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Liu W, Xiang S, Zhang T, Han Y, Zhang Y, Guo X, Yu L, Hao Y. S4-KD: A single step spiking SiamFC+ + for object tracking with knowledge distillation. Neural Netw 2025; 188:107478. [PMID: 40239239 DOI: 10.1016/j.neunet.2025.107478] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Revised: 03/26/2025] [Accepted: 04/08/2025] [Indexed: 04/18/2025]
Abstract
Spiking neural networks (SNNs), which transmit information through binary spikes, have the advantages of high efficiency and low energy consumption. At present, the multiple time steps of SNNs can lead to increased latency and power consumption. To this end, we propose Single Step Spiking SiamFC+ + (S4), an improved single-step end-to-end direct training target tracking framework that compresses the time step to 1 by temporal pruning, using AlexNet as the backbone network. Experimental results show that, even when only a single time step is used, the tracking performance of the proposed S4 is still comparable to the original Spiking SiamFC+ +. Furthermore, we introduce the knowledge distillation to improve the performance of the proposed S4, which is called S4-KD for clarity. Three kinds of distillation loss functions are designed for the S4-KD. An artificial neural network model based on the AlexNet network serves as the teacher model, while the temporal-pruned S4 model acts as the student model for retraining. Experimental results show that the S4-KD tracker achieves higher performance on several tracking benchmarks. More specifically, on the OTB100 dataset, Precision and Success are 0.871 and 0.657 respectively, on the UAV123 dataset, Precision and Success are 0.766 and 0.603 respectively, and on the VOT2018 dataset, A, R, and EAO are 0.582, 0.370, and 0.278 respectively. In addition, the estimated energy consumption of the S4-KD is only 34.6 % of that of the original Spiking SiamFC+ +. To the best of our knowledge, the proposed S4-KD tracker surpasses all the existing SNN-based object tracking methods, achieving state-of-the-art performance. Our codes will be available at https://github.com/PSNN-xd/S4-KD.
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Affiliation(s)
- Wenzhuo Liu
- State Key Laboratory of Integrated Service Networks, Xidian University, Xi'an 710071, China
| | - Shuiying Xiang
- State Key Laboratory of Integrated Service Networks, Xidian University, Xi'an 710071, China; State Key Discipline Laboratory of Wide Bandgap Semiconductor Technology, School of Microelectronics, Xidian University, Xi'an 710071, China.
| | - Tao Zhang
- State Key Laboratory of Integrated Service Networks, Xidian University, Xi'an 710071, China
| | - Yanan Han
- State Key Laboratory of Integrated Service Networks, Xidian University, Xi'an 710071, China
| | - Yahui Zhang
- State Key Laboratory of Integrated Service Networks, Xidian University, Xi'an 710071, China
| | - Xingxing Guo
- State Key Laboratory of Integrated Service Networks, Xidian University, Xi'an 710071, China
| | - Licun Yu
- CCCC First Highway Consultants Co. Ltd., Xi'an 710075, China
| | - Yue Hao
- State Key Discipline Laboratory of Wide Bandgap Semiconductor Technology, School of Microelectronics, Xidian University, Xi'an 710071, China.
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2
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Turrini S, Fiori F, Arcara G, Romei V, di Pellegrino G, Avenanti A. State-dependent associative plasticity highlights function-specific premotor-motor pathways crucial for arbitrary visuomotor mapping. SCIENCE ADVANCES 2025; 11:eadu4098. [PMID: 40367165 PMCID: PMC12077503 DOI: 10.1126/sciadv.adu4098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/05/2024] [Accepted: 04/09/2025] [Indexed: 05/16/2025]
Abstract
Arbitrary visuomotor mapping (AVMM) showcases the brain's ability to link sensory inputs with actions. The ventral premotor cortex (PMv) is proposed as central to sensorimotor transformations, relaying descending motor commands through the primary motor cortex (M1). However, direct evidence of this pathway's involvement in AVMM remains elusive. In four experiments, we used cortico-cortical paired associative stimulation (ccPAS) to enhance (ccPASPMv-M1) or inhibit (ccPASM1-PMv) PMv-to-M1 connectivity via Hebbian plasticity. Leveraging state-dependent properties of transcranial magnetic stimulation, we targeted function-specific visuomotor neurons within the pathway, testing their physiological/behavioral relevance to AVMM. State-dependent ccPASPMv-M1, applied during motor responses to target visual cues, enhanced neurophysiological and behavioral indices of AVMM, while ccPASM1-PMv had an opposite influence, with the effects being more pronounced for target relative to control visual cues. These results highlight the plasticity and causal role of spatially overlapping but functionally specific neural populations within the PMv-M1 pathway in AVMM and suggest state-dependent ccPAS as a tool for targeted modulation of visuomotor pathways.
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Affiliation(s)
- Sonia Turrini
- Centro studi e ricerche in Neuroscienze Cognitive, Dipartimento di Psicologia “Renzo Canestrari,” Alma Mater Studiorum Università di Bologna Campus di Cesena, 47521 Cesena, Italy
| | - Francesca Fiori
- Centro studi e ricerche in Neuroscienze Cognitive, Dipartimento di Psicologia “Renzo Canestrari,” Alma Mater Studiorum Università di Bologna Campus di Cesena, 47521 Cesena, Italy
- NeXT: Neurophysiology and Neuroengineering of Human-Technology Interaction Research Unit, Campus Bio-Medico University, 00128 Rome, Italy
| | | | - Vincenzo Romei
- Centro studi e ricerche in Neuroscienze Cognitive, Dipartimento di Psicologia “Renzo Canestrari,” Alma Mater Studiorum Università di Bologna Campus di Cesena, 47521 Cesena, Italy
- Facultad de Lenguas y Educación, Universidad Antonio de Nebrija, Madrid 28015, Spain
| | - Giuseppe di Pellegrino
- Centro studi e ricerche in Neuroscienze Cognitive, Dipartimento di Psicologia “Renzo Canestrari,” Alma Mater Studiorum Università di Bologna Campus di Cesena, 47521 Cesena, Italy
| | - Alessio Avenanti
- Centro studi e ricerche in Neuroscienze Cognitive, Dipartimento di Psicologia “Renzo Canestrari,” Alma Mater Studiorum Università di Bologna Campus di Cesena, 47521 Cesena, Italy
- Centro de Investigación en Neuropsicología y Neurociencias Cognitivas, Universidad Católica del Maule, Talca, Chile
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3
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Li YZ, Gao L, Sun XL, Duan L, Jiang M, Wu QF. Neural cell competition sculpting brain from cradle to grave. Natl Sci Rev 2025; 12:nwaf057. [PMID: 40309342 PMCID: PMC12042753 DOI: 10.1093/nsr/nwaf057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2024] [Revised: 01/18/2025] [Accepted: 02/13/2025] [Indexed: 05/02/2025] Open
Abstract
Darwinian selection, operating within the cellular ecosystem of multicellular organisms, drives a pervasive surveillance mechanism of cell-cell competition that shapes tissue architecture and function. While cell competition eliminates suboptimal cells to ensure tissue integrity across various tissues, neuronal competition specifically sculpts neural networks to establish precise circuits for sensory, motor and cognitive functions. However, our understanding of cell competition across diverse neural cell types in both developmental and pathological contexts remains limited. Here, we review recent advances on the phenomenon, and mechanisms and potential functions of neural cell competition (NCC), ranging from neural progenitors, neurons, astrocytes and oligodendrocytes to microglia. Physiological NCC governs cellular survival, proliferation, arborization, organization, function and territorial colonization, whereas dysregulated NCC may cause neurodevelopmental disorders, accelerate aging, exacerbate neurodegenerative diseases and drive brain tumor progression. Future work that leverages cell competition mechanisms may help to improve cognition and curb diseases.
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Affiliation(s)
- Yu Zheng Li
- State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
| | - Lisen Gao
- State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 100101, China
| | - Xue-Lian Sun
- State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 100101, China
| | - Lihui Duan
- State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
| | - Man Jiang
- Department of Physiology, School of Basic Medicine and Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China
| | - Qing-Feng Wu
- State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 100101, China
- Beijing Key Laboratory for Genetics of Birth Defects, Beijing Children's Hospital, Beijing 100045, China
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4
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Jin F, Li M, Yang L, Yang L, Shang Z. Exploring value learning in pigeons: the role of dual pathways in the basal ganglia and synaptic plasticity. J Exp Biol 2025; 228:jeb249507. [PMID: 40241515 DOI: 10.1242/jeb.249507] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2024] [Accepted: 04/11/2025] [Indexed: 04/18/2025]
Abstract
Understanding value learning in animals is a key focus in cognitive neuroscience. Current models used in research are often simple, and while more complex models have been proposed, it remains unclear which assumptions align with actual value-learning strategies of animals. This study investigated the computational mechanisms behind value learning in pigeons using a free-choice task. Three models were constructed based on different assumptions about the role of the basal ganglia's dual pathways and synaptic plasticity in value computation, followed by model comparison and neural correlation analysis. Among the three models tested, the dual-pathway reinforcement learning model with Hebbian rules most closely matched the pigeons' behavior. Furthermore, the striatal gamma band connectivity showed the highest correlation with the values estimated by this model. Additionally, enhanced beta band connectivity in the nidopallium caudolaterale supported value learning. This study provides valuable insights into reinforcement learning mechanisms in non-human animals.
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Affiliation(s)
- Fuli Jin
- Zhengzhou University, School of Electrical and Information Engineering, Zhengzhou 450001, China
- Henan Key Laboratory of Brain Science and Brain-Computer Interface Technology, Zhengzhou 450001, China
| | - Mengmeng Li
- Zhengzhou University, School of Electrical and Information Engineering, Zhengzhou 450001, China
- Henan Key Laboratory of Brain Science and Brain-Computer Interface Technology, Zhengzhou 450001, China
| | - Long Yang
- Zhengzhou University, School of Electrical and Information Engineering, Zhengzhou 450001, China
- Henan Key Laboratory of Brain Science and Brain-Computer Interface Technology, Zhengzhou 450001, China
| | - Lifang Yang
- Zhengzhou University, School of Electrical and Information Engineering, Zhengzhou 450001, China
- Henan Key Laboratory of Brain Science and Brain-Computer Interface Technology, Zhengzhou 450001, China
| | - Zhigang Shang
- Zhengzhou University, School of Electrical and Information Engineering, Zhengzhou 450001, China
- Henan Key Laboratory of Brain Science and Brain-Computer Interface Technology, Zhengzhou 450001, China
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5
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Madar AD, Jiang A, Dong C, Sheffield MEJ. Synaptic plasticity rules driving representational shifting in the hippocampus. Nat Neurosci 2025; 28:848-860. [PMID: 40113934 DOI: 10.1038/s41593-025-01894-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Accepted: 01/17/2025] [Indexed: 03/22/2025]
Abstract
Synaptic plasticity is widely thought to support memory storage in the brain, but the rules determining impactful synaptic changes in vivo are not known. We considered the trial-by-trial shifting dynamics of hippocampal place fields (PF) as an indicator of ongoing plasticity during memory formation and familiarization. By implementing different plasticity rules in computational models of spiking place cells and comparing them to experimentally measured PFs from mice navigating familiar and new environments, we found that behavioral timescale synaptic plasticity (BTSP), rather than Hebbian spike-timing-dependent plasticity (STDP), best explains PF shifting dynamics. BTSP-triggering events are rare, but more frequent during new experiences. During exploration, their probability is dynamic-it decays after PF onset, but continually drives a population-level representational drift. Additionally, our results show that BTSP occurs in CA3 but is less frequent and phenomenologically different than in CA1. Overall, our study provides a new framework to understand how synaptic plasticity continuously shapes neuronal representations during learning.
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Affiliation(s)
- Antoine D Madar
- Department of Neurobiology, Neuroscience Institute, University of Chicago, Chicago, IL, USA.
| | - Anqi Jiang
- Department of Neurobiology, Neuroscience Institute, University of Chicago, Chicago, IL, USA
| | - Can Dong
- Department of Neurobiology, Neuroscience Institute, University of Chicago, Chicago, IL, USA
- Department of Neurobiology, Stanford University School of Medicine, Stanford, CA, USA
| | - Mark E J Sheffield
- Department of Neurobiology, Neuroscience Institute, University of Chicago, Chicago, IL, USA.
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6
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Bergoin R, Torcini A, Deco G, Quoy M, Zamora-López G. Emergence and maintenance of modularity in neural networks with Hebbian and anti-Hebbian inhibitory STDP. PLoS Comput Biol 2025; 21:e1012973. [PMID: 40262082 PMCID: PMC12054933 DOI: 10.1371/journal.pcbi.1012973] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2024] [Revised: 05/06/2025] [Accepted: 03/19/2025] [Indexed: 04/24/2025] Open
Abstract
The modular and hierarchical organization of the brain is believed to support the coexistence of segregated (specialization) and integrated (binding) information processes. A relevant question is yet to understand how such architecture naturally emerges and is sustained over time, given the plastic nature of the brain's wiring. Following evidences that the sensory cortices organize into assemblies under selective stimuli, it has been shown that stable neuronal assemblies can emerge due to targeted stimulation, embedding various forms of synaptic plasticity in presence of homeostatic and/or control mechanisms. Here, we show that simple spike-timing-dependent plasticity (STDP) rules, based only on pre- and post-synaptic spike times, can also lead to the stable encoding of memories in the absence of any control mechanism. We develop a model of spiking neurons, trained by stimuli targeting different sub-populations. The model satisfies some biologically plausible features: (i) it contains excitatory and inhibitory neurons with Hebbian and anti-Hebbian STDP; (ii) neither the neuronal activity nor the synaptic weights are frozen after the learning phase. Instead, the neurons are allowed to fire spontaneously while synaptic plasticity remains active. We find that only the combination of two inhibitory STDP sub-populations allows for the formation of stable modules in the network, with each sub-population playing a distinctive role. The Hebbian sub-population controls for the firing activity, while the anti-Hebbian neurons promote pattern selectivity. After the learning phase, the network settles into an asynchronous irregular resting-state. This post-learning activity is associated with spontaneous memory recalls which turn out to be fundamental for the long-term consolidation of the learned memories. Due to its simplicity, the introduced model can represent a test-bed for further investigations on the role played by STDP on memory storing and maintenance.
