1
|
Pinela E, Schnürer A, Neubeck A, Moestedt J, Westerholm M. Impact of additives on syntrophic propionate and acetate enrichments under high-ammonia conditions. Appl Microbiol Biotechnol 2024; 108:433. [PMID: 39110235 PMCID: PMC11306274 DOI: 10.1007/s00253-024-13263-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2024] [Revised: 07/17/2024] [Accepted: 07/20/2024] [Indexed: 08/10/2024]
Abstract
High ammonia concentrations in anaerobic degradation systems cause volatile fatty acid accumulation and reduced methane yield, which often derive from restricted activity of syntrophic acid-oxidising bacteria and hydrogenotrophic methanogens. Inclusion of additives that facilitate the electron transfer or increase cell proximity of syntrophic species by flocculation can be a suitable strategy to counteract these problems, but its actual impact on syntrophic interactions has yet to be determined. In this study, microbial cultivation and molecular and microscopic analysis were performed to evaluate the impact of conductive (graphene, iron oxide) and non-conductive (zeolite) additives on the degradation rate of acetate and propionate to methane by highly enriched ammonia-tolerant syntrophic cultures derived from a biogas process. All additives had a low impact on the lag phase but resulted in a higher rate of acetate (except graphene) and propionate degradation. The syntrophic bacteria 'Candidatus Syntrophopropionicum ammoniitolerans', Syntrophaceticus schinkii and a novel hydrogenotrophic methanogen were found in higher relative abundance and higher gene copy numbers in flocculating communities than in planktonic communities in the cultures, indicating benefits to syntrophs of living in close proximity to their cooperating partner. Microscopy and element analysis showed precipitation of phosphates and biofilm formation in all batches except on the graphene batches, possibly enhancing the rate of acetate and propionate degradation. Overall, the concordance of responses observed in both acetate- and propionate-fed cultures highlight the suitability of the addition of iron oxide or zeolites to enhance acid conversion to methane in high-ammonia biogas processes. KEY POINTS: • All additives promoted acetate (except graphene) and propionate degradation. • A preference for floc formation by ammonia-tolerant syntrophs was revealed. • Microbes colonised the surfaces of iron oxide and zeolite, but not graphene.
Collapse
Affiliation(s)
- Eduardo Pinela
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, 750 07, Uppsala, Sweden
| | - Anna Schnürer
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, 750 07, Uppsala, Sweden
| | - Anna Neubeck
- Department of Earth Sciences, Uppsala University, 752 36, Uppsala, Sweden
| | - Jan Moestedt
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, 750 07, Uppsala, Sweden
- Department of Biogas R & D, Tekniska Verken I Linköping AB (Publ.), Box 1500, 581 15, Linköping, Sweden
- Department of Thematic Studies - Environmental Change, Linköping University, 581 83, Linköping, Sweden
| | - Maria Westerholm
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, 750 07, Uppsala, Sweden.
| |
Collapse
|
2
|
Zhou K, Zhang H, Guo D, Gao S, Pei Y, Hou L. Amorphous Fe substrate enhances nitrogen and phosphorus removal in sulfur autotrophic process. WATER RESEARCH 2024; 256:121581. [PMID: 38614032 DOI: 10.1016/j.watres.2024.121581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Revised: 04/02/2024] [Accepted: 04/05/2024] [Indexed: 04/15/2024]
Abstract
The autotrophic denitrification of coupled sulfur and natural iron ore can remove nitrogen and phosphorus from wastewater with low C/N ratios. However, the low solubility of crystalline Fe limits its bioavailability and P absorption capacity. This study investigated the effects of amorphous Fe in drinking water treatment residue (DWTR) and crystalline Fe in red mud (RM) on nitrogen and phosphorus removal during sulfur autotrophic processes. Two types of S-Fe cross-linked filler particles with three-dimensional mesh structures were obtained by combining sulfur with the DWTR/RM using the hydrogel encapsulation method. Two fixed-bed reactors, sulfur-DWTR autotrophic denitrification (SDAD) and sulfur-RM autotrophic denitrification (SRAD), were constructed and stably operated for 236 d Under a 5-8-h hydraulic retention time, the average NO3--N, TN, and phosphate removal rates of SDAD and SRAD were 99.04 %, 96.29 %, 94.03 % (SDAD) and 97.33 %, 69.97 %, 82.26 % (SRAD), respectively. It is important to note that fermentative iron-reducing bacteria, specifically Clostridium_sensu_stricto_1, were present in SDAD at an abundance of 58.17 %, but were absent from SRAD. The presence of these bacteria facilitated the reduction of Fe (III) to Fe (II), which led to the complete denitrification of the S-Fe (II) co-electron donor to produce Fe (III), completing the iron cycle in the system. This study proposes an enhancement method for sulfur autotrophic denitrification using an amorphous Fe substrate, providing a new option for the efficient treatment of low-C/N wastewater.
Collapse
Affiliation(s)
- Kebing Zhou
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, Beijing 100875, China; The Key Laboratory of Water and Sediment Sciences, Ministry of Education, School of Environment, Beijing Normal University, Beijing 100875, China
| | - Hao Zhang
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, Beijing 100875, China; The Key Laboratory of Water and Sediment Sciences, Ministry of Education, School of Environment, Beijing Normal University, Beijing 100875, China
| | - Dong Guo
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, Beijing 100875, China; The Key Laboratory of Water and Sediment Sciences, Ministry of Education, School of Environment, Beijing Normal University, Beijing 100875, China
| | - Shuocheng Gao
- Beijing Engineering Research Center of Sustainable Urban Sewage System Construction and Risk Control, Beijing University of Civil Engineering and Architecture, Beijing 100044, China
| | - Yuansheng Pei
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, Beijing 100875, China; The Key Laboratory of Water and Sediment Sciences, Ministry of Education, School of Environment, Beijing Normal University, Beijing 100875, China.
| | - Li'an Hou
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, Beijing 100875, China; The Key Laboratory of Water and Sediment Sciences, Ministry of Education, School of Environment, Beijing Normal University, Beijing 100875, China.
| |
Collapse
|
3
|
Chen X, Yang G, Quan X, Zhu S, Qin B, Shou D, Zhuang L. Significance of a minor pilin PilV in biofilm cohesion of Geobacter sulfurreducens. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 927:172242. [PMID: 38582122 DOI: 10.1016/j.scitotenv.2024.172242] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Revised: 04/03/2024] [Accepted: 04/03/2024] [Indexed: 04/08/2024]
Abstract
Bacterial adhesion plays a vital role in forming and shaping the structure of electroactive biofilms that are essential for the performance of bioelectrochemical systems (BESs). Type IV pili are known to mediate cell adhesion in many Gram-negative bacteria, but the mechanism of pili-mediated cell adhesion of Geobacter species on anode surface remains unclear. Herein, a minor pilin PilV2 was found to be essential for cell adhesion ability of Geobacter sulfurreducens since the lack of pilV2 gene depressed the cell adhesion capability by 81.2% in microplate and the anodic biofilm density by 23.1 % at -0.1 V and 37.7 % at -0.3 V in BESs. The less cohesiveness of mutant biofilms increased the charge transfer resistance and biofilm resistance, which correspondingly lowered current generation of the pilV2-deficient strain by up to 63.2 % compared with that of the wild-type strain in BESs. The deletion of pilV2 posed an insignificant effect on the production of extracellular polysaccharides, pili, extracellular cytochromes and electron shuttles that are involved in biofilm formation or extracellular electron transfer (EET) process. This study demonstrated the significance of pilV2 gene in cell adhesion and biofilm formation of G. sulfurreducens, as well as the importance of pili-mediated adhesion for EET of electroactive biofilm.
Collapse
Affiliation(s)
- Xiaochun Chen
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China
| | - Guiqin Yang
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China
| | - Xiaoyun Quan
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China
| | - Siyue Zhu
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China
| | - Baoli Qin
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China
| | - Danyang Shou
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China
| | - Li Zhuang
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China.
| |
Collapse
|
4
|
Eshun LE, Coker VS, Shaw S, Lloyd JR. Strategies for optimizing biovivianite production using dissimilatory Fe(III)-reducing bacteria. ENVIRONMENTAL RESEARCH 2024; 242:117667. [PMID: 37980994 DOI: 10.1016/j.envres.2023.117667] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2023] [Revised: 11/06/2023] [Accepted: 11/13/2023] [Indexed: 11/21/2023]
Abstract
Vivianite (Fe3(PO4)2·8H2O), a sink for phosphorus, is a key mineralization product formed during the microbial reduction of phosphate-containing Fe(III) minerals in natural systems, and also in wastewater treatment where Fe(III)-minerals are used to remove phosphate. As biovivianite is a potentially useful Fe and P fertiliser, there is much interest in harnessing microbial biovivianite synthesis for circular economy applications. In this study, we investigated the factors that influence the formation of microbially-synthesized vivianite (biovivianite) under laboratory batch systems including the presence and absence of phosphate and electron shuttle, the buffer system, pH, and the type of Fe(III)-reducing bacteria (comparing Geobacter sulfurreducens and Shewanella putrefaciens). The rate of Fe(II) production, and its interactions with the residual Fe(III) and other oxyanions (e.g., phosphate and carbonate) were the main factors that controlled the rate and extent of biovivianite formation. Higher concentrations of phosphate (e.g., P/Fe = 1) in the presence of an electron shuttle, at an initial pH between 6 and 7, were needed for optimal biovivianite formation. Green rust, a key intermediate in biovivianite production, could be detected as an endpoint alongside vivianite and metavivianite (Fe2+Fe3+2(PO4)2.(OH)2.6H2O), in treatments with G. sulfurreducens and S. putrefaciens. However, XRD indicated that vivianite abundance was higher in experiments containing G. sulfurreducens, where it dominated. This study, therefore, shows that vivianite formation can be controlled to optimize yield during microbial processing of phosphate-loaded Fe(III) materials generated from water treatment processes.
Collapse
Affiliation(s)
- Lordina E Eshun
- University of Manchester, Department of Earth and Environmental Sciences, Geomicrobiology Group, Williamson Building, M13 9QQ, Oxford Road, Manchester, UK.
| | - Victoria S Coker
- University of Manchester, Department of Earth and Environmental Sciences, Geomicrobiology Group, Williamson Building, M13 9QQ, Oxford Road, Manchester, UK.
| | - Samuel Shaw
- University of Manchester, Department of Earth and Environmental Sciences, Geomicrobiology Group, Williamson Building, M13 9QQ, Oxford Road, Manchester, UK.
| | - Jonathan R Lloyd
- University of Manchester, Department of Earth and Environmental Sciences, Geomicrobiology Group, Williamson Building, M13 9QQ, Oxford Road, Manchester, UK.
| |
Collapse
|
5
|
Zhang Q, Ma T, Chen H, He L, Wen Q, Zhu Q, Huang D, Xu C, Zhu H. Key process for reducing grains arsenic by applying sulfate varies with irrigation mode: Dual effects of microbe-mediated arsenic transformation and iron plaque. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 337:122569. [PMID: 37722477 DOI: 10.1016/j.envpol.2023.122569] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Revised: 08/22/2023] [Accepted: 09/14/2023] [Indexed: 09/20/2023]
Abstract
Sulfate affects the transformation of arsenic (As) in soil and its absorption by plant roots. However, the influence of sulfate and irrigation interactions on the mobility of As in the soil-rice system remains poorly understood. To address this gap, we conducted a pot experiment with varying sulfate levels and irrigation modes to examine their effects on rice As translocation, soil As forms, iron plaque formation, and microorganisms involved in As transformation. The addition of exogenous sulfate significantly reduced grain As levels by a maximum of 60.1%, 46.7%, and 70.5% under flooding (F), flooding-moist alternate (FM), moist (M) conditions, respectively. However, the changes in soil available As did not fully correspond to grains As content. Soil available As was only reduced by sulfate under the FM treatment, which limited grains As accumulation under this condition. The reduction in grains As content under F and M conditions was mainly attributed to sulfate-induced increases in soil pH, which in turn inhibited As translocation and promoted iron plaque formation. Additionally, both irrigation mode and sulfate fertilization independently or interactively influenced the abundance of Sulfuritalea, Koribacter, Geobacter, and Sulfuriferula, thereby affecting the As forms in soil through the Fe/S redox process. Specifically, under F and FM conditions, SO42--S inhibited Geobacter but stimulated Fe-oxidizing bacteria, possibly resulting in increased As bound to Fe/Mn oxides (As-F3). Under M condition, SO42--S levels regulated As adsorption and release through the participation of Fe/S cycle bacteria, specifically influencing the adsorbed As fraction (As-F2). Therefore, the addition of SO42--S hindered As translocation to grains by promoting As sequestration in the iron plaque and facilitating microbe-mediated As immobilization through the Fe/S cycle, which was dependent on soil moisture. These results can be used as a guide for sulfur fertilizer application under different soil moisture with the goal of minimizing rice grain As.
Collapse
Affiliation(s)
- Quan Zhang
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, 410125, China
| | - Tianchi Ma
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, 410125, China
| | - Haifei Chen
- College of Resources and Environment, Hunan Agricultural University, Changsha, China
| | - Lei He
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, 410125, China
| | - Qiren Wen
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, 410125, China; College of Resources and Environment, Hunan Agricultural University, Changsha, China
| | - Qihong Zhu
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, 410125, China
| | - Daoyou Huang
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, 410125, China
| | - Chao Xu
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, 410125, China
| | - Hanhua Zhu
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, 410125, China.
| |
Collapse
|
6
|
Abstract
Extracellular electron transfer (EET) is the physiological process that enables the reduction or oxidation of molecules and minerals beyond the surface of a microbial cell. The first bacteria characterized with this capability were Shewanella and Geobacter, both reported to couple their growth to the reduction of iron or manganese oxide minerals located extracellularly. A key difference between EET and nearly every other respiratory activity on Earth is the need to transfer electrons beyond the cell membrane. The past decade has resolved how well-conserved strategies conduct electrons from the inner membrane to the outer surface. However, recent data suggest a much wider and less well understood collection of mechanisms enabling electron transfer to distant acceptors. This review reflects the current state of knowledge from Shewanella and Geobacter, specifically focusing on transfer across the outer membrane and beyond-an activity that enables reduction of highly variable minerals, electrodes, and even other organisms.
