250
| | - Avraham Rasooly
- Division of Biology, Office of Science and Engineering Laboratories, FDA, NIH/NCI, Silver Spring, MD, 20993, USA6130 Executive Blvd. EPN, Room 6035A Rockville, 20852; Fax: (+301) 402-7819; Tel: (+301) 402-4185
- Cancer Diagnosis Program, National Cancer Institute, Rockville, MD, 20892
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16
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Lo CW, Jiang H. Photopatterning and degradation study of dextran-glycidyl methacrylate hydrogels. POLYM ENG SCI 2009. [DOI: 10.1002/pen.21531] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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17
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Singh A, Glass N, Tolba M, Brovko L, Griffiths M, Evoy S. Immobilization of bacteriophages on gold surfaces for the specific capture of pathogens. Biosens Bioelectron 2009; 24:3645-51. [DOI: 10.1016/j.bios.2009.05.028] [Citation(s) in RCA: 77] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2009] [Revised: 05/03/2009] [Accepted: 05/19/2009] [Indexed: 10/20/2022]
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18
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Frisk ML, Tepp WH, Johnson EA, Beebe DJ. Self-assembled peptide monolayers as a toxin sensing mechanism within arrayed microchannels. Anal Chem 2009; 81:2760-7. [PMID: 19253949 PMCID: PMC2760437 DOI: 10.1021/ac802707u] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A sensor for the lethal bacterial enzyme, botulinum neurotoxin type A (BoNT/A), was developed using self-assembled monolayers (SAMs). SAMs consisting of an immobilized synthetic peptide that mimicked the toxin's in vivo SNAP-25 protein substrate were formed on Au and interfaced with arrayed microfluidic channels. Efforts to optimize SAM composition and assay conditions for greatest reaction efficiency and sensitivity are described in detail. Channel design provided facile fluid manipulation, sample incubation, analyte concentration, and fluorescence detection all within a single microfluidic channel, thus avoiding sample transfer and loss. Peptide SAMs were exposed to varying concentrations of BoNT/A or its catalytic light chain (ALC), resulting in enzymatic cleavage of the peptide substrate from the surface. Fluorescence detection was achieved down to 20 pg/mL ALC and 3 pg/mL BoNT/A in 3 h. Toxin sensing was also accomplished in vegetable soup, demonstrating practicality of the method. The modular design of this microfluidic SAM platform allows for extension to sensing other toxins that operate via enzymatic cleavage, such as the remaining BoNT serotypes B-G, anthrax, and tetanus toxin.
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Affiliation(s)
- Megan L. Frisk
- Department of Chemistry, University of Wisconsin, Madison, Wisconsin 53706
| | - William H. Tepp
- Department of Food Microbiology and Toxicology, Department of Bacteriology, University of Wisconsin, Madison, Wisconsin 53706
| | - Eric A. Johnson
- Department of Food Microbiology and Toxicology, Department of Bacteriology, University of Wisconsin, Madison, Wisconsin 53706
| | - David J. Beebe
- Department of Biomedical Engineering, University of Wisconsin, Madison, Wisconsin 53706
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19
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Montana V, Liu W, Mohideen U, Parpura V. Single molecule measurements of mechanical interactions within ternary SNARE complexes and dynamics of their disassembly: SNAP25 vs. SNAP23. J Physiol 2009; 587:1943-60. [PMID: 19273577 DOI: 10.1113/jphysiol.2009.168575] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
Regulated exocytosis is a crucial event for intercellular communication between neurons and astrocytes within the CNS. The soluble N-ethylmaleimide-sensitive fusion protein attachment protein receptor (SNARE) complex, composed of synaptobrevin 2, syntaxin and synaptosome-associated protein of 25 kDa or 23 kDa (SNAP25 or SNAP23), is essential in this process. It was reported that SNAP25 and SNAP23 have distinct roles in exocytotic release, where SNAP25, but not SNAP23, supports an exocytotic burst. It is not clear, however, whether this is due to the intrinsic properties of the ternary SNARE complex, containing either SNAP25 or SNAP23, or perhaps due to the differential association of these proteins with ancillary proteins to the complex. Here, using force spectroscopy, we show from single molecule investigations of the SNARE complex, that SNAP23A created a local interaction at the ionic layer by cuffing syntaxin 1A and synaptobrevin 2, similar to the action of SNAP25B; thus either of the ternary complexes would allow positioning of vesicles at a maximal distance of approximately 13 nm from the plasma membrane. However, the stability of the ternary SNARE complex containing SNAP23A is less than half of that for the complex containing SNAP25B. Thus, differences in the stability of the two different ternary complexes could underlie some of the SNAP25/23 differential ability to control the exocytotic burst.