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Affiliation(s)
- Raphaël Bergoin
- ETIS, UMR 8051, ENSEA, CY Cergy Paris Université, CNRS, Cergy-Pontoise, France
- Center for Brain and Cognition, Pompeu Fabra University, Barcelona, Spain
- Department of Information and Communication Technologies, Pompeu Fabra University, Barcelona, Spain
- Institute of Neural Information Processing, Center for Molecular Neurobiology (ZMNH), University Medical Center Hamburg-Eppendorf (UKE), Hamburg, Germany
| | - Alessandro Torcini
- Laboratoire de Physique Théorique et Modélisation, UMR 8089, CY Cergy Paris Université, CNRS, Cergy-Pontoise, France
| | - Gustavo Deco
- Center for Brain and Cognition, Pompeu Fabra University, Barcelona, Spain
- Department of Information and Communication Technologies, Pompeu Fabra University, Barcelona, Spain
- Instituciò Catalana de Recerca i Estudis Avançats (ICREA), Barcelona, Spain
| | - Mathias Quoy
- ETIS, UMR 8051, ENSEA, CY Cergy Paris Université, CNRS, Cergy-Pontoise, France
- IPAL, CNRS, Singapore, Singapore
| | - Gorka Zamora-López
- Center for Brain and Cognition, Pompeu Fabra University, Barcelona, Spain
- Department of Information and Communication Technologies, Pompeu Fabra University, Barcelona, Spain
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7
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Fruengel R, Oberlaender M. Sparse connectivity enables efficient information processing in cortex-like artificial neural networks. Front Neural Circuits 2025; 19:1528309. [PMID: 40182663 PMCID: PMC11966417 DOI: 10.3389/fncir.2025.1528309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2024] [Accepted: 03/03/2025] [Indexed: 04/05/2025] Open
Abstract
Neurons in cortical networks are very sparsely connected; even neurons whose axons and dendrites overlap are highly unlikely to form a synaptic connection. What is the relevance of such sparse connectivity for a network's function? Surprisingly, it has been shown that sparse connectivity impairs information processing in artificial neural networks (ANNs). Does this imply that sparse connectivity also impairs information processing in biological neural networks? Although ANNs were originally inspired by the brain, conventional ANNs differ substantially in their structural network architecture from cortical networks. To disentangle the relevance of these structural properties for information processing in networks, we systematically constructed ANNs constrained by interpretable features of cortical networks. We find that in large and recurrently connected networks, as are found in the cortex, sparse connectivity facilitates time- and data-efficient information processing. We explore the origins of these surprising findings and show that conventional dense ANNs distribute information across only a very small fraction of nodes, whereas sparse ANNs distribute information across more nodes. We show that sparsity is most critical in networks with fixed excitatory and inhibitory nodes, mirroring neuronal cell types in cortex. This constraint causes a large learning delay in densely connected networks which is eliminated by sparse connectivity. Taken together, our findings show that sparse connectivity enables efficient information processing given key constraints from cortical networks, setting the stage for further investigation into higher-order features of cortical connectivity.
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Affiliation(s)
- Rieke Fruengel
- In Silico Brain Sciences Group, Max Planck Institute for Neurobiology of Behavior-caesar, Bonn, Germany
- International Max Planck Research School (IMPRS) for Brain and Behavior, Bonn, Germany
| | - Marcel Oberlaender
- In Silico Brain Sciences Group, Max Planck Institute for Neurobiology of Behavior-caesar, Bonn, Germany
- Center for Neurogenomics and Cognitive Research, Department of Integrative Neurophysiology, VU Amsterdam, Amsterdam, Netherlands
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8
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Falk MJ, Strupp AT, Scellier B, Murugan A. Temporal Contrastive Learning through implicit non-equilibrium memory. Nat Commun 2025; 16:2163. [PMID: 40038254 PMCID: PMC11880436 DOI: 10.1038/s41467-025-57043-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Accepted: 02/10/2025] [Indexed: 03/06/2025] Open
Abstract
The backpropagation method has enabled transformative uses of neural networks. Alternatively, for energy-based models, local learning methods involving only nearby neurons offer benefits in terms of decentralized training, and allow for the possibility of learning in computationally-constrained substrates. One class of local learning methods contrasts the desired, clamped behavior with spontaneous, free behavior. However, directly contrasting free and clamped behaviors requires explicit memory. Here, we introduce 'Temporal Contrastive Learning', an approach that uses integral feedback in each learning degree of freedom to provide a simple form of implicit non-equilibrium memory. During training, free and clamped behaviors are shown in a sawtooth-like protocol over time. When combined with integral feedback dynamics, these alternating temporal protocols generate an implicit memory necessary for comparing free and clamped behaviors, broadening the range of physical and biological systems capable of contrastive learning. Finally, we show that non-equilibrium dissipation improves learning quality and determine a Landauer-like energy cost of contrastive learning through physical dynamics.
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Affiliation(s)
- Martin J Falk
- Department of Physics, University of Chicago, Chicago, IL, USA
| | - Adam T Strupp
- Department of Physics, University of Chicago, Chicago, IL, USA
| | | | - Arvind Murugan
- Department of Physics, University of Chicago, Chicago, IL, USA.
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9
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Pang R, Recanatesi S. A non-Hebbian code for episodic memory. SCIENCE ADVANCES 2025; 11:eado4112. [PMID: 39982994 PMCID: PMC11844740 DOI: 10.1126/sciadv.ado4112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Accepted: 01/22/2025] [Indexed: 02/23/2025]
Abstract
Hebbian plasticity has long dominated neurobiological models of memory formation. Yet, plasticity rules operating on one-shot episodic memory timescales rarely depend on both pre- and postsynaptic spiking, challenging Hebbian theory in this crucial regime. Here, we present an episodic memory model governed by a simpler rule depending only on presynaptic activity. We show that this rule, capitalizing on high-dimensional neural activity with restricted transitions, naturally stores episodes as paths through complex state spaces like those underlying a world model. The resulting memory traces, which we term path vectors, are highly expressive and decodable with an odor-tracking algorithm. We show that path vectors are robust alternatives to Hebbian traces, support one-shot sequential and associative recall, along with policy learning, and shed light on specific hippocampal plasticity rules. Thus, non-Hebbian plasticity is sufficient for flexible memory and learning and well-suited to encode episodes and policies as paths through a world model.
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Affiliation(s)
- Rich Pang
- Center for the Physics of Biological Function, Princeton, NJ and New York, NY, USA
- Princeton Neuroscience Institute, Princeton, NJ, USA
| | - Stefano Recanatesi
- Allen Institute for Neural Dynamics, Seattle, WA, USA
- Technion–Israel Institute of Technology, Haifa, Israel
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10
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Wang Z, Wang L, Gao F, Dai Y, Liu C, Wu J, Wang M, Yan Q, Chen Y, Wang C, Wang L. Exploring cerebellar transcranial magnetic stimulation in post-stroke limb dysfunction rehabilitation: a narrative review. Front Neurosci 2025; 19:1405637. [PMID: 39963260 PMCID: PMC11830664 DOI: 10.3389/fnins.2025.1405637] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2024] [Accepted: 01/13/2025] [Indexed: 02/20/2025] Open
Abstract
This review delves into the emerging field of cerebellar Transcranial Magnetic Stimulation (TMS) in the rehabilitation of limb dysfunction following a stroke. It synthesizes findings from randomized controlled trials and case studies, examining the efficacy, safety, and underlying mechanisms of cerebellar TMS. The review outlines advancements in TMS technologies, such as low-frequency repetitive TMS, intermittent Theta Burst Stimulation, and Cerebello-Motor Paired Associative Stimulation, and their integration with physiotherapy. The role of the cerebellum in motor control, the theoretical underpinnings of cerebellar stimulation on motor cortex excitability, and the indirect effects on cognition and motor learning are explored. Additionally, the review discusses current challenges, including coil types, safety, and optimal timing and modes of stimulation, and suggests future research directions. This comprehensive analysis highlights cerebellar TMS as a promising, though complex, approach in stroke rehabilitation, offering insights for its clinical optimization.
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Affiliation(s)
- Zhan Wang
- Rehabilitation Medicine Department, The Second Hospital of Dalian Medical University, Dalian, China
| | - Likai Wang
- Rehabilitation Center, Qilu Hospital of Shandong University, Jinan, China
| | - Fei Gao
- Rehabilitation Medicine Department, The Second Hospital of Dalian Medical University, Dalian, China
| | - Yongli Dai
- Rehabilitation Medicine Department, The Second Hospital of Dalian Medical University, Dalian, China
| | - Chunqiao Liu
- Department of Neurology, Dalian Municipal Central Hospital, Dalian, China
| | - Jingyi Wu
- Rehabilitation Medicine Department, The Second Hospital of Dalian Medical University, Dalian, China
| | - Mengchun Wang
- Rehabilitation Medicine Department, The Second Hospital of Dalian Medical University, Dalian, China
| | - Qinjie Yan
- Rehabilitation Medicine Department, The Second Hospital of Dalian Medical University, Dalian, China
| | - Yaning Chen
- Rehabilitation Medicine Department, The Second Hospital of Dalian Medical University, Dalian, China
| | - Chengbin Wang
- Rehabilitation Medicine Department, The Second Hospital of Dalian Medical University, Dalian, China
| | - Litong Wang
- Rehabilitation Medicine Department, The Second Hospital of Dalian Medical University, Dalian, China
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11
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Zheng J, Meister M. The unbearable slowness of being: Why do we live at 10 bits/s? Neuron 2025; 113:192-204. [PMID: 39694032 PMCID: PMC11758279 DOI: 10.1016/j.neuron.2024.11.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2024] [Revised: 10/31/2024] [Accepted: 11/12/2024] [Indexed: 12/20/2024]
Abstract
This article is about the neural conundrum behind the slowness of human behavior. The information throughput of a human being is about 10 bits/s. In comparison, our sensory systems gather data at ∼109 bits/s. The stark contrast between these numbers remains unexplained and touches on fundamental aspects of brain function: what neural substrate sets this speed limit on the pace of our existence? Why does the brain need billions of neurons to process 10 bits/s? Why can we only think about one thing at a time? The brain seems to operate in two distinct modes: the "outer" brain handles fast high-dimensional sensory and motor signals, whereas the "inner" brain processes the reduced few bits needed to control behavior. Plausible explanations exist for the large neuron numbers in the outer brain, but not for the inner brain, and we propose new research directions to remedy this.
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Affiliation(s)
- Jieyu Zheng
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.
| | - Markus Meister
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.
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12
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Pierce AF, Shupe L, Fetz E, Yazdan-Shahmorad A. Flexible modeling of large-scale neural network stimulation: electrical and optical extensions to The Virtual Electrode Recording Tool for EXtracellular Potentials (VERTEX). BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2024.08.20.608687. [PMID: 39229104 PMCID: PMC11370401 DOI: 10.1101/2024.08.20.608687] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 09/05/2024]
Abstract
Background Computational models that predict effects of neural stimulation can be used as a preliminary tool to inform in-vivo research, reducing the costs, time, and ethical considerations involved. However, current models do not support the diverse neural stimulation techniques used in-vivo, including the expanding selection of electrodes, stimulation modalities, and stimulation paradigms. New Method To develop a more comprehensive software, we created several extensions to The Virtual Electrode Recording Tool for EXtracellular Potentials (VERTEX), the MATLAB-based neural stimulation tool from Newcastle University. VERTEX simulates input currents in a large population of multi-compartment neurons within a small cortical slice to model electric field stimulation, while recording local field potentials (LFPs) and spiking activity. Our extensions to its existing electric field stimulation framework include allowing multiple pairs of parametrically defined electrodes and biphasic, bipolar stimulation delivered at programmable delays. To support the growing use of optogenetic approaches for targeted neural stimulation, we introduced a feature that models optogenetic stimulation through an additional VERTEX input function that converts irradiance to currents at optogenetically responsive neurons. Finally, we added extensions to allow complex stimulation protocols including paired-pulse, spatiotemporal patterned, and closed-loop stimulation. Results We demonstrated our novel features using VERTEX's built-in functionalities, with results in alignment with other models and experimental work. Conclusions Our extensions provide an all in one platform to efficiently and systematically test diverse, targeted, and individualized stimulation patterns.