Collapse
Affiliation(s)
- J A Gralnick
- BioTechnology Institute and Department of Plant and Microbial Biology, University of Minnesota, St. Paul, Minnesota, USA; ,
| | - D R Bond
- BioTechnology Institute and Department of Plant and Microbial Biology, University of Minnesota, St. Paul, Minnesota, USA; ,
| |
Collapse
|
7
|
Yang G, Hou T, Lin A, Xia X, Quan X, Chen Z, Zhuang L. Sub-inhibitory concentrations of ampicillin affect microbial Fe(III) oxide reduction. JOURNAL OF HAZARDOUS MATERIALS 2023; 451:131131. [PMID: 36917911 DOI: 10.1016/j.jhazmat.2023.131131] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Revised: 03/01/2023] [Accepted: 03/01/2023] [Indexed: 06/18/2023]
Abstract
Antibiotics are ubiquitous in the iron-rich environments but their roles in microbial reduction of Fe(III) oxides are still unclear. Using ampicillin and Geobacter soli, this study investigated the underlying mechanism by which antibiotic regulated microbial reduction of Fe(III) oxides. Results showed that sub-minimal inhibitory concentrations (sub-MIC) of ampicillin significantly affected ferrihydrite reduction by G. soli, with a stimulatory effect at 1/64 and 1/32 MIC and an inhibitory effect at 1/8 MIC. Increasing ampicillin concentration resulted in increasing cell length and decreasing bacterial zeta potential that were beneficial for ferrihydrite reduction, and decreasing outer membrane permeability that was unfavorable for ferrihydrite reduction. The respiratory metabolism ability was enhanced by 1/64 and 1/32 MIC ampicillin and reduced by 1/8 MIC ampicillin, which was also responsible for regulation of ferrihydrite reduction by ampicillin. The ferrihydrite reduction showed a positive correlation with the redox activity of extracellular polymeric substances (EPS) which was tied to the cytochrome/polysaccharide ratio and the content of α-helices and β-sheet in EPS. These results suggested that ampicillin regulated microbial Fe(III) oxide reduction through modulating the bacterial morphology, metabolism activity and extracellular electron transfer ability. Our findings provide new insights into the environmental factors regulating biogeochemical cycling of iron.
Collapse
Affiliation(s)
- Guiqin Yang
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China
| | - Tiqun Hou
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China
| | - Annian Lin
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China
| | - Xue Xia
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China
| | - Xiaoyun Quan
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China
| | - Zhili Chen
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China
| | - Li Zhuang
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou 510632, China.
| |
Collapse
|
8
|
Zhang P, Meng X, Liu A, Ma M, Shao Y, Sun H. Biochar-derived dissolved black carbon accelerates ferrihydrite microbial transformation and subsequent imidacloprid degradation. JOURNAL OF HAZARDOUS MATERIALS 2023; 446:130685. [PMID: 36584647 DOI: 10.1016/j.jhazmat.2022.130685] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2022] [Revised: 12/25/2022] [Accepted: 12/26/2022] [Indexed: 06/17/2023]
Abstract
The effects of an electron shuttle (dissolved black carbon (DBC) derived from biochar) on the microbial reduction of ferrihydrite and subsequent imidacloprid (IMI) degradation were studied. The results showed that DBC addition enhanced the microbial reduction of Fe(III) in ferrihydrite and increased the quantity of Fe(II) released into the liquid phase. The electron transfer capacity of DBC was significantly influenced by the content of redox-active oxygen-containing functional groups (e.g., quinone, hydroquinone, and polyphenol groups), which was dependent on the pyrolysis temperature. The electrochemical characteristics of DBC resulted in enhanced electron transfer, which promoted Fe(III) reduction and mediated the microbial transformation of ferrihydrite. The microbial transformation of ferrihydrite resulted in the formation of secondary minerals such as siderite and vivianite. The IMI degradation efficiency was related to the Fe(III) reduction rate and the pyrolysis temperature used in DBC production, and the degradation pathways were nitrate reduction and imino hydrolysis induced by the Fe(II) generated from the reduction of Fe(III) in ferrihydrite. The results obtained in this study provide new data for understanding the multifunctional roles of biochar-derived DBC in the redox and transformation processes of iron minerals induced by iron-reducing bacteria, the related biogeochemical cycles of iron and the fate of pollutants.
Collapse
Affiliation(s)
- Peng Zhang
- Tianjin Engineering Center of Environmental Diagnosis and Contamination Remediation, Tianjin 300350, China; MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China.
| | - Xingying Meng
- Tianjin Engineering Center of Environmental Diagnosis and Contamination Remediation, Tianjin 300350, China; MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Aiju Liu
- School of Resources and Environmental Engineering, Shandong University of Technology, Zibo 255049, China
| | - Mingming Ma
- Tianjin Engineering Center of Environmental Diagnosis and Contamination Remediation, Tianjin 300350, China; MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Yifei Shao
- School of Resources and Environmental Engineering, Shandong University of Technology, Zibo 255049, China
| | - Hongwen Sun
- Tianjin Engineering Center of Environmental Diagnosis and Contamination Remediation, Tianjin 300350, China; MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| |
Collapse
|
9
|
Deng F, Olvera-Vargas H, Zhou M, Qiu S, Sirés I, Brillas E. Critical Review on the Mechanisms of Fe 2+ Regeneration in the Electro-Fenton Process: Fundamentals and Boosting Strategies. Chem Rev 2023; 123:4635-4662. [PMID: 36917618 DOI: 10.1021/acs.chemrev.2c00684] [Citation(s) in RCA: 63] [Impact Index Per Article: 31.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/16/2023]
Abstract
This review presents an exhaustive overview on the mechanisms of Fe3+ cathodic reduction within the context of the electro-Fenton (EF) process. Different strategies developed to improve the reduction rate are discussed, dividing them into two categories that regard the mechanistic feature that is promoted: electron transfer control and mass transport control. Boosting the Fe3+ conversion to Fe2+ via electron transfer control includes: (i) the formation of a series of active sites in both carbon- and metal-based materials and (ii) the use of other emerging strategies such as single-atom catalysis or confinement effects. Concerning the enhancement of Fe2+ regeneration by mass transport control, the main routes involve the application of magnetic fields, pulse electrolysis, interfacial Joule heating effects, and photoirradiation. Finally, challenges are singled out, and future prospects are described. This review aims to clarify the Fe3+/Fe2+ cycling process in the EF process, eventually providing essential ideas for smart design of highly effective systems for wastewater treatment and valorization at an industrial scale.
Collapse
Affiliation(s)
- Fengxia Deng
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, P. R. China.,Laboratori d'Electroquímica dels Materials i del Medi Ambient, Departament de Ciència de Materials i Química Física, Secció de Química Física, Facultat de Química, Universitat de Barcelona, Martí i Franquès 1-11, 08028 Barcelona, Spain
| | - Hugo Olvera-Vargas
- Instituto de Energías Renovables, Universidad Nacional Autónoma de México (IER-UNAM), Priv. Xochicalco S/N, Col. Centro, Temixco, Morelos CP 62580, México
| | - Minghua Zhou
- Key Laboratory of Pollution Process and Environmental Criteria, Ministry of Education, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, P. R. China
| | - Shan Qiu
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, P. R. China
| | - Ignasi Sirés
- Laboratori d'Electroquímica dels Materials i del Medi Ambient, Departament de Ciència de Materials i Química Física, Secció de Química Física, Facultat de Química, Universitat de Barcelona, Martí i Franquès 1-11, 08028 Barcelona, Spain
| | - Enric Brillas
- Laboratori d'Electroquímica dels Materials i del Medi Ambient, Departament de Ciència de Materials i Química Física, Secció de Química Física, Facultat de Química, Universitat de Barcelona, Martí i Franquès 1-11, 08028 Barcelona, Spain
| |
Collapse
|
10
|
Deng X, Okamoto A. Direct extracellular electron transfer to an indium tin doped oxide electrode via heme redox reactions in Desulfovibrio ferrophilus IS5. Electrochim Acta 2023. [DOI: 10.1016/j.electacta.2023.142293] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/29/2023]
|
11
|
Genetic Manipulation of Desulfovibrio ferrophilus and Evaluation of Fe(III) Oxide Reduction Mechanisms. Microbiol Spectr 2022; 10:e0392222. [PMID: 36445123 PMCID: PMC9769857 DOI: 10.1128/spectrum.03922-22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022] Open
Abstract
The sulfate-reducing microbe Desulfovibrio ferrophilus is of interest due to its relatively rare ability to also grow with Fe(III) oxide as an electron acceptor and its rapid corrosion of metallic iron. Previous studies have suggested multiple agents for D. ferrophilus extracellular electron exchange including a soluble electron shuttle, electrically conductive pili, and outer surface multiheme c-type cytochromes. However, the previous lack of a strategy for genetic manipulation of D. ferrophilus limited mechanistic investigations. We developed an electroporation-mediated transformation method that enabled replacement of D. ferrophilus genes of interest with an antibiotic resistance gene via double-crossover homologous recombination. Genes were identified that are essential for flagellum-based motility and the expression of the two types of D. ferrophilus pili. Disrupting flagellum-based motility or expression of either of the two pili did not inhibit Fe(III) oxide reduction, nor did deleting genes for multiheme c-type cytochromes predicted to be associated with the outer membrane. Although redundancies in cytochrome or pilus function might explain some of these phenotypes, overall, the results are consistent with D. ferrophilus primarily reducing Fe(III) oxide via an electron shuttle. The finding that D. ferrophilus is genetically tractable not only will aid in elucidating further details of its mechanisms for Fe(III) oxide reduction but also provides a new experimental approach for developing a better understanding of some of its other unique features, such as the ability to corrode metallic iron at high rates and accept electrons from negatively poised electrodes. IMPORTANCE Desulfovibrio ferrophilus is an important pure culture model for Fe(III) oxide reduction and the corrosion of iron-containing metals in anaerobic marine environments. This study demonstrates that D. ferrophilus is genetically tractable, an important advance for elucidating the mechanisms by which it interacts with extracellular electron acceptors and donors. The results demonstrate that there is not one specific outer surface multiheme D. ferrophilus c-type cytochrome that is essential for Fe(III) oxide reduction. This finding, coupled with the lack of apparent porin-cytochrome conduits encoded in the D. ferrophilus genome and the finding that deleting genes for pilus and flagellum expression did not inhibit Fe(III) oxide reduction, suggests that D. ferrophilus has adopted strategies for extracellular electron exchange that are different from those of intensively studied electroactive microbes like Shewanella and Geobacter species. Thus, the ability to genetically manipulate D. ferrophilus is likely to lead to new mechanistic concepts in electromicrobiology.
Collapse
|
12
|
Lu R, Chen Y, Wu J, Chen D, Wu Z, Xiao E. In situ COD monitoring with use of a hybrid of constructed wetland-microbial fuel cell. WATER RESEARCH 2022; 210:117957. [PMID: 34942527 DOI: 10.1016/j.watres.2021.117957] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Revised: 10/04/2021] [Accepted: 12/06/2021] [Indexed: 06/14/2023]
Abstract
The hybrid system of constructed wetland and microbial fuel cell (CW-MFC) used as a biosensor is becoming a new research focus with the advantage of resisting the shock loading and enriching more electricigens. In this study, a structural parameter S integrating the size, the position and the spacing of the anode and the cathode was proposed. And the electrogenesis and biosensing performances of the vertical flow CW-MFC biosensors were evaluated at different S values. The results showed that all the three biosensors could achieve good monitoring for COD (R2 > 0.97). And the coulombic yield was more suitable for the response signal than output voltage. But different biosensing properties including detection signal, detection range, detection time, correlation fitting degree and sensitivity were also displayed. Further, in order to optimize the biosensing performance, the coulombic yield in stable voltage stage (Qs) was proposed which can shorten the detection time by 70% at most. On the anodes, abundant nitrogen-transforming bacteria (NTB) were enriched as well as electrochemically active bacteria (EAB). The competition of NTB for substrates and electrons with EAB disturbed the output voltage signal but not affect the stability of coulombic yield signal. Moreover, the significant linear correlation between the S values and the ratios of EAB to NTB colonized both on anodes and on cathodes indicated the differences of the electricity generation and biosensing performance at the different structural parameters.
