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Oubohssaine M, Hnini M, Rabeh K. Phospholipid signaling in plant growth and development: Insights, biotechnological implications and future directions. JOURNAL OF PLANT PHYSIOLOGY 2025; 307:154454. [PMID: 40015232 DOI: 10.1016/j.jplph.2025.154454] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/26/2024] [Revised: 02/03/2025] [Accepted: 02/17/2025] [Indexed: 03/01/2025]
Abstract
Phospholipid signaling is essential for plant growth and development, orchestrating cellular membrane dynamics and regulating physiological processes critical for environmental adaptation. Phosphatidic acid (PA) plays diverse roles in key plant functions, including facilitating pollen tube growth, protecting against H2O2-induced cell death, and modulating actin cytoskeleton polymerization. Additionally, PA influences abscisic acid (ABA) signaling, impacting ionic flux, stomatal movement, and superoxide production. Phospholipase D (PLD) emerges as a crucial regulator, potentially linking and orchestrating microtubule reorganization. Saturated fatty acids, produced through phospholipase A (PLA) activity, also regulate various cellular processes. In Arabidopsis thaliana, Defender Against Apoptotic Death1 (DAD1), a plastidic PC-PLA1, supports jasmonic acid (JA) biosynthesis, which is essential for pollen maturation and flower development. Phospholipid signaling significantly influences stomatal function, with phospholipases modulating stomatal closure. This signaling pathway also plays a critical role in root development, where phosphocholine (PCho) and PA regulate root growth and tip growth of root hairs. This review highlights the pivotal role of phospholipid signaling pathways in coordinating plant growth, development, and responses to environmental cues. It explores the roles of PLD and PA in signal transduction and membrane degradation, particularly in seed aging. Additionally, it discusses the biotechnological applications of plant lipids, including genetic engineering for nutritional enhancement and biofuel production. Despite recent advancements, challenges such as low yield remain obstacles to the widespread adoption of biodiesel technology.
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Affiliation(s)
- Malika Oubohssaine
- Microbiology and Molecular Biology Team, Center of Plant and Microbial Biotechnology, Biodiversity and Environment, Faculty of Sciences, Mohammed V University in Rabat, Avenue Ibn Battouta, BP 1014, Rabat, 10000, Morocco.
| | - Mohamed Hnini
- Research Team in Science and Technology, High School of Technology Laayoune, Ibn Zohr University, Morocco
| | - Karim Rabeh
- Oasis System Research Unit, Regional Center of Agricultural Research of Errachidia, National Institute of Agricultural Research, PO. Box 415, Rabat, 10090, Morocco
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2
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Laxalt AM, van Hooren M, Munnik T. Plant PI-PLC signaling in stress and development. PLANT PHYSIOLOGY 2025; 197:kiae534. [PMID: 39928581 PMCID: PMC11809592 DOI: 10.1093/plphys/kiae534] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2024] [Accepted: 09/26/2024] [Indexed: 02/12/2025]
Abstract
Phosphoinositide-specific phospholipase C (PI-PLC) signaling is involved in various plant stress and developmental responses. Though several aspects of this lipid signaling pathway are conserved within animals and plants, clear differences have also emerged. While animal PLC signaling is characterized by the hydrolysis of PIP2 and production of IP3 and DAG as second messengers to activate Ca2+ and PKC signaling, plant PI-PLCs seem to predominantly use PIP as substrate and convert IP2 and DAG into inositolpolyphosphates and phosphatidic acid (PA) as plant second messengers. Sequencing of multiple plant genomes confirmed that plant PLC signaling evolved differently from animals, lacking homologs of the IP3 gated-Ca2+ channel, PKC and TRP channels, and with PLC enzymes resembling the PLCζ subfamily, which lacks the conserved PH domain that binds PIP2. With emerging tools in plant molecular biology, data analyses, and advanced imaging, plant PLC signaling is ready to gain momentum.
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Affiliation(s)
- Ana M Laxalt
- Instituto de Investigaciones Biológicas, IIB-CONICET, Universidad Nacional de Mar del Plata, Argentina
| | - Max van Hooren
- Plant Cell Biologie, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, The Netherlands
| | - Teun Munnik
- Plant Cell Biologie, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, The Netherlands
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3
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Teixeira RT, Marchese D, Duckney PJ, Dias FV, Carapeto AP, Louro M, Silva MS, Cordeiro C, Rodrigues MS, Malhó R. Functional characterization reveals the importance of Arabidopsis ECA4 and EPSIN3 in clathrin mediated endocytosis and wall structure in apical growing cells. THE NEW PHYTOLOGIST 2025; 245:1056-1071. [PMID: 39555685 DOI: 10.1111/nph.20282] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2024] [Accepted: 10/26/2024] [Indexed: 11/19/2024]
Abstract
Localized clathrin mediated endocytosis is vital for secretion and wall deposition in apical growing plant cells. Adaptor and signalling proteins, along with phosphoinositides, are known to play a regulatory, yet poorly defined role in this process. Here we investigated the function of Arabidopsis ECA4 and EPSIN3, putative mediators of the process, in pollen tubes and root hairs. Homozygous eca4 and epsin3 plants exhibited altered pollen tube morphology (in vitro) and self-pollination led to fewer seeds and shorter siliques. These effects were augmented in eca4/epsin3 double mutant and quantitative polymerase chain reaction data revealed changes in phosphoinositide metabolism and flowering genes suggestive of a synergistic action. No visible changes were observed in root morphology, but atomic force microscopy in mutant root hairs showed altered structural stiffness. Imaging and FRET-FLIM analysis of ECA4 and EPSIN3 X-FP constructs revealed that both proteins interact at the plasma membrane but exhibit slightly different intracellular localization. FT-ICR-MS metabolomic analysis of mutant cells showed changes in lipids, amino acids and carbohydrate composition consistent with a role in secretion and growth. Characterization of double mutants of eca4 and epsin3 with phospholipase C genes (plc5, plc7) indicates that phosphoinositides (e.g. PtdIns(4,5)P2) are fundamental for a combined and complementary role of ECA4-EPSIN3 in cell secretion.
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Affiliation(s)
- Rita Teresa Teixeira
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisboa, Portugal
| | - Dario Marchese
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisboa, Portugal
| | | | - Fernando Vaz Dias
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisboa, Portugal
| | - Ana P Carapeto
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisboa, Portugal
| | - Mariana Louro
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisboa, Portugal
| | - Marta Sousa Silva
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisboa, Portugal
| | - Carlos Cordeiro
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisboa, Portugal
| | - Mário S Rodrigues
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisboa, Portugal
| | - Rui Malhó
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisboa, Portugal
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Fritz C, Reimann TM, Adler J, Knab J, Schulmeister S, Kriechbaum C, Müller S, Parmryd I, Kost B. Plasma membrane and cytoplasmic compartmentalization: A dynamic structural framework required for pollen tube tip growth. PLANT PHYSIOLOGY 2024; 197:kiae558. [PMID: 39446406 DOI: 10.1093/plphys/kiae558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2024] [Accepted: 09/28/2024] [Indexed: 12/24/2024]
Abstract
Rapid, unidirectional pollen tube tip growth is essential for fertilization and widely employed as a model of polar cell expansion, a process crucial for plant morphogenesis. Different proteins and lipids with key functions in the control of polar cell expansion are associated with distinct domains of the plasma membrane (PM) at the pollen tube tip. These domains need to be dynamically maintained during tip growth, which depends on massive secretory and endocytic membrane trafficking. Very little is currently known about the molecular and cellular mechanisms responsible for the compartmentalization of the pollen tube PM. To provide a reliable structural framework for the further characterization of these mechanisms, an integrated quantitative map was compiled of the relative positions in normally growing Nicotiana tabacum (tobacco) pollen tubes of PM domains (i) enriched in key signaling proteins or lipids, (ii) displaying high membrane order, or (iii) in contact with cytoplasmic structures playing important roles in apical membrane trafficking. Previously identified secretory and endocytic PM domains were also included in this map. Internalization of regulatory proteins or lipids associated with PM regions overlapping with the lateral endocytic domain was assessed based on brefeldin A treatment. These analyses revealed remarkable aspects of the structural organization of tobacco pollen tube tips, which (i) enhance our understanding of cellular and regulatory processes underlying tip growth and (ii) highlight important areas of future research.
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Affiliation(s)
- Carolin Fritz
- Division of Cell Biology, Department of Biology, Friedrich-Alexander-University of Erlangen-Nürnberg, Erlangen, Germany
| | - Theresa Maria Reimann
- Division of Cell Biology, Department of Biology, Friedrich-Alexander-University of Erlangen-Nürnberg, Erlangen, Germany
| | - Jeremy Adler
- Department of Medical Biochemistry and Cell Biology, Institute of Biomedicine, University of Gothenburg, Gothenburg, Sweden
| | - Johanna Knab
- Division of Cell Biology, Department of Biology, Friedrich-Alexander-University of Erlangen-Nürnberg, Erlangen, Germany
| | - Sylwia Schulmeister
- Division of Cell Biology, Department of Biology, Friedrich-Alexander-University of Erlangen-Nürnberg, Erlangen, Germany
| | - Choy Kriechbaum
- Division of Cell Biology, Department of Biology, Friedrich-Alexander-University of Erlangen-Nürnberg, Erlangen, Germany
| | - Sabine Müller
- Division of Cell Biology, Department of Biology, Friedrich-Alexander-University of Erlangen-Nürnberg, Erlangen, Germany
| | - Ingela Parmryd
- Department of Medical Biochemistry and Cell Biology, Institute of Biomedicine, University of Gothenburg, Gothenburg, Sweden
| | - Benedikt Kost
- Division of Cell Biology, Department of Biology, Friedrich-Alexander-University of Erlangen-Nürnberg, Erlangen, Germany
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Kong W, Duan P, Wang Y, Zhang T, Huang M, Kang J, Wang L, Wei B, Chang Y. Silencing CaPIP5K4-1 leads to decreased male fertility in Capsicum annuum L. PLANTA 2024; 261:7. [PMID: 39630306 DOI: 10.1007/s00425-024-04584-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2024] [Accepted: 11/26/2024] [Indexed: 01/16/2025]
Abstract
MAIN CONCLUSION Phosphatidylinositol 4-phosphate 5-kinase gene CaPIP5K4-1 is highly expressed in the pepper anthers. Virus-induced gene silencing of CaPIP5K4-1 leads to reduced male fertility in pepper. The phosphatidylinositol 4-phosphate 5-kinase (PIP5K) is a pivotal enzyme in the phosphatidylinositol signaling pathway, and its crucial involvement in both plant development and stress response has been established. Here, we found that the expression of CaPIP5K4-1 in pepper was significantly higher in the fertile flower buds compared to sterile flower buds. Furthermore, its expression was validated in anthers and pollens by qRT-PCR and RNA-ISH assays, respectively. Its GFP fusion protein was mainly located on the plasma membrane. Silencing CaPIP5K4-1 in fertile pepper accessions resulted in wrinkled pollen grain cell walls, decreased pollen germination efficiency, and inhibited pollen tube growth. The transcription levels of multiple genes in the phosphatidylinositol signaling pathway were also assessed. Five phospholipase C (PLC) genes were downregulated in silenced plants. On the contrary, inositol phosphatase SAC and phosphatase and tensin homolog (PTEN) were upregulated. This study reported the role of CaPIP5K4-1 in pepper male fertility and provided insights into the regulatory mechanisms of PI signaling in pepper.
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Affiliation(s)
- Weifu Kong
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730030, China
| | - Panpan Duan
- Vegetable Institute, Gansu Academy of Agricultural Sciences, Lanzhou, 730070, Gansu, China
| | - Yuhang Wang
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730030, China
| | - Tao Zhang
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730030, China
| | - Mianzhu Huang
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730030, China
| | - Jingtao Kang
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730030, China
| | - Lina Wang
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730030, China
| | - Bingqiang Wei
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730030, China.
| | - Yajun Chang
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing Botanical Garden, Mem. Sun Yat-Sen, Nanjing, 210014, China.
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Song J, Mavraganis I, Shen W, Yang H, Patterson N, Wang L, Xiang D, Cui Y, Zou J. Pistil-derived lipids influence pollen tube growth and male fertility in Arabidopsis thaliana. PLANT PHYSIOLOGY 2024; 196:763-772. [PMID: 38917229 DOI: 10.1093/plphys/kiae276] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 04/16/2024] [Accepted: 04/16/2024] [Indexed: 06/27/2024]
Abstract
Pollen germination and pollen tube elongation require rapid phospholipid production and remodeling in membrane systems that involve both de novo synthesis and turnover. Phosphatidic acid phosphohydrolase (PAH) and lysophosphatidylcholine acyltransferase (LPCAT) are 2 key enzymes in membrane lipid maintenance. PAH generates diacylglycerol (DAG), a necessary precursor for the de novo synthesis of phosphatidylcholine (PC), while LPCAT reacylates lysophosphatidylcholine to PC and plays an essential role in the remodeling of membrane lipids. In this study, we investigated the synthetic defects of pah and lpcat mutations in sexual reproduction of Arabidopsis (Arabidopsis thaliana) and explored the prospect of pistil lipid provision to pollen tube growth. The combined deficiencies of lpcat and pah led to decreased pollen tube growth in the pistil and reduced male transmission. Interestingly, pistils of the lipid mutant dgat1 ameliorated the male transmission deficiencies of pah lpcat pollen. In contrast, pollination with a nonspecific phospholipase C (NPC) mutant exacerbated the fertilization impairment of the pah lpcat pollen. Given the importance of DAG in lipid metabolism and its contrasting changes in the dgat1 and npc mutants, we further investigated whether DAG supplement in synthetic media could influence pollen performance. DAG was incorporated into phospholipids of germinating pollen and stimulated pollen tube growth. Our study provides evidence that pistil-derived lipids contribute to membrane lipid synthesis in pollen tube growth, a hitherto unknown role in synergistic pollen-pistil interactions.