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Affiliation(s)
- Anne F Pierce
- Department of Bioengineering, University of Washington, Seattle, WA 98195, USA
- Washington National Primate Research Center, Seattle, WA 98195, USA
| | - Larry Shupe
- Department of Physiology and Biophysics, University of Washington, Seattle WA 98195, USA
| | - Eberhard Fetz
- Washington National Primate Research Center, Seattle, WA 98195, USA
- Department of Physiology and Biophysics, University of Washington, Seattle WA 98195, USA
| | - Azadeh Yazdan-Shahmorad
- Department of Bioengineering, University of Washington, Seattle, WA 98195, USA
- Washington National Primate Research Center, Seattle, WA 98195, USA
- Department of Electrical and Computer Engineering, University of Washington, Seattle, WA 98195, USA
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13
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Lee C, Park Y, Yoon S, Lee J, Cho Y, Park C. Brain-inspired learning rules for spiking neural network-based control: a tutorial. Biomed Eng Lett 2025; 15:37-55. [PMID: 39781065 PMCID: PMC11704115 DOI: 10.1007/s13534-024-00436-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Revised: 09/24/2024] [Accepted: 09/28/2024] [Indexed: 01/12/2025] Open
Abstract
Robotic systems rely on spatio-temporal information to solve control tasks. With advancements in deep neural networks, reinforcement learning has significantly enhanced the performance of control tasks by leveraging deep learning techniques. However, as deep neural networks grow in complexity, they consume more energy and introduce greater latency. This complexity hampers their application in robotic systems that require real-time data processing. To address this issue, spiking neural networks, which emulate the biological brain by transmitting spatio-temporal information through spikes, have been developed alongside neuromorphic hardware that supports their operation. This paper reviews brain-inspired learning rules and examines the application of spiking neural networks in control tasks. We begin by exploring the features and implementations of biologically plausible spike-timing-dependent plasticity. Subsequently, we investigate the integration of a global third factor with spike-timing-dependent plasticity and its utilization and enhancements in both theoretical and applied research. We also discuss a method for locally applying a third factor that sophisticatedly modifies each synaptic weight through weight-based backpropagation. Finally, we review studies utilizing these learning rules to solve control tasks using spiking neural networks.
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Affiliation(s)
- Choongseop Lee
- Department of Computer Engineering, Kwangwoon University, Seoul, 01897 Republic of Korea
| | - Yuntae Park
- Department of Computer Engineering, Kwangwoon University, Seoul, 01897 Republic of Korea
| | - Sungmin Yoon
- Department of Computer Engineering, Kwangwoon University, Seoul, 01897 Republic of Korea
| | - Jiwoon Lee
- Department of Computer Engineering, Kwangwoon University, Seoul, 01897 Republic of Korea
| | - Youngho Cho
- Department of Electrical and Communication Engineering, Daelim University College, Anyang, 13916 Republic of Korea
| | - Cheolsoo Park
- Department of Computer Engineering, Kwangwoon University, Seoul, 01897 Republic of Korea
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14
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Haxel L, Ahola O, Belardinelli P, Ermolova M, Humaidan D, Macke JH, Ziemann U. Decoding Motor Excitability in TMS using EEG-Features: An Exploratory Machine Learning Approach. IEEE Trans Neural Syst Rehabil Eng 2024; PP:103-112. [PMID: 40030511 DOI: 10.1109/tnsre.2024.3516393] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/05/2025]
Abstract
Brain state-dependent transcranial magnetic stimulation (TMS) holds promise for enhancing neuromodulatory effects by synchronizing stimulation with specific features of cortical oscillations derived from real-time electroencephalography (EEG). However, conventional approaches rely on open-loop systems with static stimulation parameters, assuming that pre-determined EEG features universally indicate high or low excitability states. This one-size-fits-all approach overlooks individual neurophysiological differences and the dynamic nature of brain states, potentially compromising therapeutic efficacy. We present a supervised machine learning framework that predicts individual motor excitability states from pre-stimulus EEG features. Our approach combines established biomarkers with a comprehensive set of spectral and connectivity measures, implementing multi-scale feature selection within a nested cross-validation scheme. Validation across multiple classifiers, feature sets, and experimental protocols in 50 healthy participants demonstrated a mean prediction accuracy of 71 ± 7%. Hierarchical clustering of top predictive EEG features revealed two distinct participant subgroups. The first subgroup, comprising approximately 50% of participants, showed predictive features predominantly in alpha and low-beta bands in sensorimotor regions of the stimulated hemisphere, aligning with traditional associations of motor excitability and the sensorimotor μ-rhythm. The second subgroup exhibited predictive features primarily in low and high gamma bands in parietal regions, suggesting that motor excitability is influenced by broader neural dynamics for these individuals. Our data-driven framework effectively identifies personalized motor excitability biomarkers, holding promise to optimize TMS interventions in clinical and research settings. Additionally, our approach provides a versatile platform for biomarker discovery and validation across diverse neuromodulation paradigms and brain signal classification tasks.
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15
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Garagnani M. On the ability of standard and brain-constrained deep neural networks to support cognitive superposition: a position paper. Cogn Neurodyn 2024; 18:3383-3400. [PMID: 39712129 PMCID: PMC11655761 DOI: 10.1007/s11571-023-10061-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 12/08/2023] [Accepted: 12/18/2023] [Indexed: 12/24/2024] Open
Abstract
The ability to coactivate (or "superpose") multiple conceptual representations is a fundamental function that we constantly rely upon; this is crucial in complex cognitive tasks requiring multi-item working memory, such as mental arithmetic, abstract reasoning, and language comprehension. As such, an artificial system aspiring to implement any of these aspects of general intelligence should be able to support this operation. I argue here that standard, feed-forward deep neural networks (DNNs) are unable to implement this function, whereas an alternative, fully brain-constrained class of neural architectures spontaneously exhibits it. On the basis of novel simulations, this proof-of-concept article shows that deep, brain-like networks trained with biologically realistic Hebbian learning mechanisms display the spontaneous emergence of internal circuits (cell assemblies) having features that make them natural candidates for supporting superposition. Building on previous computational modelling results, I also argue that, and offer an explanation as to why, in contrast, modern DNNs trained with gradient descent are generally unable to co-activate their internal representations. While deep brain-constrained neural architectures spontaneously develop the ability to support superposition as a result of (1) neurophysiologically accurate learning and (2) cortically realistic between-area connections, backpropagation-trained DNNs appear to be unsuited to implement this basic cognitive operation, arguably necessary for abstract thinking and general intelligence. The implications of this observation are briefly discussed in the larger context of existing and future artificial intelligence systems and neuro-realistic computational models.
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Affiliation(s)
- Max Garagnani
- Department of Computing, Goldsmiths – University of London, London, UK
- Brain Language Laboratory, Department of Philosophy and Humanities, Freie Universität Berlin, Berlin, Germany
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16
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Zheng J, Yebra M, Schjetnan AGP, Patel K, Katz CN, Kyzar M, Mosher CP, Kalia SK, Chung JM, Reed CM, Valiante TA, Mamelak AN, Kreiman G, Rutishauser U. Theta phase precession supports memory formation and retrieval of naturalistic experience in humans. Nat Hum Behav 2024; 8:2423-2436. [PMID: 39363119 DOI: 10.1038/s41562-024-01983-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Accepted: 08/13/2024] [Indexed: 10/05/2024]
Abstract
Associating different aspects of experience with discrete events is critical for human memory. A potential mechanism for linking memory components is phase precession, during which neurons fire progressively earlier in time relative to theta oscillations. However, no direct link between phase precession and memory has been established. Here we recorded single-neuron activity and local field potentials in the human medial temporal lobe while participants (n = 22) encoded and retrieved memories of movie clips. Bouts of theta and phase precession occurred following cognitive boundaries during movie watching and following stimulus onsets during memory retrieval. Phase precession was dynamic, with different neurons exhibiting precession in different task periods. Phase precession strength provided information about memory encoding and retrieval success that was complementary with firing rates. These data provide direct neural evidence for a functional role of phase precession in human episodic memory.
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Affiliation(s)
- Jie Zheng
- Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA, USA
- Department of Neurological Surgery, University of California, Davis, Davis, CA, USA
- Department of Biomedical Engineering, University of California, Davis, Davis, CA, USA
- Department of Ophthalmology, Children's Hospital, Harvard Medical School, Boston, MA, USA
| | - Mar Yebra
- Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Andrea G P Schjetnan
- Krembil Research Institute and Division of Neurosurgery, University Health Network, University of Toronto, Toronto, Ontario, Canada
| | - Kramay Patel
- Institute of Biomedical Engineering, University of Toronto, Toronto, Ontario, Canada
| | - Chaim N Katz
- Institute of Biomedical Engineering, University of Toronto, Toronto, Ontario, Canada
| | - Michael Kyzar
- Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Clayton P Mosher
- Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Suneil K Kalia
- Krembil Research Institute and Division of Neurosurgery, University Health Network, University of Toronto, Toronto, Ontario, Canada
| | - Jeffrey M Chung
- Department of Neurology, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Chrystal M Reed
- Department of Neurology, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Taufik A Valiante
- Krembil Research Institute and Division of Neurosurgery, University Health Network, University of Toronto, Toronto, Ontario, Canada
| | - Adam N Mamelak
- Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Gabriel Kreiman
- Department of Ophthalmology, Children's Hospital, Harvard Medical School, Boston, MA, USA.
- Center for Brain Science, Harvard University, Cambridge, MA, USA.
| | - Ueli Rutishauser
- Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
- Department of Neurology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
- Center for Neural Science and Medicine, Department of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.
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17
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Keysers C, Silani G, Gazzola V. Predictive coding for the actions and emotions of others and its deficits in autism spectrum disorders. Neurosci Biobehav Rev 2024; 167:105877. [PMID: 39260714 DOI: 10.1016/j.neubiorev.2024.105877] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2024] [Revised: 08/22/2024] [Accepted: 09/05/2024] [Indexed: 09/13/2024]
Abstract
Traditionally, the neural basis of social perception has been studied by showing participants brief examples of the actions or emotions of others presented in randomized order to prevent participants from anticipating what others do and feel. This approach is optimal to isolate the importance of information flow from lower to higher cortical areas. The degree to which feedback connections and Bayesian hierarchical predictive coding contribute to how mammals process more complex social stimuli has been less explored, and will be the focus of this review. We illustrate paradigms that start to capture how participants predict the actions and emotions of others under more ecological conditions, and discuss the brain activity measurement methods suitable to reveal the importance of feedback connections in these predictions. Together, these efforts draw a richer picture of social cognition in which predictive coding and feedback connections play significant roles. We further discuss how the notion of predicting coding is influencing how we think of autism spectrum disorder.
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Affiliation(s)
- Christian Keysers
- Social Brain Lab, Netherlands Institute for Neuroscience, Royal Netherlands Academy of Art and Sciences, Meibergdreef 47, Amsterdam 1105 BA, the Netherlands; Department of Psychology, University of Amsterdam, Amsterdam, the Netherlands.
| | - Giorgia Silani
- Department of Clinical and Health Psychology, University of Vienna, Wien, Austria
| | - Valeria Gazzola
- Social Brain Lab, Netherlands Institute for Neuroscience, Royal Netherlands Academy of Art and Sciences, Meibergdreef 47, Amsterdam 1105 BA, the Netherlands; Department of Psychology, University of Amsterdam, Amsterdam, the Netherlands
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18
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Di Luzio P, Brady L, Turrini S, Romei V, Avenanti A, Sel A. Investigating the effects of cortico-cortical paired associative stimulation in the human brain: A systematic review and meta-analysis. Neurosci Biobehav Rev 2024; 167:105933. [PMID: 39481669 DOI: 10.1016/j.neubiorev.2024.105933] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2024] [Revised: 09/26/2024] [Accepted: 10/25/2024] [Indexed: 11/02/2024]
Abstract
Recent decades have witnessed a rapid development of novel neuromodulation techniques that allow direct manipulation of cortical pathways in the human brain. These techniques, known as cortico-cortical paired stimulation (ccPAS), apply magnetic stimulation over two cortical regions altering interregional connectivity. This review evaluates ccPAS's effectiveness to induce plastic changes in cortical pathways in the healthy brain. A systematic database search identified 41 studies investigating the effect of ccPAS on neurophysiological or behavioural measures, and a subsequent multilevel meta-analysis focused on the standardized mean differences to assess ccPAS's efficacy. Most studies report significant neurophysiological and behavioural changes from ccPAS interventions across several brain networks, consistently showing medium effect sizes. Moderator analyses revealed limited influence of experimental manipulations on effect sizes. The multivariate approach and lack of small-study bias suggest reliable effect estimates. ccPAS is a promising tool to manipulate neuroplasticity in cortical pathways, showing reliable effects on brain cortical networks. Important areas for further research on the influence of experimental procedures and the potential of ccPAS for clinical interventions are highlighted.