Collapse
Affiliation(s)
- Rui Lu
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China; School of Environmental Studies, China University of Geosciences, Wuhan 430074, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yuhua Chen
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Junmei Wu
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China
| | - Disong Chen
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China
| | - Zhenbin Wu
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China; School of Environmental Studies, China University of Geosciences, Wuhan 430074, China
| | - Enrong Xiao
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China.
| |
Collapse
|
13
|
Rivalland C, Radouani F, Gonzalez-Rizzo S, Robert F, Salvin P. Enrichment of Clostridia enhances Geobacter population and electron harvesting in a complex electroactive biofilm. Bioelectrochemistry 2022; 143:107954. [PMID: 34624726 DOI: 10.1016/j.bioelechem.2021.107954] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2021] [Revised: 09/09/2021] [Accepted: 09/20/2021] [Indexed: 11/26/2022]
Abstract
Current research on microbial fuel cell or microbial electrolysis cell dealt with finding new electroactive bacteria and understanding the mechanisms of electronic exchange. Complex consortia allowed to obtain better performances than pure cultures in part thanks to inter-species cooperation. However, the role of each bacterium in a complex biofilm in the electron harvest on an electrode remains unclear. Thus, we combined electrochemical monitoring of electron exchange and high throughput sequencing analysis in order to describe the bacterial composition and the electroactive performance of mangrove mud biofilms. In this study, secondary electroactive biofilms were formed on carbon electrodes from Desulfuromonas-dominated inoculum of pre-formed bioanodes. The performances and the Desulfuromonas-dominated profile were the same as those of primary bioanodes when the planktonic community was conserved. However, a Clostridium enrichment allowed to restore the performance in maximal current densities promoting an increase of Geobacter population, becoming the most dominant group among the Deltaproteobacteria, replacing Desulfuromonas. These results highlight a positive collaboration between Clostridium and Geobacter spp. helping a bacterial population to achieve with the depletion of their environment. Our study provides new insight into relationships between dominant electroactive bacteria and other bacteria species living in an organic matter-rich environment as mangrove sediments.
Collapse
Affiliation(s)
- Caroline Rivalland
- Laboratoire des Matériaux et Molécules en Milieu Agressif L3MA EA7526, UFR STE, Université des Antilles, Schœlcher, France
| | - Fatima Radouani
- Laboratoire des Matériaux et Molécules en Milieu Agressif L3MA EA7526, UFR STE, Université des Antilles, Schœlcher, France
| | - Silvina Gonzalez-Rizzo
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire Naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, Pointe-à-Pitre, France
| | - Florent Robert
- Laboratoire des Matériaux et Molécules en Milieu Agressif L3MA EA7526, UFR STE, Université des Antilles, Schœlcher, France
| | - Paule Salvin
- Laboratoire des Matériaux et Molécules en Milieu Agressif L3MA EA7526, UFR STE, Université des Antilles, Schœlcher, France.
| |
Collapse
|
14
|
Liang D, Liu X, Woodard TL, Holmes DE, Smith JA, Nevin KP, Feng Y, Lovley DR. Extracellular Electron Exchange Capabilities of Desulfovibrio ferrophilus and Desulfopila corrodens. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021; 55:16195-16203. [PMID: 34748326 DOI: 10.1021/acs.est.1c04071] [Citation(s) in RCA: 48] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Microbial extracellular electron transfer plays an important role in diverse biogeochemical cycles, metal corrosion, bioelectrochemical technologies, and anaerobic digestion. Evaluation of electron uptake from pure Fe(0) and stainless steel indicated that, in contrast to previous speculation in the literature, Desulfovibrio ferrophilus and Desulfopila corrodens are not able to directly extract electrons from solid-phase electron-donating surfaces. D. ferrophilus grew with Fe(III) as the electron acceptor, but Dp. corrodens did not. D. ferrophilus reduced Fe(III) oxide occluded within porous alginate beads, suggesting that it released a soluble electron shuttle to promote Fe(III) oxide reduction. Conductive atomic force microscopy revealed that the D. ferrophilus pili are electrically conductive and the expression of a gene encoding an aromatics-rich putative pilin was upregulated during growth on Fe(III) oxide. The expression of genes for multi-heme c-type cytochromes was not upregulated during growth with Fe(III) as the electron acceptor, and genes for a porin-cytochrome conduit across the outer membrane were not apparent in the genome. The results suggest that D. ferrophilus has adopted a novel combination of strategies to enable extracellular electron transport, which may be of biogeochemical and technological significance.
Collapse
Affiliation(s)
- Dandan Liang
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, P. R. China
| | - Xinying Liu
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
- College of Environmental Science and Engineering, Beijing Forestry University, Beijing 100083, China
| | - Trevor L Woodard
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
| | - Dawn E Holmes
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
- Department of Physical and Biological Sciences, Western New England University, Springfield, Massachusetts 01119-2612, United States
| | - Jessica A Smith
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
- Department of Biomolecular Sciences, Central Connecticut State University, New Britain, Connecticut 06053-2490, United States
| | - Kelly P Nevin
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
| | - Yujie Feng
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, P. R. China
| | - Derek R Lovley
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
| |
Collapse
|
15
|
Redwan AM, Millerick K. Anaerobic bacterial responses to carbonaceous materials and implications for contaminant transformation: Cellular, metabolic, and community level findings. BIORESOURCE TECHNOLOGY 2021; 341:125738. [PMID: 34474238 DOI: 10.1016/j.biortech.2021.125738] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2021] [Revised: 08/04/2021] [Accepted: 08/05/2021] [Indexed: 06/13/2023]
Abstract
Carbonaceous materials (CM) enhance the abundance and activity of bacteria capable of persistent organic (micro)pollutant (POP) degradation. This review synthesizes anaerobic bacterial responses to minimally modified CM in non-fuel cell bioremediation applications at three stages: attachment, metabolism, and biofilm genetic composition. Established relationships between biological behavior and CM surface properties are identified, but temporal relationships are not well understood, making it difficult to connect substratum properties and "pioneer" bacteria with mature microorganism-CM systems. Stark differences in laboratory methodology at each temporal stage results in observational, but not causative, linkages as system complexity increases. This review is the first to critically examine relationships between material and cellular properties with respect to time. The work highlights critical knowledge gaps that must be addressed to accurately predict microorganism-CM behavior and to tailor CM properties for optimized microbial activity, critical frontiers in establishing this approach as an effective bioremediation strategy.
Collapse
Affiliation(s)
- Asef Mohammad Redwan
- Department of Civil, Environmental & Construction Engineering, Texas Tech University, TX, United States
| | - Kayleigh Millerick
- Department of Civil, Environmental & Construction Engineering, Texas Tech University, TX, United States.
| |
Collapse
|
16
|
Huang J, Jones A, Waite TD, Chen Y, Huang X, Rosso KM, Kappler A, Mansor M, Tratnyek PG, Zhang H. Fe(II) Redox Chemistry in the Environment. Chem Rev 2021; 121:8161-8233. [PMID: 34143612 DOI: 10.1021/acs.chemrev.0c01286] [Citation(s) in RCA: 207] [Impact Index Per Article: 51.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Iron (Fe) is the fourth most abundant element in the earth's crust and plays important roles in both biological and chemical processes. The redox reactivity of various Fe(II) forms has gained increasing attention over recent decades in the areas of (bio) geochemistry, environmental chemistry and engineering, and material sciences. The goal of this paper is to review these recent advances and the current state of knowledge of Fe(II) redox chemistry in the environment. Specifically, this comprehensive review focuses on the redox reactivity of four types of Fe(II) species including aqueous Fe(II), Fe(II) complexed with ligands, minerals bearing structural Fe(II), and sorbed Fe(II) on mineral oxide surfaces. The formation pathways, factors governing the reactivity, insights into potential mechanisms, reactivity comparison, and characterization techniques are discussed with reference to the most recent breakthroughs in this field where possible. We also cover the roles of these Fe(II) species in environmental applications of zerovalent iron, microbial processes, biogeochemical cycling of carbon and nutrients, and their abiotic oxidation related processes in natural and engineered systems.
Collapse
Affiliation(s)
- Jianzhi Huang
- Department of Civil and Environmental Engineering, Case Western Reserve University, 2104 Adelbert Road, Cleveland, Ohio 44106, United States
| | - Adele Jones
- UNSW Water Research Centre, School of Civil and Environmental Engineering, University of New South Wales, Sydney, New South Wales 2052, Australia
| | - T David Waite
- UNSW Water Research Centre, School of Civil and Environmental Engineering, University of New South Wales, Sydney, New South Wales 2052, Australia
| | - Yiling Chen
- Institute of Environmental and Ecological Engineering, Guangdong University of Technology, Guangzhou 510006, China
| | - Xiaopeng Huang
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
| | - Kevin M Rosso
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
| | - Andreas Kappler
- Geomicrobiology, Center for Applied Geosciences, University of Tuebingen, 72076 Tuebingen, Germany
| | - Muammar Mansor
- Geomicrobiology, Center for Applied Geosciences, University of Tuebingen, 72076 Tuebingen, Germany
| | - Paul G Tratnyek
- School of Public Health, Oregon Health & Science University, 3181 SW Sam Jackson Park Road, Portland, Oregon 97239, United States
| | - Huichun Zhang
- Department of Civil and Environmental Engineering, Case Western Reserve University, 2104 Adelbert Road, Cleveland, Ohio 44106, United States
| |
Collapse
|
17
|
Flynn TM, Antonopoulos DA, Skinner KA, Brulc JM, Johnston E, Boyanov MI, Kwon MJ, Kemner KM, O’Loughlin EJ. Biogeochemical dynamics and microbial community development under sulfate- and iron-reducing conditions based on electron shuttle amendment. PLoS One 2021; 16:e0251883. [PMID: 34014980 PMCID: PMC8136678 DOI: 10.1371/journal.pone.0251883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Accepted: 05/04/2021] [Indexed: 11/19/2022] Open
Abstract
Iron reduction and sulfate reduction are two of the major biogeochemical processes that occur in anoxic sediments. Microbes that catalyze these reactions are therefore some of the most abundant organisms in the subsurface, and some of the most important. Due to the variety of mechanisms that microbes employ to derive energy from these reactions, including the use of soluble electron shuttles, the dynamics between iron- and sulfate-reducing populations under changing biogeochemical conditions still elude complete characterization. Here, we amended experimental bioreactors comprised of freshwater aquifer sediment with ferric iron, sulfate, acetate, and the model electron shuttle AQDS (9,10-anthraquinone-2,6-disulfonate) and monitored both the changing redox conditions as well as changes in the microbial community over time. The addition of the electron shuttle AQDS did increase the initial rate of FeIII reduction; however, it had little effect on the composition of the microbial community. Our results show that in both AQDS- and AQDS+ systems there was an initial dominance of organisms classified as Geobacter (a genus of dissimilatory FeIII-reducing bacteria), after which sequences classified as Desulfosporosinus (a genus of dissimilatory sulfate-reducing bacteria) came to dominate both experimental systems. Furthermore, most of the ferric iron reduction occurred under this later, ostensibly “sulfate-reducing” phase of the experiment. This calls into question the usefulness of classifying subsurface sediments by the dominant microbial process alone because of their interrelated biogeochemical consequences. To better inform models of microbially-catalyzed subsurface processes, such interactions must be more thoroughly understood under a broad range of conditions.
Collapse
Affiliation(s)
- Theodore M. Flynn
- Biosciences Division, Argonne National Laboratory, Lemont, Illinois, United States of America
| | | | - Kelly A. Skinner
- Biosciences Division, Argonne National Laboratory, Lemont, Illinois, United States of America
| | - Jennifer M. Brulc
- Biosciences Division, Argonne National Laboratory, Lemont, Illinois, United States of America
| | - Eric Johnston
- Biosciences Division, Argonne National Laboratory, Lemont, Illinois, United States of America
| | - Maxim I. Boyanov
- Biosciences Division, Argonne National Laboratory, Lemont, Illinois, United States of America
- Institute of Chemical Engineering, Bulgarian Academy of Sciences, Sofia, Bulgaria
| | - Man Jae Kwon
- Biosciences Division, Argonne National Laboratory, Lemont, Illinois, United States of America
- Department of Earth and Environmental Sciences, Korea University, Seoul, South Korea
| | - Kenneth M. Kemner
- Biosciences Division, Argonne National Laboratory, Lemont, Illinois, United States of America
| | - Edward J. O’Loughlin
- Biosciences Division, Argonne National Laboratory, Lemont, Illinois, United States of America
- * E-mail:
| |
Collapse
|
18
|
Yuan Q, Wang S, Wang X, Li N. Biosynthesis of vivianite from microbial extracellular electron transfer and environmental application. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 762:143076. [PMID: 33129535 DOI: 10.1016/j.scitotenv.2020.143076] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2020] [Revised: 10/01/2020] [Accepted: 10/11/2020] [Indexed: 06/11/2023]
Abstract
Vivianite (Fe3(PO4)2·8H2O) is a common hydrous ferrous phosphate mineral which often occurs in reductive conditions, especially anoxic non-sulfide environment containing high concentrations of ferrous iron (Fe2+) and orthophosphate (PO43-). Vivianite is an important product of dissimilatory iron reduction and a promising route for phosphorus recovery from wastewater. Its formation is closely related to the extracellular electron transfer (EET), a key mechanism for microbial respiration and a crucial explanation for the reduction of metal oxides in soil and sediments. Despite of the natural ubiquity, easy accessibility and attractive economic value, the application value of vivianite has not received much attention. This review introduces the characteristics, occurrence and biosynthesis of vivianite from microbial EET, and systematically analyzes the application value of vivianite in the environmental field, including immobilization of heavy metals (HMs), dechlorination of carbon tetrachloride (CT), sedimentary phosphorus sequestration and eutrophication alleviation. Additionally, its potential functions as a slow-release fertilizer are discussed as well. In general, vivianite is expected to make more contributions to the future scientific research, especially the solution of environmental problems. Overcoming the lack of understanding and some technical limitations will be beneficial to the further application of vivianite in environmental field.