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Affiliation(s)
- Jingpu Song
- Aquatic and Crop Resource Development Research Centre, National Research Council of Canada, Saskatoon, Saskatchewan, Canada S7N 0W9
| | - Ioannis Mavraganis
- Aquatic and Crop Resource Development Research Centre, National Research Council of Canada, Saskatoon, Saskatchewan, Canada S7N 0W9
| | - Wenyun Shen
- Aquatic and Crop Resource Development Research Centre, National Research Council of Canada, Saskatoon, Saskatchewan, Canada S7N 0W9
| | - Hui Yang
- Aquatic and Crop Resource Development Research Centre, National Research Council of Canada, Saskatoon, Saskatchewan, Canada S7N 0W9
| | - Nii Patterson
- Aquatic and Crop Resource Development Research Centre, National Research Council of Canada, Saskatoon, Saskatchewan, Canada S7N 0W9
| | - Liping Wang
- Department of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada N1G 2W1
| | - Daoquan Xiang
- Aquatic and Crop Resource Development Research Centre, National Research Council of Canada, Saskatoon, Saskatchewan, Canada S7N 0W9
| | - Yuhai Cui
- London Research and Development Centre, Agriculture and Agri-Food Canada, London, ON, Canada N5V 4T3
- Department of Biology, Western University, London, ON, Canada N6A 5B7
| | - Jitao Zou
- Aquatic and Crop Resource Development Research Centre, National Research Council of Canada, Saskatoon, Saskatchewan, Canada S7N 0W9
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Zhou L, Asad MAU, Guan X, Pan G, Zhang Y, Cheng F. Rice myo-inositol-3-phosphate synthase 2 (RINO2) alleviates heat injury-induced impairment in pollen germination and tube growth by modulating Ca 2+ signaling and actin filament cytoskeleton. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024; 119:861-878. [PMID: 38761097 DOI: 10.1111/tpj.16802] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Revised: 04/24/2024] [Accepted: 04/30/2024] [Indexed: 05/20/2024]
Abstract
Low phytic acid (lpa) crop is considered as an effective strategy to improve crop nutritional quality, but a substantial decrease in phytic acid (PA) usually has negative effect on agronomic performance and its response to environment adversities. Myo-inositol-3-phosphate synthase (MIPS) is the rate-limiting enzyme in PA biosynthesis pathway, and regarded as the prime target for engineering lpa crop. In this paper, the rice MIPS gene (RINO2) knockout mutants and its wild type were performed to investigate the genotype-dependent alteration in the heat injury-induced spikelet fertility and its underlying mechanism for rice plants being imposed to heat stress at anthesis. Results indicated that RINO2 knockout significantly enhanced the susceptibility of rice spikelet fertility to heat injury, due to the severely exacerbated obstacles in pollen germination and pollen tube growth in pistil for RINO2 knockout under high temperature (HT) at anthesis. The loss of RINO2 function caused a marked reduction in inositol and phosphatidylinositol derivative concentrations in the HT-stressed pollen grains, which resulted in the strikingly lower content of phosphatidylinositol 4,5-diphosphate (PI (4,5) P2) in germinating pollen grain and pollen tube. The insufficient supply of PI (4,5) P2 in the HT-stressed pollen grains disrupted normal Ca2+ gradient in the apical region of pollen tubes and actin filament cytoskeleton in growing pollen tubes. The severely repressed biosynthesis of PI (4,5) P2 was among the regulatory switch steps leading to the impaired pollen germination and deformed pollen tube growth for the HT-stressed pollens of RINO2 knockout mutants.
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Affiliation(s)
- Lujian Zhou
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Muhammad-Asad-Ullah Asad
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Xianyue Guan
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Gang Pan
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Yan Zhang
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Fangmin Cheng
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China
- Collaborative Innovation Centre for Modern Crop Production Co-sponsored by Province and Ministry, Nanjing, 210095, China
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Kato M, Watari M, Tsuge T, Zhong S, Gu H, Qu LJ, Fujiwara T, Aoyama T. Redundant function of the Arabidopsis phosphatidylinositol 4-phosphate 5-kinase genes PIP5K4-6 is essential for pollen germination. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024; 117:212-225. [PMID: 37828913 DOI: 10.1111/tpj.16490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Revised: 08/02/2023] [Accepted: 09/05/2023] [Indexed: 10/14/2023]
Abstract
Phosphatidylinositol 4-phosphate 5-kinase (PIP5K) is a key enzyme producing the signaling lipid phosphatidylinositol 4,5-bisphosphate [PtdIns(4,5)P2 ] in eukaryotes. Although PIP5K genes are reported to be involved in pollen tube germination and growth, the essential roles of PIP5K in these processes remain unclear. Here, we performed a comprehensive genetic analysis of the Arabidopsis thaliana PIP5K4, PIP5K5, and PIP5K6 genes and revealed that their redundant function is essential for pollen germination. Pollen with the pip5k4pip5k5pip5k6 triple mutation was sterile, while pollen germination efficiency and pollen tube growth were reduced in the pip5k6 single mutant and further reduced in the pip5k4pip5k6 and pip5k5pip5k6 double mutants. YFP-fusion proteins, PIP5K4-YFP, PIP5K5-YFP, and PIP5K6-YFP, which could rescue the sterility of the triple mutant pollen, preferentially localized to the tricolpate aperture area and the future germination site on the plasma membrane prior to germination. Triple mutant pollen grains under the germination condition, in which spatiotemporal localization of the PtdIns(4,5)P2 fluorescent marker protein 2xmCHERRY-2xPHPLC as seen in the wild type was abolished, exhibited swelling and rupture of the pollen wall, but neither the conspicuous protruding site nor site-specific deposition of cell wall materials for germination. These data indicate that PIP5K4-6 and their product PtdIns(4,5)P2 are essential for pollen germination, possibly through the establishment of the germination polarity in a pollen grain.
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Affiliation(s)
- Mariko Kato
- Institute for Chemical Research, Kyoto University, Uji, Kyoto, 611-0011, Japan
| | - Machiko Watari
- Institute for Chemical Research, Kyoto University, Uji, Kyoto, 611-0011, Japan
| | - Tomohiko Tsuge
- Institute for Chemical Research, Kyoto University, Uji, Kyoto, 611-0011, Japan
| | - Sheng Zhong
- Peking-Tsinghua Center for Life Sciences, College of Life Sciences, Peking University, Beijing, 100871, China
| | - Hongya Gu
- Peking-Tsinghua Center for Life Sciences, College of Life Sciences, Peking University, Beijing, 100871, China
| | - Li-Jia Qu
- Peking-Tsinghua Center for Life Sciences, College of Life Sciences, Peking University, Beijing, 100871, China
| | - Takashi Fujiwara
- Institute for Chemical Research, Kyoto University, Uji, Kyoto, 611-0011, Japan
| | - Takashi Aoyama
- Institute for Chemical Research, Kyoto University, Uji, Kyoto, 611-0011, Japan
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Li C, Zhao A, Yu Y, Cui C, Zeng Q, Shen W, Zhao Y, Wang F, Dong J, Gao X, Yang M. Exploring the Role of TaPLC1-2B in Heat Tolerance at Seedling and Adult Stages of Wheat through Transcriptome Analysis. Int J Mol Sci 2023; 24:16583. [PMID: 38068906 PMCID: PMC10706844 DOI: 10.3390/ijms242316583] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 11/15/2023] [Accepted: 11/17/2023] [Indexed: 12/18/2023] Open
Abstract
Heat stress is a major abiotic stress that can cause serious losses of a crop. Our previous work identified a gene involved in heat stress tolerance in wheat, TaPLC1-2B. To further investigate its mechanisms, in the present study, TaPLC1-2B RNAi-silenced transgenic wheat and the wild type were comparatively analyzed at both the seedling and adult stages, with or without heat stress, using transcriptome sequencing. A total of 15,549 differentially expressed genes (DEGs) were identified at the adult stage and 20,535 DEGs were detected at the seedling stage. After heat stress, an enrichment of pathways such as phytohormones and mitogen-activated protein kinase signaling was mainly found in the seedling stage, and pathways related to metabolism, glycerophospholipid metabolism, circadian rhythms, and ABC transporter were enriched in the adult stage. Auxin and abscisic acid were downregulated in the seedling stage and vice versa in the adult stage; and the MYB, WRKY, and no apical meristem gene families were downregulated in the seedling stage in response to heat stress and upregulated in the adult stage in response to heat stress. This study deepens our understanding of the mechanisms of TaPLC1-2B in regard to heat stress in wheat at the seedling and adult stages.
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Affiliation(s)
- Chenyang Li
- College of Agronomy, Northwest A&F University, Yangling, Xianyang 712100, China; (C.L.); (Y.Y.); (C.C.); (Q.Z.); (W.S.); (Y.Z.); (F.W.); (J.D.); (X.G.)
| | - Ahui Zhao
- College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China;
| | - Yan Yu
- College of Agronomy, Northwest A&F University, Yangling, Xianyang 712100, China; (C.L.); (Y.Y.); (C.C.); (Q.Z.); (W.S.); (Y.Z.); (F.W.); (J.D.); (X.G.)
| | - Chao Cui
- College of Agronomy, Northwest A&F University, Yangling, Xianyang 712100, China; (C.L.); (Y.Y.); (C.C.); (Q.Z.); (W.S.); (Y.Z.); (F.W.); (J.D.); (X.G.)
| | - Quan Zeng
- College of Agronomy, Northwest A&F University, Yangling, Xianyang 712100, China; (C.L.); (Y.Y.); (C.C.); (Q.Z.); (W.S.); (Y.Z.); (F.W.); (J.D.); (X.G.)
| | - Wei Shen
- College of Agronomy, Northwest A&F University, Yangling, Xianyang 712100, China; (C.L.); (Y.Y.); (C.C.); (Q.Z.); (W.S.); (Y.Z.); (F.W.); (J.D.); (X.G.)
| | - Yang Zhao
- College of Agronomy, Northwest A&F University, Yangling, Xianyang 712100, China; (C.L.); (Y.Y.); (C.C.); (Q.Z.); (W.S.); (Y.Z.); (F.W.); (J.D.); (X.G.)
| | - Fei Wang
- College of Agronomy, Northwest A&F University, Yangling, Xianyang 712100, China; (C.L.); (Y.Y.); (C.C.); (Q.Z.); (W.S.); (Y.Z.); (F.W.); (J.D.); (X.G.)
| | - Jian Dong
- College of Agronomy, Northwest A&F University, Yangling, Xianyang 712100, China; (C.L.); (Y.Y.); (C.C.); (Q.Z.); (W.S.); (Y.Z.); (F.W.); (J.D.); (X.G.)
| | - Xiang Gao
- College of Agronomy, Northwest A&F University, Yangling, Xianyang 712100, China; (C.L.); (Y.Y.); (C.C.); (Q.Z.); (W.S.); (Y.Z.); (F.W.); (J.D.); (X.G.)
| | - Mingming Yang
- College of Agronomy, Northwest A&F University, Yangling, Xianyang 712100, China; (C.L.); (Y.Y.); (C.C.); (Q.Z.); (W.S.); (Y.Z.); (F.W.); (J.D.); (X.G.)
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10
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Wang C, Cheng H, Xu W, Xue J, Hua X, Tong G, Ma X, Yang C, Lan X, Shen SY, Yang Z, Huang J, Cheng Y. Arabidopsis pollen-specific glycerophosphodiester phosphodiesterase-like genes are essential for pollen tube tip growth. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2023; 65:2001-2017. [PMID: 37014030 DOI: 10.1111/jipb.13490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2022] [Accepted: 03/31/2023] [Indexed: 05/09/2023]
Abstract
In angiosperms, pollen tube growth is critical for double fertilization and seed formation. Many of the factors involved in pollen tube tip growth are unknown. Here, we report the roles of pollen-specific GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE-LIKE (GDPD-LIKE) genes in pollen tube tip growth. Arabidopsis thaliana GDPD-LIKE6 (AtGDPDL6) and AtGDPDL7 were specifically expressed in mature pollen grains and pollen tubes and green fluorescent protein (GFP)-AtGDPDL6 and GFP-AtGDPDL7 fusion proteins were enriched at the plasma membrane at the apex of forming pollen tubes. Atgdpdl6 Atgdpdl7 double mutants displayed severe sterility that was rescued by genetic complementation with AtGDPDL6 or AtGDPDL7. This sterility was associated with defective male gametophytic transmission. Atgdpdl6 Atgdpdl7 pollen tubes burst immediately after initiation of pollen germination in vitro and in vivo, consistent with the thin and fragile walls in their tips. Cellulose deposition was greatly reduced along the mutant pollen tube tip walls, and the localization of pollen-specific CELLULOSE SYNTHASE-LIKE D1 (CSLD1) and CSLD4 was impaired to the apex of mutant pollen tubes. A rice pollen-specific GDPD-LIKE protein also contributed to pollen tube tip growth, suggesting that members of this family have conserved functions in angiosperms. Thus, pollen-specific GDPD-LIKEs mediate pollen tube tip growth, possibly by modulating cellulose deposition in pollen tube walls.
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Affiliation(s)
- Chong Wang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, 150040, China
| | - Hao Cheng
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, 150040, China
| | - Wenjing Xu
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, 150040, China
| | - Jingshi Xue
- Shanghai Key Laboratory of Plant Molecular Sciences, Shanghai Normal University, Shanghai, 200234, China
| | - Xinguo Hua
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, 150040, China
| | - Guimin Tong
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, 150040, China
| | - Xujun Ma
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, 150040, China
| | - Chuanping Yang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, 150040, China
| | - Xingguo Lan
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, 150040, China
- College of Life Sciences, Northeast Forestry University, Harbin, 150040, China
| | - Shi-Yi Shen
- Shanghai Key Laboratory of Plant Molecular Sciences, Shanghai Normal University, Shanghai, 200234, China
| | - Zhongnan Yang
- Shanghai Key Laboratory of Plant Molecular Sciences, Shanghai Normal University, Shanghai, 200234, China
| | - Jirong Huang
- Shanghai Key Laboratory of Plant Molecular Sciences, Shanghai Normal University, Shanghai, 200234, China
| | - Yuxiang Cheng
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, 150040, China
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11
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Zarreen F, Kumar K, Chakraborty S. Phosphoinositides in plant-pathogen interaction: trends and perspectives. STRESS BIOLOGY 2023; 3:4. [PMID: 37676371 PMCID: PMC10442044 DOI: 10.1007/s44154-023-00082-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2022] [Accepted: 02/15/2023] [Indexed: 09/08/2023]
Abstract
Phosphoinositides are important regulatory membrane lipids, with a role in plant development and cellular function. Emerging evidence indicates that phosphoinositides play crucial roles in plant defence and are also utilized by pathogens for infection. In this review, we highlight the role of phosphoinositides in plant-pathogen interaction and the implication of this remarkable convergence in the battle against plant diseases.
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Affiliation(s)
- Fauzia Zarreen
- Molecular Virology Laboratory, School of Life Science, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Kamal Kumar
- Molecular Virology Laboratory, School of Life Science, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Supriya Chakraborty
- Molecular Virology Laboratory, School of Life Science, Jawaharlal Nehru University, New Delhi, 110067, India.
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12
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Sugi N, Izumi R, Tomomi S, Susaki D, Kinoshita T, Maruyama D. Removal of the endoplasma membrane upon sperm cell activation after pollen tube discharge. FRONTIERS IN PLANT SCIENCE 2023; 14:1116289. [PMID: 36778680 PMCID: PMC9909283 DOI: 10.3389/fpls.2023.1116289] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Accepted: 01/17/2023] [Indexed: 06/18/2023]
Abstract
In pollen and pollen tubes, immotile sperm cells are enclosed by an inner vegetative plasma membrane (IVPM), a single endomembrane originating from the vegetative-cell plasma membrane. It is widely believed that sperm cells must be removed from the IVPM prior to gamete associations and fusions; however, details of the timing and morphological changes upon IVPM dissociation remain elusive. Here, we report a rapid IVPM breakdown immediately before double fertilization in Arabidopsis thaliana. The IVPM was stably observed in coiling pollen tubes when pollen tube discharge was prevented using lorelei mutant ovules. In contrast, a semi-in vivo fertilization assay in wild-type ovules demonstrated fragmented IVPM around sperm nuclei 1 min after pollen tube discharge. These observations revealed the dynamic alteration of released sperm cells and provided new insights into double fertilization in flowering plants. With a summary of recent findings on IVPM lipid composition, we discussed the possible physiological signals controlling IVPM breakdown.