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Affiliation(s)
- Paolo Di Luzio
- Centre for Brain Science, Department of Psychology, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, UK; Essex ESNEFT Psychological Research Unit for Behaviour, Health and Wellbeing, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, UK.
| | - Laura Brady
- Centre for Brain Science, Department of Psychology, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, UK
| | - Sonia Turrini
- Centro studi e ricerche in Neuroscienze Cognitive, Dipartimento di Psicologia "Renzo Canestrari", Alma Mater Studiorum-Università di Bologna, Campus di Cesena, Via Rasi e Spinelli 176, Cesena 47521, Italy
| | - Vincenzo Romei
- Centro studi e ricerche in Neuroscienze Cognitive, Dipartimento di Psicologia "Renzo Canestrari", Alma Mater Studiorum-Università di Bologna, Campus di Cesena, Via Rasi e Spinelli 176, Cesena 47521, Italy; Facultad de Lenguas y Educación, Universidad Antonio de Nebrija, Madrid 28015, Spain
| | - Alessio Avenanti
- Centro studi e ricerche in Neuroscienze Cognitive, Dipartimento di Psicologia "Renzo Canestrari", Alma Mater Studiorum-Università di Bologna, Campus di Cesena, Via Rasi e Spinelli 176, Cesena 47521, Italy; Centro de Investigación en Neuropsicología y Neurociencias Cognitivas, Universidad Católica del Maule, Talca 3460000, Chile
| | - Alejandra Sel
- Centre for Brain Science, Department of Psychology, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, UK; Essex ESNEFT Psychological Research Unit for Behaviour, Health and Wellbeing, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, UK
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19
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Comai S, De Martin S, Mattarei A, Guidetti C, Pappagallo M, Folli F, Alimonti A, Manfredi PL. N-methyl-D-aspartate Receptors and Depression: Linking Psychopharmacology, Pathology and Physiology in a Unifying Hypothesis for the Epigenetic Code of Neural Plasticity. Pharmaceuticals (Basel) 2024; 17:1618. [PMID: 39770460 PMCID: PMC11728621 DOI: 10.3390/ph17121618] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2024] [Revised: 11/03/2024] [Accepted: 11/25/2024] [Indexed: 01/16/2025] Open
Abstract
Uncompetitive NMDAR (N-methyl-D-aspartate receptor) antagonists restore impaired neural plasticity, reverse depressive-like behavior in animal models, and relieve major depressive disorder (MDD) in humans. This review integrates recent findings from in silico, in vitro, in vivo, and human studies of uncompetitive NMDAR antagonists into the extensive body of knowledge on NMDARs and neural plasticity. Uncompetitive NMDAR antagonists are activity-dependent channel blockers that preferentially target hyperactive GluN2D subtypes because these subtypes are most sensitive to activation by low concentrations of extracellular glutamate and are more likely activated by certain pathological agonists and allosteric modulators. Hyperactivity of GluN2D subtypes in specific neural circuits may underlie the pathophysiology of MDD. We hypothesize that neural plasticity is epigenetically regulated by precise Ca2+ quanta entering cells via NMDARs. Stimuli reach receptor cells (specialized cells that detect specific types of stimuli and convert them into electrical signals) and change their membrane potential, regulating glutamate release in the synaptic cleft. Free glutamate binds ionotropic glutamatergic receptors regulating NMDAR-mediated Ca2+ influx. Quanta of Ca2+ via NMDARs activate enzymatic pathways, epigenetically regulating synaptic protein homeostasis and synaptic receptor expression; thereby, Ca2+ quanta via NMDARs control the balance between long-term potentiation and long-term depression. This NMDAR Ca2+ quantal hypothesis for the epigenetic code of neural plasticity integrates recent psychopharmacology findings into established physiological and pathological mechanisms of brain function.
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Affiliation(s)
- Stefano Comai
- Department of Pharmaceutical and Pharmacological Sciences, University of Padua, 35121 Padua, Italy; (S.C.); (S.D.M.); (A.M.)
- Department of Biomedical Sciences, University of Padua, 35121 Padua, Italy
- Department of Psychiatry, McGill University, Montreal, QC H3A 1A1, Canada
- IRCSS San Raffaele Scientific Institute, 20132 Milan, Italy
| | - Sara De Martin
- Department of Pharmaceutical and Pharmacological Sciences, University of Padua, 35121 Padua, Italy; (S.C.); (S.D.M.); (A.M.)
| | - Andrea Mattarei
- Department of Pharmaceutical and Pharmacological Sciences, University of Padua, 35121 Padua, Italy; (S.C.); (S.D.M.); (A.M.)
| | - Clotilde Guidetti
- Child Neuropsychiatry Unit, Department of Neuroscience, IRCCS Bambino Gesù Pediatric Hospital, 00165 Rome, Italy;
- Department of Psychiatry, Harvard Medical School, Boston, MA 02115, USA
| | - Marco Pappagallo
- Relmada Therapeutics, Inc., Coral Gables, FL 33134, USA;
- MGGM LLC, 85 Baker Road, Kerhonkson, NY 12446, USA
| | - Franco Folli
- Department of Health Sciences, University of Milan, 20141 Milan, Italy;
| | - Andrea Alimonti
- The Institute of Oncology Research, Università della Svizzera Italiana, 6500 Bellinzona, Switzerland;
- Veneto Institute of Molecular Medicine, 35129 Padua, Italy
- Department of Medicine, Zurich University, 8006 Zurich, Switzerland
- Department of Medicine, University of Padua, 35122 Padua, Italy
| | - Paolo L. Manfredi
- Relmada Therapeutics, Inc., Coral Gables, FL 33134, USA;
- MGGM LLC, 85 Baker Road, Kerhonkson, NY 12446, USA
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20
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Cattani A, Arnold DB, McCarthy M, Kopell N. Basolateral amygdala oscillations enable fear learning in a biophysical model. eLife 2024; 12:RP89519. [PMID: 39590510 PMCID: PMC11594530 DOI: 10.7554/elife.89519] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2024] Open
Abstract
The basolateral amygdala (BLA) is a key site where fear learning takes place through synaptic plasticity. Rodent research shows prominent low theta (~3-6 Hz), high theta (~6-12 Hz), and gamma (>30 Hz) rhythms in the BLA local field potential recordings. However, it is not understood what role these rhythms play in supporting the plasticity. Here, we create a biophysically detailed model of the BLA circuit to show that several classes of interneurons (PV, SOM, and VIP) in the BLA can be critically involved in producing the rhythms; these rhythms promote the formation of a dedicated fear circuit shaped through spike-timing-dependent plasticity. Each class of interneurons is necessary for the plasticity. We find that the low theta rhythm is a biomarker of successful fear conditioning. The model makes use of interneurons commonly found in the cortex and, hence, may apply to a wide variety of associative learning situations.
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Affiliation(s)
- Anna Cattani
- Department of Mathematics and Statistics, Boston UniversityBostonUnited States
| | - Don B Arnold
- Department of Biology, University of Southern CaliforniaLos AngelesUnited States
| | - Michelle McCarthy
- Department of Mathematics and Statistics, Boston UniversityBostonUnited States
| | - Nancy Kopell
- Department of Mathematics and Statistics, Boston UniversityBostonUnited States
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21
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Li M, Li C, Ye K, Xu Y, Song W, Liu C, Xing F, Cao G, Wei S, Chen Z, Di Y, Gan Z. Self-Powered Photonic Synapses with Rapid Optical Erasing Ability for Neuromorphic Visual Perception. RESEARCH (WASHINGTON, D.C.) 2024; 7:0526. [PMID: 39512447 PMCID: PMC11542608 DOI: 10.34133/research.0526] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/26/2024] [Revised: 10/12/2024] [Accepted: 10/15/2024] [Indexed: 11/15/2024]
Abstract
Photonic synapses combining photosensitivity and synaptic function can efficiently perceive and memorize visual information, making them crucial for the development of artificial vision systems. However, the development of high-performance photonic synapses with low power consumption and rapid optical erasing ability remains challenging. Here, we propose a photon-modulated charging/discharging mechanism for self-powered photonic synapses. The current hysteresis enables the devices based on CsPbBr3/solvent/carbon nitride multilayer architecture to emulate synaptic behaviors, such as excitatory postsynaptic currents, paired-pulse facilitation, and long/short-term memory. Intriguingly, the unique radiation direction-dependent photocurrent endows the photonic synapses with the capability of optical writing and rapid optical erasing. Moreover, the photonic synapses exhibit exceptional performance in contrast enhancement and noise reduction owing to the notable synaptic plasticity. In simulations based on artificial neural network (ANN) algorithms, the pre-processing by our photonic synapses improves the recognition rate of handwritten digit from 11.4% (200 training epochs) to 85% (~60 training epochs). Furthermore, due to the excellent feature extraction and memory capability, an array based on the photonic synapses can imitate facial recognition of human retina without the assistance of ANN.
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Affiliation(s)
- Mingchao Li
- Center for Future Optoelectronic Functional Materials, School of Computer and Electronic Information/School of Artificial Intelligence,
Nanjing Normal University, Nanjing 210023, P. R. China
| | - Chen Li
- Joint International Research Laboratory of Information Display and Visualization, School of Electronic Science and Engineering,
Southeast University, Nanjing 210096, P. R. China
| | - Kang Ye
- Center for Future Optoelectronic Functional Materials, School of Computer and Electronic Information/School of Artificial Intelligence,
Nanjing Normal University, Nanjing 210023, P. R. China
| | - Yunzhe Xu
- Joint International Research Laboratory of Information Display and Visualization, School of Electronic Science and Engineering,
Southeast University, Nanjing 210096, P. R. China
| | - Weichen Song
- Joint International Research Laboratory of Information Display and Visualization, School of Electronic Science and Engineering,
Southeast University, Nanjing 210096, P. R. China
| | - Cihui Liu
- Center for Future Optoelectronic Functional Materials, School of Computer and Electronic Information/School of Artificial Intelligence,
Nanjing Normal University, Nanjing 210023, P. R. China
| | - Fangjian Xing
- Center for Future Optoelectronic Functional Materials, School of Computer and Electronic Information/School of Artificial Intelligence,
Nanjing Normal University, Nanjing 210023, P. R. China
| | - Guiyuan Cao
- Nanophotonics Research Center, Shenzhen Key Laboratory of Micro-Scale Optical Information Technology,
Shenzhen University, Shenzhen 518060, P. R. China
| | - Shibiao Wei
- Nanophotonics Research Center, Shenzhen Key Laboratory of Micro-Scale Optical Information Technology,
Shenzhen University, Shenzhen 518060, P. R. China
| | - Zhihui Chen
- Key Lab of Advanced Transducers and Intelligent Control System, Ministry of Education and Shanxi Province, College of Electronic Information and Optical Engineering,
Taiyuan University of Technology, Taiyuan 030024, P. R. China
| | - Yunsong Di
- Center for Future Optoelectronic Functional Materials, School of Computer and Electronic Information/School of Artificial Intelligence,
Nanjing Normal University, Nanjing 210023, P. R. China
| | - Zhixing Gan
- Center for Future Optoelectronic Functional Materials, School of Computer and Electronic Information/School of Artificial Intelligence,
Nanjing Normal University, Nanjing 210023, P. R. China
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22
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Zhang T, Wang Q, Xu B. Self-Lateral Propagation Elevates Synaptic Modifications in Spiking Neural Networks for the Efficient Spatial and Temporal Classification. IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS 2024; 35:15359-15371. [PMID: 37389999 DOI: 10.1109/tnnls.2023.3286458] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/02/2023]
Abstract
The brain's mystery for efficient and intelligent computation hides in the neuronal encoding, functional circuits, and plasticity principles in natural neural networks. However, many plasticity principles have not been fully incorporated into artificial or spiking neural networks (SNNs). Here, we report that incorporating a novel feature of synaptic plasticity found in natural networks, whereby synaptic modifications self-propagate to nearby synapses, named self-lateral propagation (SLP), could further improve the accuracy of SNNs in three benchmark spatial and temporal classification tasks. The SLP contains lateral pre ( SLP pre ) and lateral post ( SLP post ) synaptic propagation, describing the spread of synaptic modifications among output synapses made by axon collaterals or among converging synapses on the postsynaptic neuron, respectively. The SLP is biologically plausible and can lead to a coordinated synaptic modification within layers that endow higher efficiency without losing much accuracy. Furthermore, the experimental results showed the impressive role of SLP in sharpening the normal distribution of synaptic weights and broadening the more uniform distribution of misclassified samples, which are both considered essential for understanding the learning convergence and network generalization of neural networks.
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23
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Li J, Bauer R, Rentzeperis I, van Leeuwen C. Adaptive rewiring: a general principle for neural network development. FRONTIERS IN NETWORK PHYSIOLOGY 2024; 4:1410092. [PMID: 39534101 PMCID: PMC11554485 DOI: 10.3389/fnetp.2024.1410092] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/31/2024] [Accepted: 10/15/2024] [Indexed: 11/16/2024]
Abstract
The nervous system, especially the human brain, is characterized by its highly complex network topology. The neurodevelopment of some of its features has been described in terms of dynamic optimization rules. We discuss the principle of adaptive rewiring, i.e., the dynamic reorganization of a network according to the intensity of internal signal communication as measured by synchronization or diffusion, and its recent generalization for applications in directed networks. These have extended the principle of adaptive rewiring from highly oversimplified networks to more neurally plausible ones. Adaptive rewiring captures all the key features of the complex brain topology: it transforms initially random or regular networks into networks with a modular small-world structure and a rich-club core. This effect is specific in the sense that it can be tailored to computational needs, robust in the sense that it does not depend on a critical regime, and flexible in the sense that parametric variation generates a range of variant network configurations. Extreme variant networks can be associated at macroscopic level with disorders such as schizophrenia, autism, and dyslexia, and suggest a relationship between dyslexia and creativity. Adaptive rewiring cooperates with network growth and interacts constructively with spatial organization principles in the formation of topographically distinct modules and structures such as ganglia and chains. At the mesoscopic level, adaptive rewiring enables the development of functional architectures, such as convergent-divergent units, and sheds light on the early development of divergence and convergence in, for example, the visual system. Finally, we discuss future prospects for the principle of adaptive rewiring.