Collapse
Affiliation(s)
- Qing Yuan
- Tianjin Key Lab of Indoor Air Environmental Quality Control, School of Environmental Science and Engineering, Tianjin University, No. 92 Weijin Road, Nankai District, Tianjin 300072, China
| | - Shu Wang
- Tianjin Key Lab of Indoor Air Environmental Quality Control, School of Environmental Science and Engineering, Tianjin University, No. 92 Weijin Road, Nankai District, Tianjin 300072, China
| | - Xin Wang
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, Tianjin Key Laboratory of Environmental Remediation and Pollution Control, Nankai University, No. 38 Tongyan Road, Jinnan District, Tianjin 300350, China
| | - Nan Li
- Tianjin Key Lab of Indoor Air Environmental Quality Control, School of Environmental Science and Engineering, Tianjin University, No. 92 Weijin Road, Nankai District, Tianjin 300072, China.
| |
Collapse
|
19
|
Lopez-Adams R, Newsome L, Moore KL, Lyon IC, Lloyd JR. Dissimilatory Fe(III) Reduction Controls on Arsenic Mobilization: A Combined Biogeochemical and NanoSIMS Imaging Approach. Front Microbiol 2021; 12:640734. [PMID: 33692773 PMCID: PMC7938665 DOI: 10.3389/fmicb.2021.640734] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2020] [Accepted: 01/22/2021] [Indexed: 11/13/2022] Open
Abstract
Microbial metabolism plays a key role in controlling the fate of toxic groundwater contaminants, such as arsenic. Dissimilatory metal reduction catalyzed by subsurface bacteria can facilitate the mobilization of arsenic via the reductive dissolution of As(V)-bearing Fe(III) mineral assemblages. The mobility of liberated As(V) can then be amplified via reduction to the more soluble As(III) by As(V)-respiring bacteria. This investigation focused on the reductive dissolution of As(V) sorbed onto Fe(III)-(oxyhydr)oxide by model Fe(III)- and As(V)-reducing bacteria, to elucidate the mechanisms underpinning these processes at the single-cell scale. Axenic cultures of Shewanella sp. ANA-3 wild-type (WT) cells [able to respire both Fe(III) and As(V)] were grown using 13C-labeled lactate on an arsenical Fe(III)-(oxyhydr)oxide thin film, and after colonization, the distribution of Fe and As in the solid phase was assessed using nanoscale secondary ion mass spectrometry (NanoSIMS), complemented with aqueous geochemistry analyses. Parallel experiments were conducted using an arrA mutant, able to respire Fe(III) but not As(V). NanoSIMS imaging showed that most metabolically active cells were not in direct contact with the Fe(III) mineral. Flavins were released by both strains, suggesting that these cell-secreted electron shuttles mediated extracellular Fe(III)-(oxyhydr)oxide reduction, but did not facilitate extracellular As(V) reduction, demonstrated by the presence of flavins yet lack of As(III) in the supernatants of the arrA deletion mutant strain. 3D reconstructions of NanoSIMS depth-profiled single cells revealed that As and Fe were associated with the cell surface in the WT cells, whereas for the arrA mutant, only Fe was associated with the biomass. These data were consistent with Shewanella sp. ANA-3 respiring As(V) in a multistep process; first, the reductive dissolution of the Fe(III) mineral released As(V), and once in solution, As(V) was respired by the cells to As(III). As well as highlighting Fe(III) reduction as the primary release mechanism for arsenic, our data also identified unexpected cellular As(III) retention mechanisms that require further investigation.
Collapse
Affiliation(s)
- Rebeca Lopez-Adams
- Department of Earth and Environmental Sciences, University of Manchester, Manchester, United Kingdom
| | - Laura Newsome
- Department of Earth and Environmental Sciences, University of Manchester, Manchester, United Kingdom.,Camborne School of Mines, Environment and Sustainability Institute, University of Exeter, Exeter, United Kingdom
| | - Katie L Moore
- Department of Materials, University of Manchester, Manchester, United Kingdom.,Photon Science Institute, University of Manchester, Manchester, United Kingdom
| | - Ian C Lyon
- Department of Earth and Environmental Sciences, University of Manchester, Manchester, United Kingdom.,Photon Science Institute, University of Manchester, Manchester, United Kingdom
| | - Jonathan R Lloyd
- Department of Earth and Environmental Sciences, University of Manchester, Manchester, United Kingdom
| |
Collapse
|
20
|
Yang Y, Xiao C, Yu Q, Zhao Z, Zhang Y. Using Fe(II)/Fe(III) as catalyst to drive a novel anammox process with no need of anammox bacteria. WATER RESEARCH 2021; 189:116626. [PMID: 33249306 DOI: 10.1016/j.watres.2020.116626] [Citation(s) in RCA: 53] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2020] [Revised: 11/04/2020] [Accepted: 11/08/2020] [Indexed: 06/12/2023]
Abstract
A novel 'anammox' in the absence of anammox bacteria was confirmed to occur in an anaerobic sludge slurry system, in which Fe(II)/Fe(III) cycle driven by NO2--induced Fe(II) oxidation and subsequent NH4+-induced Fe(III) reduction (Feammox) pushed the nitrogen removal. Results showed that Fe(II) contents significantly (p<0.05) decreased and Fe(III) accordingly increased with NO2- addition, indicating that Fe(II) was anaerobically oxidized to Fe(III). With depletion of NO2-, the Fe(II) content began to increase which was a result of Feammox. Consequently, 96.0% NH4+-N of the NO2--added reactor was removed during 18 days operation, while NH4+-N content remained essentially unchanged in the control in which NO2- was not added. X-ray diffraction (XRD) and X-ray Photoelectron Spectroscopy (XPS) analysis indicated that FeOOH was produced from chemical Fe(II) oxidation with NO2-. During the treatment, anammox bacteria was not detected, but the relative abundance of Geobacter of the NO2--added group increased by 13 folds. Isotope experiment in 15NH4+-containing reactors found that much more 30N2 and 29N2 in the 14NO2--added group were produced than those in the control (without 14NO2-), confirming that 14NO2- induced Fe(II) oxidation to participate in Feammox for 15NH4+ removal. Also, NO2- could be produced from partial denitrification of NO3-, meaning that NO3- as a more common species might substitute NO2- to trigger this new anammox process.
Collapse
Affiliation(s)
- Yafei Yang
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education, China), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China; School of Ecology and Environment, Zhengzhou University, Zhengzhou 450001, China
| | - Cancan Xiao
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education, China), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Qing Yu
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education, China), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Zhiqiang Zhao
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education, China), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Yaobin Zhang
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education, China), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China.
| |
Collapse
|
21
|
Shi J, Zhang B, Cheng Y, Peng K. Microbial vanadate reduction coupled to co-metabolic phenanthrene biodegradation in groundwater. WATER RESEARCH 2020; 186:116354. [PMID: 32882455 DOI: 10.1016/j.watres.2020.116354] [Citation(s) in RCA: 77] [Impact Index Per Article: 15.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2020] [Revised: 08/19/2020] [Accepted: 08/28/2020] [Indexed: 05/13/2023]
Abstract
Vanadate [V(V)] and phenanthrene (PHE) commonly coexist in groundwater aquifer, posing potential threats to ecological environment and public health. However, little is known about the complicated biogeochemical processes involving microbial V(V) reduction coupled with co-metabolic PHE biodegradation. Herein we demonstrated that synchronous removal of V(V) and PHE could be realized under anaerobic condition. Complete V(V) removal and PHE degradation efficiency of 82.0 ± 0.8% were achieved in 7-d operation in batch experiment. 250-d continuous column experiment implied that hydrochemical condition affected V(V) and PHE removals. V(V) was reduced to insoluble vanadium (IV) and PHE was degraded into small molecule organics (e.g. salicylic acid). Geobacter and Acetobacterium used methanol and intermediates from PHE degradation as electron donors for V(V) reduction. PHE was decomposed by Mycobacterium and Clostridium with methanol as co-metabolic substrate and V(V) as electron acceptor. Genes encoding proteins for V(V) reduction (omcA, omcB and mtrC) and PHE degradation (phnAc) were upregulated. Cytochrome c and nicotinamide adenine dinucleotide promoted electron transfer for V(V) and PHE detoxification. Extracellular polymeric substances could bind V(V) and improve the bioavailability of PHE. Our findings provide a robust strategy for remediation of V(V) and PHE co-contaminated groundwater.
Collapse
Affiliation(s)
- Jiaxin Shi
- School of Water Resources and Environment, MOE Key Laboratory of Groundwater Circulation and Environmental Evolution, China University of Geosciences (Beijing), Beijing 100083, P. R. China
| | - Baogang Zhang
- School of Water Resources and Environment, MOE Key Laboratory of Groundwater Circulation and Environmental Evolution, China University of Geosciences (Beijing), Beijing 100083, P. R. China.
| | - Yutong Cheng
- School of Water Resources and Environment, MOE Key Laboratory of Groundwater Circulation and Environmental Evolution, China University of Geosciences (Beijing), Beijing 100083, P. R. China
| | - Kejian Peng
- Hunan Research Academy of Environmental Sciences, Changsha 410004, P. R. China
| |
Collapse
|
22
|
Zhao S, Jin Q, Sheng Y, Agrawal A, Guo D, Dong H. Promotion of Microbial Oxidation of Structural Fe(II) in Nontronite by Oxalate and NTA. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2020; 54:13026-13035. [PMID: 32845130 DOI: 10.1021/acs.est.0c03702] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Iron redox cycling occurs extensively in soils and sediments. Previous research has focused on microbially mediated redox cycling of aqueous Fe. At circumneutral pH, most Fe occurs in solid phase, where Fe and organic ligands interact closely. However, the role of organic ligands in microbial oxidation of solid-phase Fe(II) is not well understood. Here, we incubated reduced nontronite NAu-2 (rNAu-2) with an iron-oxidizing bacterium and in the presence of oxalate and nitrilotriacetic acid. These ligands significantly enhanced the rate and extent of microbial oxidation of structural Fe(II) in rNAu-2. Aqueous and solid-phase analyses, coupled with biogeochemical modeling, revealed a pathway for ligand-enhanced bio-oxidation of solid-phase Fe(II): (1) dissolution of rNAu-2 to form aqueous Fe(II)-ligand complex; (2) bio-oxidation to Fe(III)-ligand complex; (3) rapid reduction of Fe(III)-ligand complex to Fe(II)-ligand complex by structural Fe(II) in rNAu-2. In this process, the Fe(II)-ligand and Fe(III)-ligand complexes effectively serve as electron shuttle to expand the bioavailable pool of solid-phase Fe(II). These results have important implications for a better understanding of the bioavailability and reactivity of solid-phase Fe pool in the environment.
Collapse
Affiliation(s)
- Simin Zhao
- Department of Geology and Environmental Earth Science, Miami University, Oxford, Ohio 45056, United States
| | - Qusheng Jin
- Department of Earth Sciences, University of Oregon, Eugene, Oregon 97403, United States
| | - Yizhi Sheng
- Department of Geology and Environmental Earth Science, Miami University, Oxford, Ohio 45056, United States
| | - Abinash Agrawal
- Department of Earth & Environmental Sciences, Wright State University, Dayton, Ohio 45435, United States
| | - Dongyi Guo
- Geomicrobiology Laboratory, State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Beijing 100083, China
| | - Hailiang Dong
- Department of Geology and Environmental Earth Science, Miami University, Oxford, Ohio 45056, United States
- Geomicrobiology Laboratory, State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Beijing 100083, China
| |
Collapse
|
23
|
Li X, Zeng X, Qiu D, Zhang Z, Zhang X, Shao Z. Extracellular electron transfer in fermentative bacterium Anoxybacter fermentans DY22613 T isolated from deep-sea hydrothermal sulfides. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 722:137723. [PMID: 32208240 DOI: 10.1016/j.scitotenv.2020.137723] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2020] [Revised: 03/02/2020] [Accepted: 03/02/2020] [Indexed: 06/10/2023]
Abstract
Dissimilatory Fe(III)-reducing bacteria (DIRBs) could reduce extracellular Fe(III) to Fe(II) via extracellular electron transfer (EET), playing an important role in biogeochemical cycling of Fe(III). Previous studies have noted the key role of multi-heme c-type cytochromes (MHCs) involved in EET by respiratory-type DIRBs, and proposed indirect electron transfer through the use of redox electron shuttles (e.g., flavins) or Fe(III)-chelation. However, knowledge about the EET of fermentative DIRBs was vitally scarce. Here, Anoxybacter fermentans DY22613T is a typical fermentative DIRB isolated from deep-sea hydrothermal sulfides, and it could utilize soluble Fe(III)-citrate and solid Fe(III)-bearing minerals as extracellular electron acceptors. Unlike respiratory-type DIRBs that utilize MHCs, this strain lacked MHCs to mediate EET. Besides, it did not adopt Fe(III)-chelation to mediate indirect EET. Nonetheless, genes encoding biosynthesis pathway of redox molecules (e.g., flavins) were found in its genome and their gene expression was up-regulated with Fe(III) reduction, suggesting redox molecules may mediate indirect EET by this strain. Subsequent physiological and biochemical tests further demonstrated endogenous riboflavin acted as main electron shuttles to mediate indirect EET by this strain, and menaquinone, indole played an assistant role in this process. Besides, this strain could employ exogenous humic acids to facilitate indirect EET. The mode of exogenous and endogenous redox molecules to co-mediate indirect EET by fermentative A. fermentans DY22613T, expands our knowledge about EET of fermentative DIRBs, and would contribute to better understand its ecological role in the biogeochemistry cycle of iron.