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13
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Laureano G, Santos C, Gouveia C, Matos AR, Figueiredo A. Grapevine-Associated Lipid Signalling Is Specifically Activated in an Rpv3 Background in Response to an Aggressive P. viticola Pathovar. Cells 2023; 12:394. [PMID: 36766736 PMCID: PMC9913531 DOI: 10.3390/cells12030394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Revised: 01/04/2023] [Accepted: 01/19/2023] [Indexed: 01/24/2023] Open
Abstract
Vitis vinifera L. is highly susceptible to the biotrophic pathogen Plasmopara viticola. To control the downy mildew disease, several phytochemicals are applied every season. Recent European Union requirements to reduce the use of chemicals in viticulture have made it crucial to use alternative and more sustainable approaches to control this disease. Our previous studies pinpoint the role of fatty acids and lipid signalling in the establishment of an incompatible interaction between grapevine and P. viticola. To further understand the mechanisms behind lipid involvement in an effective defence response we have analysed the expression of several genes related to lipid metabolism in three grapevine genotypes: Chardonnay (susceptible); Regent (tolerant), harbouring an Rpv3-1 resistance loci; and Sauvignac (resistant) that harbours a pyramid of Rpv12 and Rpv3-1 resistance loci. A highly aggressive P. viticola isolate was used (NW-10/16). Moreover, we have characterised the grapevine phospholipases C and D gene families and monitored fatty acid modulation during infection. Our results indicate that both susceptible and resistant grapevine hosts did not present wide fatty acid or gene expression modulation. The modulation of genes associated with lipid signalling and fatty acids seems to be specific to Regent, which raises the hypothesis of being specifically linked to the Rpv3 loci. In Sauvignac, the Rpv12 may be dominant concerning the defence response, and, thus, this genotype may present the activation of other pathways rather than lipid signalling.
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14
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Stroppa N, Onelli E, Moreau P, Maneta-Peyret L, Berno V, Cammarota E, Ambrosini R, Caccianiga M, Scali M, Moscatelli A. Sterols and Sphingolipids as New Players in Cell Wall Building and Apical Growth of Nicotiana tabacum L. Pollen Tubes. PLANTS (BASEL, SWITZERLAND) 2022; 12:8. [PMID: 36616135 PMCID: PMC9824051 DOI: 10.3390/plants12010008] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/19/2022] [Revised: 12/05/2022] [Accepted: 12/12/2022] [Indexed: 06/17/2023]
Abstract
Pollen tubes are tip-growing cells that create safe routes to convey sperm cells to the embryo sac for double fertilization. Recent studies have purified and biochemically characterized detergent-insoluble membranes from tobacco pollen tubes. These microdomains, called lipid rafts, are rich in sterols and sphingolipids and are involved in cell polarization in organisms evolutionarily distant, such as fungi and mammals. The presence of actin in tobacco pollen tube detergent-insoluble membranes and the preferential distribution of these domains on the apical plasma membrane encouraged us to formulate the intriguing hypothesis that sterols and sphingolipids could be a "trait d'union" between actin dynamics and polarized secretion at the tip. To unravel the role of sterols and sphingolipids in tobacco pollen tube growth, we used squalestatin and myriocin, inhibitors of sterol and sphingolipid biosynthesis, respectively, to determine whether lipid modifications affect actin fringe morphology and dynamics, leading to changes in clear zone organization and cell wall deposition, thus suggesting a role played by these lipids in successful fertilization.
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Affiliation(s)
- Nadia Stroppa
- Dipartimento di Bioscienze, Università degli Studi di Milano, Via Celoria 26, 20133 Milan, Italy
| | - Elisabetta Onelli
- Dipartimento di Bioscienze, Università degli Studi di Milano, Via Celoria 26, 20133 Milan, Italy
| | - Patrick Moreau
- CNRS, Laboratoire de Biogenèse Membranaire, University of Bordeaux, UMR 5200, 71 Avenue Edouard Bourlaux, 33140 Villenave d’Ornon, France
| | - Lilly Maneta-Peyret
- CNRS, Laboratoire de Biogenèse Membranaire, University of Bordeaux, UMR 5200, 71 Avenue Edouard Bourlaux, 33140 Villenave d’Ornon, France
| | - Valeria Berno
- ALEMBIC Advanced Light and Electron Microscopy BioImaging Center, San Raffaele Scientific Institute, DIBIT 1, Via Olgettina 58, 20132 Milan, Italy
| | - Eugenia Cammarota
- ALEMBIC Advanced Light and Electron Microscopy BioImaging Center, San Raffaele Scientific Institute, DIBIT 1, Via Olgettina 58, 20132 Milan, Italy
| | - Roberto Ambrosini
- Dipartimento di Scienze e Politiche Ambientali, Università degli Studi di Milano, Via Celoria 26, 20133 Milan, Italy
| | - Marco Caccianiga
- Dipartimento di Bioscienze, Università degli Studi di Milano, Via Celoria 26, 20133 Milan, Italy
| | - Monica Scali
- Dipartimento di Scienze della Vita, Università degli Studi di Siena, Via Aldo Moro 2, 53100 Siena, Italy
| | - Alessandra Moscatelli
- Dipartimento di Bioscienze, Università degli Studi di Milano, Via Celoria 26, 20133 Milan, Italy
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15
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Kastner C, Wagner VC, Fratini M, Dobritzsch D, Fuszard M, Heilmann M, Heilmann I. The pollen-specific class VIII-myosin ATM2 from Arabidopsis thaliana associates with the plasma membrane through a polybasic region binding anionic phospholipids. Biochimie 2022; 203:65-76. [DOI: 10.1016/j.biochi.2022.10.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 10/04/2022] [Accepted: 10/06/2022] [Indexed: 11/02/2022]
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16
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Li Z, Luo D, Tang M, Cao S, Pan J, Zhang W, Hu Y, Yue J, Huang Z, Li R, Chen P. Integrated Methylome and Transcriptome Analysis Provides Insights into the DNA Methylation Underlying the Mechanism of Cytoplasmic Male Sterility in Kenaf ( Hibiscus cannabinus L.). Int J Mol Sci 2022; 23:ijms23126864. [PMID: 35743303 PMCID: PMC9224340 DOI: 10.3390/ijms23126864] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Revised: 06/14/2022] [Accepted: 06/18/2022] [Indexed: 11/16/2022] Open
Abstract
Cytoplasmic male sterility (CMS) is widely exploited in hybrid seed production. Kenaf is an important fiber crop with high heterosis. The molecular mechanism of kenaf CMS remains unclear, particularly in terms of DNA methylation. Here, using the anthers of a kenaf CMS line (P3A) and its maintainer line (P3B), comparative physiological, DNA methylation, and transcriptome analyses were performed. The results showed that P3A had considerably lower levels of IAA, ABA, photosynthetic products and ATP contents than P3B. DNA methylome analysis revealed 650 differentially methylated genes (DMGs) with 313 up- and 337 down methylated, and transcriptome analysis revealed 1788 differentially expressed genes (DEGs) with 558 up- and 1230 downregulated genes in P3A compared with P3B. Moreover, 45 genes were characterized as both DEGs and DMGs, including AUX,CYP, BGL3B, SUS6, AGL30 and MYB21. Many DEGs may be regulated by related DMGs based on methylome and transcriptome studies. These DEGs were involved in carbon metabolism, plant hormone signal transduction, the TCA cycle and the MAPK signaling pathway and were shown to be important for CMS in kenaf. These results provide new insights into the epigenetic mechanism of CMS in kenaf and other crops.
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Affiliation(s)
- Zengqiang Li
- Key Laboratory of Plant Genetics and Breeding, College of Agriculture, Guangxi University, Nanning 530004, China; (Z.L.); (D.L.); (M.T.); (S.C.); (J.P.); (W.Z.); (Y.H.); (J.Y.); (Z.H.)
- Henan Collaborative Innovation Center of Modern Biological Breeding, Henan Institute of Science and Technology, Xinxiang 453003, China
| | - Dengjie Luo
- Key Laboratory of Plant Genetics and Breeding, College of Agriculture, Guangxi University, Nanning 530004, China; (Z.L.); (D.L.); (M.T.); (S.C.); (J.P.); (W.Z.); (Y.H.); (J.Y.); (Z.H.)
| | - Meiqiong Tang
- Key Laboratory of Plant Genetics and Breeding, College of Agriculture, Guangxi University, Nanning 530004, China; (Z.L.); (D.L.); (M.T.); (S.C.); (J.P.); (W.Z.); (Y.H.); (J.Y.); (Z.H.)
| | - Shan Cao
- Key Laboratory of Plant Genetics and Breeding, College of Agriculture, Guangxi University, Nanning 530004, China; (Z.L.); (D.L.); (M.T.); (S.C.); (J.P.); (W.Z.); (Y.H.); (J.Y.); (Z.H.)
| | - Jiao Pan
- Key Laboratory of Plant Genetics and Breeding, College of Agriculture, Guangxi University, Nanning 530004, China; (Z.L.); (D.L.); (M.T.); (S.C.); (J.P.); (W.Z.); (Y.H.); (J.Y.); (Z.H.)
| | - Wenxian Zhang
- Key Laboratory of Plant Genetics and Breeding, College of Agriculture, Guangxi University, Nanning 530004, China; (Z.L.); (D.L.); (M.T.); (S.C.); (J.P.); (W.Z.); (Y.H.); (J.Y.); (Z.H.)
| | - Yali Hu
- Key Laboratory of Plant Genetics and Breeding, College of Agriculture, Guangxi University, Nanning 530004, China; (Z.L.); (D.L.); (M.T.); (S.C.); (J.P.); (W.Z.); (Y.H.); (J.Y.); (Z.H.)
| | - Jiao Yue
- Key Laboratory of Plant Genetics and Breeding, College of Agriculture, Guangxi University, Nanning 530004, China; (Z.L.); (D.L.); (M.T.); (S.C.); (J.P.); (W.Z.); (Y.H.); (J.Y.); (Z.H.)
| | - Zhen Huang
- Key Laboratory of Plant Genetics and Breeding, College of Agriculture, Guangxi University, Nanning 530004, China; (Z.L.); (D.L.); (M.T.); (S.C.); (J.P.); (W.Z.); (Y.H.); (J.Y.); (Z.H.)
| | - Ru Li
- College of Life Science & Technology, Guangxi University, Nanning 530004, China;
| | - Peng Chen
- Key Laboratory of Plant Genetics and Breeding, College of Agriculture, Guangxi University, Nanning 530004, China; (Z.L.); (D.L.); (M.T.); (S.C.); (J.P.); (W.Z.); (Y.H.); (J.Y.); (Z.H.)
- Correspondence: ; Tel.: +86-155-7894-7886
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17
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Annum N, Ahmed M, Imtiaz K, Mansoor S, Tester M, Saeed NA. 32P i Labeled Transgenic Wheat Shows the Accumulation of Phosphatidylinositol 4,5-bisphosphate and Phosphatidic Acid Under Heat and Osmotic Stress. FRONTIERS IN PLANT SCIENCE 2022; 13:881188. [PMID: 35774812 PMCID: PMC9237509 DOI: 10.3389/fpls.2022.881188] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/22/2022] [Accepted: 05/16/2022] [Indexed: 06/15/2023]
Abstract
The ensuing heat stress drastically affects wheat plant growth and development, consequently compromising its grain yield. There are many thermoregulatory processes/mechanisms mediated by ion channels, lipids, and lipid-modifying enzymes that occur in the plasma membrane and the chloroplast. With the onset of abiotic or biotic stresses, phosphoinositide-specific phospholipase C (PI-PLC), as a signaling enzyme, hydrolyzes phosphatidylinositol 4,5-bisphosphate (PIP2) to generate inositol 1,4,5-trisphosphate (IP3) and diacylglycerol (DAG) which is further phosphorylated into phosphatidic acid (PA) as a secondary messenger and is involved in multiple processes. In the current study, a phospholipase C (PLC) signaling pathway was investigated in spring wheat (Triticum aestivum L.) and evaluated its four AtPLC5 overexpressed (OE)/transgenic lines under heat and osmotic stresses through 32Pi radioactive labeling. Naturally, the wheat harbors only a small amount of PIP2. However, with the sudden increase in temperature (40°C), PIP2 levels start to rise within 7.5 min in a time-dependent manner in wild-type (Wt) wheat. While the Phosphatidic acid (PA) level also elevated up to 1.6-fold upon exposing wild-type wheat to heat stress (40°C). However, at the anthesis stage, a significant increase of ∼4.5-folds in PIP2 level was observed within 30 min at 40°C in AtPLC5 over-expressed wheat lines. Significant differences in PIP2 level were observed in Wt and AtPLC5-OE lines when treated with 1200 mM sorbitol solution. It is assumed that the phenomenon might be a result of the activation of PLC/DGK pathways. Together, these results indicate that heat stress and osmotic stress activate several lipid responses in wild-type and transgenic wheat and can explain heat and osmotic stress tolerance in the wheat plant.
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Affiliation(s)
- Nazish Annum
- Wheat Biotechnology Lab, Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Constituent College Pakistan Institute of Engineering and Applied Sciences, Faisalabad, Pakistan
| | - Moddassir Ahmed
- Wheat Biotechnology Lab, Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Constituent College Pakistan Institute of Engineering and Applied Sciences, Faisalabad, Pakistan
| | - Khadija Imtiaz
- Wheat Biotechnology Lab, Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Constituent College Pakistan Institute of Engineering and Applied Sciences, Faisalabad, Pakistan
| | - Shahid Mansoor
- Wheat Biotechnology Lab, Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Constituent College Pakistan Institute of Engineering and Applied Sciences, Faisalabad, Pakistan
| | - Mark Tester
- Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Nasir A. Saeed
- Wheat Biotechnology Lab, Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Constituent College Pakistan Institute of Engineering and Applied Sciences, Faisalabad, Pakistan
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18
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Çetinbaş-Genç A, Conti V, Cai G. Let's shape again: the concerted molecular action that builds the pollen tube. PLANT REPRODUCTION 2022; 35:77-103. [PMID: 35041045 DOI: 10.1007/s00497-022-00437-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2021] [Accepted: 01/06/2022] [Indexed: 06/14/2023]
Abstract
The pollen tube is being subjected to control by a complex network of communication that regulates its shape and the misfunction of a single component causes specific deformations. In flowering plants, the pollen tube is a tubular extension of the pollen grain required for successful sexual reproduction. Indeed, maintaining the unique shape of the pollen tube is essential for the pollen tube to approach the embryo sac. Many processes and molecules (such as GTPase activity, phosphoinositides, Ca2+ gradient, distribution of reactive oxygen species and nitric oxide, nonuniform pH values, organization of the cytoskeleton, balance between exocytosis and endocytosis, and cell wall structure) play key and coordinated roles in maintaining the cylindrical shape of pollen tubes. In addition, the above factors must also interact with each other so that the cell shape is maintained while the pollen tube follows chemical signals in the pistil that guide it to the embryo sac. Any intrinsic changes (such as erroneous signals) or extrinsic changes (such as environmental stresses) can affect the above factors and thus fertilization by altering the tube morphology. In this review, the processes and molecules that enable the development and maintenance of the unique shape of pollen tubes in angiosperms are presented emphasizing their interaction with specific tube shape. Thus, the purpose of the review is to investigate whether specific deformations in pollen tubes can help us to better understand the mechanism underlying pollen tube shape.