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Affiliation(s)
- Jia Li
- Brain and Cognition, KU Leuven, Leuven, Belgium
- Cognitive Science, RPTU Kaiserslautern, Kaiserslautern, Germany
| | - Roman Bauer
- NICE Research Group, Computer Science Research Centre, University of Surrey, Guildford, United Kingdom
| | - Ilias Rentzeperis
- Institute of Optics, Spanish National Research Council (CSIC), Madrid, Spain
| | - Cees van Leeuwen
- Brain and Cognition, KU Leuven, Leuven, Belgium
- Cognitive Science, RPTU Kaiserslautern, Kaiserslautern, Germany
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24
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Sosis B, Rubin JE. Distinct dopaminergic spike-timing-dependent plasticity rules are suited to different functional roles. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.06.24.600372. [PMID: 38979377 PMCID: PMC11230239 DOI: 10.1101/2024.06.24.600372] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/10/2024]
Abstract
Various mathematical models have been formulated to describe the changes in synaptic strengths resulting from spike-timing-dependent plasticity (STDP). A subset of these models include a third factor, dopamine, which interacts with spike timing to contribute to plasticity at specific synapses, notably those from cortex to striatum at the input layer of the basal ganglia. Theoretical work to analyze these plasticity models has largely focused on abstract issues, such as the conditions under which they may promote synchronization and the weight distributions induced by inputs with simple correlation structures, rather than on scenarios associated with specific tasks, and has generally not considered dopamine-dependent forms of STDP. In this paper we introduce three forms of dopamine-modulated STDP adapted from previously proposed plasticity rules. We then analyze, mathematically and with simulations, their performance in three biologically relevant scenarios. We test the ability of each of the three models to maintain its weights in the face of noise and to complete simple reward prediction and action selection tasks, studying the learned weight distributions and corresponding task performance in each setting. Interestingly, we find that each plasticity rule is well suited to a subset of the scenarios studied but falls short in others. Different tasks may therefore require different forms of synaptic plasticity, yielding the prediction that the precise form of the STDP mechanism present may vary across regions of the striatum, and other brain areas impacted by dopamine, that are involved in distinct computational functions.
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Affiliation(s)
- Baram Sosis
- *Department of Mathematics, University of Pittsburgh, 301 Thackeray Hall, Pittsburgh, 15260, PA, USA
| | - Jonathan E. Rubin
- *Department of Mathematics, University of Pittsburgh, 301 Thackeray Hall, Pittsburgh, 15260, PA, USA
- Center for the Neural Basis of Cognition, University of Pittsburgh, 4400 Fifth Ave, Pittsburgh, 15213, PA, USA
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25
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Cattani A, Arnold DB, McCarthy M, Kopell N. Basolateral amygdala oscillations enable fear learning in a biophysical model. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.04.28.538604. [PMID: 37163011 PMCID: PMC10168360 DOI: 10.1101/2023.04.28.538604] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
The basolateral amygdala (BLA) is a key site where fear learning takes place through synaptic plasticity. Rodent research shows prominent low theta (~3-6 Hz), high theta (~6-12 Hz), and gamma (>30 Hz) rhythms in the BLA local field potential recordings. However, it is not understood what role these rhythms play in supporting the plasticity. Here, we create a biophysically detailed model of the BLA circuit to show that several classes of interneurons (PV, SOM, and VIP) in the BLA can be critically involved in producing the rhythms; these rhythms promote the formation of a dedicated fear circuit shaped through spike-timing-dependent plasticity. Each class of interneurons is necessary for the plasticity. We find that the low theta rhythm is a biomarker of successful fear conditioning. The model makes use of interneurons commonly found in the cortex and, hence, may apply to a wide variety of associative learning situations.
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Affiliation(s)
- Anna Cattani
- Department of Mathematics & Statistics, Boston University, Boston, Massachusetts, United States
| | - Don B Arnold
- Department of Biology, University of Southern California, Los Angeles, California, United States
| | - Michelle McCarthy
- Department of Mathematics & Statistics, Boston University, Boston, Massachusetts, United States
| | - Nancy Kopell
- Department of Mathematics & Statistics, Boston University, Boston, Massachusetts, United States
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26
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Aktay S, Sander LM, Zochowski M. Neuromodulatory effects on synchrony and network reorganization in networks of coupled Kuramoto oscillators. Phys Rev E 2024; 110:044401. [PMID: 39562932 PMCID: PMC11876786 DOI: 10.1103/physreve.110.044401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2023] [Accepted: 08/21/2024] [Indexed: 11/21/2024]
Abstract
Neuromodulatory processes in the brain can critically change signal processing on a cellular level, leading to dramatic changes in network level reorganization. Here, we use coupled nonidentical Kuramoto oscillators to investigate how changes in the shape of phase response curves from Type 1 to Type 2, mediated by varying ACh levels, coupled with activity-dependent plasticity may alter network reorganization. We first show that, when plasticity is absent, the Type 1 networks with symmetric adjacency matrix, as expected, exhibit asynchronous dynamics with oscillators of the highest natural frequency robustly evolving faster in terms of their phase dynamics. However, interestingly, Type 1 networks with an asymmetric connectivity matrix can produce stable synchrony (so-called splay states) with complex phase relationships. At the same time, Type 2 networks synchronize independent of the symmetry of their connectivity matrix, with oscillators locked so that those with higher natural frequency have a constant phase lead as compared to those with lower natural frequency. This relationship establishes a robust mapping between the frequency and oscillators' phases in the network, leading to structure and frequency mapping when plasticity is present. Finally, we show that biologically realistic, phase-locking dependent, connection plasticity naturally produces splay states in Type 1 networks that do not display the structure-frequency reorganization observed in synchronized Type II networks. These results indicate that the formation of splay states in the brain could be a common phenomenon.
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Tiddia G, Sergi L, Golosio B. Theoretical framework for learning through structural plasticity. Phys Rev E 2024; 110:044311. [PMID: 39562962 DOI: 10.1103/physreve.110.044311] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Accepted: 06/19/2024] [Indexed: 11/21/2024]
Abstract
A growing body of research indicates that structural plasticity mechanisms are crucial for learning and memory consolidation. Starting from a simple phenomenological model, we exploit a mean-field approach to develop a theoretical framework of learning through this kind of plasticity, capable of taking into account several features of the connectivity and pattern of activity of biological neural networks, including probability distributions of neuron firing rates, selectivity of the responses of single neurons to multiple stimuli, probabilistic connection rules, and noisy stimuli. More importantly, it describes the effects of stabilization, pruning, and reorganization of synaptic connections. This framework is used to compute the values of some relevant quantities used to characterize the learning and memory capabilities of the neuronal network in training and testing procedures as the number of training patterns and other model parameters vary. The results are then compared with those obtained through simulations with firing-rate-based neuronal network models.
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28
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Mackay S, Reber TP, Bausch M, Boström J, Elger CE, Mormann F. Concept and location neurons in the human brain provide the 'what' and 'where' in memory formation. Nat Commun 2024; 15:7926. [PMID: 39256373 PMCID: PMC11387663 DOI: 10.1038/s41467-024-52295-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2021] [Accepted: 08/29/2024] [Indexed: 09/12/2024] Open
Abstract
Our brains create new memories by capturing the 'who/what', 'where' and 'when' of everyday experiences. On a neuronal level, mechanisms facilitating a successful transfer into episodic memory are still unclear. We investigated this by measuring single neuron activity in the human medial temporal lobe during encoding of item-location associations. While previous research has found predictive effects in population activity in human MTL structures, we could attribute such effects to two specialized sub-groups of neurons: concept cells in the hippocampus, amygdala and entorhinal cortex (EC), and a second group of parahippocampal location-selective neurons. In both item- and location-selective populations, firing rates were significantly higher during successfully encoded trials. These findings are in line with theories of hippocampal indexing, since selective index neurons may act as pointers to neocortical representations. Overall, activation of distinct populations of neurons could directly support the connection of the 'what' and 'where' of episodic memory.
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Affiliation(s)
- Sina Mackay
- Department of Epileptology, University Hospital Bonn, Bonn, Germany
| | - Thomas P Reber
- Department of Epileptology, University Hospital Bonn, Bonn, Germany
- Faculty of Psychology, UniDistance Suisse, Brig, Switzerland
| | - Marcel Bausch
- Department of Epileptology, University Hospital Bonn, Bonn, Germany
| | - Jan Boström
- Department of Neurosurgery, University Hospital Bonn, Bonn, Germany
| | | | - Florian Mormann
- Department of Epileptology, University Hospital Bonn, Bonn, Germany.
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29
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Liu X, Sun C, Ye X, Zhu X, Hu C, Tan H, He S, Shao M, Li RW. Neuromorphic Nanoionics for Human-Machine Interaction: From Materials to Applications. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2024; 36:e2311472. [PMID: 38421081 DOI: 10.1002/adma.202311472] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 02/06/2024] [Indexed: 03/02/2024]
Abstract
Human-machine interaction (HMI) technology has undergone significant advancements in recent years, enabling seamless communication between humans and machines. Its expansion has extended into various emerging domains, including human healthcare, machine perception, and biointerfaces, thereby magnifying the demand for advanced intelligent technologies. Neuromorphic computing, a paradigm rooted in nanoionic devices that emulate the operations and architecture of the human brain, has emerged as a powerful tool for highly efficient information processing. This paper delivers a comprehensive review of recent developments in nanoionic device-based neuromorphic computing technologies and their pivotal role in shaping the next-generation of HMI. Through a detailed examination of fundamental mechanisms and behaviors, the paper explores the ability of nanoionic memristors and ion-gated transistors to emulate the intricate functions of neurons and synapses. Crucial performance metrics, such as reliability, energy efficiency, flexibility, and biocompatibility, are rigorously evaluated. Potential applications, challenges, and opportunities of using the neuromorphic computing technologies in emerging HMI technologies, are discussed and outlooked, shedding light on the fusion of humans with machines.
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Affiliation(s)
- Xuerong Liu
- CAS Key Laboratory of Magnetic Materials and Devices, and Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
- Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
- College of Materials Sciences and Opto-Electronic Technology, University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Cui Sun
- CAS Key Laboratory of Magnetic Materials and Devices, and Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
- Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
| | - Xiaoyu Ye
- CAS Key Laboratory of Magnetic Materials and Devices, and Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
- Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
| | - Xiaojian Zhu
- CAS Key Laboratory of Magnetic Materials and Devices, and Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
- Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
| | - Cong Hu
- CAS Key Laboratory of Magnetic Materials and Devices, and Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
- Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
| | - Hongwei Tan
- Department of Applied Physics, Aalto University, Aalto, FI-00076, Finland
| | - Shang He
- CAS Key Laboratory of Magnetic Materials and Devices, and Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
- Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
| | - Mengjie Shao
- CAS Key Laboratory of Magnetic Materials and Devices, and Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
- Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
| | - Run-Wei Li
- CAS Key Laboratory of Magnetic Materials and Devices, and Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
- Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, China
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30
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Farrell M, Pehlevan C. Recall tempo of Hebbian sequences depends on the interplay of Hebbian kernel with tutor signal timing. Proc Natl Acad Sci U S A 2024; 121:e2309876121. [PMID: 39078676 PMCID: PMC11317560 DOI: 10.1073/pnas.2309876121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Accepted: 06/04/2024] [Indexed: 07/31/2024] Open
Abstract
Understanding how neural circuits generate sequential activity is a longstanding challenge. While foundational theoretical models have shown how sequences can be stored as memories in neural networks with Hebbian plasticity rules, these models considered only a narrow range of Hebbian rules. Here, we introduce a model for arbitrary Hebbian plasticity rules, capturing the diversity of spike-timing-dependent synaptic plasticity seen in experiments, and show how the choice of these rules and of neural activity patterns influences sequence memory formation and retrieval. In particular, we derive a general theory that predicts the tempo of sequence replay. This theory lays a foundation for explaining how cortical tutor signals might give rise to motor actions that eventually become "automatic." Our theory also captures the impact of changing the tempo of the tutor signal. Beyond shedding light on biological circuits, this theory has relevance in artificial intelligence by laying a foundation for frameworks whereby slow and computationally expensive deliberation can be stored as memories and eventually replaced by inexpensive recall.
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Affiliation(s)
- Matthew Farrell
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA02138
- Center for Brain Science, Harvard University, Cambridge, MA02138
| | - Cengiz Pehlevan
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA02138
- Center for Brain Science, Harvard University, Cambridge, MA02138
- Kempner Institute for the Study of Natural and Artificial Intelligence, Harvard University, Cambridge, MA02138
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31
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Lim JG, Park SJ, Lee SM, Jeong Y, Kim J, Lee S, Park J, Hwang GW, Lee KS, Park S, Jang HJ, Ju BK, Park JK, Kim I. Hybrid CMOS-Memristor synapse circuits for implementing Ca ion-based plasticity model. Sci Rep 2024; 14:17915. [PMID: 39095461 PMCID: PMC11297293 DOI: 10.1038/s41598-024-68359-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Accepted: 07/23/2024] [Indexed: 08/04/2024] Open
Abstract
Neuromorphic computing research is being actively pursued to address the challenges posed by the need for energy-efficient processing of big data. One of the promising approaches to tackle the challenges is the hardware implementation of spiking neural networks (SNNs) with bio-plausible learning rules. Numerous research works have been done to implement the SNN hardware with different synaptic plasticity rules to emulate human brain operations. While a standard spike-timing-dependent-plasticity (STDP) rule is emulated in many SNN hardware, the various STDP rules found in the biological brain have rarely been implemented in hardware. This study proposes a CMOS-memristor hybrid synapse circuit for the hardware implementation of a Ca ion-based plasticity model to emulate the various STDP curves. The memristor was adopted as a memory device in the CMOS synapse circuit because memristors have been identified as promising candidates for analog non-volatile memory devices in terms of energy efficiency and scalability. The circuit design was divided into four sub-blocks based on biological behavior, exploiting the non-volatile and analog state properties of memristors. The circuit was designed to vary weights using an H-bridge circuit structure and PWM modulation. The various STDP curves have been emulated in one CMOS-memristor hybrid circuit, and furthermore a simple neural network operation was demonstrated for associative learning such as Pavlovian conditioning. The proposed circuit is expected to facilitate large-scale operations for neuromorphic computing through its scale-up.