Collapse
Affiliation(s)
- Xi Li
- Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of PR China, Xiamen 361005, China; Key Lab of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China
| | - Xiang Zeng
- Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of PR China, Xiamen 361005, China
| | - Donghua Qiu
- Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of PR China, Xiamen 361005, China; Key Lab of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China
| | - Zhao Zhang
- Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of PR China, Xiamen 361005, China
| | - Xiaobo Zhang
- Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of PR China, Xiamen 361005, China
| | - Zongze Shao
- Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of PR China, Xiamen 361005, China.
| |
Collapse
|
24
|
Li RH, Cui JL, Hu JH, Wang WJ, Li B, Li XD, Li XY. Transformation of Fe-P Complexes in Bioreactors and P Recovery from Sludge: Investigation by XANES Spectroscopy. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2020; 54:4641-4650. [PMID: 32167751 DOI: 10.1021/acs.est.9b07138] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
The transformation of Fe-P complexes in bioreactors can be important for phosphorus (P) recovery from sludge. In this research, X-ray absorption near-edge structure analysis was conducted to quantify the transformation of Fe and P species in the sludge of different aging periods and in the subsequent acidogenic cofermentation for P recovery. P was readily removed from wastewater by Fe-facilitated coprecipitation and adsorption and could be extracted and recovered from sludge via acidogenic cofermentation and microbial iron reduction with food waste. The fresh Fe-based sludge mainly contained fresh ferrihydrite and amorphous FePO4 with sufficient accessible surface area, which was favorable for Fe-P mobilization and dissolution via microbial reaction. Ferric iron dosed into wastewater underwent rapid hydrolysis, clustering, aggregation, and slow crystallization to form hydrous iron oxides (HFO) with various complicated structures. With the aging of sludge in bioreactors, the HFO densified into phases with much reduced surface area and reactivity (e.g., goethite), which greatly increased the difficulty of P release and recovery. Thus, aging of P-containing sludge should be minimized in wastewater treatment systems for the purpose of P recovery.
Collapse
Affiliation(s)
- Ruo-Hong Li
- Shenzhen Engineering Research Laboratory for Sludge and Food Waste Treatment and Resource Recovery, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, China
| | - Jin-Li Cui
- Department of Civil and Environmental Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, China
- Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education; School of Environmental Science and Engineering, Guangzhou University, Guangzhou, China
| | - Jia-Hui Hu
- Shenzhen Engineering Research Laboratory for Sludge and Food Waste Treatment and Resource Recovery, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, China
| | - Wei-Jun Wang
- Shenzhen Engineering Research Laboratory for Sludge and Food Waste Treatment and Resource Recovery, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, China
| | - Bing Li
- Shenzhen Engineering Research Laboratory for Sludge and Food Waste Treatment and Resource Recovery, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, China
| | - Xiang-Dong Li
- Department of Civil and Environmental Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, China
| | - Xiao-Yan Li
- Shenzhen Engineering Research Laboratory for Sludge and Food Waste Treatment and Resource Recovery, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, China
- Environmental Engineering Research Centre, Department of Civil Engineering, The University of Hong Kong, Pokfulam, Hong Kong, China
- Tsinghua-Berkeley Shenzhen Institute, Tsinghua University, Shenzhen, China
| |
Collapse
|
25
|
Ding B, Qin Y, Luo W, Li Z. Spatial and seasonal distributions of Feammox from ecosystem habitats in the Wanshan region of the Taihu watershed, China. CHEMOSPHERE 2020; 239:124742. [PMID: 31514005 DOI: 10.1016/j.chemosphere.2019.124742] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2019] [Revised: 08/21/2019] [Accepted: 08/31/2019] [Indexed: 06/10/2023]
Abstract
Anaerobic ammonium oxidation coupled to Fe(III) reduction, termed Feammox, is a newly identified microbial process that occurs in nitrogen and iron cycles. As the seasonal distribution of Feammox in different ecosystem habitats has not been fully explored, this study investigated the potential Feammox rates and the diversity and abundance of iron reducing bacteria (IRB) in three habitats during two seasons by using isotope tracing technique and molecular analysis, respectively. Results showed that potential Feammox rates vary both seasonally and spatially, having relatively higher rates in summer (0.05-0.19 mg N kg-1 d-1) and lower rates in winter (0.02-0.09 mg N kg-1 d-1). In addition, relatively higher and lower rates were observed in farmland soils (0.09-0.19 mg N kg-1 d-1) and river sediments (0.02-0.05 mg N kg-1 d-1), respectively. The abundance and diversity of IRB were also found to vary both spatially and seasonally. Furthermore, the results show that Feammox may transform nitrogen at a rate of approximately 2.4-22.5 kg N ha-1 yr-1 within the investigated area. It is considered that the soil moisture, the Fe(III) content, and the total organic carbon are important factors controlling Feammox and IRB. Overall, these results extend current scientific knowledge about nitrogen and iron cycles in ecosystem habitats.
Collapse
Affiliation(s)
- Bangjing Ding
- State Key Laboratory of Pollution Control and Resource Reuse, Nanjing University, Nanjing, 210023, China; School of the Environment, Nanjing University, Nanjing, 210023, China
| | - Yunbin Qin
- State Key Laboratory of Pollution Control and Resource Reuse, Nanjing University, Nanjing, 210023, China; School of the Environment, Nanjing University, Nanjing, 210023, China
| | - Wenqi Luo
- State Key Laboratory of Pollution Control and Resource Reuse, Nanjing University, Nanjing, 210023, China; School of the Environment, Nanjing University, Nanjing, 210023, China
| | - Zhengkui Li
- State Key Laboratory of Pollution Control and Resource Reuse, Nanjing University, Nanjing, 210023, China; School of the Environment, Nanjing University, Nanjing, 210023, China.
| |
Collapse
|
26
|
Edwards MJ, Richardson DJ, Paquete CM, Clarke TA. Role of multiheme cytochromes involved in extracellular anaerobic respiration in bacteria. Protein Sci 2019; 29:830-842. [PMID: 31721352 PMCID: PMC7096707 DOI: 10.1002/pro.3787] [Citation(s) in RCA: 53] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2019] [Revised: 11/05/2019] [Accepted: 11/05/2019] [Indexed: 01/08/2023]
Abstract
Heme containing proteins are involved in a broad range of cellular functions, from oxygen sensing and transport to catalyzing oxidoreductive reactions. The two major types of cytochrome (b-type and c-type) only differ in their mechanism of heme attachment, but this has major implications for their cellular roles in both localization and mechanism. The b-type cytochromes are commonly cytoplasmic, or are within the cytoplasmic membrane, while c-type cytochromes are always found outside of the cytoplasm. The mechanism of heme attachment allows for complex c-type multiheme complexes, having the capacity to hold multiple electrons, to be assembled. These are increasingly being identified as secreted into the extracellular environment. For organisms that respire using extracellular substrates, these large multiheme cytochromes allow for electron transfer networks from the cytoplasmic membrane to the cell exterior for the reduction of extracellular electron acceptors. In this review the structures and functions of these networks and the mechanisms by which electrons are transferred to extracellular substrates is described.
Collapse
Affiliation(s)
- Marcus J Edwards
- Centre for Molecular and Structural Biochemistry, School of Biological Sciences and School of Chemistry, University of East Anglia, Norwich, UK
| | - David J Richardson
- Centre for Molecular and Structural Biochemistry, School of Biological Sciences and School of Chemistry, University of East Anglia, Norwich, UK
| | - Catarina M Paquete
- Instituto de Tecnologia Química e Biológica António Xavier, Universidade NOVA de Lisboa, Oeiras, Portugal
| | - Thomas A Clarke
- Centre for Molecular and Structural Biochemistry, School of Biological Sciences and School of Chemistry, University of East Anglia, Norwich, UK
| |
Collapse
|
27
|
Gao K, Jiang M, Guo C, Zeng Y, Fan C, Zhang J, Reinfelder JR, Huang W, Lu G, Dang Z. Reductive dissolution of jarosite by a sulfate reducing bacterial community: Secondary mineralization and microflora development. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 690:1100-1109. [PMID: 31470473 DOI: 10.1016/j.scitotenv.2019.06.483] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2019] [Revised: 06/13/2019] [Accepted: 06/27/2019] [Indexed: 06/10/2023]
Abstract
Jarosite is an iron-hydroxysulfate mineral commonly found in acid mine drainage (AMD). Given its strong adsorption capacity and its ability to co-precipitation with heavy metals, jarosite is considered a potent scavenger of contaminants in AMD-impacted environments. Sulfate-reducing bacteria (SRB) play an important role in the reductive dissolution of jarosite; however, the mechanism involved has yet to be elucidated. In this study, an indigenous SRB community enriched from the Dabaoshan mine area (Guangdong, China) was employed to explore the mechanism of the microbial reduction of jarosite. Different cultures, with or without dissolved sulfate and the physical separation of jarosite from bacteria by dialysis bags, were examined. Results indicate that the reduction of jarosite by SRB occurred via an indirect mechanism. In systems with dissolved sulfate, lactate was incompletely oxidized to acetate coupled with the reduction of SO42- to S2-, which subsequently reduced the Fe3+ in jarosite, forming secondary minerals including vivianite, mackinawite and pyrite. In systems without dissolved sulfate, jarosite dissolution occurred prior to reduction, and similar secondary minerals formed as well. Extracellular polymeric substances secreted by SRB appeared to facilitate the release of sulfate from jarosite. Structural sulfate in the solid phase of jarosite may not be available for SRB respiration. Although direct contact between SRB and jarosite is not necessary for mineral reduction, wrapping jarosite into dialysis bags suppressed the reduction to a certain extent. Microbial community composition differed in direct contact treatments and physical separation treatments. Physical separation of the SRB community from jarosite mineral supported the growth of Citrobacter, while Desulfosporosinus dominated in direct contact treatments.
Collapse
Affiliation(s)
- Kun Gao
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China; The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, South China University of Technology, Guangzhou 510006, PR China
| | - Mengge Jiang
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China; The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, South China University of Technology, Guangzhou 510006, PR China
| | - Chuling Guo
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China; The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, South China University of Technology, Guangzhou 510006, PR China.
| | - Yufei Zeng
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China
| | - Cong Fan
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China; The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, South China University of Technology, Guangzhou 510006, PR China
| | - Junhui Zhang
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China; The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, South China University of Technology, Guangzhou 510006, PR China
| | - John R Reinfelder
- Department of Environmental Sciences, Rutgers University, New Brunswick, NJ 08901, USA
| | - Weilin Huang
- Department of Environmental Sciences, Rutgers University, New Brunswick, NJ 08901, USA
| | - Guining Lu
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China; The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, South China University of Technology, Guangzhou 510006, PR China
| | - Zhi Dang
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China; The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, South China University of Technology, Guangzhou 510006, PR China.
| |
Collapse
|
28
|
Zhang Q, Chen H, Huang D, Xu C, Zhu H, Zhu Q. Water managements limit heavy metal accumulation in rice: Dual effects of iron-plaque formation and microbial communities. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 687:790-799. [PMID: 31412482 DOI: 10.1016/j.scitotenv.2019.06.044] [Citation(s) in RCA: 50] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2019] [Revised: 05/11/2019] [Accepted: 06/03/2019] [Indexed: 06/10/2023]
Abstract
Understanding the mechanisms on how water management can minimize the concentrations of heavy metals in rice grains is important. Two water managements were concerned in our studies, including continuously flooding and alternate wetting and drying (AWD). Compared to AWD, a continuously flooded culture reduces the concentration of cadmium and other metals in the rice grains by reducing the root-to-shoot translocation and the availability of metals in rhizosphere. In a flooded environment, the rice rhizosphere was characterized by an increased soil pH, reduced fluorescein diacetate (FDA) activity, and lower metal bioavailability. In addition, flooding significantly decreased the iron plaque on the root surface and reduced the affinity for metals in rhizosphere. Water managements significantly changed soil microbial diversity, especially the proportion of anaerobic bacteria, including the iron-reducing bacteria Latescibacteria, Desulfuromonadales, and Geobacteraceae. Interestingly, these bacteria exhibited a significant correlation with cadmium that was adsorbed on the root. This study revealed that continuously flooded culture is a valuable strategy for minimizing heavy metal accumulation in rice grains. By increasing the abundance of unique bacterial community, iron plaque formation and the affinity of metals in rhizosphere were reduced, and the uptake and accumulation of heavy metals in rice plants was finally mitigated.
Collapse
Affiliation(s)
- Quan Zhang
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China
| | - Haifei Chen
- College of Resources and Environment, Hunan Agricultural University, Changsha, China
| | - Daoyou Huang
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China
| | - Chao Xu
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China
| | - Hanhua Zhu
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China
| | - Qihong Zhu
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China.
| |
Collapse
|
29
|
Abstract
The study of electrically conductive protein nanowires in Geobacter sulfurreducens has led to new concepts for long-range extracellular electron transport, as well as for the development of sustainable conductive materials and electronic devices with novel functions. Until recently, electrically conductive pili (e-pili), assembled from the PilA pilin monomer, were the only known Geobacter protein nanowires. However, filaments comprised of the multi-heme c-type cytochrome, OmcS, are present in some preparations of G. sulfurreducens outer-surface proteins. The purpose of this review is to evaluate the available evidence on the in vivo expression of e-pili and OmcS filaments and their biological function. Abundant literature demonstrates that G. sulfurreducens expresses e-pili, which are required for long-range electron transport to Fe (III) oxides and through conductive biofilms. In contrast, there is no definitive evidence yet that wild-type G. sulfurreducens express long filaments of OmcS extending from the cells, and deleting the gene for OmcS actually increases biofilm conductivity. The literature does not support the concern that many previous studies on e-pili were mistakenly studying OmcS filaments. For example, heterologous expression of the aromatic-rich pilin monomer of Geobacter metallireducens in G. sulfurreducens increases the conductivity of individual nanowires more than 5,000-fold, whereas expression of an aromatic-poor pilin reduced conductivity more than 1,000-fold. This more than million-fold range in nanowire conductivity was achieved while maintaining the 3-nm diameter characteristic of e-pili. Purification methods that eliminate all traces of OmcS yield highly conductive e-pili, as does heterologous expression of the e-pilin monomer in microbes that do not produce OmcS or any other outer-surface cytochromes. Future studies of G. sulfurreducens expression of protein nanowires need to be cognizant of the importance of maintaining environmentally relevant growth conditions because artificial laboratory culture conditions can rapidly select against e-pili expression. Principles derived from the study of e-pili have enabled identification of non-cytochrome protein nanowires in diverse bacteria and archaea. A similar search for cytochrome appendages is warranted. Both e-pili and OmcS filaments offer design options for the synthesis of protein-based "green" electronics, which may be the primary driving force for the study of these structures in the near future.