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Affiliation(s)
- Vedrana Montana
- Department of Neurobiology, University of Alabama, Birmingham, AL 35294, USA
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20
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Lutwick SM, Lutwick LI. Rapid Detection of Bioterrorism Pathogens. BEYOND ANTHRAX 2009. [PMCID: PMC7176176 DOI: 10.1007/978-1-59745-326-4_16] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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21
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Abstract
Atomic force microscopy (AFM) in force spectroscopy mode has recently emerged as a technique of choice for studying mechanical interactions between the proteins of the core soluble N-ethylmaleimide-sensitive fusion protein attachment protein attachment protein receptor (SNARE) complex. In these experiments, the rupture force, extension, spontaneous dissociation time, and interaction energy for SNARE protein-protein interactions can be obtained at the single molecule level. These measurements, which are complementary to results and conclusions drawn from other techniques, improve our understanding of the role of the SNARE complex in exocytosis.
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Affiliation(s)
- Wei Liu
- Department of Neurobiology, Center for Glial Biology in Medicine, Atomic Force Microscopy and Nanotechnology Laboratories, Civitan International Research Center, Evelyn F. McKnight Brain Institute, University of Alabama, Birmingham, Alabama 35294, USA
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22
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Sapsford KE, Sun S, Francis J, Sharma S, Kostov Y, Rasooly A. A fluorescence detection platform using spatial electroluminescent excitation for measuring botulinum neurotoxin A activity. Biosens Bioelectron 2008; 24:618-25. [PMID: 18644709 PMCID: PMC2844722 DOI: 10.1016/j.bios.2008.06.018] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2008] [Revised: 04/23/2008] [Accepted: 06/04/2008] [Indexed: 11/22/2022]
Abstract
Current biodetection illumination technologies (laser, LED, tungsten lamp, etc.) are based on spot illumination with additional optics required when spatial excitation is required. Herein we describe a new approach of spatial illumination based on electroluminescence (EL) semiconductor strips available in several wavelengths, greatly simplifying the biosensor design by eliminating the need for additional optics. This work combines EL excitation with charge-coupled device (CCD) based detection (EL-CCD detector) of fluorescence for developing a simple portable detector for botulinum neurotoxin A (BoTN-A) activity analysis. A Förster Resonance Energy Transfer (FRET) activity assay for BoTN-A was used to both characterize and optimize the EL-CCD detector. The system consists of two modules: (1) the detection module which houses the CCD camera and emission filters, and (2) the excitation and sample module, containing the EL strip, the excitation filter and the 9-well sample chip. The FRET activity assay used in this study utilized a FITC/DABCYL-SNAP-25 peptide substrate in which cleavage of the substrate by BoTN-A, or its light chain derivative (LcA), produced an increase in fluorescence emission. EL-CCD detector measured limits of detection (LODs) were similar to those measured using a standard fluorescent plate reader with valves between 0.625 and 1.25 nM (31-62 ng/ml) for LcA and 0.313 nM (45 ng/ml) for the full toxin, BoTN-A. As far as the authors are aware this is the first demonstration of phosphor-based EL strips being used for the spatial illumination/excitation of a surface, coupled with CCD for point of care detection.