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Affiliation(s)
- Jae Gwang Lim
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea
- School of Electrical Engineering, Korea University, Seoul, 02841, South Korea
| | - Sung-Jae Park
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea
- Department of Micro/Nano Systems, Korea University, Seoul, 02841, South Korea
| | - Sang Min Lee
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea
- Department of Micro/Nano Systems, Korea University, Seoul, 02841, South Korea
| | - Yeonjoo Jeong
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea
| | - Jaewook Kim
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea
| | - Suyoun Lee
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea
| | - Jongkil Park
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea
| | - Gyu Weon Hwang
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea
| | - Kyeong-Seok Lee
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea
| | - Seongsik Park
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea
| | - Hyun Jae Jang
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea
| | - Byeong-Kwon Ju
- School of Electrical Engineering, Korea University, Seoul, 02841, South Korea.
- Department of Micro/Nano Systems, Korea University, Seoul, 02841, South Korea.
| | - Jong Keuk Park
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea.
| | - Inho Kim
- Center for Semiconductor Technology, Korea Institute of Science and Technology, Seoul, 02792, South Korea.
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Chen Z, Padmanabhan K. Adult-neurogenesis allows for representational stability and flexibility in early olfactory system. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.07.02.601573. [PMID: 39005290 PMCID: PMC11244980 DOI: 10.1101/2024.07.02.601573] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/16/2024]
Abstract
In the early olfactory system, adult-neurogenesis, a process of neuronal replacement results in the continuous reorganization of synaptic connections and network architecture throughout the animal's life. This poses a critical challenge: How does the olfactory system maintain stable representations of odors and therefore allow for stable sensory perceptions amidst this ongoing circuit instability? Utilizing a detailed spiking network model of early olfactory circuits, we uncovered dual roles for adult-neurogenesis: one that both supports representational stability to faithfully encode odor information and also one that facilitates plasticity to allow for learning and adaptation. In the main olfactory bulb, adult-neurogenesis affects neural codes in individual mitral and tufted cells but preserves odor representations at the neuronal population level. By contrast, in the olfactory piriform cortex, both individual cell responses and overall population dynamics undergo progressive changes due to adult-neurogenesis. This leads to representational drift, a gradual alteration in sensory perception. Both processes are dynamic and depend on experience such that repeated exposure to specific odors reduces the drift due to adult-neurogenesis; thus, when the odor environment is stable over the course of adult-neurogenesis, it is neurogenesis that actually allows the representations to remain stable in piriform cortex; when those olfactory environments change, adult-neurogenesis allows the cortical representations to track environmental change. Whereas perceptual stability and plasticity due to learning are often thought of as two distinct, often contradictory processing in neuronal coding, we find that adult-neurogenesis serves as a shared mechanism for both. In this regard, the quixotic presence of adult-neurogenesis in the mammalian olfactory bulb that has been the focus of considerable debate in chemosensory neuroscience may be the mechanistic underpinning behind an array of complex computations.
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Affiliation(s)
- Zhen Chen
- Department of Brain and Cognitive Sciences, University of Rochester, Rochester, NY14627
| | - Krishnan Padmanabhan
- Department of Neuroscience, University of Rochester School of Medicine and Dentistry, Rochester, NY 14642
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33
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Yu JM, Kim Y, Lee C, Jeong B, Kim JK, Han JK, Yang J, Yun SY, Im SG, Choi YK. Bio-Inspired Organic Synaptor with In Situ Ion-Doped Ultrathin Polyelectrolyte Containing Acetylcholine-Like Cation. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2024; 20:e2312283. [PMID: 38409517 DOI: 10.1002/smll.202312283] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2023] [Revised: 02/14/2024] [Indexed: 02/28/2024]
Abstract
An ion-based synaptic transistor (synaptor) is designed to emulate a biological synapse using controlled ion movements. However, developing a solid-state electrolyte that can facilitate ion movement while achieving large-scale integration remains challenging. Here, a bio-inspired organic synaptor (BioSyn) with an in situ ion-doped polyelectrolyte (i-IDOPE) is demonstrated. At the molecular scale, a polyelectrolyte containing the tert-amine cation, inspired by the neurotransmitter acetylcholine is synthesized using initiated chemical vapor deposition (iCVD) with in situ doping, a one-step vapor-phase deposition used to fabricate solid-state electrolytes. This method results in an ultrathin, but highly uniform and conformal solid-state electrolyte layer compatible with large-scale integration, a form that is not previously attainable. At a synapse scale, synapse functionality is replicated, including short-term and long-term synaptic plasticity (STSP and LTSP), along with a transformation from STSP to LTSP regulated by pre-synaptic voltage spikes. On a system scale, a reflex in a peripheral nervous system is mimicked by mounting the BioSyns on various substrates such as rigid glass, flexible polyethylene naphthalate, and stretchable poly(styrene-ethylene-butylene-styrene) for a decentralized processing unit. Finally, a classification accuracy of 90.6% is achieved through semi-empirical simulations of MNIST pattern recognition, incorporating the measured LTSP characteristics from the BioSyns.
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Affiliation(s)
- Ji-Man Yu
- School of Electrical Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Youson Kim
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Changhyeon Lee
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Booseok Jeong
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Jin-Ki Kim
- School of Electrical Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Joon-Kyu Han
- System Semiconductor Engineering and Department of Electronic Engineering, Sogang University, 35 Baekbeom-ro, Mapo-gu, Seoul, 04107, Republic of Korea
| | - Junyeong Yang
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Seong-Yun Yun
- School of Electrical Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Sung Gap Im
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Yang-Kyu Choi
- School of Electrical Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
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Chauhan K, Neiman AB, Tass PA. Synaptic reorganization of synchronized neuronal networks with synaptic weight and structural plasticity. PLoS Comput Biol 2024; 20:e1012261. [PMID: 38980898 PMCID: PMC11259284 DOI: 10.1371/journal.pcbi.1012261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Revised: 07/19/2024] [Accepted: 06/20/2024] [Indexed: 07/11/2024] Open
Abstract
Abnormally strong neural synchronization may impair brain function, as observed in several brain disorders. We computationally study how neuronal dynamics, synaptic weights, and network structure co-emerge, in particular, during (de)synchronization processes and how they are affected by external perturbation. To investigate the impact of different types of plasticity mechanisms, we combine a network of excitatory integrate-and-fire neurons with different synaptic weight and/or structural plasticity mechanisms: (i) only spike-timing-dependent plasticity (STDP), (ii) only homeostatic structural plasticity (hSP), i.e., without weight-dependent pruning and without STDP, (iii) a combination of STDP and hSP, i.e., without weight-dependent pruning, and (iv) a combination of STDP and structural plasticity (SP) that includes hSP and weight-dependent pruning. To accommodate the diverse time scales of neuronal firing, STDP, and SP, we introduce a simple stochastic SP model, enabling detailed numerical analyses. With tools from network theory, we reveal that structural reorganization may remarkably enhance the network's level of synchrony. When weaker contacts are preferentially eliminated by weight-dependent pruning, synchrony is achieved with significantly sparser connections than in randomly structured networks in the STDP-only model. In particular, the strengthening of contacts from neurons with higher natural firing rates to those with lower rates and the weakening of contacts in the opposite direction, followed by selective removal of weak contacts, allows for strong synchrony with fewer connections. This activity-led network reorganization results in the emergence of degree-frequency, degree-degree correlations, and a mixture of degree assortativity. We compare the stimulation-induced desynchronization of synchronized states in the STDP-only model (i) with the desynchronization of models (iii) and (iv). The latter require stimuli of significantly higher intensity to achieve long-term desynchronization. These findings may inform future pre-clinical and clinical studies with invasive or non-invasive stimulus modalities aiming at inducing long-lasting relief of symptoms, e.g., in Parkinson's disease.
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Affiliation(s)
- Kanishk Chauhan
- Department of Physics and Astronomy, Ohio University, Athens, Ohio, United States of America
- Neuroscience Program, Ohio University, Athens, Ohio, United States of America
| | - Alexander B. Neiman
- Department of Physics and Astronomy, Ohio University, Athens, Ohio, United States of America
- Neuroscience Program, Ohio University, Athens, Ohio, United States of America
| | - Peter A. Tass
- Department of Neurosurgery, Stanford University, Stanford, California, United States of America
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35
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McKissick O, Klimpert N, Ritt JT, Fleischmann A. Odors in space. Front Neural Circuits 2024; 18:1414452. [PMID: 38978957 PMCID: PMC11228174 DOI: 10.3389/fncir.2024.1414452] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Accepted: 05/29/2024] [Indexed: 07/10/2024] Open
Abstract
As an evolutionarily ancient sense, olfaction is key to learning where to find food, shelter, mates, and important landmarks in an animal's environment. Brain circuitry linking odor and navigation appears to be a well conserved multi-region system among mammals; the anterior olfactory nucleus, piriform cortex, entorhinal cortex, and hippocampus each represent different aspects of olfactory and spatial information. We review recent advances in our understanding of the neural circuits underlying odor-place associations, highlighting key choices of behavioral task design and neural circuit manipulations for investigating learning and memory.
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Affiliation(s)
- Olivia McKissick
- Department of Neuroscience and Carney Institute for Brain Science, Brown University, Providence, RI, United States
| | - Nell Klimpert
- Department of Neuroscience and Carney Institute for Brain Science, Brown University, Providence, RI, United States
| | - Jason T Ritt
- Carney Institute for Brain Science, Brown University, Providence, RI, United States
| | - Alexander Fleischmann
- Department of Neuroscience and Carney Institute for Brain Science, Brown University, Providence, RI, United States
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Li N, Feng Y, Huang Y, Zhou P, Mu P, Xiang S. Characterizing the aggregated encoding method utilizing bursts activated by a VCSEL-neuron with a feedback structure. OPTICS EXPRESS 2024; 32:20370-20384. [PMID: 38859150 DOI: 10.1364/oe.521746] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Accepted: 05/02/2024] [Indexed: 06/12/2024]
Abstract
The rapid advancement of photonic technologies has facilitated the development of photonic neurons that emulate neuronal functionalities akin to those observed in the human brain. Neuronal bursts frequently occur in behaviors where information is encoded and transmitted. Here, we present the demonstration of the bursting response activated by an artificial photonic neuron. This neuron utilizes a single vertical-cavity surface-emitting laser (VCSEL) and encodes multiple stimuli effectively by varying the spike count during a burst based on the polarization competition in the VCSEL. By virtue of the modulated optical injection in the VCSEL employed to trigger the spiking response, we activate bursts output in the VCSEL with a feedback structure in this scheme. The bursting response activated by the VCSEL-neuron exhibits neural signal characteristics, promising an excitation threshold and the refractory period. Significantly, this marks the inaugural implementation of a controllable integrated encoding scheme predicated on bursts within photonic neurons. There are two remarkable merits; on the one hand, the interspike interval of bursts is distinctly diminished, amounting to merely one twenty-fourth compared to that observed in optoelectronic oscillators. Moreover, the interspike period of bursts is about 70.8% shorter than the period of spikes activated by a VCSEL neuron without optical feedback. Our results may shed light on the analogy between optical and biological neurons and open the door to fast burst encoding-based optical systems with a speed several orders of magnitude faster than their biological counterparts.
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Zhou H, Bi GQ, Liu G. Intracellular magnesium optimizes transmission efficiency and plasticity of hippocampal synapses by reconfiguring their connectivity. Nat Commun 2024; 15:3406. [PMID: 38649706 PMCID: PMC11035601 DOI: 10.1038/s41467-024-47571-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Accepted: 04/02/2024] [Indexed: 04/25/2024] Open
Abstract
Synapses at dendritic branches exhibit specific properties for information processing. However, how the synapses are orchestrated to dynamically modify their properties, thus optimizing information processing, remains elusive. Here, we observed at hippocampal dendritic branches diverse configurations of synaptic connectivity, two extremes of which are characterized by low transmission efficiency, high plasticity and coding capacity, or inversely. The former favors information encoding, pertinent to learning, while the latter prefers information storage, relevant to memory. Presynaptic intracellular Mg2+ crucially mediates the dynamic transition continuously between the two extreme configurations. Consequently, varying intracellular Mg2+ levels endow individual branches with diverse synaptic computations, thus modulating their ability to process information. Notably, elevating brain Mg2+ levels in aging animals restores synaptic configuration resembling that of young animals, coincident with improved learning and memory. These findings establish intracellular Mg2+ as a crucial factor reconfiguring synaptic connectivity at dendrites, thus optimizing their branch-specific properties in information processing.
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Affiliation(s)
- Hang Zhou
- Faculty of Life and Health Sciences, Shenzhen University of Advanced Technology, Shenzhen, 518107, China.
- Interdisciplinary Center for Brain Information, Brain Cognition and Brain Disease Institute, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China.
| | - Guo-Qiang Bi
- Faculty of Life and Health Sciences, Shenzhen University of Advanced Technology, Shenzhen, 518107, China
- Interdisciplinary Center for Brain Information, Brain Cognition and Brain Disease Institute, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China
- Shenzhen-Hong Kong Institute of Brain Science, Shenzhen, 518055, China
- Hefei National Laboratory for Physical Sciences at the Microscale, and School of Life Sciences, University of Science and Technology of China, Hefei, 230031, China
| | - Guosong Liu
- School of Medicine, Tsinghua University, Beijing, 100084, China.
- NeuroCentria Inc., Walnut Creek, CA, 94596, USA.