Collapse
Affiliation(s)
- Derek R. Lovley
- Department of Microbiology, Institute for Applied Life Sciences, University of Massachusetts, Amherst, MA, United States
| | | |
Collapse
|
30
|
Newsome L, Lopez Adams R, Downie HF, Moore KL, Lloyd JR. NanoSIMS imaging of extracellular electron transport processes during microbial iron(III) reduction. FEMS Microbiol Ecol 2019; 94:5033680. [PMID: 29878195 PMCID: PMC6041951 DOI: 10.1093/femsec/fiy104] [Citation(s) in RCA: 47] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2018] [Accepted: 06/05/2018] [Indexed: 01/25/2023] Open
Abstract
Microbial iron(III) reduction can have a profound effect on the fate of contaminants in natural and engineered environments. Different mechanisms of extracellular electron transport are used by Geobacter and Shewanella spp. to reduce insoluble Fe(III) minerals. Here we prepared a thin film of iron(III)-(oxyhydr)oxide doped with arsenic, and allowed the mineral coating to be colonised by Geobacter sulfurreducens or Shewanella ANA3 labelled with 13C from organic electron donors. This preserved the spatial relationship between metabolically active Fe(III)-reducing bacteria and the iron(III)-(oxyhydr)oxide that they were respiring. NanoSIMS imaging showed cells of G. sulfurreducens were co-located with the iron(III)-(oxyhydr)oxide surface and were significantly more 13C-enriched compared to cells located away from the mineral, consistent with Geobacter species requiring direct contact with an extracellular electron acceptor to support growth. There was no such intimate relationship between 13C-enriched S. ANA3 and the iron(III)-(oxyhydr)oxide surface, consistent with Shewanella species being able to reduce Fe(III) indirectly using a secreted endogenous mediator. Some differences were observed in the amount of As relative to Fe in the local environment of G. sulfurreducens compared to the bulk mineral, highlighting the usefulness of this type of analysis for probing interactions between microbial cells and Fe-trace metal distributions in biogeochemical experiments.
Collapse
Affiliation(s)
- Laura Newsome
- Williamson Research Centre, School of Earth and Environmental Sciences, University of Manchester, Manchester, M13 9PL, UK
| | - Rebeca Lopez Adams
- Williamson Research Centre, School of Earth and Environmental Sciences, University of Manchester, Manchester, M13 9PL, UK
| | - Helen F Downie
- Williamson Research Centre, School of Earth and Environmental Sciences, University of Manchester, Manchester, M13 9PL, UK
| | - Katie L Moore
- School of Materials, University of Manchester, Manchester, M13 9PL, UK.,Photon Science Institute, University of Manchester, Manchester, M13 9PL, UK
| | - Jonathan R Lloyd
- Williamson Research Centre, School of Earth and Environmental Sciences, University of Manchester, Manchester, M13 9PL, UK
| |
Collapse
|
31
|
Tang HY, Holmes DE, Ueki T, Palacios PA, Lovley DR. Iron Corrosion via Direct Metal-Microbe Electron Transfer. mBio 2019; 10:e00303-19. [PMID: 31088920 PMCID: PMC6520446 DOI: 10.1128/mbio.00303-19] [Citation(s) in RCA: 71] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2019] [Accepted: 04/08/2019] [Indexed: 11/20/2022] Open
Abstract
The concept that anaerobic microorganisms can directly accept electrons from Fe(0) has been controversial because direct metal-microbe electron transfer has previously only been indirectly inferred. Fe(0) oxidation was studied with Geobacter sulfurreducens strain ACL, an autotrophic strain that was previously shown to grow with electrons derived from a graphite cathode as the sole electron donor. Strain ACL grew with Fe(0) as the sole electron donor and fumarate as the electron acceptor. However, it appeared that at least a portion of the electron transfer was via H2 produced nonenzymatically from the oxidation of Fe(0) to Fe(II). H2, which accumulated in abiotic controls, was consumed during the growth of strain ACL, the cells were predominately planktonic, and genes for the uptake hydrogenase were highly expressed. Strain ACLHF was constructed to prevent growth on H2 or formate by deleting the genes for the uptake of hydrogenase and formate dehydrogenases from strain ACL. Strain ACLHF also grew with Fe(0) as the sole electron donor, but H2 accumulated in the culture, and cells heavily colonized Fe(0) surfaces with no visible planktonic growth. Transcriptomics suggested that the outer surface c-type cytochromes OmcS and OmcZ were important during growth of strain ACLHF on Fe(0). Strain ACLHF did not grow on Fe(0) if the gene for either of these cytochromes was deleted. The specific attachment of strain ACLHF to Fe(0), coupled with requirements for known extracellular electrical contacts, suggest that direct metal-microbe electron transfer is the most likely option for Fe(0) serving as an electron donor.IMPORTANCE The anaerobic corrosion of iron structures is expensive to repair and can be a safety and environmental concern. It has been known for over 100 years that the presence of anaerobic respiratory microorganisms can accelerate iron corrosion. Multiple studies have suggested that there are sulfate reducers, methanogens, and acetogens that can directly accept electrons from Fe(0) to support sulfate or carbon dioxide reduction. However, all of the strains studied can also use H2 as an electron donor for growth, which is known to be abiotically produced from Fe(0). Furthermore, no proteins definitely shown to function as extracellular electrical contacts with Fe(0) were identified. The studies described here demonstrate that direct electron transfer from Fe(0) can support anaerobic respiration. They also map out a simple genetic approach to the study of iron corrosion mechanisms in other microorganisms. A better understanding of how microorganisms promote iron corrosion is expected to lead to the development of strategies that can help reduce adverse impacts from this process.
Collapse
Affiliation(s)
- Hai-Yan Tang
- Department of Microbiology, Morrill IV Science Center, University of Massachusetts Amherst, Amherst, Massachusetts, USA
- Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Jiangsu Collaborative Innovation Center for Solid Organic Waster Resource Utilization, Nanjing Agricultural University, Nanjing, China
| | - Dawn E Holmes
- Department of Microbiology, Morrill IV Science Center, University of Massachusetts Amherst, Amherst, Massachusetts, USA
- Department of Physical and Biological Sciences, Western New England University, Springfield, Massachusetts, USA
| | - Toshiyuki Ueki
- Department of Microbiology, Morrill IV Science Center, University of Massachusetts Amherst, Amherst, Massachusetts, USA
| | - Paola A Palacios
- Department of Microbiology, Morrill IV Science Center, University of Massachusetts Amherst, Amherst, Massachusetts, USA
- Department of Biology, University of Southern Denmark, Odense, Denmark
| | - Derek R Lovley
- Department of Microbiology, Morrill IV Science Center, University of Massachusetts Amherst, Amherst, Massachusetts, USA
| |
Collapse
|
32
|
Zhang Q, Zhang L, Liu T, Liu B, Huang D, Zhu Q, Xu C. The influence of liming on cadmium accumulation in rice grains via iron-reducing bacteria. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018; 645:109-118. [PMID: 30016706 DOI: 10.1016/j.scitotenv.2018.06.316] [Citation(s) in RCA: 46] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2018] [Revised: 06/01/2018] [Accepted: 06/26/2018] [Indexed: 06/08/2023]
Abstract
Cadmium (Cd) in soil is attracting worldwide attention, and many valuable measures and suggestions of minimizing the rice grain Cd are available. Among these methods, liming can increase the soil pH and decrease the rice grain Cd content. Here, we report that soil pH was negatively and significantly correlated with the concentration of soil extractable Fe and Cd. In addition, the iron concentration on root surface was significantly and positively associated with the available metals in soil and the rice grain Cd. However, the return of contaminated rice straw significantly increased the Cd accumulation in the rice grain, although the returned straw did not significantly influence the concentration of extracted soil Cd. Furthermore, an analysis of the functional microbe community was performed, and the response of iron-reducing bacteria (IRB) under the six treatments provides valuable insights for reducing the available Cd concentration in soil. A LEfSe (LDA coupled with effect size measurement for significant differences) analysis showed that the application of liming reduced the abundance of IRB. The results of a redundancy analysis (RDA) indicated that soil pH was significantly and negatively associated with the abundance of Proteobacteria and Geobacter and the concentration of bioavailable Fe and Cd in the soil, which could explain the reduced accumulation of bioavailable Cd in rice grain. Collectively, our results demonstrated that liming in Cd-polluted paddy soil is a reasonable strategy for minimizing rice grain Cd by increasing the soil pH, which reduces the soil available iron and Cd concentration by shifting the diversity and composition of IRB, thus ultimately resulting in decreased Cd in rice.
Collapse
Affiliation(s)
- Quan Zhang
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China
| | - Li Zhang
- College of Resources and Environmental Sciences, Hunan Normal University, Changsha 410081, China
| | - Tongtong Liu
- College of Agriculture, Yangtze University, Jingzhou 434025, China
| | - Bo Liu
- College of Agriculture, Yangtze University, Jingzhou 434025, China
| | - Daoyou Huang
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China
| | - Qihong Zhu
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China
| | - Chao Xu
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China.
| |
Collapse
|
33
|
Huang L, Tang J, Chen M, Liu X, Zhou S. Two Modes of Riboflavin-Mediated Extracellular Electron Transfer in Geobacter uraniireducens. Front Microbiol 2018; 9:2886. [PMID: 30538691 PMCID: PMC6277576 DOI: 10.3389/fmicb.2018.02886] [Citation(s) in RCA: 45] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Accepted: 11/12/2018] [Indexed: 12/31/2022] Open
Abstract
Anaerobes respire extracellular electron acceptors by extracellular electron transfer (EET). It is widely recognized that flavins can act as electron shuttles to facilitate this process. Flavin synthesis genes are widely distributed in Geobacter species. However, the functions of flavins in the EET of Geobacter species are unclear. Here, we demonstrate that G. uraniireducens can secrete abundant riboflavin (up to 270 nM) to facilitate EET. When an electrode was used as the electron acceptor, the quick recovery of anodizing current after anolyte replacement and the electrochemical behavior of the G. uraniireducens biofilm characterized by differential pulse voltammetry suggest that the self-secreted riboflavin promoted EET by serving as bound redox cofactors for cytochromes. On the contrary, when Fe(III) oxide was the electron acceptor, free riboflavin acted as electron shuttle to mediate the reduction of Fe(III) oxide. The results demonstrate the flexibility of flavins in EET, suggesting that the properties of electron acceptors can affect the binding mode of extracellular flavins, and broaden the knowledge of the EET of Geobacter species.
Collapse
Affiliation(s)
- Lingyan Huang
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Jiahuan Tang
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Man Chen
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Xing Liu
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Shungui Zhou
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, China
| |
Collapse
|
34
|
Enhancing Anaerobic Digestion: The Effect of Carbon Conductive Materials. C — JOURNAL OF CARBON RESEARCH 2018. [DOI: 10.3390/c4040059] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Anaerobic digestion is a well-known technology which has been extensively studied to improve its performance and yield biogas from substrates. The application of different types of pre-treatments has led to an increase in biogas production but also in global energy demand. However, in recent years the use of carbon conductive materials as supplement for this process has been studied resulting in an interesting way for improving the performance of anaerobic digestion without greatly affecting its energy demand. This review offers an introduction to this interesting approach and covers the different experiences performed on the use of carbon conductive materials proposing it as a feasible alternative for the production of energy from biomass, considering also the integration of anaerobic digestion and thermal valorisation.
Collapse
|
35
|
Costa NL, Clarke TA, Philipp LA, Gescher J, Louro RO, Paquete CM. Electron transfer process in microbial electrochemical technologies: The role of cell-surface exposed conductive proteins. BIORESOURCE TECHNOLOGY 2018; 255:308-317. [PMID: 29444758 DOI: 10.1016/j.biortech.2018.01.133] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2017] [Revised: 01/26/2018] [Accepted: 01/27/2018] [Indexed: 06/08/2023]
Abstract
Electroactive microorganisms have attracted significant interest for the development of novel biotechnological systems of low ecological footprint. These can be used for the sustainable production of energy, bioremediation of metal-contaminated environments and production of added-value products. Currently, almost 100 microorganisms from the Bacterial and Archaeal domains are considered electroactive, given their ability to efficiently interact with electrodes in microbial electrochemical technologies. Cell-surface exposed conductive proteins are key players in the electron transfer between cells and electrodes. Interestingly, it seems that among the electroactive organisms identified so far, these cell-surface proteins fall into one of four groups. In this review, the different types of cell-surface conductive proteins found in electroactive organisms will be overviewed, focusing on their structural and functional properties.