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Affiliation(s)
- Kim E. Sapsford
- Division of Biology, Office of Science and Engineering Laboratories, FDA, Silver Spring, MD 20993, USA
| | - Steven Sun
- Division of Biology, Office of Science and Engineering Laboratories, FDA, Silver Spring, MD 20993, USA
- Center for Advanced Sensor Technology, University of Maryland Baltimore County, Baltimore MD, 21250, USA
| | - Jesse Francis
- Division of Biology, Office of Science and Engineering Laboratories, FDA, Silver Spring, MD 20993, USA
- Center for Advanced Sensor Technology, University of Maryland Baltimore County, Baltimore MD, 21250, USA
| | - Shashi Sharma
- Division of Microbiology, Office of Regulatory Science, Food and Drug Administration, Center for Food Safety and Applied Nutrition (CFSAN), College Park, MD 20740, USA
| | - Yordan Kostov
- Center for Advanced Sensor Technology, University of Maryland Baltimore County, Baltimore MD, 21250, USA
| | - Avraham Rasooly
- Division of Biology, Office of Science and Engineering Laboratories, FDA, Silver Spring, MD 20993, USA
- National Cancer Institute, Rockville, MD 20892, USA
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23
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Frisk ML, Berthier E, Tepp WH, Johnson EA, Beebe DJ. Bead-based microfluidic toxin sensor integrating evaporative signal amplification. LAB ON A CHIP 2008; 8:1793-800. [PMID: 18941677 DOI: 10.1039/b811075a] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
We have devised a microfluidic platform that incorporates substrate-laden silica beads for sensing the proteolytic activity of botulinum neurotoxin type A (BoNT/A)-one of the most poisonous substances known and a significant biological threat. The sensor relies on toxin-mediated cleavage of a fluorophore-tagged peptide substrate specific for only BoNT/A. Peptide immobilized on beads is recognized and cleaved by the toxin, releasing fluorescent fragments into solution that can be concentrated at an isolated port via evaporation and detected using microscopy. Evaporative concentration in combination with a specific channel geometry provides up to a 3-fold signal amplification in 35 min, allowing for detection of low levels of fluorophore-labeled peptide-a task not easily accomplished using traditional channel designs. Our bead-based microfluidic platform can sense BoNT/A down to 10 pg of toxin per mL buffer solution in 3.5 h and can be adapted to sensing other toxins that operate via enzymatic cleavage of a known substrate.
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Affiliation(s)
- Megan L Frisk
- Department of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, USA
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24
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Parpura V, Mohideen U. Molecular form follows function: (un)snaring the SNAREs. Trends Neurosci 2008; 31:435-43. [PMID: 18675467 DOI: 10.1016/j.tins.2008.06.003] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2008] [Revised: 06/09/2008] [Accepted: 06/09/2008] [Indexed: 11/15/2022]
Abstract
Exocytotic release of transmitters is mediated by the ternary SNARE complex. The form of this complex is consistent with its function in the positioning of vesicles to the plasma membrane and their fusion to it. Recent advances in single-molecule techniques, however, bring an additional layer of complexity to this process, implicating that there might be various modes of operation. For example, the binary syntaxin-synaptobrevin 2 complex, in addition to the ternary complex containing SNAP25, might enable vesicular docking. Single-molecule techniques allow direct measurements of the distance/extension, rupture force, spontaneous dissociation times and interaction energy for SNARE protein-protein interactions. These measurements are complementary to results and conclusions drawn from other techniques. Consequently, single-molecule techniques promise tremendous opportunities for in vitro investigations of SNARE proteins to improve our understanding of their role in exocytosis.
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Affiliation(s)
- Vladimir Parpura
- Department of Neurobiology, Civitan International Research Center, Evelyn F. McKnight Brain Institute, Atomic Force Microscopy and Nanotechnology Laboratories, University of Alabama, Birmingham, AL 35294, USA.