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Fleischer P, Abbasi A, Gulati T. Modulation of neural spiking in motor cortex-cerebellar networks during sleep spindles. eNeuro 2024; 11:ENEURO.0150-23.2024. [PMID: 38641414 DOI: 10.1523/eneuro.0150-23.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Revised: 03/21/2024] [Accepted: 03/28/2024] [Indexed: 04/21/2024] Open
Abstract
Sleep spindles appear to play an important role in learning new motor skills. Motor skill learning engages several regions in the brain with two important areas being the motor cortex (M1) and the cerebellum. However, the neurophysiological processes in these areas during sleep, especially how spindle oscillations affect local and cross-region spiking, are not fully understood. We recorded activity from the M1 and cerebellar cortex in 8 rats during spontaneous activity to investigate how sleep spindles in these regions are related to local spiking as well as cross-region spiking. We found that M1 firing was significantly changed during both M1 and cerebellum spindles and this spiking occurred at a preferred phase of the spindle. On average, M1 and cerebellum neurons showed most spiking at the M1 or cerebellum spindle peaks. These neurons also developed a preferential phase-locking to local or cross-area spindles with the greatest phase-locking value at spindle peaks; however, this preferential phase-locking wasn't significant for cerebellar neurons when compared to cerebellum spindles. Additionally, we found the percentage of task-modulated cells in the M1 and cerebellum that fired with non-uniform spike-phase distribution during M1/ cerebellum spindle peaks were greater in the rats that learned a reach-to-grasp motor task robustly. Finally, we found that spindle-band LFP coherence (for M1 and cerebellum LFPs) showed a positive correlation with success rate in the motor task. These findings support the idea that sleep spindles in both the M1 and cerebellum recruit neurons that participate in the awake task to support motor memory consolidation.Significance Statement Neural processing during sleep spindles is linked to memory consolidation. However, little is known about sleep activity in the cerebellum and whether cerebellum spindles can affect spiking activity in local or distant areas. We report the effect of sleep spindles on neuron activity in the M1 and cerebellum-specifically their firing rate and phase-locking to spindle oscillations. Our results indicate that awake practice neuronal activity is tempered during local M1 and cerebellum spindles, and during cross-region spindles, which may support motor skill learning. We describe spiking dynamics in motor networks spindle oscillations that may aid in the learning of skills. Our results support the sleep reactivation hypothesis and suggest that awake M1 activity may be reactivated during cerebellum spindles.
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Affiliation(s)
- Pierson Fleischer
- Center for Neural Science and Medicine, Department of Biomedical Sciences, Cedars-Sinai Medical Center, 8700 Beverly Blvd, Los Angeles, CA 90048
| | - Aamir Abbasi
- Center for Neural Science and Medicine, Department of Biomedical Sciences, Cedars-Sinai Medical Center, 8700 Beverly Blvd, Los Angeles, CA 90048
| | - Tanuj Gulati
- Center for Neural Science and Medicine, Department of Biomedical Sciences, Cedars-Sinai Medical Center, 8700 Beverly Blvd, Los Angeles, CA 90048
- Department of Neurology, Cedars-Sinai Medical Center, 8700 Beverly Blvd, Los Angeles, CA 90048
- Department of Medicine, David Geffen School of Medicine; and Department of Bioengineering, Henry Samueli School of Engineering, University of California-Los Angeles, 10833 Le Conte Ave, Los Angeles, CA 90095
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Valderhaug VD, Ramstad OH, van de Wijdeven R, Heiney K, Nichele S, Sandvig A, Sandvig I. Micro-and mesoscale aspects of neurodegeneration in engineered human neural networks carrying the LRRK2 G2019S mutation. Front Cell Neurosci 2024; 18:1366098. [PMID: 38644975 PMCID: PMC11026646 DOI: 10.3389/fncel.2024.1366098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2024] [Accepted: 03/11/2024] [Indexed: 04/23/2024] Open
Abstract
Mutations in the leucine-rich repeat kinase 2 (LRRK2) gene have been widely linked to Parkinson's disease, where the G2019S variant has been shown to contribute uniquely to both familial and sporadic forms of the disease. LRRK2-related mutations have been extensively studied, yet the wide variety of cellular and network events related to these mutations remain poorly understood. The advancement and availability of tools for neural engineering now enable modeling of selected pathological aspects of neurodegenerative disease in human neural networks in vitro. Our study revealed distinct pathology associated dynamics in engineered human cortical neural networks carrying the LRRK2 G2019S mutation compared to healthy isogenic control neural networks. The neurons carrying the LRRK2 G2019S mutation self-organized into networks with aberrant morphology and mitochondrial dynamics, affecting emerging structure-function relationships both at the micro-and mesoscale. Taken together, the findings of our study points toward an overall heightened metabolic demand in networks carrying the LRRK2 G2019S mutation, as well as a resilience to change in response to perturbation, compared to healthy isogenic controls.
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Affiliation(s)
- Vibeke Devold Valderhaug
- Department of Research and Innovation, Møre and Romsdal Hospital Trust, Ålesund, Norway
- Department of Neuromedicine and Movement Science, Faculty of Medicine, Norwegian University of Science and Technology (NTNU), Trondheim, Norway
| | - Ola Huse Ramstad
- Department of Neuromedicine and Movement Science, Faculty of Medicine, Norwegian University of Science and Technology (NTNU), Trondheim, Norway
| | - Rosanne van de Wijdeven
- Department of Clinical and Molecular Medicine, Faculty of Medicine and Health Sciences, NTNU, Trondheim, Norway
| | - Kristine Heiney
- Department of Computer Science, Faculty of Technology, Art and Design, Oslo Metropolitan University (OsloMet), Oslo, Norway
- Department of Computer Science, Faculty of Information Technology and Electrical Engineering, NTNU, Trondheim, Norway
| | - Stefano Nichele
- Department of Computer Science, Faculty of Technology, Art and Design, Oslo Metropolitan University (OsloMet), Oslo, Norway
- Department of Computer Science and Communication, Østfold University College, Halden, Norway
| | - Axel Sandvig
- Department of Neuromedicine and Movement Science, Faculty of Medicine, Norwegian University of Science and Technology (NTNU), Trondheim, Norway
- Department of Clinical Neuroscience, Division of Neuro, Head and Neck, Umeå University Hospital, Umeå, Sweden
- Department of Community Medicine and Rehabilitation, Umeå University, Umeå, Sweden
- Department of Neurology and Clinical Neurophysiology, St Olav’s Hospital, Trondheim, Norway
| | - Ioanna Sandvig
- Department of Neuromedicine and Movement Science, Faculty of Medicine, Norwegian University of Science and Technology (NTNU), Trondheim, Norway
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40
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Staresina BP. Coupled sleep rhythms for memory consolidation. Trends Cogn Sci 2024; 28:339-351. [PMID: 38443198 DOI: 10.1016/j.tics.2024.02.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Revised: 02/02/2024] [Accepted: 02/02/2024] [Indexed: 03/07/2024]
Abstract
How do passing moments turn into lasting memories? Sheltered from external tasks and distractions, sleep constitutes an optimal state for the brain to reprocess and consolidate previous experiences. Recent work suggests that consolidation is governed by the intricate interaction of slow oscillations (SOs), spindles, and ripples - electrophysiological sleep rhythms that orchestrate neuronal processing and communication within and across memory circuits. This review describes how sequential SO-spindle-ripple coupling provides a temporally and spatially fine-tuned mechanism to selectively strengthen target memories across hippocampal and cortical networks. Coupled sleep rhythms might be harnessed not only to enhance overnight memory retention, but also to combat memory decline associated with healthy ageing and neurodegenerative diseases.
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Affiliation(s)
- Bernhard P Staresina
- Department of Experimental Psychology, University of Oxford, Oxford, UK; Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, UK.
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41
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Held LK, Cracco E, Bardi L, Kiraga M, Cristianelli E, Brass M, Abrahamse EL, Braem S. Associative Visuomotor Learning Using Transcranial Magnetic Stimulation Induces Stimulus-Response Interference. J Cogn Neurosci 2024; 36:522-533. [PMID: 38165734 DOI: 10.1162/jocn_a_02100] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2024]
Abstract
Classical conditioning states that the systematic co-occurrence of a neutral stimulus with an unconditioned stimulus can cause the neutral stimulus to, over time, evoke the same response as the unconditioned stimulus. On a neural level, Hebbian learning suggests that this type of learning occurs through changes in synaptic plasticity when two neurons are simultaneously active, resulting in increased connectivity between them. Inspired by associative learning theories, we here investigated whether the mere co-activation of visual stimuli and stimulation of the primary motor cortex using TMS would result in stimulus-response associations that can impact future behavior. During a learning phase, we repeatedly paired the presentation of a specific color (but not other colors) with a TMS pulse over the motor cortex. Next, participants performed a two-alternative forced-choice task where they had to categorize simple shapes and we studied whether the shapes' task-irrelevant color (and its potentially associated involuntary motor activity) affected the required motor response. Participants showed more errors on incongruent trials for stimuli that were previously paired with high intensity TMS pulses, but only when tested on the same day. Using a drift diffusion model for conflict tasks, we further demonstrate that this interference occurred early, and gradually increased as a function of associated TMS intensity. Taken together, our findings show that the human brain can learn stimulus-response associations using externally induced motor cortex stimulation. Although we were inspired by the Hebbian learning literature, future studies should investigate whether Hebbian or other learning processes were also what brought about this effect.
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Affiliation(s)
| | | | - Lara Bardi
- Ghent University, Belgium
- Institut des Sciences Cognitives Marc Jeannerod, Bron, France
- Université Claude Bernard, Lyon 1, Villeurbanne, France
| | | | | | - Marcel Brass
- Ghent University, Belgium
- Humboldt Universität zu Berlin, Germany
| | - Elger L Abrahamse
- Tilburg University, The Netherlands
- Atlántico Medio University, Spain
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42
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Kunz L, Staresina BP, Reinacher PC, Brandt A, Guth TA, Schulze-Bonhage A, Jacobs J. Ripple-locked coactivity of stimulus-specific neurons and human associative memory. Nat Neurosci 2024; 27:587-599. [PMID: 38366143 PMCID: PMC10917673 DOI: 10.1038/s41593-023-01550-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2022] [Accepted: 12/11/2023] [Indexed: 02/18/2024]
Abstract
Associative memory enables the encoding and retrieval of relations between different stimuli. To better understand its neural basis, we investigated whether associative memory involves temporally correlated spiking of medial temporal lobe (MTL) neurons that exhibit stimulus-specific tuning. Using single-neuron recordings from patients with epilepsy performing an associative object-location memory task, we identified the object-specific and place-specific neurons that represented the separate elements of each memory. When patients encoded and retrieved particular memories, the relevant object-specific and place-specific neurons activated together during hippocampal ripples. This ripple-locked coactivity of stimulus-specific neurons emerged over time as the patients' associative learning progressed. Between encoding and retrieval, the ripple-locked timing of coactivity shifted, suggesting flexibility in the interaction between MTL neurons and hippocampal ripples according to behavioral demands. Our results are consistent with a cellular account of associative memory, in which hippocampal ripples coordinate the activity of specialized cellular populations to facilitate links between stimuli.
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Affiliation(s)
- Lukas Kunz
- Department of Epileptology, University Hospital Bonn, Bonn, Germany.
- Epilepsy Center, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
| | - Bernhard P Staresina
- Department of Experimental Psychology, University of Oxford, Oxford, UK
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, Oxford, UK
| | - Peter C Reinacher
- Department of Stereotactic and Functional Neurosurgery, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany
- Fraunhofer Institute for Laser Technology, Aachen, Germany
| | - Armin Brandt
- Epilepsy Center, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany
| | - Tim A Guth
- Department of Epileptology, University Hospital Bonn, Bonn, Germany
- Epilepsy Center, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany
| | - Andreas Schulze-Bonhage
- Epilepsy Center, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany
| | - Joshua Jacobs
- Department of Biomedical Engineering, Columbia University, New York, NY, USA
- Department of Neurological Surgery, Columbia University Medical Center, New York, NY, USA
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43
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Aktay S, Sander LM, Zochowski M. Neuromodulatory effects on synchrony and network reorganization in networks of coupled Kuramoto oscillators. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.02.27.582261. [PMID: 38464134 PMCID: PMC10925310 DOI: 10.1101/2024.02.27.582261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/12/2024]
Abstract
Neuromodulatory processes in the brain can critically change signal processing on a cellular level leading to dramatic changes in network level reorganization. Here, we use coupled non-identical Kuramoto oscillators to investigate how changes in the shape of phase response curves from Type 1 to Type 2, mediated by varying ACh levels, coupled with activity dependent plasticity may alter network reorganization. We first show that when plasticity is absent, the Type 1 networks, as expected, exhibit asynchronous dynamics with oscillators of the highest natural frequency robustly evolving faster in terms of their phase dynamics. At the same time, the Type 2 networks synchronize, with oscillators locked so that the ones with higher natural frequency have a constant phase lead as compared to the ones with lower natural frequency. This relationship establishes a robust mapping between the frequency and oscillators' phases in the network, leading to structure/frequency mapping when plasticity is present. Further we show that while connection plasticity can produce stable synchrony (so called splay states) in Type 1 networks, the structure/frequency reorganization observed in Type 2 networks is not present.