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Affiliation(s)
- Aslıhan Çetinbaş-Genç
- Department of Biology, Marmara University, Göztepe Campus, 34722, Kadıköy, Istanbul, Turkey.
| | - Veronica Conti
- Department of Life Sciences, University of Siena, via Mattioli 4, 53100, Siena, Italy
| | - Giampiero Cai
- Department of Life Sciences, University of Siena, via Mattioli 4, 53100, Siena, Italy
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19
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Lin Z, Xie F, Triviño M, Zhao T, Coppens F, Sterck L, Bosch M, Franklin-Tong VE, Nowack MK. Self-incompatibility requires GPI anchor remodeling by the poppy PGAP1 ortholog HLD1. Curr Biol 2022; 32:1909-1923.e5. [PMID: 35316654 DOI: 10.1016/j.cub.2022.02.072] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Revised: 01/25/2022] [Accepted: 02/24/2022] [Indexed: 11/25/2022]
Abstract
Glycosylphosphatidylinositol-anchored proteins (GPI-APs) are tethered to the outer leaflet of the plasma membrane where they function as key regulators of a plethora of biological processes in eukaryotes. Self-incompatibility (SI) plays a pivotal role regulating fertilization in higher plants through recognition and rejection of "self" pollen. Here, we used Arabidopsis thaliana lines that were engineered to be self-incompatible by expression of Papaver rhoeas SI determinants for an SI suppressor screen. We identify HLD1/AtPGAP1, an ortholog of the human GPI-inositol deacylase PGAP1, as a critical component required for the SI response. Besides a delay in flowering time, no developmental defects were observed in HLD1/AtPGAP1 knockout plants, but SI was completely abolished. We demonstrate that HLD1/AtPGAP1 functions as a GPI-inositol deacylase and that this GPI-remodeling activity is essential for SI. Using GFP-SKU5 as a representative GPI-AP, we show that the HLD1/AtPGAP1 mutation does not affect GPI-AP production and targeting but affects their cleavage and release from membranes in vivo. Our data not only implicate GPI-APs in SI, providing new directions to investigate SI mechanisms, but also identify a key functional role for GPI-AP remodeling by inositol deacylation in planta.
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Affiliation(s)
- Zongcheng Lin
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent 9052, Belgium; Center for Plant Systems Biology, VIB, Ghent 9052, Belgium; Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University, Wuhan 430070, China.
| | - Fei Xie
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent 9052, Belgium; Center for Plant Systems Biology, VIB, Ghent 9052, Belgium
| | - Marina Triviño
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent 9052, Belgium; Center for Plant Systems Biology, VIB, Ghent 9052, Belgium; Institute of Biological, Environmental and Rural Sciences (IBERS), Aberystwyth University, Gogerddan, Aberystwyth SY23 3EB, UK
| | - Tao Zhao
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Frederik Coppens
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent 9052, Belgium; Center for Plant Systems Biology, VIB, Ghent 9052, Belgium
| | - Lieven Sterck
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent 9052, Belgium; Center for Plant Systems Biology, VIB, Ghent 9052, Belgium
| | - Maurice Bosch
- Institute of Biological, Environmental and Rural Sciences (IBERS), Aberystwyth University, Gogerddan, Aberystwyth SY23 3EB, UK.
| | | | - Moritz K Nowack
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent 9052, Belgium; Center for Plant Systems Biology, VIB, Ghent 9052, Belgium.
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20
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Scholz P, Pejchar P, Fernkorn M, Škrabálková E, Pleskot R, Blersch K, Munnik T, Potocký M, Ischebeck T. DIACYLGLYCEROL KINASE 5 regulates polar tip growth of tobacco pollen tubes. THE NEW PHYTOLOGIST 2022; 233:2185-2202. [PMID: 34931304 DOI: 10.1111/nph.17930] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2021] [Accepted: 12/06/2021] [Indexed: 06/14/2023]
Abstract
Pollen tubes require a tightly regulated pectin secretion machinery to sustain the cell wall plasticity required for polar tip growth. Involved in this regulation at the apical plasma membrane are proteins and signaling molecules, including phosphoinositides and phosphatidic acid (PA). However, the contribution of diacylglycerol kinases (DGKs) is not clear. We transiently expressed tobacco DGKs in pollen tubes to identify a plasma membrane (PM)-localized isoform, and then to study its effect on pollen tube growth, pectin secretion and lipid signaling. In order to potentially downregulate DGK5 function, we overexpressed an inactive variant. Only one of eight DGKs displayed a confined localization at the apical PM. We could demonstrate its enzymatic activity and that a kinase-dead variant was inactive. Overexpression of either variant led to differential perturbations including misregulation of pectin secretion. One mode of regulation could be that DGK5-formed PA regulates phosphatidylinositol 4-phosphate 5-kinases, as overexpression of the inactive DGK5 variant not only led to a reduction of PA but also of phosphatidylinositol 4,5-bisphosphate levels and suppressed related growth phenotypes. We conclude that DGK5 is an additional player of polar tip growth that regulates pectin secretion probably in a common pathway with PI4P 5-kinases.
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Affiliation(s)
- Patricia Scholz
- Department of Plant Biochemistry, Albrecht-von-Haller-Institute for Plant Sciences and Göttingen Center for Molecular Biosciences (GZMB), University of Göttingen, Göttingen, 37077, Germany
| | - Přemysl Pejchar
- Institute of Experimental Botany of the Czech Academy of Sciences, Prague, 16502, Czech Republic
| | - Max Fernkorn
- Department of Plant Biochemistry, Albrecht-von-Haller-Institute for Plant Sciences and Göttingen Center for Molecular Biosciences (GZMB), University of Göttingen, Göttingen, 37077, Germany
| | - Eliška Škrabálková
- Institute of Experimental Botany of the Czech Academy of Sciences, Prague, 16502, Czech Republic
- Department of Experimental Plant Biology, Charles University, Prague, 12844, Czech Republic
| | - Roman Pleskot
- Institute of Experimental Botany of the Czech Academy of Sciences, Prague, 16502, Czech Republic
| | - Katharina Blersch
- Department of Plant Biochemistry, Albrecht-von-Haller-Institute for Plant Sciences and Göttingen Center for Molecular Biosciences (GZMB), University of Göttingen, Göttingen, 37077, Germany
- Green Biotechnology, Institute of Plant Biology and Biotechnology (IBBP), University of Münster, Münster, 48143, Germany
| | - Teun Munnik
- Plant Cell Biology, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, 1000 BE, the Netherlands
| | - Martin Potocký
- Institute of Experimental Botany of the Czech Academy of Sciences, Prague, 16502, Czech Republic
| | - Till Ischebeck
- Department of Plant Biochemistry, Albrecht-von-Haller-Institute for Plant Sciences and Göttingen Center for Molecular Biosciences (GZMB), University of Göttingen, Göttingen, 37077, Germany
- Green Biotechnology, Institute of Plant Biology and Biotechnology (IBBP), University of Münster, Münster, 48143, Germany
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21
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Sagar S, Singh A. Emerging role of phospholipase C mediated lipid signaling in abiotic stress tolerance and development in plants. PLANT CELL REPORTS 2021; 40:2123-2133. [PMID: 34003316 DOI: 10.1007/s00299-021-02713-5] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2021] [Accepted: 05/08/2021] [Indexed: 06/12/2023]
Abstract
Environmental stimuli are primarily perceived at the plasma membrane. Stimuli perception leads to membrane disintegration and generation of molecules which trigger lipid signaling. In plants, lipid signaling regulates important biological functions however, the molecular mechanism involved is unclear. Phospholipases C (PLCs) are important lipid-modifying enzymes in eukaryotes. In animals, PLCs by hydrolyzing phospholipids, such as phosphatidylinositol-4,5-bisphosphate [PI(4,5)P2] generate diacylglycerol (DAG) and inositol- 1,4,5-trisphosphate (IP3). However, in plants their phosphorylated variants i.e., phosphatidic acid (PA) and inositol hexakisphosphate (IP6) are proposed to mediate lipid signaling. Specific substrate preferences divide PLCs into phosphatidylinositol-PLC (PI-PLC) and non-specific PLCs (NPC). PLC activity is regulated by various cellular factors including, calcium (Ca2+) concentration, phospholipid substrate, and post-translational modifications. Both PI-PLCs and NPCs are implicated in plants' response to stresses and development. Emerging evidences show that PLCs regulate structural and developmental features, like stomata movement, microtubule organization, membrane remodelling and root development under abiotic stresses. Thus, crucial insights are provided into PLC mediated regulatory mechanism of abiotic stress responses in plants. In this review, we describe the structure and regulation of plant PLCs. In addition, cellular and physiological roles of PLCs in abiotic stresses, phosphorus deficiency, aluminium toxicity, pollen tube growth, and root development are discussed.
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Affiliation(s)
- Sushma Sagar
- National Institute of Plant Genome Research, New Delhi, 110067, India
| | - Amarjeet Singh
- National Institute of Plant Genome Research, New Delhi, 110067, India.
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22
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Rausche J, Stenzel I, Stauder R, Fratini M, Trujillo M, Heilmann I, Rosahl S. A phosphoinositide 5-phosphatase from Solanum tuberosum is activated by PAMP-treatment and may antagonize phosphatidylinositol 4,5-bisphosphate at Phytophthora infestans infection sites. THE NEW PHYTOLOGIST 2021; 229:469-487. [PMID: 32762082 DOI: 10.1111/nph.16853] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2018] [Accepted: 07/27/2020] [Indexed: 06/11/2023]
Abstract
Potato (Solanum tuberosum) plants susceptible to late blight disease caused by the oomycete Phytophthora infestans display enhanced resistance upon infiltration with the pathogen-associated molecular pattern (PAMP), Pep-13. Here, we characterize a potato gene similar to Arabidopsis 5-phosphatases which was identified in transcript arrays performed to identify Pep-13 regulated genes, and termed StIPP. Recombinant StIPP protein specifically dephosphorylated the D5-position of phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2 ) in vitro. Other phosphoinositides or soluble inositolpolyphosphates were not converted. When transiently expressed in tobacco (Nicotiana tabacum) pollen tubes, a StIPP-YFP fusion localized to the subapical plasma membrane and antagonized PtdIns(4,5)P2 -dependent effects on cell morphology, indicating in vivo functionality. Phytophthora infestans-infection of N. benthamiana leaf epidermis cells resulted in relocalization of StIPP-GFP from the plasma membrane to the extra-haustorial membrane (EHM). Colocalizion with the effector protein RFP-AvrBlb2 at infection sites is consistent with a role of StIPP in the plant-oomycete interaction. Correlation analysis of fluorescence distributions of StIPP-GFP and biosensors for PtdIns(4,5)P2 or phosphatidylinositol 4-phosphate (PtdIns4P) indicate StIPP activity predominantly at the EHM. In Arabidopsis protoplasts, expression of StIPP resulted in the stabilization of the PAMP receptor, FLAGELLIN-SENSITIVE 2, indicating that StIPP may act as a PAMP-induced and localized antagonist of PtdIns(4,5)P2 -dependent processes during plant immunity.
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Affiliation(s)
- Juliane Rausche
- Department of Stress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Weinberg 3, Halle (Saale), D-06120, Germany
| | - Irene Stenzel
- Department of Cellular Biochemistry, Institute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, Kurt Mothes-Str. 3, Halle (Saale), D-06120, Germany
| | - Ron Stauder
- Department of Stress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Weinberg 3, Halle (Saale), D-06120, Germany
| | - Marta Fratini
- Department of Cellular Biochemistry, Institute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, Kurt Mothes-Str. 3, Halle (Saale), D-06120, Germany
| | - Marco Trujillo
- Independent Research Group Protein Ubiquitinylation, Leibniz Institute of Plant Biochemistry, Weinberg 3, Halle (Saale), D-06120, Germany
| | - Ingo Heilmann
- Department of Cellular Biochemistry, Institute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, Kurt Mothes-Str. 3, Halle (Saale), D-06120, Germany
| | - Sabine Rosahl
- Department of Stress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Weinberg 3, Halle (Saale), D-06120, Germany
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23
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McCollum C, Engelhardt S, Weiss L, Hückelhoven R. ROP INTERACTIVE PARTNER b Interacts with RACB and Supports Fungal Penetration into Barley Epidermal Cells. PLANT PHYSIOLOGY 2020; 184:823-836. [PMID: 32665335 PMCID: PMC7536699 DOI: 10.1104/pp.20.00742] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Accepted: 06/29/2020] [Indexed: 06/11/2023]
Abstract
Rho of Plants (ROP) G-proteins are key components of cell polarization processes in plant development. The barley (Hordeum vulgare) ROP protein RACB is a susceptibility factor in the interaction of barley with the barley powdery mildew fungus Blumeria graminis f. sp. hordei (Bgh). RACB also drives polar cell development, and this function might be coopted during the formation of fungal haustoria in barley epidermal cells. To understand RACB signaling during the interaction of barley with Bgh, we searched for potential downstream interactors of RACB. Here, we show that ROP INTERACTIVE PARTNER b (RIPb; synonym: INTERACTOR OF CONSTITUTIVE ACTIVE ROP b) directly interacts with RACB in yeast and in planta. Overexpression of RIPb supports the susceptibility of barley to Bgh RIPb further interacts with itself at microtubules. However, the interaction with activated RACB largely takes place at the plasma membrane. Both RIPb and RACB are recruited to the site of fungal attack around the neck of developing haustoria, suggesting locally enhanced ROP activity. We further assigned different functions to different domains of the RIPb protein. The N-terminal coiled-coil CC1 domain is required for microtubule localization, while the C-terminal coiled-coil CC2 domain is sufficient to interact with RACB and to fulfill a function in susceptibility at the plasma membrane. Hence, RIPb appears to be localized at microtubules and is then recruited by activated RACB for a function at the plasma membrane during formation of the haustorial complex.
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Affiliation(s)
- Christopher McCollum
- Phytopathology, School of Life Science Weihenstephan, Technical University of Munich, 85354 Freising, Germany
| | - Stefan Engelhardt
- Phytopathology, School of Life Science Weihenstephan, Technical University of Munich, 85354 Freising, Germany
| | - Lukas Weiss
- Phytopathology, School of Life Science Weihenstephan, Technical University of Munich, 85354 Freising, Germany
| | - Ralph Hückelhoven
- Phytopathology, School of Life Science Weihenstephan, Technical University of Munich, 85354 Freising, Germany
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24
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Scholz P, Anstatt J, Krawczyk HE, Ischebeck T. Signalling Pinpointed to the Tip: The Complex Regulatory Network That Allows Pollen Tube Growth. PLANTS (BASEL, SWITZERLAND) 2020; 9:E1098. [PMID: 32859043 PMCID: PMC7569787 DOI: 10.3390/plants9091098] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Revised: 08/18/2020] [Accepted: 08/23/2020] [Indexed: 12/13/2022]
Abstract
Plants display a complex life cycle, alternating between haploid and diploid generations. During fertilisation, the haploid sperm cells are delivered to the female gametophyte by pollen tubes, specialised structures elongating by tip growth, which is based on an equilibrium between cell wall-reinforcing processes and turgor-driven expansion. One important factor of this equilibrium is the rate of pectin secretion mediated and regulated by factors including the exocyst complex and small G proteins. Critically important are also non-proteinaceous molecules comprising protons, calcium ions, reactive oxygen species (ROS), and signalling lipids. Among the latter, phosphatidylinositol 4,5-bisphosphate and the kinases involved in its formation have been assigned important functions. The negatively charged headgroup of this lipid serves as an interaction point at the apical plasma membrane for partners such as the exocyst complex, thereby polarising the cell and its secretion processes. Another important signalling lipid is phosphatidic acid (PA), that can either be formed by the combination of phospholipases C and diacylglycerol kinases or by phospholipases D. It further fine-tunes pollen tube growth, for example by regulating ROS formation. How the individual signalling cues are intertwined or how external guidance cues are integrated to facilitate directional growth remain open questions.