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25
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Bagramyan K, Barash JR, Arnon SS, Kalkum M. Attomolar detection of botulinum toxin type A in complex biological matrices. PLoS One 2008; 3:e2041. [PMID: 18446228 PMCID: PMC2323579 DOI: 10.1371/journal.pone.0002041] [Citation(s) in RCA: 80] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2008] [Accepted: 03/15/2008] [Indexed: 11/19/2022] Open
Abstract
BACKGROUND A highly sensitive, rapid and cost efficient method that can detect active botulinum neurotoxin (BoNT) in complex biological samples such as foods or serum is desired in order to 1) counter the potential bioterrorist threat 2) enhance food safety 3) enable future pharmacokinetic studies in medical applications that utilize BoNTs. METHODOLOGY/PRINCIPAL FINDINGS Here we describe a botulinum neurotoxin serotype A assay with a large immuno-sorbent surface area (BoNT/A ALISSA) that captures a low number of toxin molecules and measures their intrinsic metalloprotease activity with a fluorogenic substrate. In direct comparison with the "gold standard" mouse bioassay, the ALISSA is four to five orders of magnitudes more sensitive and considerably faster. Our method reaches attomolar sensitivities in serum, milk, carrot juice, and in the diluent fluid used in the mouse assay. ALISSA has high specificity for the targeted type A toxin when tested against alternative proteases including other BoNT serotypes and trypsin, and it detects the holotoxin as well as the multi-protein complex form of BoNT/A. The assay was optimized for temperature, substrate concentration, size and volume proportions of the immuno-sorbent matrix, enrichment and reaction times. Finally, a kinetic model is presented that is consistent with the observed improvement in sensitivity. CONCLUSIONS/SIGNIFICANCE The sensitivity, specificity, speed and simplicity of the BoNT ALISSA should make this method attractive for diagnostic, biodefense and pharmacological applications.
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Affiliation(s)
- Karine Bagramyan
- Immunology Division, Beckman Research Institute of the City of Hope, Duarte, California, United States of America
| | - Jason R. Barash
- Infant Botulism Treatment and Prevention Program, California Department of Public Health, Richmond, California, United States of America
| | - Stephen S. Arnon
- Infant Botulism Treatment and Prevention Program, California Department of Public Health, Richmond, California, United States of America
| | - Markus Kalkum
- Immunology Division, Beckman Research Institute of the City of Hope, Duarte, California, United States of America
- * E-mail:
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26
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Montana V, Liu W, Mohideen U, Parpura V. Single Molecule Probing of Exocytotic Protein Interactions Using Force Spectroscopy. CROAT CHEM ACTA 2008; 81:31. [PMID: 20151046 PMCID: PMC2819743] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/28/2023] Open
Abstract
Relatively recently, the Atomic Force Microscope (AFM) emerged as a powerful tool for single molecule nanomechanical investigations. Parameters that can be measured by force spectroscopy using AFM, such as the force and total mechanical extension required to break bonds between various proteins can yield valuable insights into the nature of the bond (zippering vs. highly localized binding site), the sequence of its interactions and the energy landscape along the length of the interaction. In this review we discuss the use of AFM in force spectroscopy mode to study intermolecular interactions between the exocytotic proteins of the core SNARE complex. Information gathered by force spectroscopy of protein-protein interactions of this complex supplement previous results acquired with other techniques, and allows a deeper understanding of SNARE protein interactions and their role in exocytosis.
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Affiliation(s)
- Vedrana Montana
- Department of Neurobiology, Center for Glial Biology in Medicine, Atomic Force Microscopy & Nanotechnology Laboratories, Civitan International Research Center, Evelyn F. McKnight Brain Institute, University of Alabama, Birmingham, AL 35294, USA
| | - Wei Liu
- Department of Neurobiology, Center for Glial Biology in Medicine, Atomic Force Microscopy & Nanotechnology Laboratories, Civitan International Research Center, Evelyn F. McKnight Brain Institute, University of Alabama, Birmingham, AL 35294, USA
| | - Umar Mohideen
- Department of Physics & Astronomy, Center for Nanoscale Science & Engineering, University of California, Riverside, CA 92521, USA
| | - Vladimir Parpura
- Department of Neurobiology, Center for Glial Biology in Medicine, Atomic Force Microscopy & Nanotechnology Laboratories, Civitan International Research Center, Evelyn F. McKnight Brain Institute, University of Alabama, Birmingham, AL 35294, USA