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44
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O'Neill KM, Anderson ED, Mukherjee S, Gandu S, McEwan SA, Omelchenko A, Rodriguez AR, Losert W, Meaney DF, Babadi B, Firestein BL. Time-dependent homeostatic mechanisms underlie brain-derived neurotrophic factor action on neural circuitry. Commun Biol 2023; 6:1278. [PMID: 38110605 PMCID: PMC10728104 DOI: 10.1038/s42003-023-05638-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2023] [Accepted: 11/27/2023] [Indexed: 12/20/2023] Open
Abstract
Plasticity and homeostatic mechanisms allow neural networks to maintain proper function while responding to physiological challenges. Despite previous work investigating morphological and synaptic effects of brain-derived neurotrophic factor (BDNF), the most prevalent growth factor in the central nervous system, how exposure to BDNF manifests at the network level remains unknown. Here we report that BDNF treatment affects rodent hippocampal network dynamics during development and recovery from glutamate-induced excitotoxicity in culture. Importantly, these effects are not obvious when traditional activity metrics are used, so we delve more deeply into network organization, functional analyses, and in silico simulations. We demonstrate that BDNF partially restores homeostasis by promoting recovery of weak and medium connections after injury. Imaging and computational analyses suggest these effects are caused by changes to inhibitory neurons and connections. From our in silico simulations, we find that BDNF remodels the network by indirectly strengthening weak excitatory synapses after injury. Ultimately, our findings may explain the difficulties encountered in preclinical and clinical trials with BDNF and also offer information for future trials to consider.
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Affiliation(s)
- Kate M O'Neill
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ, USA
- Biomedical Engineering Graduate Program, Rutgers University, Piscataway, NJ, USA
- Institute for Physical Science & Technology, University of Maryland, College Park, MD, USA
| | - Erin D Anderson
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
| | - Shoutik Mukherjee
- Department of Electrical and Computer Engineering, University of Maryland, College Park, MD, USA
| | - Srinivasa Gandu
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ, USA
- Cell and Developmental Biology Graduate Program, Rutgers University, Piscataway, NJ, USA
| | - Sara A McEwan
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ, USA
- Neuroscience Graduate Program, Rutgers University, Piscataway, NJ, USA
| | - Anton Omelchenko
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ, USA
- Neuroscience Graduate Program, Rutgers University, Piscataway, NJ, USA
| | - Ana R Rodriguez
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ, USA
- Biomedical Engineering Graduate Program, Rutgers University, Piscataway, NJ, USA
| | - Wolfgang Losert
- Department of Physics, University of Maryland, College Park, MD, USA
- Institute for Physical Science & Technology, University of Maryland, College Park, MD, USA
| | - David F Meaney
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
- Department of Neurosurgery, University of Pennsylvania, Philadelphia, PA, USA
| | - Behtash Babadi
- Department of Electrical and Computer Engineering, University of Maryland, College Park, MD, USA
| | - Bonnie L Firestein
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ, USA.
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45
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Zhao Y, Lu E, Zeng Y. Brain-inspired bodily self-perception model for robot rubber hand illusion. PATTERNS (NEW YORK, N.Y.) 2023; 4:100888. [PMID: 38106608 PMCID: PMC10724368 DOI: 10.1016/j.patter.2023.100888] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Revised: 08/21/2023] [Accepted: 11/07/2023] [Indexed: 12/19/2023]
Abstract
The core of bodily self-consciousness involves perceiving ownership of one's body. A central question is how body illusions like the rubber hand illusion (RHI) occur. Existing theoretical models still lack satisfying computational explanations from connectionist perspectives, especially for how the brain encodes body perception and generates illusions from neuronal interactions. Moreover, the integration of disability experiments is also neglected. Here, we integrate biological findings of bodily self-consciousness to propose a brain-inspired bodily self-perception model by which perceptions of bodily self are autonomously constructed without any supervision signals. We successfully validated the model with six RHI experiments and a disability experiment on an iCub humanoid robot and simulated environments. The results show that our model can not only well-replicate the behavioral and neural data of monkeys in biological experiments but also reasonably explain the causes and results of RHI at the neuronal level, thus contributing to the revelation of mechanisms underlying RHI.
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Affiliation(s)
- Yuxuan Zhao
- Brain-inspired Cognitive Intelligence Lab, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China
| | - Enmeng Lu
- Brain-inspired Cognitive Intelligence Lab, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China
| | - Yi Zeng
- Brain-inspired Cognitive Intelligence Lab, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China
- Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China
- School of Future Technology, University of Chinese Academy of Sciences, Beijing 100049, China
- School of Artificial Intelligence, University of Chinese Academy of Sciences, Beijing 100049, China
- Center for Long-term Artificial Intelligence, Beijing, China
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46
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Fitch WT. Cellular computation and cognition. Front Comput Neurosci 2023; 17:1107876. [PMID: 38077750 PMCID: PMC10702520 DOI: 10.3389/fncom.2023.1107876] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2022] [Accepted: 10/09/2023] [Indexed: 05/28/2024] Open
Abstract
Contemporary neural network models often overlook a central biological fact about neural processing: that single neurons are themselves complex, semi-autonomous computing systems. Both the information processing and information storage abilities of actual biological neurons vastly exceed the simple weighted sum of synaptic inputs computed by the "units" in standard neural network models. Neurons are eukaryotic cells that store information not only in synapses, but also in their dendritic structure and connectivity, as well as genetic "marking" in the epigenome of each individual cell. Each neuron computes a complex nonlinear function of its inputs, roughly equivalent in processing capacity to an entire 1990s-era neural network model. Furthermore, individual cells provide the biological interface between gene expression, ongoing neural processing, and stored long-term memory traces. Neurons in all organisms have these properties, which are thus relevant to all of neuroscience and cognitive biology. Single-cell computation may also play a particular role in explaining some unusual features of human cognition. The recognition of the centrality of cellular computation to "natural computation" in brains, and of the constraints it imposes upon brain evolution, thus has important implications for the evolution of cognition, and how we study it.
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Affiliation(s)
- W. Tecumseh Fitch
- Faculty of Life Sciences and Vienna Cognitive Science Hub, University of Vienna, Vienna, Austria
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47
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Pulvermüller F. Neurobiological mechanisms for language, symbols and concepts: Clues from brain-constrained deep neural networks. Prog Neurobiol 2023; 230:102511. [PMID: 37482195 PMCID: PMC10518464 DOI: 10.1016/j.pneurobio.2023.102511] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2022] [Revised: 05/02/2023] [Accepted: 07/18/2023] [Indexed: 07/25/2023]
Abstract
Neural networks are successfully used to imitate and model cognitive processes. However, to provide clues about the neurobiological mechanisms enabling human cognition, these models need to mimic the structure and function of real brains. Brain-constrained networks differ from classic neural networks by implementing brain similarities at different scales, ranging from the micro- and mesoscopic levels of neuronal function, local neuronal links and circuit interaction to large-scale anatomical structure and between-area connectivity. This review shows how brain-constrained neural networks can be applied to study in silico the formation of mechanisms for symbol and concept processing and to work towards neurobiological explanations of specifically human cognitive abilities. These include verbal working memory and learning of large vocabularies of symbols, semantic binding carried by specific areas of cortex, attention focusing and modulation driven by symbol type, and the acquisition of concrete and abstract concepts partly influenced by symbols. Neuronal assembly activity in the networks is analyzed to deliver putative mechanistic correlates of higher cognitive processes and to develop candidate explanations founded in established neurobiological principles.
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Affiliation(s)
- Friedemann Pulvermüller
- Brain Language Laboratory, Department of Philosophy and Humanities, WE4, Freie Universität Berlin, 14195 Berlin, Germany; Berlin School of Mind and Brain, Humboldt Universität zu Berlin, 10099 Berlin, Germany; Einstein Center for Neurosciences Berlin, 10117 Berlin, Germany; Cluster of Excellence 'Matters of Activity', Humboldt Universität zu Berlin, 10099 Berlin, Germany.
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48
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Yin K, Li J, Xiong Y, Zhu M, Tan Z, Jin Z. Simulating Synaptic Behaviors through Frequency Modulation in a Capacitor-Memristor Circuit. MICROMACHINES 2023; 14:2014. [PMID: 38004871 PMCID: PMC10673497 DOI: 10.3390/mi14112014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 10/20/2023] [Accepted: 10/27/2023] [Indexed: 11/26/2023]
Abstract
Memristors, known for their adjustable and non-volatile resistance, offer a promising avenue for emulating synapses. However, achieving pulse frequency-dependent synaptic plasticity in memristors or memristive systems necessitates further exploration. In this study, we present a novel approach to modulate the conductance of a memristor in a capacitor-memristor circuit by finely tuning the frequency of input pulses. Our experimental results demonstrate that these phenomena align with the long-term depression (LTD) and long-term potentiation (LTP) observed in synapses, which are induced by the frequency of action potentials. Additionally, we successfully implement a Hebbian-like learning mechanism in a simple circuit that connects a pair of memristors to a capacitor, resulting in observed associative memory formation and forgetting processes. Our findings highlight the potential of capacitor-memristor circuits in faithfully replicating the frequency-dependent behavior of synapses, thereby offering a valuable contribution to the development of brain-inspired neural networks.
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Affiliation(s)
- Kuibo Yin
- SEU-FEI Nano-Pico Center, Key Laboratory of MEMS of Ministry of Education, Southeast University, Nanjing 210096, China
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Madar A, Dong C, Sheffield M. BTSP, not STDP, Drives Shifts in Hippocampal Representations During Familiarization. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.10.17.562791. [PMID: 37904999 PMCID: PMC10614909 DOI: 10.1101/2023.10.17.562791] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/02/2023]
Abstract
Synaptic plasticity is widely thought to support memory storage in the brain, but the rules determining impactful synaptic changes in-vivo are not known. We considered the trial-by-trial shifting dynamics of hippocampal place fields (PFs) as an indicator of ongoing plasticity during memory formation. By implementing different plasticity rules in computational models of spiking place cells and comparing to experimentally measured PFs from mice navigating familiar and novel environments, we found that Behavioral-Timescale-Synaptic-Plasticity (BTSP), rather than Hebbian Spike-Timing-Dependent-Plasticity, is the principal mechanism governing PF shifting dynamics. BTSP-triggering events are rare, but more frequent during novel experiences. During exploration, their probability is dynamic: it decays after PF onset, but continually drives a population-level representational drift. Finally, our results show that BTSP occurs in CA3 but is less frequent and phenomenologically different than in CA1. Overall, our study provides a new framework to understand how synaptic plasticity shapes neuronal representations during learning.
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Affiliation(s)
- A.D. Madar
- Department of Neurobiology, Neuroscience Institute, University of Chicago
| | - C. Dong
- Department of Neurobiology, Neuroscience Institute, University of Chicago
- current affiliation: Department of Neurobiology, Stanford University School of Medicine
| | - M.E.J. Sheffield
- Department of Neurobiology, Neuroscience Institute, University of Chicago
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Vlasov D, Minnekhanov A, Rybka R, Davydov Y, Sboev A, Serenko A, Ilyasov A, Demin V. Memristor-based spiking neural network with online reinforcement learning. Neural Netw 2023; 166:512-523. [PMID: 37579580 DOI: 10.1016/j.neunet.2023.07.031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2022] [Revised: 04/28/2023] [Accepted: 07/24/2023] [Indexed: 08/16/2023]
Abstract
Neural networks implemented in memristor-based hardware can provide fast and efficient in-memory computation, but traditional learning methods such as error back-propagation are hardly feasible in it. Spiking neural networks (SNNs) are highly promising in this regard, as their weights can be changed locally in a self-organized manner without the demand for high-precision changes calculated with the use of information almost from the entire network. This problem is rather relevant for solving control tasks with neural-network reinforcement learning methods, as those are highly sensitive to any source of stochasticity in a model initialization, training, or decision-making procedure. This paper presents an online reinforcement learning algorithm in which the change of connection weights is carried out after processing each environment state during interaction-with-environment data generation. Another novel feature of the algorithm is that it is applied to SNNs with memristor-based STDP-like learning rules. The plasticity functions are obtained from real memristors based on poly-p-xylylene and CoFeB-LiNbO3 nanocomposite, which were experimentally assembled and analyzed. The SNN is comprised of leaky integrate-and-fire neurons. Environmental states are encoded by the timings of input spikes, and the control action is decoded by the first spike. The proposed learning algorithm solves the Cart-Pole benchmark task successfully. This result could be the first step towards implementing a real-time agent learning procedure in a continuous-time environment that can be run on neuromorphic systems with memristive synapses.
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Affiliation(s)
- Danila Vlasov
- NRC "Kurchatov Institute", Akademika Kurchatova sq., 1 Moscow, Russian Federation
| | - Anton Minnekhanov
- NRC "Kurchatov Institute", Akademika Kurchatova sq., 1 Moscow, Russian Federation
| | - Roman Rybka
- NRC "Kurchatov Institute", Akademika Kurchatova sq., 1 Moscow, Russian Federation; Russian Technological University "MIREA", Vernadsky av., 78 Moscow, Russian Federation.
| | - Yury Davydov
- NRC "Kurchatov Institute", Akademika Kurchatova sq., 1 Moscow, Russian Federation
| | - Alexander Sboev
- NRC "Kurchatov Institute", Akademika Kurchatova sq., 1 Moscow, Russian Federation; Russian Technological University "MIREA", Vernadsky av., 78 Moscow, Russian Federation; NRNU "MEPhi", Kashira Hwy, 31 Moscow, Russian Federation
| | - Alexey Serenko
- NRC "Kurchatov Institute", Akademika Kurchatova sq., 1 Moscow, Russian Federation
| | - Alexander Ilyasov
- NRC "Kurchatov Institute", Akademika Kurchatova sq., 1 Moscow, Russian Federation; Faculty of Physics, Lomonosov Moscow State University, Leninskie gory, 1 Moscow, Russian Federation
| | - Vyacheslav Demin
- NRC "Kurchatov Institute", Akademika Kurchatova sq., 1 Moscow, Russian Federation.
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