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Affiliation(s)
- Patricia Scholz
- Department of Plant Biochemistry, Albrecht-von-Haller-Institute for Plant Sciences and Goettingen Center for Molecular Biosciences (GZMB), University of Goettingen, Justus-von-Liebig Weg 11, D-37077 Goettingen, Germany; (J.A.); (H.E.K.)
| | | | | | - Till Ischebeck
- Department of Plant Biochemistry, Albrecht-von-Haller-Institute for Plant Sciences and Goettingen Center for Molecular Biosciences (GZMB), University of Goettingen, Justus-von-Liebig Weg 11, D-37077 Goettingen, Germany; (J.A.); (H.E.K.)
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25
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Kiba A, Nakano M, Hosokawa M, Galis I, Nakatani H, Shinya T, Ohnishi K, Hikichi Y. Phosphatidylinositol-phospholipase C2 regulates pattern-triggered immunity in Nicotiana benthamiana. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:5027-5038. [PMID: 32412590 PMCID: PMC7410187 DOI: 10.1093/jxb/eraa233] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2019] [Accepted: 05/11/2020] [Indexed: 05/27/2023]
Abstract
Phospholipid signaling plays an important role in plant immune responses against phytopathogenic bacteria in Nicotiana benthamiana. Here, we isolated two phospholipase C2 (PLC2) orthologs in the N. benthamiana genome, designated as PLC2-1 and 2-2. Both NbPLC2-1 and NbPLC2-2 were expressed in most tissues and were induced by infiltration with bacteria and flg22. NbPLC2-1 and NbPLC2-2 (NbPLC2s) double-silenced plants showed a moderately reduced growth phenotype. The induction of the hypersensitive response was not affected, but bacterial growth and the appearance of bacterial wilt were accelerated in NbPLC2s-silenced plants when they were challenged with a virulent strain of Ralstonia solanacearum that was compatible with N. benthamiana. NbPLC2s-silenced plants showed reduced expression levels of NbPR-4, a marker gene for jasmonic acid signaling, and decreased jasmonic acid and jasmonoyl-L-isoleucine contents after inoculation with R. solanacearum. The induction of pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI) marker genes was reduced in NbPLC2s-silenced plants after infiltration with R. solanacearum or Pseudomonas fluorescens. Accordingly, the resistance induced by flg22 was compromised in NbPLC2s-silenced plants. In addition, the expression of flg22-induced PTI marker genes, the oxidative burst, stomatal closure, and callose deposition were all reduced in the silenced plants. Thus, NbPLC2s might have important roles in pre- and post-invasive defenses, namely in the induction of PTI.
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Affiliation(s)
- Akinori Kiba
- Laboratory of Plant Pathology and Biotechnology, Faculty of Agriculture, Kochi University, Nankoku, Kochi, Japan
| | - Masahito Nakano
- Laboratory of Plant Pathology and Biotechnology, Faculty of Agriculture, Kochi University, Nankoku, Kochi, Japan
- Okayama Prefectural Technology Center for Agriculture, Forestry, and Fisheries, 7549–1 Kibichuo-cho, Kaga-gun, Okayama, Japan
| | - Miki Hosokawa
- Laboratory of Plant Pathology and Biotechnology, Faculty of Agriculture, Kochi University, Nankoku, Kochi, Japan
| | - Ivan Galis
- Institute of Plant Science and Resources, Okayama University, Okayama, Japan
| | - Hiroko Nakatani
- Institute of Plant Science and Resources, Okayama University, Okayama, Japan
| | - Tomonori Shinya
- Institute of Plant Science and Resources, Okayama University, Okayama, Japan
| | - Kouhei Ohnishi
- Laboratory of Defense in Plant–Pathogen Interactions, Research Institute of Molecular Genetics, Kochi University, Nankoku, Kochi, Japan
| | - Yasufumi Hikichi
- Laboratory of Plant Pathology and Biotechnology, Faculty of Agriculture, Kochi University, Nankoku, Kochi, Japan
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26
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Angkawijaya AE, Nguyen VC, Gunawan F, Nakamura Y. A Pair of Arabidopsis Diacylglycerol Kinases Essential for Gametogenesis and Endoplasmic Reticulum Phospholipid Metabolism in Leaves and Flowers. THE PLANT CELL 2020; 32:2602-2620. [PMID: 32471859 PMCID: PMC7401011 DOI: 10.1105/tpc.20.00251] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Revised: 05/08/2020] [Accepted: 05/20/2020] [Indexed: 05/04/2023]
Abstract
Phosphatidic acid (PA) is a key phospholipid in glycerolipid metabolism and signaling. Diacylglycerol kinase (DGK) produces PA by phosphorylating diacylglycerol, a crucial step in PA metabolism. Although DGK activity is known to be involved in plant development and stress response, how specific DGK isoforms function in development and phospholipid metabolism remains elusive. Here, we showed that Arabidopsis (Arabidopsis thaliana) DGK2 and DGK4 are crucial for gametogenesis and biosynthesis of phosphatidylglycerol and phosphatidylinositol in the endoplasmic reticulum (ER). With comprehensive transcriptomic data of seven DGKs and genetic crossing, we found that dgk2-1/- dgk4-1/- plants were gametophyte lethal, although parental single homozygous plants were viable. The dgk2-1/+ dgk4-1/+ double heterozygote showed defective pollen tube growth and seed development because of nonviable mutant gametes. DGK2 and DGK4 were localized to the ER and were involved in PA production for pollen tube growth. Transgenic knockdown lines of DGK2 and DGK4 confirmed the gametophyte defect and also revealed defective leaf and root growth. Glycerolipid analysis in the knockdown lines showed that phosphatidylglycerol and phosphatidylinositol metabolism was affected differently in floral buds and leaves. These results suggest that DGK2 and DGK4 are essential during gametogenesis and are required for ER-localized phospholipid metabolism in vegetative and reproductive growth.
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Affiliation(s)
- Artik Elisa Angkawijaya
- Institute of Plant and Microbial Biology, Academia Sinica, 128 sec.2 Academia Road, Nankang, Taipei 11529, Taiwan
| | - Van Cam Nguyen
- Institute of Plant and Microbial Biology, Academia Sinica, 128 sec.2 Academia Road, Nankang, Taipei 11529, Taiwan
- Molecular and Biological Agricultural Sciences Program, Taiwan International Graduate Program, Academia Sinica and National Chung Hsing University, Taipei 11529, Taiwan
- Graduate Institute of Biotechnology, National Chung Hsing University, Taichung 40227, Taiwan
| | - Farrel Gunawan
- Institute of Plant and Microbial Biology, Academia Sinica, 128 sec.2 Academia Road, Nankang, Taipei 11529, Taiwan
| | - Yuki Nakamura
- Institute of Plant and Microbial Biology, Academia Sinica, 128 sec.2 Academia Road, Nankang, Taipei 11529, Taiwan
- Molecular and Biological Agricultural Sciences Program, Taiwan International Graduate Program, Academia Sinica and National Chung Hsing University, Taipei 11529, Taiwan
- Biotechnology Center, National Chung Hsing University, Taichung 40227, Taiwan
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27
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Grebnev G, Cvitkovic M, Fritz C, Cai G, Smith AS, Kost B. Quantitative Structural Organization of Bulk Apical Membrane Traffic in Pollen Tubes. PLANT PHYSIOLOGY 2020; 183:1559-1585. [PMID: 32482906 PMCID: PMC7401101 DOI: 10.1104/pp.20.00380] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2020] [Accepted: 05/15/2020] [Indexed: 05/13/2023]
Abstract
Pollen tube tip growth depends on balancing secretion of cell wall material with endocytic recycling of excess material incorporated into the plasma membrane (PM). The classical model of tip growth, which predicts bulk secretion, occurs apically, and is compensated by subapical endocytosis, has been challenged in recent years. Many signaling proteins and lipids with important functions in the regulation of membrane traffic underlying tip growth associate with distinct regions of the pollen tube PM, and understanding the mechanisms responsible for the targeting of these regulatory factors to specific PM domains requires quantitative information concerning the sites of bulk secretion and endocytosis. Here, we quantitatively characterized the spatial organization of membrane traffic during tip growth by analyzing steady-state distributions and dynamics of FM4-64-labeled lipids and YFP-tagged transmembrane (TM) proteins in tobacco (Nicotiana tabacum) pollen tubes growing normally or treated with Brefeldin A to block secretion. We established that (1) secretion delivers TM proteins and recycled membrane lipids to the same apical PM domain, and (2) FM4-64-labeled lipids, but not the analyzed TM proteins, undergo endocytic recycling within a clearly defined subapical region. We mathematically modeled the steady-state PM distributions of all analyzed markers to better understand differences between them and to support the experimental data. Finally, we mapped subapical F-actin fringe and trans-Golgi network positioning relative to sites of bulk secretion and endocytosis to further characterize functions of these structures in apical membrane traffic. Our results support and further define the classical model of apical membrane traffic at the tip of elongating pollen tubes.
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Affiliation(s)
- Gleb Grebnev
- Cell Biology, Department of Biology, Friedrich-Alexander-University Erlangen Nuremberg, 91058 Erlangen, Germany
| | - Mislav Cvitkovic
- PULS Group, Department of Physics, Friedrich-Alexander-University Erlangen Nuremberg, 91058 Erlangen, Germany
- Group for Computational Life Sciences, Division of Physical Chemistry, Ruđer Bošković Institute, 10000 Zagreb, Croatia
| | - Carolin Fritz
- Cell Biology, Department of Biology, Friedrich-Alexander-University Erlangen Nuremberg, 91058 Erlangen, Germany
| | - Giampiero Cai
- Department of Life Sciences, University of Siena, 53100 Siena, Italy
| | - Ana-Suncana Smith
- PULS Group, Department of Physics, Friedrich-Alexander-University Erlangen Nuremberg, 91058 Erlangen, Germany
- Group for Computational Life Sciences, Division of Physical Chemistry, Ruđer Bošković Institute, 10000 Zagreb, Croatia
| | - Benedikt Kost
- Cell Biology, Department of Biology, Friedrich-Alexander-University Erlangen Nuremberg, 91058 Erlangen, Germany
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28
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Phospholipid Signaling Is a Component of the Salicylic Acid Response in Plant Cell Suspension Cultures. Int J Mol Sci 2020; 21:ijms21155285. [PMID: 32722468 PMCID: PMC7432775 DOI: 10.3390/ijms21155285] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2020] [Revised: 07/21/2020] [Accepted: 07/22/2020] [Indexed: 01/31/2023] Open
Abstract
Salicylic acid (SA) is an important signaling molecule involved in plant defense. While many proteins play essential roles in SA signaling, increasing evidence shows that responses to SA appear to involve and require lipid signals. The phospholipid-generated signal transduction involves a family of enzymes that catalyze the hydrolysis or phosphorylation of phospholipids in membranes to generate signaling molecules, which are important in the plant cellular response. In this review, we focus first, the role of SA as a mitigator in biotic/abiotic stress. Later, we describe the experimental evidence supporting the phospholipid–SA connection in plant cells, emphasizing the roles of the secondary lipid messengers (phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidic acid (PA)) and related enzymes (phospholipase D (PLD) and phospholipase C (PLC)). By placing these recent finding in context of phospholipids and SA in plant cells, we highlight the role of phospholipids as modulators in the early steps of SA triggered transduction in plant cells.
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29
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Pejchar P, Sekereš J, Novotný O, Žárský V, Potocký M. Functional analysis of phospholipase Dδ family in tobacco pollen tubes. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2020; 103:212-226. [PMID: 32064689 DOI: 10.1111/tpj.14720] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2019] [Revised: 01/17/2020] [Accepted: 02/04/2020] [Indexed: 06/10/2023]
Abstract
Phosphatidic acid (PA), an important signalling and metabolic phospholipid, is predominantly localized in the subapical plasma membrane (PM) of growing pollen tubes. PA can be produced from structural phospholipids by phospholipase D (PLD), but the isoforms responsible for production of PM PA were not identified yet and their functional roles remain unknown. Following genome-wide bioinformatic analysis of the PLD family in tobacco, we focused on the pollen-overrepresented PLDδ class. Combining live-cell imaging, gene overexpression, lipid-binding and structural bioinformatics, we characterized five NtPLDδ isoforms. Distinct PLDδ isoforms preferentially localize to the cytoplasm or subapical PM. Using fluorescence recovery after photobleaching, domain deletion and swapping analyses we show that membrane-bound PLDδs are tightly bound to PM, primarily via the central catalytic domain. Overexpression analyses suggested isoform PLDδ3 as the most important member of the PLDδ subfamily active in pollen tubes. Moreover, only PLDδ3 shows significant constitutive PLD activity in vivo and, in turn, PA promotes binding of PLDδ3 to the PM. This forms a positive feedback loop leading to PA accumulation and the formation of massive PM invaginations. Tightly controlled production of PA generated by PLDδ3 at the PM is important for maintaining the balance between various membrane trafficking processes that are crucial for plant cell tip growth.
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Affiliation(s)
- Přemysl Pejchar
- Institute of Experimental Botany of the Czech Academy of Sciences, 16502, Prague 6, Czech Republic
| | - Juraj Sekereš
- Institute of Experimental Botany of the Czech Academy of Sciences, 16502, Prague 6, Czech Republic
| | - Ondřej Novotný
- Institute of Experimental Botany of the Czech Academy of Sciences, 16502, Prague 6, Czech Republic
- Department of Biochemistry and Microbiology, University of Chemistry and Technology Prague, 16628, Prague 6, Czech Republic
| | - Viktor Žárský
- Institute of Experimental Botany of the Czech Academy of Sciences, 16502, Prague 6, Czech Republic
- Department of Experimental Plant Biology, Charles University, 128 44, Prague 2, Czech Republic
| | - Martin Potocký
- Institute of Experimental Botany of the Czech Academy of Sciences, 16502, Prague 6, Czech Republic
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30
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Testing Pollen Tube Proteins for In Vivo Binding to Phosphatidic Acid by n-Butanol Treatment and Confocal Microscopy. Methods Mol Biol 2020. [PMID: 32529446 DOI: 10.1007/978-1-0716-0672-8_22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
Abstract
The general role of cellular membranes is to provide a barrier and to generate separate reaction spaces. However, additional functions of membrane domains enriched in certain classes of lipids have been discovered, which represent an important area of ongoing research. Such membrane domains can be found in cells at different size scales (e.g., nanodomains, microdomains), represent membrane regions with special physical properties and play important roles in the direct or indirect propagation of signaling processes. Domain formation within the plasma membrane (PM) does not only involve the accumulation of specific lipids, but also the recruitment of specific transmembrane or PM-associated peripheral proteins. Phosphatidic acid (PA) is increasingly recognized as an important signaling lipid and component of PM domains. This lipid is involved in the regulation not only of biotic or abiotic stress responses, but also of pollen tube tip growth and of other forms of polar cell expansion. Although many PA-binding proteins have been characterized, a conserved PA interaction motif could not be identified in these proteins. Consequently, protein binding to PA cannot be predicted based on sequence analysis, but has to be biochemically tested using lipid strip or liposome assays. Although these assays are often informative, they are generally based on the use of artificial model membranes, which compared to natural membranes contain fewer lipid types often at non-physiological concentrations. In this chapter, we describe an alternative in vivo assay that can be employed to analyze protein binding to PA at the PM of normally elongating tobacco pollen tubes. This assay is based on the use of n-butanol (n-ButOH), which inhibits phospholipase D (PLD) and thereby blocks a major biosynthetic pathway that generates PA within the PM from substrates like phosphatidylcholine (PC) or phosphatidylethanolamine (PE). PLD inhibition reduces the PA content of the PM and consequently the level of PM association of PA-binding proteins, which can be analyzed using fluorescence microscopy. Methods enabling n-ButOH treatment of cultured tobacco pollen tubes expressing YFP-tagged PA-binding proteins as well as the quantitative determination of the PM association of these proteins are described.