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27
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Goeders KM, Colton JS, Bottomley LA. Microcantilevers: Sensing Chemical Interactions via Mechanical Motion. Chem Rev 2008; 108:522-42. [DOI: 10.1021/cr0681041] [Citation(s) in RCA: 269] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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28
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Volland H, Lamourette P, Nevers MC, Mazuet C, Ezan E, Neuburger LM, Popoff M, Créminon C. A sensitive sandwich enzyme immunoassay for free or complexed Clostridium botulinum neurotoxin type A. J Immunol Methods 2008; 330:120-9. [DOI: 10.1016/j.jim.2007.11.006] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2007] [Revised: 10/17/2007] [Accepted: 11/14/2007] [Indexed: 10/22/2022]
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29
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Functionalization of Probe Tips and Supports for Single-Molecule Recognition Force Microscopy. Top Curr Chem (Cham) 2008; 285:29-76. [DOI: 10.1007/128_2007_24] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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30
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Antimicrobial Peptides: New Recognition Molecules for Detecting Botulinum Toxins. SENSORS 2007; 7:2808-2824. [PMID: 28903262 PMCID: PMC3965214 DOI: 10.3390/s7112808] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/24/2007] [Accepted: 11/14/2007] [Indexed: 11/20/2022]
Abstract
Many organisms secrete antimicrobial peptides (AMPs) for protection against harmful microbes. The present study describes detection of botulinum neurotoxoids A, B and E using AMPs as recognition elements in an array biosensor. While AMP affinities were similar to those for anti-botulinum antibodies, differences in binding patterns were observed and can potentially be used for identification of toxoid serotype. Furthermore, some AMPs also demonstrated superior detection sensitivity compared to antibodies: toxoid A could be detected at 3.5 LD50 of the active toxin in a 75-min assay, whereas toxoids B and E were detected at 14 and 80 LD50 for their respective toxins.
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31
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Detection of Clostridium botulinum neurotoxin coding genes: analysis of PCR products by real time versus capillary gel electrophoresis methods. Eur Food Res Technol 2007. [DOI: 10.1007/s00217-007-0746-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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32
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Nugaeva N, Gfeller KY, Backmann N, Düggelin M, Lang HP, Güntherodt HJ, Hegner M. An antibody-sensitized microfabricated cantilever for the growth detection of Aspergillus niger spores. MICROSCOPY AND MICROANALYSIS : THE OFFICIAL JOURNAL OF MICROSCOPY SOCIETY OF AMERICA, MICROBEAM ANALYSIS SOCIETY, MICROSCOPICAL SOCIETY OF CANADA 2007; 13:13-7. [PMID: 17234032 DOI: 10.1017/s1431927607070067] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2006] [Accepted: 09/18/2006] [Indexed: 05/13/2023]
Abstract
We demonstrate a new sensitive biosensor for detection of vital fungal spores of Aspergillus niger. The biosensor is based on silicon microfabricated cantilever arrays operated in dynamic mode. The change in resonance frequency of the sensor is a function of mass binding to the cantilever surface. For specific A. niger spore immobilization on the cantilever, each cantilever was individually coated with anti-Aspergillus niger polyclonal antibodies. We demonstrate the detection of single A. niger spores and their subsequent growth on the functionalized cantilever surface by online measurements of resonance frequency shifts. The new biosensor operating in humid air allows quantitative and qualitative detection of A. niger spores as well as detection of vital, functional spores in situ within approximately 4 h. The detection limit of the sensor is 103 CFU mL-1. Mass sensitivity of the cantilever sensor is approximately 53 pg Hz-1.
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Affiliation(s)
- Natalia Nugaeva
- Institute of Physics, University of Basel, Klingelbergstrasse 82, CH-4056 Basel, Switzerland.
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33
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Abstract
The term toxin refers in a specific way to a toxic substance of biologic origin; that is, a true toxin is a poison produced by a living organism. The purpose of this article is to review some of the most potentially dangerous toxins of concern today. Mechanisms of action, routes of exposure, diagnostic tools, and treatment recommendations are addressed. In addition, current therapeutic uses for certain toxins are discussed.