Collapse
Affiliation(s)
- Nazua L Costa
- Instituto de Tecnologia Química e Biológica António Xavier, Universidade NOVA de Lisboa, Av. da República-EAN, 2780-157, Oeiras, Portugal
| | - Thomas A Clarke
- Centre for Molecular and Structural Biochemistry, School of Biological Sciences and School of Chemistry, University of East Anglia, Norwich NR4 7TJ, United Kingdom
| | - Laura-Alina Philipp
- Department of Applied Biology, Institute for Applied Biosciences, Karlsruhe Institute of Technology (CS), Karlsruhe, Germany
| | - Johannes Gescher
- Department of Applied Biology, Institute for Applied Biosciences, Karlsruhe Institute of Technology (CS), Karlsruhe, Germany; Institute for Biological Interfaces, Karlsruhe Institute of Technology (KIT), Eggenstein-Leopoldshafen, Germany
| | - Ricardo O Louro
- Instituto de Tecnologia Química e Biológica António Xavier, Universidade NOVA de Lisboa, Av. da República-EAN, 2780-157, Oeiras, Portugal
| | - Catarina M Paquete
- Instituto de Tecnologia Química e Biológica António Xavier, Universidade NOVA de Lisboa, Av. da República-EAN, 2780-157, Oeiras, Portugal.
| |
Collapse
|
36
|
Abinandan S, Subashchandrabose SR, Venkateswarlu K, Megharaj M. Microalgae-bacteria biofilms: a sustainable synergistic approach in remediation of acid mine drainage. Appl Microbiol Biotechnol 2018; 102:1131-1144. [PMID: 29260261 DOI: 10.1007/s00253-017-8693-] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2017] [Revised: 12/03/2017] [Accepted: 12/04/2017] [Indexed: 05/28/2023]
Abstract
Microalgae and bacteria offer a huge potential in delving interest to study and explore various mechanisms under extreme environments. Acid mine drainage (AMD) is one such environment which is extremely acidic containing copious amounts of heavy metals and poses a major threat to the ecosystem. Despite its extreme conditions, AMD is the habitat for several microbes and their activities. The use of various chemicals in prevention of AMD formation and conventional treatment in a larger scale is not feasible under different geological conditions. It implies that microbe-mediated approach is a viable and sustainable alternative technology for AMD remediation. Microalgae in biofilms play a pivotal role in such bioremediation as they maintain mutualism with heterotrophic bacteria. Synergistic approach of using microalgae-bacteria biofilms provides supportive metabolites from algal biomass for growth of bacteria and mediates remediation of AMD. However, by virtue of their physiology and capabilities of metal removal, non-acidophilic microalgae can be acclimated for use in AMD remediation. A combination of selective acidophilic and non-acidophilic microalgae together with bacteria, all in the form of biofilms, may be very effective for bioremediation of metal-contaminated waters. The present review critically examines the nature of mutualistic interactions established between microalgae and bacteria in biofilms and their role in removal of metals from AMDs, and consequent biomass production for the yield of biofuel. Integration of microalgal-bacterial consortia in fuel cells would be an attractive emerging approach of microbial biotechnology for AMD remediation.
Collapse
Affiliation(s)
- Sudharsanam Abinandan
- Global Centre for Environmental Remediation (GCER), Faculty of Science, University of Newcastle, ATC Building, University Drive, Callaghan, NSW, 2308, Australia
| | - Suresh R Subashchandrabose
- Global Centre for Environmental Remediation (GCER), Faculty of Science, University of Newcastle, ATC Building, University Drive, Callaghan, NSW, 2308, Australia
- Cooperative Research Centre for Contamination Assessment and Remediation of Environment (CRC CARE), University of Newcastle, ATC Building, University Drive, Callaghan, NSW, 2308, Australia
| | - Kadiyala Venkateswarlu
- Formerly Department of Microbiology, Sri Krishnadevaraya University, Anantapur, 515055, India
| | - Mallavarapu Megharaj
- Global Centre for Environmental Remediation (GCER), Faculty of Science, University of Newcastle, ATC Building, University Drive, Callaghan, NSW, 2308, Australia.
- Cooperative Research Centre for Contamination Assessment and Remediation of Environment (CRC CARE), University of Newcastle, ATC Building, University Drive, Callaghan, NSW, 2308, Australia.
| |
Collapse
|
37
|
Zeng Z, Tice MM. Electron Transfer Strategies Regulate Carbonate Mineral and Micropore Formation. ASTROBIOLOGY 2018; 18:28-36. [PMID: 29265883 DOI: 10.1089/ast.2016.1560] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Some microbial carbonates are robust biosignatures due to their distinct morphologies and compositions. However, whether carbonates induced by microbial iron reduction have such features is unknown. Iron-reducing bacteria use various strategies to transfer electrons to iron oxide minerals (e.g., membrane-bound enzymes, soluble electron shuttles, nanowires, as well as different mechanisms for moving over or attaching to mineral surfaces). This diversity has the potential to create mineral biosignatures through manipulating the microenvironments in which carbonate precipitation occurs. We used Shewanella oneidensis MR-1, Geothrix fermentans, and Geobacter metallireducens GS-15, representing three different strategies, to reduce solid ferric hydroxide in order to evaluate their influence on carbonate and micropore formation (micro-size porosity in mineral rocks). Our results indicate that electron transfer strategies determined the morphology (rhombohedral, spherical, or long-chained) of precipitated calcium-rich siderite by controlling the level of carbonate saturation and the location of carbonate formation. Remarkably, electron transfer strategies also produced distinctive cell-shaped micropores in both carbonate and hydroxide minerals, thus producing suites of features that could potentially serve as biosignatures recording information about the sizes, shapes, and physiologies of iron-reducing organisms. Key Words: Microbial iron reduction-Micropore-Electron transfer strategies-Microbial carbonate. Astrobiology 18, 28-36.
Collapse
Affiliation(s)
- Zhirui Zeng
- Department of Geology and Geophysics, Texas A&M University , College Station, Texas
| | - Michael M Tice
- Department of Geology and Geophysics, Texas A&M University , College Station, Texas
| |
Collapse
|
38
|
Microalgae-bacteria biofilms: a sustainable synergistic approach in remediation of acid mine drainage. Appl Microbiol Biotechnol 2017; 102:1131-1144. [PMID: 29260261 DOI: 10.1007/s00253-017-8693-7] [Citation(s) in RCA: 53] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2017] [Revised: 12/03/2017] [Accepted: 12/04/2017] [Indexed: 10/18/2022]
Abstract
Microalgae and bacteria offer a huge potential in delving interest to study and explore various mechanisms under extreme environments. Acid mine drainage (AMD) is one such environment which is extremely acidic containing copious amounts of heavy metals and poses a major threat to the ecosystem. Despite its extreme conditions, AMD is the habitat for several microbes and their activities. The use of various chemicals in prevention of AMD formation and conventional treatment in a larger scale is not feasible under different geological conditions. It implies that microbe-mediated approach is a viable and sustainable alternative technology for AMD remediation. Microalgae in biofilms play a pivotal role in such bioremediation as they maintain mutualism with heterotrophic bacteria. Synergistic approach of using microalgae-bacteria biofilms provides supportive metabolites from algal biomass for growth of bacteria and mediates remediation of AMD. However, by virtue of their physiology and capabilities of metal removal, non-acidophilic microalgae can be acclimated for use in AMD remediation. A combination of selective acidophilic and non-acidophilic microalgae together with bacteria, all in the form of biofilms, may be very effective for bioremediation of metal-contaminated waters. The present review critically examines the nature of mutualistic interactions established between microalgae and bacteria in biofilms and their role in removal of metals from AMDs, and consequent biomass production for the yield of biofuel. Integration of microalgal-bacterial consortia in fuel cells would be an attractive emerging approach of microbial biotechnology for AMD remediation.
Collapse
|
39
|
Zacharoff LA, Morrone DJ, Bond DR. Geobacter sulfurreducens Extracellular Multiheme Cytochrome PgcA Facilitates Respiration to Fe(III) Oxides But Not Electrodes. Front Microbiol 2017; 8:2481. [PMID: 29312190 PMCID: PMC5732950 DOI: 10.3389/fmicb.2017.02481] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2017] [Accepted: 11/29/2017] [Indexed: 11/13/2022] Open
Abstract
Extracellular cytochromes are hypothesized to facilitate the final steps of electron transfer between the outer membrane of the metal-reducing bacterium Geobacter sulfurreducens and solid-phase electron acceptors such as metal oxides and electrode surfaces during the course of respiration. The triheme c-type cytochrome PgcA exists in the extracellular space of G. sulfurreducens, and is one of many multiheme c-type cytochromes known to be loosely bound to the bacterial outer surface. Deletion of pgcA using a markerless method resulted in mutants unable to transfer electrons to Fe(III) and Mn(IV) oxides; yet the same mutants maintained the ability to respire to electrode surfaces and soluble Fe(III) citrate. When expressed and purified from Shewanella oneidensis, PgcA demonstrated a primarily alpha helical structure, three bound hemes, and was processed into a shorter 41 kDa form lacking the lipodomain. Purified PgcA bound Fe(III) oxides, but not magnetite, and when PgcA was added to cell suspensions of G. sulfurreducens, PgcA accelerated Fe(III) reduction similar to addition of FMN. Addition of soluble PgcA to ΔpgcA mutants also restored Fe(III) reduction. This report highlights a distinction between proteins involved in extracellular electron transfer to metal oxides and poised electrodes, and suggests a specific role for PgcA in facilitating electron transfer at mineral surfaces.
Collapse
Affiliation(s)
- Lori A Zacharoff
- Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, MN, United States
| | - Dana J Morrone
- St. Louis College of Pharmacy, St. Louis, MO, United States
| | - Daniel R Bond
- Department of Plant and Microbial Biology, University of Minnesota, Minneapolis, MN, United States.,BioTechnology Institute, University of Minnesota, Minneapolis, MN, United States
| |
Collapse
|
40
|
Electrochemical and spectroscopic insights into the mechanisms of bidirectional microbe-electrode electron transfer in Geobacter soli biofilms. Electrochem commun 2017. [DOI: 10.1016/j.elecom.2017.03.004] [Citation(s) in RCA: 49] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
|
41
|
Significance of a Posttranslational Modification of the PilA Protein of Geobacter sulfurreducens for Surface Attachment, Biofilm Formation, and Growth on Insoluble Extracellular Electron Acceptors. J Bacteriol 2017; 199:JB.00716-16. [PMID: 28138101 DOI: 10.1128/jb.00716-16] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2016] [Accepted: 01/23/2017] [Indexed: 12/14/2022] Open
Abstract
Geobacter sulfurreducens, an anaerobic metal-reducing bacterium, possesses type IV pili. These pili are intrinsic structural elements in biofilm formation and, together with a number of c-type cytochromes, are thought to serve as conductive nanowires enabling long-range electron transfer (ET) to metal oxides and graphite anodes. Here, we report that a posttranslational modification of a nonconserved amino acid residue within the PilA protein, the structural subunit of the type IV pili, is crucial for growth on insoluble extracellular electron acceptors. Matrix-assisted laser desorption ionization (MALDI) mass spectrometry of the secreted PilA protein revealed a posttranslational modification of tyrosine-32 with a moiety of a mass consistent with a glycerophosphate group. Mutating this tyrosine into a phenylalanine inhibited cell growth with Fe(III) oxides as the sole electron acceptor. In addition, this amino acid substitution severely diminished biofilm formation on graphite surfaces and impaired current output in microbial fuel cells. These results demonstrate that the capability to attach to insoluble electron acceptors plays a crucial role for the cells' ability to utilize them. The work suggests that glycerophosphate modification of Y32 is a key factor contributing to the surface charge of type IV pili, influencing the adhesion of Geobacter to specific surfaces.IMPORTANCE Type IV pili are bacterial appendages that function in cell adhesion, virulence, twitching motility, and long-range electron transfer (ET) from bacterial cells to insoluble extracellular electron acceptors. The mechanism and role of type IV pili for ET in Geobacter sulfurreducens is still a subject of research. In this study, we identified a posttranslational modification of the major G. sulfurreducens type IV pilin, suggested to be a glycerophosphate moiety. We show that a mutant in which the glycerophosphate-modified tyrosine-32 is replaced with a phenylalanine has reduced abilities for ET and biofilm formation compared with those of the wild type. The results show the importance of the glycerophosphate-modified tyrosine for surface attachment and electron transfer in electrode- or Fe(III)-respiring G. sulfurreducens cells.
Collapse
|
42
|
Tan Y, Adhikari RY, Malvankar NS, Ward JE, Nevin KP, Woodard TL, Smith JA, Snoeyenbos-West OL, Franks AE, Tuominen MT, Lovley DR. The Low Conductivity of Geobacter uraniireducens Pili Suggests a Diversity of Extracellular Electron Transfer Mechanisms in the Genus Geobacter. Front Microbiol 2016; 7:980. [PMID: 27446021 PMCID: PMC4923279 DOI: 10.3389/fmicb.2016.00980] [Citation(s) in RCA: 65] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2016] [Accepted: 06/07/2016] [Indexed: 11/30/2022] Open
Abstract
Studies on the mechanisms for extracellular electron transfer in Geobacter species have primarily focused on Geobacter sulfurreducens, but the poor conservation of genes for some electron transfer components within the Geobacter genus suggests that there may be a diversity of extracellular electron transport strategies among Geobacter species. Examination of the gene sequences for PilA, the type IV pilus monomer, in Geobacter species revealed that the PilA sequence of Geobacter uraniireducens was much longer than that of G. sulfurreducens. This is of interest because it has been proposed that the relatively short PilA sequence of G. sulfurreducens is an important feature conferring conductivity to G. sulfurreducens pili. In order to investigate the properties of the G. uraniireducens pili in more detail, a strain of G. sulfurreducens that expressed pili comprised the PilA of G. uraniireducens was constructed. This strain, designated strain GUP, produced abundant pili, but generated low current densities and reduced Fe(III) very poorly. At pH 7, the conductivity of the G. uraniireducens pili was 3 × 10-4 S/cm, much lower than the previously reported 5 × 10-2 S/cm conductivity of G. sulfurreducens pili at the same pH. Consideration of the likely voltage difference across pili during Fe(III) oxide reduction suggested that G. sulfurreducens pili can readily accommodate maximum reported rates of respiration, but that G. uraniireducens pili are not sufficiently conductive to be an effective mediator of long-range electron transfer. In contrast to G. sulfurreducens and G. metallireducens, which require direct contact with Fe(III) oxides in order to reduce them, G. uraniireducens reduced Fe(III) oxides occluded within microporous beads, demonstrating that G. uraniireducens produces a soluble electron shuttle to facilitate Fe(III) oxide reduction. The results demonstrate that Geobacter species may differ substantially in their mechanisms for long-range electron transport and that it is important to have information beyond a phylogenetic affiliation in order to make conclusions about the mechanisms by which Geobacter species are transferring electrons to extracellular electron acceptors.