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31
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Asim M, Ullah Z, Xu F, An L, Aluko OO, Wang Q, Liu H. Nitrate Signaling, Functions, and Regulation of Root System Architecture: Insights from Arabidopsis thaliana. Genes (Basel) 2020; 11:E633. [PMID: 32526869 PMCID: PMC7348705 DOI: 10.3390/genes11060633] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2020] [Revised: 05/22/2020] [Accepted: 05/28/2020] [Indexed: 01/07/2023] Open
Abstract
Root system architecture (RSA) is required for the acquisition of water and mineral nutrients from the soil. One of the essential nutrients, nitrate (NO3-), is sensed and transported by nitrate transporters NRT1.1 and NRT2.1 in the plants. Nitrate transporter 1.1 (NRT1.1) is a dual-affinity nitrate transporter phosphorylated at the T101 residue by calcineurin B-like interacting protein kinase (CIPKs); it also regulates the expression of other key nitrate assimilatory genes. The differential phosphorylation (phosphorylation and dephosphorylation) strategies and underlying Ca2+ signaling mechanism of NRT1.1 stimulate lateral root growth by activating the auxin transport activity and Ca2+-ANR1 signaling at the plasma membrane and the endosomes, respectively. NO3- additionally functions as a signal molecule that forms a signaling system, which consists of a vast array of transcription factors that control root system architecture that either stimulate or inhibit lateral and primary root development in response to localized and high nitrate (NO3-), respectively. This review elucidates the so-far identified nitrate transporters, nitrate sensing, signal transduction, and the key roles of nitrate transporters and its downstream transcriptional regulatory network in the primary and lateral root development in Arabidopsis thaliana under stress conditions.
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Affiliation(s)
- Muhammad Asim
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (Z.U.); (L.A.); (O.O.A.)
- Graduate School of Chinese Academy of Agricultural Sciences, Beijing 100081, China;
| | - Zia Ullah
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (Z.U.); (L.A.); (O.O.A.)
- Graduate School of Chinese Academy of Agricultural Sciences, Beijing 100081, China;
| | - Fangzheng Xu
- Graduate School of Chinese Academy of Agricultural Sciences, Beijing 100081, China;
- Key Laboratory for Tobacco Gene Resources, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao 266101, China
| | - Lulu An
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (Z.U.); (L.A.); (O.O.A.)
- Graduate School of Chinese Academy of Agricultural Sciences, Beijing 100081, China;
| | - Oluwaseun Olayemi Aluko
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (Z.U.); (L.A.); (O.O.A.)
- Graduate School of Chinese Academy of Agricultural Sciences, Beijing 100081, China;
| | - Qian Wang
- Key Laboratory for Tobacco Gene Resources, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao 266101, China
| | - Haobao Liu
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (Z.U.); (L.A.); (O.O.A.)
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Abstract
Cell polarity in plants operates across a broad range of spatial and temporal scales to control processes from acute cell growth to systemic hormone distribution. Similar to other eukaryotes, plants generate polarity at both the subcellular and tissue levels, often through polarization of membrane-associated protein complexes. However, likely due to the constraints imposed by the cell wall and their extremely plastic development, plants possess novel polarity molecules and mechanisms highly tuned to environmental inputs. Considerable progress has been made in identifying key plant polarity regulators, but detailed molecular understanding of polarity mechanisms remains incomplete in plants. Here, we emphasize the striking similarities in the conceptual frameworks that generate polarity in both animals and plants. To this end, we highlight how novel, plant-specific proteins engage in common themes of positive feedback, dynamic intracellular trafficking, and posttranslational regulation to establish polarity axes in development. We end with a discussion of how environmental signals control intrinsic polarity to impact postembryonic organogenesis and growth.
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Affiliation(s)
- Andrew Muroyama
- Howard Hughes Medical Institute, Stanford University, Stanford, California 94305-5020, USA; .,Department of Biology, Stanford University, Stanford, California 94305-5020, USA
| | - Dominique Bergmann
- Howard Hughes Medical Institute, Stanford University, Stanford, California 94305-5020, USA; .,Department of Biology, Stanford University, Stanford, California 94305-5020, USA
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Abstract
Anionic phospholipids, which include phosphatidic acid, phosphatidylserine, and phosphoinositides, represent a small percentage of membrane lipids. They are able to modulate the physical properties of membranes, such as their surface charges, curvature, or clustering of proteins. Moreover, by mediating interactions with numerous membrane-associated proteins, they are key components in the establishment of organelle identity and dynamics. Finally, anionic lipids also act as signaling molecules, as they are rapidly produced or interconverted by a set of dedicated enzymes. As such, anionic lipids are major regulators of many fundamental cellular processes, including cell signaling, cell division, membrane trafficking, cell growth, and gene expression. In this review, we describe the functions of anionic lipids from a cellular perspective. Using the localization of each anionic lipid and its related metabolic enzymes as starting points, we summarize their roles within the different compartments of the endomembrane system and address their associated developmental and physiological consequences.
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Affiliation(s)
- Lise C Noack
- Laboratoire Reproduction et Développement des Plantes, Université de Lyon, École Normale Supérieure (ENS) de Lyon, L'Université Claude Bernard (UCB) Lyon 1, CNRS, INRAE, 69342 Lyon, France; ,
| | - Yvon Jaillais
- Laboratoire Reproduction et Développement des Plantes, Université de Lyon, École Normale Supérieure (ENS) de Lyon, L'Université Claude Bernard (UCB) Lyon 1, CNRS, INRAE, 69342 Lyon, France; ,
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Coordinated Localization and Antagonistic Function of NtPLC3 and PI4P 5-Kinases in the Subapical Plasma Membrane of Tobacco Pollen Tubes. PLANTS 2020; 9:plants9040452. [PMID: 32260253 PMCID: PMC7238183 DOI: 10.3390/plants9040452] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/12/2020] [Revised: 03/26/2020] [Accepted: 04/01/2020] [Indexed: 01/22/2023]
Abstract
Polar tip growth of pollen tubes is regulated by the membrane phospholipid phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2), which localizes in a well-defined region of the subapical plasma membrane. How the PtdIns(4,5)P2 region is maintained is currently unclear. In principle, the formation of PtdIns(4,5)P2 by PI4P 5-kinases can be counteracted by phospholipase C (PLC), which hydrolyzes PtdIns(4,5)P2. Here, we show that fluorescence-tagged tobacco NtPLC3 displays a subapical plasma membrane distribution which frames that of fluorescence-tagged PI4P 5-kinases, suggesting that NtPLC3 may modulate PtdIns(4,5)P2-mediated processes in pollen tubes. The expression of a dominant negative NtPLC3 variant resulted in pollen tube tip swelling, consistent with a delimiting effect on PtdIns(4,5)P2 production. When pollen tube morphologies were assessed as a quantitative read-out for PtdIns(4,5)P2 function, NtPLC3 reverted the effects of a coexpressed PI4P 5-kinase, demonstrating that NtPLC3-mediated breakdown of PtdIns(4,5)P2 antagonizes the effects of PtdIns(4,5)P2 overproduction in vivo. When analyzed by spinning disc microscopy, fluorescence-tagged NtPLC3 displayed discontinuous membrane distribution omitting punctate areas of the membrane, suggesting that NtPLC3 is involved in the spatial restriction of plasma membrane domains also at the nanodomain scale. Together, the data indicate that NtPLC3 may contribute to the spatial restriction of PtdIns(4,5)P2 in the subapical plasma membrane of pollen tubes.
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35
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Arabinogalactan protein-rare earth element complexes activate plant endocytosis. Proc Natl Acad Sci U S A 2019; 116:14349-14357. [PMID: 31239335 DOI: 10.1073/pnas.1902532116] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
Abstract
Endocytosis is essential to all eukaryotes, but how cargoes are selected for internalization remains poorly characterized. Extracellular cargoes are thought to be selected by transmembrane receptors that bind intracellular adaptors proteins to initiate endocytosis. Here, we report a mechanism for clathrin-mediated endocytosis (CME) of extracellular lanthanum [La(III)] cargoes, which requires extracellular arabinogalactan proteins (AGPs) that are anchored on the outer face of the plasma membrane. AGPs were colocalized with La(III) on the cell surface and in La(III)-induced endocytic vesicles in Arabidopsis leaf cells. Superresolution imaging showed that La(III) triggered AGP movement across the plasma membrane. AGPs were then colocalized and physically associated with the μ subunit of the intracellular adaptor protein 2 (AP2) complexes. The AGP-AP2 interaction was independent of CME, whereas AGP's internalization required CME and AP2. Moreover, we show that AGP-dependent endocytosis in the presence of La(III) also occurred in human cells. These findings indicate that extracellular AGPs act as conserved CME cargo receptors, thus challenging the current paradigm about endocytosis of extracellular cargoes.
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36
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Kaneda M, van Oostende-Triplet C, Chebli Y, Testerink C, Bednarek SY, Geitmann A. Plant AP180 N-Terminal Homolog Proteins Are Involved in Clathrin-Dependent Endocytosis during Pollen Tube Growth in Arabidopsis thaliana. PLANT & CELL PHYSIOLOGY 2019; 60:1316-1330. [PMID: 30796435 DOI: 10.1093/pcp/pcz036] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2018] [Accepted: 02/18/2019] [Indexed: 05/05/2023]
Abstract
Polarized cell growth in plants is maintained under the strict control and exquisitely choreographed balance of exocytic and endocytic membrane trafficking. The pollen tube has become a model system for rapid polar growth in which delivery of cell wall material and membrane recycling are controlled by membrane trafficking. Endocytosis plays an important role that is poorly understood. The plant AP180 N-Terminal Homolog (ANTH) proteins are putative homologs of Epsin 1 that recruits clathrin to phosphatidylinositol 4, 5-bisphosphate (PIP2) containing membranes to facilitate vesicle budding during endocytosis. Two Arabidopsis ANTH encoded by the genes AtAP180 and AtECA2 are highly expressed in pollen tubes. Pollen tubes from T-DNA inserted knockout mutant lines display significant morphological defects and unique pectin deposition. Fluorescent tagging reveals organization into dynamic foci located at the lateral flanks of the pollen tube. This precisely defined subapical domain coincides which clathrin-mediated endocytosis (CME) and PIP2 localization. Using a liposome-protein binding test, we showed that AtECA2 protein and ANTH domain recombinant proteins have strong affinity to PIP2 and phosphatidic acid containing liposomes in vitro. Taken together these data suggest that Arabidopsis ANTH proteins may play an important role in CME, proper cell wall assembly and morphogenesis.
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Affiliation(s)
- Minako Kaneda
- Institut de recherche en biologie v�g�tale, Universit� de Montr�al, 4101 Rue Sherbrooke Est, Montr�al, QC, Canada
| | - Chloï van Oostende-Triplet
- Institut de recherche en biologie v�g�tale, Universit� de Montr�al, 4101 Rue Sherbrooke Est, Montr�al, QC, Canada
- Present address: Cell Biology and Image Acquisition Core Facility, Faculty of Medicine, University of Ottawa, RGN 3171, 451 Smyth Road, Ottawa, ON, Canada
| | - Youssef Chebli
- Department of Plant Science, McGill University, Macdonald Campus, 21111 Lakeshore, Ste-Anne-de-Bellevue, Qu�bec, Canada
| | - Christa Testerink
- Section of Plant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, The Netherlands
- Present address: Laboratory of Plant Physiology, Wageningen University and Research, PB Wageningen, The Netherlands
| | | | - Anja Geitmann
- Institut de recherche en biologie v�g�tale, Universit� de Montr�al, 4101 Rue Sherbrooke Est, Montr�al, QC, Canada
- Department of Plant Science, McGill University, Macdonald Campus, 21111 Lakeshore, Ste-Anne-de-Bellevue, Qu�bec, Canada
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37
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Chen X, Li L, Xu B, Zhao S, Lu P, He Y, Ye T, Feng YQ, Wu Y. Phosphatidylinositol-specific phospholipase C2 functions in auxin-modulated root development. PLANT, CELL & ENVIRONMENT 2019; 42:1441-1457. [PMID: 30496625 DOI: 10.1111/pce.13492] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2018] [Revised: 11/08/2018] [Accepted: 11/24/2018] [Indexed: 05/11/2023]
Abstract
Nine phosphatidylinositol-specific phospholipases C (PLCs) have been identified in the Arabidopsis genome; among the importance of PLC2 in reproductive development is significant. However, the role of PLC2 in vegetative development such as in root growth is elusive. Here, we report that plc2 mutants displayed multiple auxin-defective phenotypes in root development, including short primary root, impaired root gravitropism, and inhibited root hair growth. The DR5:GUS expression and the endogenous indole-3-acetic acid (IAA) content, as well as the responses of a set of auxin-related genes to exogenous IAA treatment, were all decreased in plc2 seedlings, suggesting the influence of PLC2 on auxin accumulation and signalling. The root elongation of plc2 mutants was less sensitive to the high concentration of exogenous auxins, and the application of 1-naphthaleneacetic acid or the auxin transport inhibitor N-1-naphthylphthalamic acid could rescue the root hair growth of plc2 mutants. In addition, the PIN2 polarity and cycling in plc2 root epidermis cells were altered. These results demonstrate a critical role of PLC2 in auxin-mediated root development in Arabidopsis, in which PLC2 influences the polar distribution of PIN2.
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Affiliation(s)
- Xi Chen
- State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China
| | - Lin Li
- State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China
| | - Buxian Xu
- State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China
| | - Shujuan Zhao
- State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China
| | - Piaoying Lu
- State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China
| | - Yuqing He
- State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China
| | - Tiantian Ye
- State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China
- Key Laboratory of Analytical Chemistry for Biology and Medicine (Ministry of Education), Department of Chemistry, Wuhan University, Wuhan, China
| | - Yu-Qi Feng
- Key Laboratory of Analytical Chemistry for Biology and Medicine (Ministry of Education), Department of Chemistry, Wuhan University, Wuhan, China
| | - Yan Wu
- State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China
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38
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Vaz Dias F, Serrazina S, Vitorino M, Marchese D, Heilmann I, Godinho M, Rodrigues M, Malhó R. A role for diacylglycerol kinase 4 in signalling crosstalk during Arabidopsis pollen tube growth. THE NEW PHYTOLOGIST 2019; 222:1434-1446. [PMID: 30628082 DOI: 10.1111/nph.15674] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2018] [Accepted: 12/28/2018] [Indexed: 05/29/2023]
Abstract
Diacylglycerol kinases (DGKs) play a major role in the production of phosphatidic acid (PtdOH) and were implicated in endomembrane trafficking and signalling cascades. In plants, the role of DGKs is less clear, as PtdOH seems to arise mostly from phospholipase D activity. Here, we investigated the function of the Arabidopsis gene encoding DGK4, which is highly expressed in pollen. In vitro, pollen tubes from homozygous dgk4 plants showed normal morphology, but reduced growth rate and altered stiffness and adhesion properties (revealed by atomic force microscopy). In vivo, dgk4 pollen was able to fertilize wild-type ovules, but self-pollination in dgk4 plants led to fewer seeds and shorter siliques. Phenotypic analysis revealed that the dgk4 mutation affects not only the male germ line but also the vegetative tissue. DGK4-green fluorescent protein fusion imaging revealed a cytosolic localization with a slightly higher signal in the subapical or apical region. dgk4 pollen tubes were found to exhibit perturbations in membrane recycling, and lipid analysis revealed a minor increase of PtdOH concomitant with decreased phosphatidylcholine, compared with wild-type. In vitro, DGK4 was found to exhibit kinase and guanylyl cyclase activity. Quantitative PCR data revealed downregulation of genes related to actin dynamics and phosphoinositide metabolism in mutant pollen, but upregulation of the DGK6 isoform. Altogether, these results are discussed considering a role of DGK4 in signalling cross-talk.