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Affiliation(s)
- Matthew Salzman
- Department of Emergency Medicine, Drexel University College of Medicine, 2900 W. Queen Lane, Philadelphia, PA 19129, USA
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34
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Liu W, Montana V, Bai J, Chapman ER, Mohideen U, Parpura V. Single molecule mechanical probing of the SNARE protein interactions. Biophys J 2006; 91:744-58. [PMID: 16648158 PMCID: PMC1483094 DOI: 10.1529/biophysj.105.073312] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Exocytotic release of neurotransmitters is mediated by the ternary soluble N-ethyl maleimide-sensitive fusion protein attachment protein receptors (SNAREs) complex, comprised of syntaxin (Sx), synaptosome-associated protein of 25 kDa (SNAP25), and synaptobrevin 2 (Sb2). Since exocytosis involves the nonequilibrium process of association and dissociation of bonds between molecules of the SNARE complex, dynamic measurements at the single molecule level are necessary for a detailed understanding of these interactions. To address this issue, we used the atomic force microscope in force spectroscopy mode to show from single molecule investigations of the SNARE complex, that Sx1A and Sb2 are zippered throughout their entire SNARE domains without the involvement of SNAP25. When SNAP25B is present in the complex, it creates a local interaction at the 0 (ionic) layer by cuffing Sx1A and Sb2. Force loading rate studies indicate that the ternary complex interaction is more stable than the Sx1A-Sb2 interaction.
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Affiliation(s)
- W Liu
- Department of Physics, University of California, Riverside, California 92521, USA
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35
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Gooding JJ. Biosensor technology for detecting biological warfare agents: Recent progress and future trends. Anal Chim Acta 2006. [DOI: 10.1016/j.aca.2005.12.020] [Citation(s) in RCA: 87] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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36
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Scarlatos A, Welt BA, Cooper BY, Archer D, DeMarse T, Chau KV. Methods for Detecting Botulinum Toxin with Applicability to Screening Foods Against Biological Terrorist Attacks. J Food Sci 2005. [DOI: 10.1111/j.1365-2621.2005.tb11525.x] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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37
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Gfeller KY, Nugaeva N, Hegner M. Micromechanical oscillators as rapid biosensor for the detection of active growth of Escherichia coli. Biosens Bioelectron 2005; 21:528-33. [PMID: 16076445 DOI: 10.1016/j.bios.2004.11.018] [Citation(s) in RCA: 68] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2004] [Revised: 11/19/2004] [Accepted: 11/23/2004] [Indexed: 11/18/2022]
Abstract
A rapid biosensor for the detection of bacterial growth was developed using micromechanical oscillators coated by common nutritive layers. The change in resonance frequency as a function of the increasing mass on a cantilever array forms the basis of the detection scheme. The sensor is able to detect active growth of Escherichia coli cells within 1 h which is significantly faster than any conventional plating method which requires at least 24 h. The growth of E. coli was confirmed by scanning electron microscopy. This new sensing method for the detection of active bacterial growth allows future applications in, e.g., rapid antibiotic susceptibility testing by adding antibiotics to the nutritive layer.
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Affiliation(s)
- Karin Y Gfeller
- Institute of Physics, University of Basel, Klingelbergstrasse 82, CH-4056 Basel, Switzerland
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38
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Gfeller KY, Nugaeva N, Hegner M. Rapid biosensor for detection of antibiotic-selective growth of Escherichia coli. Appl Environ Microbiol 2005; 71:2626-31. [PMID: 15870354 PMCID: PMC1087570 DOI: 10.1128/aem.71.5.2626-2631.2005] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
A rapid biosensor for the detection of bacterial growth was developed using micromechanical oscillators coated in common nutritive layers. The change in resonance frequency as a function of the increasing mass on a cantilever array forms the basis of the detection scheme. The calculated mass sensitivity according to the mechanical properties of the cantilever sensor is approximately 50 pg/Hz; this mass corresponds to an approximate sensitivity of approximately 100 Escherichia coli cells. The sensor is able to detect active growth of E. coli cells within 1 h. The starting number of E. coli cells initially attached to the sensor cantilever was, on average, approximately 1,000 cells. Furthermore, this method allows the detection of selective growth of E. coli within only 2 h by adding antibiotics to the nutritive layers. The growth of E. coli was confirmed by scanning electron microscopy. This new sensing method for the detection of selective bacterial growth allows future applications in, e.g., rapid antibiotic susceptibility testing.
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Affiliation(s)
- Karin Y Gfeller
- Institute of Physics, University of Basel, Klingelbergstrasse 82, CH-4056 Basel, Switzerland
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