Collapse
Affiliation(s)
- Yang Tan
- Department of Microbiology, University of Massachusetts Amherst, Amherst, MA, USA
| | - Ramesh Y Adhikari
- Department of Physics, University of Massachusetts Amherst Amherst, MA, USA
| | - Nikhil S Malvankar
- Department of Microbiology, University of Massachusetts Amherst,Amherst, MA, USA; Department of Physics, University of Massachusetts AmherstAmherst, MA, USA; Department of Molecular Biophysics and Biochemistry, Microbial Sciences Institute, Yale UniversityNew Haven, CT, USA
| | - Joy E Ward
- Department of Microbiology, University of Massachusetts Amherst, Amherst, MA, USA
| | - Kelly P Nevin
- Department of Microbiology, University of Massachusetts Amherst, Amherst, MA, USA
| | - Trevor L Woodard
- Department of Microbiology, University of Massachusetts Amherst, Amherst, MA, USA
| | - Jessica A Smith
- Department of Microbiology, University of Massachusetts Amherst, Amherst, MA, USA
| | | | - Ashley E Franks
- Department of Microbiology, University of Massachusetts Amherst,Amherst, MA, USA; Department of Physiology, Anatomy and Microbiology, La Trobe UniversityMelbourne, VIC, Australia
| | - Mark T Tuominen
- Department of Physics, University of Massachusetts Amherst Amherst, MA, USA
| | - Derek R Lovley
- Department of Microbiology, University of Massachusetts Amherst, Amherst, MA, USA
| |
Collapse
|
43
|
Zhao Z, Zhang Y, Quan X, Zhao H. Evaluation on direct interspecies electron transfer in anaerobic sludge digestion of microbial electrolysis cell. BIORESOURCE TECHNOLOGY 2016; 200:235-44. [PMID: 26492177 DOI: 10.1016/j.biortech.2015.10.021] [Citation(s) in RCA: 94] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2015] [Revised: 09/29/2015] [Accepted: 10/01/2015] [Indexed: 05/16/2023]
Abstract
Increase of methanogenesis in methane-producing microbial electrolysis cells (MECs) is frequently believed as a result of cathodic reduction of CO2. Recent studies indicated that this electromethanogenesis only accounted for a little part of methane production during anaerobic sludge digestion. Instead, direct interspecies electron transfer (DIET) possibly plays an important role in methane production. In this study, anaerobic digestion of sludge were investigated in a single-chamber MEC reactor, a carbon-felt supplemented reactor and a common anaerobic reactor to evaluate the effects of DIET on the sludge digestion. The results showed that adding carbon felt into the reactor increased 12.9% of methane production and 17.2% of sludge reduction. Imposing a voltage on the carbon felt further improved the digestion. Current calculation showed that the cathodic reduction only contributed to 27.5% of increased methane production. Microbial analysis indicated that DIET played an important role in the anaerobic sludge digestion in the MEC.
Collapse
Affiliation(s)
- Zisheng Zhao
- Key Laboratory of Industrial Ecology and Environmental Engineering, Ministry of Education, School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Yaobin Zhang
- Key Laboratory of Industrial Ecology and Environmental Engineering, Ministry of Education, School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China.
| | - Xie Quan
- Key Laboratory of Industrial Ecology and Environmental Engineering, Ministry of Education, School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Huimin Zhao
- Key Laboratory of Industrial Ecology and Environmental Engineering, Ministry of Education, School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| |
Collapse
|
44
|
Hubenova Y, Mitov M. Mitochondrial origin of extracelullar transferred electrons in yeast-based biofuel cells. Bioelectrochemistry 2015; 106:232-9. [DOI: 10.1016/j.bioelechem.2014.06.005] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2014] [Accepted: 06/17/2014] [Indexed: 11/24/2022]
|
45
|
Hubenova Y, Mitov M. Extracellular electron transfer in yeast-based biofuel cells: A review. Bioelectrochemistry 2015; 106:177-85. [DOI: 10.1016/j.bioelechem.2015.04.001] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2014] [Revised: 03/31/2015] [Accepted: 04/01/2015] [Indexed: 10/23/2022]
|
46
|
Li X, Hou L, Liu M, Zheng Y, Yin G, Lin X, Cheng L, Li Y, Hu X. Evidence of Nitrogen Loss from Anaerobic Ammonium Oxidation Coupled with Ferric Iron Reduction in an Intertidal Wetland. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2015; 49:11560-11568. [PMID: 26360245 DOI: 10.1021/acs.est.5b03419] [Citation(s) in RCA: 117] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Anaerobic ammonium oxidation coupled with nitrite reduction is an important microbial pathway of nitrogen removal in intertidal wetlands. However, little is known about the role of anaerobic ammonium oxidation coupled with ferric iron reduction (termed Feammox) in intertidal nitrogen cycling. In this study, sediment slurry incubation experiments were combined with an isotope-tracing technique to examine the dynamics of Feammox and its association with tidal fluctuations in the intertidal wetland of the Yangtze Estuary. Feammox was detected in the intertidal wetland sediments, with potential rates of 0.24-0.36 mg N kg(-1) d(-1). The Feammox rates in the sediments were generally higher during spring tides than during neap tides. The tidal fluctuations affected the growth of iron-reducing bacteria and reduction of ferric iron, which mediated Feammox activity and the associated nitrogen loss from intertidal wetlands to the atmosphere. An estimated loss of 11.5-18 t N km(-2) year(-1) was linked to Feammox, accounting for approximately 3.1-4.9% of the total external inorganic nitrogen transported into the Yangtze Estuary wetland each year. Overall, the co-occurrence of ferric iron reduction and ammonium oxidation suggests that Feammox can act as an ammonium removal mechanism in intertidal wetlands.
Collapse
Affiliation(s)
- Xiaofei Li
- College of Geographical Sciences, and ‡State Key Laboratory of Estuarine and Coastal Research, East China Normal University , 3663 North Zhongshan Road, Shanghai 200062, China
| | - Lijun Hou
- College of Geographical Sciences, and ‡State Key Laboratory of Estuarine and Coastal Research, East China Normal University , 3663 North Zhongshan Road, Shanghai 200062, China
| | - Min Liu
- College of Geographical Sciences, and ‡State Key Laboratory of Estuarine and Coastal Research, East China Normal University , 3663 North Zhongshan Road, Shanghai 200062, China
| | - Yanling Zheng
- College of Geographical Sciences, and ‡State Key Laboratory of Estuarine and Coastal Research, East China Normal University , 3663 North Zhongshan Road, Shanghai 200062, China
| | - Guoyu Yin
- College of Geographical Sciences, and ‡State Key Laboratory of Estuarine and Coastal Research, East China Normal University , 3663 North Zhongshan Road, Shanghai 200062, China
| | - Xianbiao Lin
- College of Geographical Sciences, and ‡State Key Laboratory of Estuarine and Coastal Research, East China Normal University , 3663 North Zhongshan Road, Shanghai 200062, China
| | - Lv Cheng
- College of Geographical Sciences, and ‡State Key Laboratory of Estuarine and Coastal Research, East China Normal University , 3663 North Zhongshan Road, Shanghai 200062, China
| | - Ye Li
- College of Geographical Sciences, and ‡State Key Laboratory of Estuarine and Coastal Research, East China Normal University , 3663 North Zhongshan Road, Shanghai 200062, China
| | - Xiaoting Hu
- College of Geographical Sciences, and ‡State Key Laboratory of Estuarine and Coastal Research, East China Normal University , 3663 North Zhongshan Road, Shanghai 200062, China
| |
Collapse
|
47
|
Hanson TE, Bonsu E, Tuerk A, Marnocha CL, Powell DH, Chan CS. Chlorobaculum tepidumgrowth on biogenic S(0) as the sole photosynthetic electron donor. Environ Microbiol 2015; 18:2856-67. [DOI: 10.1111/1462-2920.12995] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2015] [Accepted: 07/21/2015] [Indexed: 11/28/2022]
Affiliation(s)
- Thomas E. Hanson
- School of Marine Science and Policy; University of Delaware; Newark DE 19711 USA
- Department of Biological Sciences; University of Delaware; Newark DE 19711 USA
- Delaware Biotechnology Institute; University of Delaware; Newark DE 19711 USA
| | - Ernest Bonsu
- Department of Biological Sciences; University of Delaware; Newark DE 19711 USA
| | - Amalie Tuerk
- Department of Chemical and Biomolecular Engineering; University of Delaware; Newark DE 19711 USA
| | | | - Deborah H. Powell
- Delaware Biotechnology Institute; University of Delaware; Newark DE 19711 USA
| | - Clara S. Chan
- School of Marine Science and Policy; University of Delaware; Newark DE 19711 USA
- Department of Geological Sciences; University of Delaware; Newark DE 19711 USA
- Delaware Biotechnology Institute; University of Delaware; Newark DE 19711 USA
| |
Collapse
|
48
|
Zhao Z, Zhang Y, Wang L, Quan X. Potential for direct interspecies electron transfer in an electric-anaerobic system to increase methane production from sludge digestion. Sci Rep 2015; 5:11094. [PMID: 26057581 PMCID: PMC4650609 DOI: 10.1038/srep11094] [Citation(s) in RCA: 86] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2015] [Accepted: 04/29/2015] [Indexed: 11/09/2022] Open
Abstract
Direct interspecies electron transfer (DIET) between Geobacter species and Methanosaeta species is an alternative to interspecies hydrogen transfer (IHT) in anaerobic digester, which however has not been established in anaerobic sludge digestion as well as in bioelectrochemical systems yet. In this study, it was found that over 50% of methane production of an electric-anaerobic sludge digester was resulted from unknown pathway. Pyrosequencing analysis revealed that Geobacter species were significantly enriched with electrodes. Fluorescence in situ hybridization (FISH) further confirmed that the dominant Geobacter species enriched belonged to Geobacter metallireducens. Together with Methanosaeta species prevailing in the microbial communities, the direct electron exchange between Geobacter species and Methanosaeta species might be an important reason for the "unknown" increase of methane production. Conductivity of the sludge in this electric-anaerobic digester was about 30% higher than that of the sludge in a control digester without electrodes. This study not only revealed for the first time that DIET might be the important mechanism on the methanogenesis of bioelectrochemical system, but also provided a new method to enhance DIET by means of bioelectric enrichment of Geobacter species.
Collapse
Affiliation(s)
- Zhiqiang Zhao
- Key Laboratory of Industrial Ecology and Environmental Engineering (Dalian University of Technology), Ministry of Education, School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Yaobin Zhang
- 1] Key Laboratory of Industrial Ecology and Environmental Engineering (Dalian University of Technology), Ministry of Education, School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China [2] Department of Microbiology, University of Massachusetts, Amherst, MA 01003-9298, USA
| | - Liying Wang
- 1] Department of Microbiology, University of Massachusetts, Amherst, MA 01003-9298, USA [2] State Key Laboratory of Bioreactor Engineering and Institute of Applied Chemistry, East China University of Science and Technology, Shanghai, P.R. China
| | - Xie Quan
- Key Laboratory of Industrial Ecology and Environmental Engineering (Dalian University of Technology), Ministry of Education, School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| |
Collapse
|
49
|
Mechanisms involved in Fe(III) respiration by the hyperthermophilic archaeon Ferroglobus placidus. Appl Environ Microbiol 2015; 81:2735-44. [PMID: 25662973 DOI: 10.1128/aem.04038-14] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Abstract
The hyperthermophilic archaeon Ferroglobus placidus can utilize a wide variety of electron donors, including hydrocarbons and aromatic compounds, with Fe(III) serving as an electron acceptor. In Fe(III)-reducing bacteria that have been studied to date, this process is mediated by c-type cytochromes and type IV pili. However, there currently is little information available about how this process is accomplished in archaea. In silico analysis of the F. placidus genome revealed the presence of 30 genes coding for putative c-type cytochrome proteins (more than any other archaeon that has been sequenced to date), five of which contained 10 or more heme-binding motifs. When cell extracts were analyzed by SDS-PAGE followed by heme staining, multiple bands corresponding to c-type cytochromes were detected. Different protein expression patterns were observed in F. placidus cells grown on soluble and insoluble iron forms. In order to explore this result further, transcriptomic studies were performed. Eight genes corresponding to multiheme c-type cytochromes were upregulated when F. placidus was grown with insoluble Fe(III) oxide compared to soluble Fe(III) citrate as an electron acceptor. Numerous archaella (archaeal flagella) also were observed on Fe(III)-grown cells, and genes coding for two type IV pilin-like domain proteins were differentially expressed in Fe(III) oxide-grown cells. This study provides insight into the mechanisms for dissimilatory Fe(III) respiration by hyperthermophilic archaea.
Collapse
|
50
|
|