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Affiliation(s)
- Fernando Vaz Dias
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisbon, Portugal
| | - Susana Serrazina
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisbon, Portugal
| | - Miguel Vitorino
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisbon, Portugal
| | - Dario Marchese
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisbon, Portugal
| | - Ingo Heilmann
- Institute of Biochemistry and Biotechnology/Cellular Biochemistry, Martin-Luther-University Halle-Wittenberg, 06120, Halle (Saale), Germany
| | - Margarida Godinho
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisbon, Portugal
| | - Mário Rodrigues
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisbon, Portugal
| | - Rui Malhó
- Faculdade de Ciências de Lisboa, BioISI, Universidade de Lisboa, 1749-016, Lisbon, Portugal
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39
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Takáč T, Novák D, Šamaj J. Recent Advances in the Cellular and Developmental Biology of Phospholipases in Plants. FRONTIERS IN PLANT SCIENCE 2019; 10:362. [PMID: 31024579 PMCID: PMC6459882 DOI: 10.3389/fpls.2019.00362] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2018] [Accepted: 03/08/2019] [Indexed: 05/05/2023]
Abstract
Phospholipases (PLs) are lipid-hydrolyzing enzymes known to have diverse signaling roles during plant abiotic and biotic stress responses. They catalyze lipid remodeling, which is required to generate rapid responses of plants to environmental cues. Moreover, they produce second messenger molecules, such as phosphatidic acid (PA) and thus trigger or modulate signaling cascades that lead to changes in gene expression. The roles of phospholipases in plant abiotic and biotic stress responses have been intensively studied. Nevertheless, emerging evidence suggests that they also make significant contributions to plants' cellular and developmental processes. In this mini review, we summarized recent advances in the study of the cellular and developmental roles of phospholipases in plants.
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Affiliation(s)
| | | | - Jozef Šamaj
- Department of Cell Biology, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University Olomouc, Olomouc, Czechia
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40
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Filipin EP, Pereira DT, Ouriques LC, Bouzon ZL, Simioni C. Participation of actin filaments, myosin and phosphatidylinositol 3-kinase in the formation and polarisation of tetraspore germ tube of Gelidium floridanum (Rhodophyta, Florideophyceae). PLANT BIOLOGY (STUTTGART, GERMANY) 2019; 21:352-360. [PMID: 30472775 DOI: 10.1111/plb.12946] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2018] [Accepted: 11/21/2018] [Indexed: 06/09/2023]
Abstract
This study aimed to examine the evidence of direct interaction among actin, myosin and phosphatidylinositol 3-kinase (PI3K) in the polarisation and formation of the tetraspore germ tube of Gelidium floridanum. After release, tetraspores were exposed to cytochalasin B, latrunculin B, LY294002 and BDM for a period of 6 h. In control samples, formation of the germ tube occurred after the experimental period, with cellulose formation and elongated chloroplasts moving through the tube region in the presence of F-actin. In the presence of cytochalasin B, an inhibitor of F-actin, latrunculin B, an inhibitor of G-actin, and BDM, a myosin inhibitor, tetraspores showed no formation of the germ tube or cellulose. Spherical-shaped chloroplasts were observed in the central region with a few F-actin filaments in the periphery of the cytoplasm. Tetraspores treated with LY294002, a PI3K inhibitor, showed no formation of the tube at the highest concentrations. Polarisation of cytoplasmic contents did not occur, only cellulose formation. It was concluded that F-actin directs the cell wall components and contributes to the maintenance of chloroplast shape and elongation during germ tube formation. PI3K plays a fundamental role in signalling for the asymmetric polarisation of F-actin. Thus, F-actin regulates the polarisation and germination processes of tetraspores of G. floridanum.
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Affiliation(s)
- E P Filipin
- Plant Cell Biology Laboratory, Department of Cell Biology, Embryology and Genetics, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | - D T Pereira
- Plant Cell Biology Laboratory, Department of Cell Biology, Embryology and Genetics, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | - L C Ouriques
- Central Laboratory of Electron Microscopy, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | - Z L Bouzon
- Central Laboratory of Electron Microscopy, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | - C Simioni
- Postdoctoral Research of Postgraduate Program in Cell Biology and Development, Department of Cell Biology, Embryology and Genetics, Federal University of Santa Catarina, Florianópolis, SC, Brazil
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41
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Ivanov S, Harrison MJ. Accumulation of phosphoinositides in distinct regions of the periarbuscular membrane. THE NEW PHYTOLOGIST 2019; 221:2213-2227. [PMID: 30347433 DOI: 10.1111/nph.15553] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2018] [Accepted: 10/15/2018] [Indexed: 05/11/2023]
Abstract
Phosphoinositides and phosphatidic acid are small anionic lipids that comprise a minor proportion of total membrane lipids in eukaryotic cells but influence a broad range of cellular processes including endomembrane trafficking, signaling, exocytosis and endocytosis. To investigate the spatial distribution of phosphoinositides during arbuscular mycorrhizal symbiosis, we generated fluorescent reporters of PI(4,5)P2 and PI4P, as well as phosphatidic acid and diacylglycerol and used them to monitor lipid distribution on the cytoplasmic side of membrane bilayers in colonized cortical cells. The PI4P reporter accumulated strongly on the periarbuscular membrane (PAM) and transiently labeled Golgi bodies, while the PA reporter showed differential labeling of endomembranes and the PAM. Surprisingly, the PI(4,5)P2 reporter accumulated in small, discrete regions of the PAM on the arbuscule trunks, frequently in two regions on opposing sides of the hypha. A mutant reporter with reduced PI(4,5)P2 binding capacity did not show these accumulations. The PI(4,5)P2 -rich regions were detected at all phases of arbuscule development following branching, co-localized with membrane marker proteins potentially indicating high membrane bilayer content, and were associated with an alteration in morphology of the hypha. A possible analogy to the biotrophic interfacial membrane complex formed in rice infected with Magnaporthe orzyae is discussed.
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Affiliation(s)
- Sergey Ivanov
- Boyce Thompson Institute, 533 Tower Road, Ithaca, NY, 14853, USA
| | - Maria J Harrison
- Boyce Thompson Institute, 533 Tower Road, Ithaca, NY, 14853, USA
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42
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van Wijk R, Zhang Q, Zarza X, Lamers M, Marquez FR, Guardia A, Scuffi D, García-Mata C, Ligterink W, Haring MA, Laxalt AM, Munnik T. Role for Arabidopsis PLC7 in Stomatal Movement, Seed Mucilage Attachment, and Leaf Serration. FRONTIERS IN PLANT SCIENCE 2018; 9:1721. [PMID: 30542361 PMCID: PMC6278229 DOI: 10.3389/fpls.2018.01721] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2018] [Accepted: 11/05/2018] [Indexed: 05/24/2023]
Abstract
Phospholipase C (PLC) has been suggested to play important roles in plant stress and development. To increase our understanding of PLC signaling in plants, we have started to analyze knock-out (KO), knock-down (KD) and overexpression mutants of Arabidopsis thaliana, which contains nine PLCs. Earlier, we characterized PLC2, PLC3 and PLC5. Here, the role of PLC7 is functionally addressed. Promoter-GUS analyses revealed that PLC7 is specifically expressed in the phloem of roots, leaves and flowers, and is also present in trichomes and hydathodes. Two T-DNA insertion mutants were obtained, i.e., plc7-3 being a KO- and plc7-4 a KD line. In contrast to earlier characterized phloem-expressed PLC mutants, i.e., plc3 and plc5, no defects in primary- or lateral root development were found for plc7 mutants. Like plc3 mutants, they were less sensitive to ABA during stomatal closure. Double-knockout plc3 plc7 lines were lethal, but plc5 plc7 (plc5/7) double mutants were viable, and revealed several new phenotypes, not observed earlier in the single mutants. These include a defect in seed mucilage, enhanced leaf serration, and an increased tolerance to drought. Overexpression of PLC7 enhanced drought tolerance too, similar to what was earlier found for PLC3-and PLC5 overexpression. In vivo 32Pi-labeling of seedlings and treatment with sorbitol to mimic drought stress, revealed stronger PIP2 responses in both drought-tolerant plc5/7 and PLC7-OE mutants. Together, these results show novel functions for PLC in plant stress and development. Potential molecular mechanisms are discussed.
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Affiliation(s)
- Ringo van Wijk
- Section Plant Physiology, University of Amsterdam, Amsterdam, Netherlands
- Section Plant Cell Biology, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, Netherlands
| | - Qianqian Zhang
- Section Plant Physiology, University of Amsterdam, Amsterdam, Netherlands
- Section Plant Cell Biology, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, Netherlands
| | - Xavier Zarza
- Section Plant Physiology, University of Amsterdam, Amsterdam, Netherlands
- Section Plant Cell Biology, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, Netherlands
| | - Mart Lamers
- Section Plant Physiology, University of Amsterdam, Amsterdam, Netherlands
| | | | - Aisha Guardia
- Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
| | - Denise Scuffi
- Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
| | - Carlos García-Mata
- Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
| | - Wilco Ligterink
- Laboratory of Plant Physiology, Wageningen University and Research, Wageningen, Netherlands
| | - Michel A. Haring
- Section Plant Physiology, University of Amsterdam, Amsterdam, Netherlands
| | - Ana M. Laxalt
- Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
| | - Teun Munnik
- Section Plant Physiology, University of Amsterdam, Amsterdam, Netherlands
- Section Plant Cell Biology, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, Netherlands
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43
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Zhang Q, van Wijk R, Zarza X, Shahbaz M, van Hooren M, Guardia A, Scuffi D, García-Mata C, Van den Ende W, Hoffmann-Benning S, Haring MA, Laxalt AM, Munnik T. Knock-Down of Arabidopsis PLC5 Reduces Primary Root Growth and Secondary Root Formation While Overexpression Improves Drought Tolerance and Causes Stunted Root Hair Growth. PLANT & CELL PHYSIOLOGY 2018; 59:2004-2019. [PMID: 30107538 DOI: 10.1093/pcp/pcy120] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2018] [Accepted: 06/14/2018] [Indexed: 05/12/2023]
Abstract
Phospholipase C (PLC) is a well-known signaling enzyme in metazoans that hydrolyzes phosphatidylinositol 4,5-bisphosphate (PIP2) to produce inositol 1,4,5-trisphosphate and diacylglycerol as second messengers involved in mutiple processes. Plants contain PLC too, but relatively little is known about its function there. The model system Arabidopsis thaliana contains nine PLC genes. Reversed genetics have implicated several roles for PLCs in plant development and stress signaling. Here, PLC5 is functionally addressed. Promoter-β-glucuronidase (GUS) analyses revealed expression in roots, leaves and flowers, predominantly in vascular tissue, most probably phloem companion cells, but also in guard cells, trichomes and root apical meristem. Only one plc5-1 knock-down mutant was obtained, which developed normally but grew more slowly and exhibited reduced primary root growth and decreased lateral root numbers. These phenotypes could be complemented by expressing the wild-type gene behind its own promoter. Overexpression of PLC5 (PLC5-OE) using the UBQ10 promoter resulted in reduced primary and secondary root growth, stunted root hairs, decreased stomatal aperture and improved drought tolerance. PLC5-OE lines exhibited strongly reduced phosphatidylinositol 4-monophosphate (PIP) and PIP2 levels and increased amounts of phosphatidic acid, indicating enhanced PLC activity in vivo. Reduced PIP2 levels and stunted root hair growth of PLC5-OE seedlings could be recovered by inducible overexpression of a root hair-specific PIP 5-kinase, PIP5K3. Our results show that PLC5 is involved in primary and secondary root growth and that its overexpression improves drought tolerance. Independently, we provide new evidence that PIP2 is essential for the polar tip growth of root hairs.
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Affiliation(s)
- Qianqian Zhang
- Section Plant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, XH, The Netherlands
- Section Plant Cell Biology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, XH, The Netherlands
| | - Ringo van Wijk
- Section Plant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, XH, The Netherlands
- Section Plant Cell Biology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, XH, The Netherlands
| | - Xavier Zarza
- Section Plant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, XH, The Netherlands
- Section Plant Cell Biology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, XH, The Netherlands
| | - Muhammad Shahbaz
- Section Plant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, XH, The Netherlands
| | - Max van Hooren
- Section Plant Cell Biology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, XH, The Netherlands
| | - Aisha Guardia
- Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
| | - Denise Scuffi
- Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
| | - Carlos García-Mata
- Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
| | - Wim Van den Ende
- Laboratory of Molecular Plant Biology, University of Leuven, Leuven, Belgium
| | - Susanne Hoffmann-Benning
- Department of Biochemistry & Molecular Biology, Michigan State University, East Lansing, MI, USA
| | - Michel A Haring
- Section Plant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, XH, The Netherlands
| | - Ana M Laxalt
- Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
| | - Teun Munnik
- Section Plant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, XH, The Netherlands
- Section Plant Cell Biology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, XH, The Netherlands
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44
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Diao M, Qu X, Huang S. Calcium imaging in Arabidopsis pollen cells using G-CaMP5. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2018; 60:897-906. [PMID: 29424471 DOI: 10.1111/jipb.12642] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2018] [Accepted: 02/07/2018] [Indexed: 05/18/2023]
Abstract
Calcium (Ca2+ ) signaling has been implicated in pollen germination and pollen tube growth. To date, however, we still know very little about how exactly Ca2+ signaling links to various physiological subcellular processes during pollen germination and pollen tube growth. Given that Ca2+ signaling is tightly related to the cytosolic concentration and dynamics of Ca2+ , it is vital to trace the dynamic changes in Ca2+ levels in order to decode Ca2+ signaling. Here, we demonstrate that G-CaMP5 serves well as an indicator for monitoring cytosolic Ca2+ dynamics in pollen cells. Using this probe, we show that cytosolic Ca2+ changes dramatically during pollen germination, and, as reported previously, Ca2+ forms a tip-focused gradient in the pollen tube and undergoes oscillation in the tip region during pollen tube growth. In particular, using G-CaMP5 allowed us to capture the dynamic changes in the cytosolic Ca2+ concentration ([Ca2+ ]cyt ) in pollen tubes in response to various exogenous treatments. Our data suggest that G-CaMP5 is a suitable probe for monitoring the dynamics of [Ca2+ ]cyt in pollen cells.
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Affiliation(s)
- Min Diao
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- Center for Plant Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiaolu Qu
- Center for Plant Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China
| | - Shanjin Huang
- Center for Plant Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China
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45
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Li H, Luo N, Wang W, Liu Z, Chen J, Zhao L, Tan L, Wang C, Qin Y, Li C, Xu T, Yang Z. The REN4 rheostat dynamically coordinates the apical and lateral domains of Arabidopsis pollen tubes. Nat Commun 2018; 9:2573. [PMID: 29968705 PMCID: PMC6030205 DOI: 10.1038/s41467-018-04838-w] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2017] [Accepted: 05/11/2018] [Indexed: 11/08/2022] Open
Abstract
The dynamic maintenance of polar domains in the plasma membrane (PM) is critical for many fundamental processes, e.g., polar cell growth and growth guidance but remains poorly characterized. Rapid tip growth of Arabidopsis pollen tubes requires dynamic distribution of active ROP1 GTPase to the apical domain. Here, we show that clathrin-mediated endocytosis (CME) coordinates lateral REN4 with apical ROP1 signaling. REN4 interacted with but antagonized active ROP1. REN4 also interacts and co-localizes with CME components, but exhibits an opposite role to CME, which removes both REN4 and active ROP1 from the PM. Mathematical modeling shows that REN4 restrains the spatial distribution of active ROP1 and is important for the robustness of polarity control. Hence our results indicate that REN4 acts as a spatiotemporal rheostat by interacting with ROP1 to initiate their removal from the PM by CME, thereby coordinating a dynamic demarcation between apical and lateral domains during rapid tip growth.
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Affiliation(s)
- Hui Li
- Shanghai Center for Plant Stress Biology and Shanghai Institute of Plant Physiology and Ecolog, Shanghai Institutes for Biological Sciences Chinese Academy of Sciences, 201602, Shanghai, China
- Center for Plant Cell Biology, Institute of Integrative Genome Biology, and Department of Botany and Plant Sciences, University of California, Riverside, CA, 92508, USA
- School of Life Sciences, East China Normal University, 200241, Shanghai, China
| | - Nan Luo
- Center for Plant Cell Biology, Institute of Integrative Genome Biology, and Department of Botany and Plant Sciences, University of California, Riverside, CA, 92508, USA
- FAFU-UCR Joint Center for Horticultural Biology and Metebolomics, Institute of Science and Technology, Fujian Agriculture and Forestry University, 350002, Fuzhou, China
| | - Weidong Wang
- Center for Plant Cell Biology, Institute of Integrative Genome Biology, and Department of Botany and Plant Sciences, University of California, Riverside, CA, 92508, USA
| | - Zengyu Liu
- FAFU-UCR Joint Center for Horticultural Biology and Metebolomics, Institute of Science and Technology, Fujian Agriculture and Forestry University, 350002, Fuzhou, China
| | - Jisheng Chen
- Center for Plant Cell Biology, Institute of Integrative Genome Biology, and Department of Botany and Plant Sciences, University of California, Riverside, CA, 92508, USA
- FAFU-UCR Joint Center for Horticultural Biology and Metebolomics, Institute of Science and Technology, Fujian Agriculture and Forestry University, 350002, Fuzhou, China
| | - Liangtao Zhao
- Shanghai Center for Plant Stress Biology and Shanghai Institute of Plant Physiology and Ecolog, Shanghai Institutes for Biological Sciences Chinese Academy of Sciences, 201602, Shanghai, China
| | - Li Tan
- Shanghai Center for Plant Stress Biology and Shanghai Institute of Plant Physiology and Ecolog, Shanghai Institutes for Biological Sciences Chinese Academy of Sciences, 201602, Shanghai, China
| | - Chunyan Wang
- Shanghai Center for Plant Stress Biology and Shanghai Institute of Plant Physiology and Ecolog, Shanghai Institutes for Biological Sciences Chinese Academy of Sciences, 201602, Shanghai, China
| | - Yuan Qin
- FAFU-UCR Joint Center for Horticultural Biology and Metebolomics, Institute of Science and Technology, Fujian Agriculture and Forestry University, 350002, Fuzhou, China
| | - Chao Li
- School of Life Sciences, East China Normal University, 200241, Shanghai, China
| | - Tongda Xu
- Shanghai Center for Plant Stress Biology and Shanghai Institute of Plant Physiology and Ecolog, Shanghai Institutes for Biological Sciences Chinese Academy of Sciences, 201602, Shanghai, China
- FAFU-UCR Joint Center for Horticultural Biology and Metebolomics, Institute of Science and Technology, Fujian Agriculture and Forestry University, 350002, Fuzhou, China
| | - Zhenbiao Yang
- Center for Plant Cell Biology, Institute of Integrative Genome Biology, and Department of Botany and Plant Sciences, University of California, Riverside, CA, 92508, USA.
- FAFU-UCR Joint Center for Horticultural Biology and Metebolomics, Institute of Science and Technology, Fujian Agriculture and Forestry University, 350002, Fuzhou, China.
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46
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Hong Y, Yuan S, Sun L, Wang X, Hong Y. Cytidinediphosphate-diacylglycerol synthase 5 is required for phospholipid homeostasis and is negatively involved in hyperosmotic stress tolerance. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2018; 94:1038-1050. [PMID: 29604140 DOI: 10.1111/tpj.13916] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2017] [Revised: 03/12/2018] [Accepted: 03/22/2018] [Indexed: 06/08/2023]
Abstract
Cytidinediphosphate diacylglycerol synthase (CDS) uses phosphatidic acid (PA) and cytidinetriphosphate to produce cytidinediphosphate-diacylglycerol, an intermediate for phosphatidylglycerol (PG) and phosphatidylinositol (PI) synthesis. This study shows that CDS5, one of the five CDSs of the Oryza sativa (rice) genome, has multifaceted effects on plant growth and stress responses. The loss of CDS5 resulted in a decrease in PG and PI levels, defective thylakoid membranes, pale leaves in seedlings and growth retardation. In addition, the loss of CDS5 led to an elevated PA level and enhanced hyperosmotic tolerance. The inhibition of phospholipase D (PLD)-derived PA formation in cds5 restored the hyperosmotic stress tolerance of the mutant phenotype to that of the wild type, suggesting that CDS5 functions as a suppressor in PLD-derived PA signaling and negatively affects hyperosmotic stress tolerance.
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Affiliation(s)
- Yue Hong
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
| | - Shu Yuan
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
| | - Linxiao Sun
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
| | - Xuemin Wang
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
- Department of Biology, University of Missouri, St. Louis, MO, 63121, USA
- Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA
| | - Yueyun Hong
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
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47
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Chen J, Wang P, de Graaf BHJ, Zhang H, Jiao H, Tang C, Zhang S, Wu J. Phosphatidic Acid Counteracts S-RNase Signaling in Pollen by Stabilizing the Actin Cytoskeleton. THE PLANT CELL 2018; 30:1023-1039. [PMID: 29716992 PMCID: PMC6002197 DOI: 10.1105/tpc.18.00021] [Citation(s) in RCA: 61] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2018] [Revised: 04/09/2018] [Accepted: 04/27/2018] [Indexed: 05/18/2023]
Abstract
S-RNase is the female determinant of self-incompatibility (SI) in pear (Pyrus bretschneideri). After translocation to the pollen tube, S-RNase degrades rRNA and induces pollen tube death in an S-haplotype-specific manner. In this study, we found that the actin cytoskeleton is a target of P. bretschneideri S-RNase (PbrS-RNase) and uncovered a mechanism that involves phosphatidic acid (PA) and protects the pollen tube from PbrS-RNase cytotoxicity. PbrS-RNase interacts directly with PbrActin1 in an S-haplotype-independent manner, causing the actin cytoskeleton to depolymerize and promoting programmed cell death in the self-incompatible pollen tube. Pro-156 of PbrS-RNase is essential for the PbrS-RNase-PbrActin1 interaction, and the actin cytoskeleton-depolymerizing function of PbrS-RNase does not require its RNase activity. PbrS-RNase cytotoxicity enhances the expression of phospholipase D (PbrPLDδ1), resulting in increased PA levels in the incompatible pollen tube. PbrPLDδ1-derived PA initially prevents depolymerization of the actin cytoskeleton elicited by PbrS-RNase and delays the SI signaling that leads to pollen tube death. This work provides insights into the orchestration of the S-RNase-based SI response, in which increased PA levels initially play a protective role in incompatible pollen, until sustained PbrS-RNase activity reaches the point of no return and pollen tube growth ceases.
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Affiliation(s)
- Jianqing Chen
- Center of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
- College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Peng Wang
- Center of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
| | - Barend H J de Graaf
- School of Biosciences, Cardiff University, Museum Avenue, Cardiff CF10 3AX, United Kingdom
| | - Hao Zhang
- Center of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
| | - Huijun Jiao
- Center of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
| | - Chao Tang
- Center of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
| | - Shaoling Zhang
- Center of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
| | - Juyou Wu
- Center of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
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48
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Han B, Yang N, Pu H, Wang T. Quantitative Proteomics and Cytology of Rice Pollen Sterol-Rich Membrane Domains Reveals Pre-established Cell Polarity Cues in Mature Pollen. J Proteome Res 2018; 17:1532-1546. [PMID: 29508613 DOI: 10.1021/acs.jproteome.7b00852] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Bing Han
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ning Yang
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Hai Pu
- Bruker Daltonics Inc. (China), Beijing 100081, China
| | - Tai Wang
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- University of Chinese Academy of Sciences, Beijing 100049, China
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49
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Zhang Q, van Wijk R, Shahbaz M, Roels W, Schooten BV, Vermeer JEM, Zarza X, Guardia A, Scuffi D, García-Mata C, Laha D, Williams P, Willems LAJ, Ligterink W, Hoffmann-Benning S, Gillaspy G, Schaaf G, Haring MA, Laxalt AM, Munnik T. Arabidopsis Phospholipase C3 is Involved in Lateral Root Initiation and ABA Responses in Seed Germination and Stomatal Closure. PLANT & CELL PHYSIOLOGY 2018; 59:469-486. [PMID: 29309666 DOI: 10.1093/pcp/pcx194] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2017] [Accepted: 12/01/2017] [Indexed: 05/10/2023]
Abstract
Phospholipase C (PLC) is well known for its role in animal signaling, where it generates the second messengers, inositol 1,4,5-trisphosphate (IP3) and diacylglycerol (DAG), by hydrolyzing the minor phospholipid, phosphatidylinositol 4,5-bisphosphate (PIP2), upon receptor stimulation. In plants, PLC's role is still unclear, especially because the primary targets of both second messengers are lacking, i.e. the ligand-gated Ca2+ channel and protein kinase C, and because PIP2 levels are extremely low. Nonetheless, the Arabidopsis genome encodes nine PLCs. We used a reversed-genetic approach to explore PLC's function in Arabidopsis, and report here that PLC3 is required for proper root development, seed germination and stomatal opening. Two independent knock-down mutants, plc3-2 and plc3-3, were found to exhibit reduced lateral root densities by 10-20%. Mutant seeds germinated more slowly but were less sensitive to ABA to prevent germination. Guard cells of plc3 were also compromised in ABA-dependent stomatal closure. Promoter-β-glucuronidase (GUS) analyses confirmed PLC3 expression in guard cells and germinating seeds, and revealed that the majority is expressed in vascular tissue, most probably phloem companion cells, in roots, leaves and flowers. In vivo 32Pi labeling revealed that ABA stimulated the formation of PIP2 in germinating seeds and guard cell-enriched leaf peels, which was significantly reduced in plc3 mutants. Overexpression of PLC3 had no effect on root system architecture or seed germination, but increased the plant's tolerance to drought. Our results provide genetic evidence for PLC's involvement in plant development and ABA signaling, and confirm earlier observations that overexpression increases drought tolerance. Potential molecular mechanisms for the above observations are discussed.
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Affiliation(s)
- Qianqian Zhang
- Swammerdam Institute for Life Sciences, section Plant Physiology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
- Swammerdam Institute for Life Sciences, section Plant Cell Biology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
| | - Ringo van Wijk
- Swammerdam Institute for Life Sciences, section Plant Physiology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
- Swammerdam Institute for Life Sciences, section Plant Cell Biology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
| | - Muhammad Shahbaz
- Swammerdam Institute for Life Sciences, section Plant Physiology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
| | - Wendy Roels
- Swammerdam Institute for Life Sciences, section Plant Physiology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
| | - Bas van Schooten
- Swammerdam Institute for Life Sciences, section Plant Physiology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
| | - Joop E M Vermeer
- Swammerdam Institute for Life Sciences, section Plant Physiology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
- Department of Plant and Microbial Biology, University of Zürich, Zürich, Switzerland
| | - Xavier Zarza
- Swammerdam Institute for Life Sciences, section Plant Physiology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
- Swammerdam Institute for Life Sciences, section Plant Cell Biology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
| | - Aisha Guardia
- Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
| | - Denise Scuffi
- Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
| | - Carlos García-Mata
- Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
| | - Debabrata Laha
- Center for Plant Molecular Biology, University of Tübingen, Tübingen, Germany
- Institute of Crop Science and Resource Conservation, Department of Plant Nutrition, University of Bonn, Bonn, Germany
| | - Phoebe Williams
- Department of Biochemistry, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA
| | - Leo A J Willems
- Laboratory of Plant Physiology, Wageningen University & Research, Droevendaalsesteeg 1, 6708 PB, Wageningen, The Netherlands
| | - Wilco Ligterink
- Laboratory of Plant Physiology, Wageningen University & Research, Droevendaalsesteeg 1, 6708 PB, Wageningen, The Netherlands
| | - Susanne Hoffmann-Benning
- Departement of Biochemistry & Molecular Biology, Michigan State University, East Lansing, MI, USA
| | - Glenda Gillaspy
- Department of Biochemistry, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA
| | - Gabriel Schaaf
- Center for Plant Molecular Biology, University of Tübingen, Tübingen, Germany
- Institute of Crop Science and Resource Conservation, Department of Plant Nutrition, University of Bonn, Bonn, Germany
| | - Michel A Haring
- Swammerdam Institute for Life Sciences, section Plant Physiology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
| | - Ana M Laxalt
- Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
| | - Teun Munnik
- Swammerdam Institute for Life Sciences, section Plant Physiology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
- Swammerdam Institute for Life Sciences, section Plant Cell Biology, University of Amsterdam, Science Park 904, Amsterdam, 1098 XH, The Netherlands
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50
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Goring DR. Exocyst, exosomes, and autophagy in the regulation of Brassicaceae pollen-stigma interactions. JOURNAL OF EXPERIMENTAL BOTANY 2017; 69:69-78. [PMID: 29036428 DOI: 10.1093/jxb/erx340] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
Brassicaceae pollen-stigma interactions have been extensively studied in Brassica and Arabidopsis species to identify cellular events triggered in the stigmatic papillae by pollen contact. Compatible pollinations are linked to the activation of basal cellular responses in the stigmatic papillae, which include calcium gradients, actin networks, and polarized secretion. The occurrence of these cellular events in stigmatic papillae coincides with the stages of pollen hydration and pollen tube entry into the stigmatic papillar cell wall. However, the form of the vesicle trafficking appears to differ between species, with vesicle-like structures detected in Arabidopsis species while exosomes were found to be secreted in Brassica species. Around the same timeframe, self-incompatible pollen recognition leads altered cellular responses in the stigmatic papillae to interfere with basal compatible pollen responses and disrupt regulated secretion, causing self-pollen rejection. Here, the literature on the changing cellular dynamics in the stigmatic papillae following pollination is reviewed and discussed in the context of other well-characterized examples of polarized secretion in plants.
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Affiliation(s)
- Daphne R Goring
- Department of Cell & Systems Biology, University of Toronto, Canada M5S 3B2
- Centre for the Analysis of Genome Evolution and Function, University of Toronto, Canada M5S 3B2
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