Dissecting microbial community structure and methane-producing pathways of a full-scale anaerobic reactor digesting activated sludge from wastewater treatment by metagenomic sequencing

Organic matter removal and CH4 production performance recoveries and microbial community changes in upflow anaerobic biofilter after long term starvation

The organic matter in municipal wastewater can be recovered by anaerobic biological treatment, making further resource utilization of municipal wastewater, which meets the requirements of sustainable development. An upflow anaerobic biofilter (UAF) treating municipal wastewater was established. The performances of stable operation and recovery operation of UAF after long-term starvation (234 days) and the changes of microbial community structure were researched. By gradually reducing HRT from 10 h to 4 h, the UAF achieved the treatment performance of pre-starvation after only 50 days recovery operation, in which total COD and soluble COD removal efficiencies reached 66 % and 69 %, respectively, and the CH4 production rate was 0.21 L CH4/g CODremoval. The recovery performance of UAF after long term starvation showed that the recovery sequence of three main anaerobic processes was hydrolytic acidification, hydrogen-acetate production and methanogenesis. High-throughput sequencing results indicated that dominant bacteria associated with hydrolytic acidification process changed from Moduliflexaceae and Trichococcus in stable operation stage to Trichococcus and Romboutsia in recovery stage. Besides, the dominant archaea changed from Methanosaeta (hydrotrophic methanogens) to Methanobacterium (acetotrophic methanogens), showing Methanobacterium was more resistant to starvation environment. Therefore, by using UAF for biological treatment of organic matter, even after a long period of starvation, the system would not be completely destroyed. Once it resumed operation, the treatment performance could be restored in a short period of time.

Enhancing methane production in two-phase anaerobic digestion of perishable organic waste: Mini-review on acidogenic fermentation pathways and regulatory strategies

Two-phase anaerobic digestion is a highly effective approach for efficient reduction and resource recovery of perishable organic waste. Within this technological framework, organic wastes undergo multiple metabolic pathways during the acidogenic phase, which is classified into ethanol, butyrate, propionate, lactate, and mixed acid fermentation depending on the acidification end products. The nature of these acidification products critically influences the performance of the subsequent methanogenic phase. Strategic regulation of operational parameters during the acidogenic phase fosters the enrichment of specific microbial communities and establishment of dominant consortia, which enable the production of the targeted acidification end-products. This review provides a comprehensive analysis of the metabolic characteristics and regulatory strategies associated with various acidogenic fermentation types and methanogenic properties of different acidification products. The findings presented here are crucial for enhancing the stability and methanogenic efficiency of anaerobic digestion systems that process perishable organic waste.

The components and aromaticity of dissolved organic matter derived from aquatic plants determine the CO2 and CH4 emission potential

Lakes are integral to the carbon cycle through the processing of dissolved organic matter (DOM). However, the specific contributions of various aquatic plants to carbon emissions during their decomposition remain inadequately understood. In this study, decomposition experiments were performed on three aquatic plants-algae, Phragmites australis (PA), and Potamogeton crispus L. (PC)-using advanced techniques, including FT-ICR-MS and metagenomics, to investigate the mechanisms of carbon dioxide (CO2) and methane (CH4) emissions. The results indicate that algae exhibit a substantial potential for CO2 emissions, with emissions reaching up to 2193 μmol·g-1. Conversely, PA contributes the highest CH4 emissions, reaching up to 2397 μmol·g-1. Factors such as the protein-like content and aromaticity of DOM molecules significantly influence emission levels. DOM with lower aromaticity undergoes easier decomposition in the first 6 days, leading to increased CO2 production. Elevated C/N and C/P ratios in plants enhance the abundance of methanogenic bacteria and genes. Surplus carbon will be mineralized under anaerobic conditions, giving rise to mineralization of organics to CH₄. These findings elucidate the mechanisms underlying CO2 and CH4 emissions during the decomposition of different aquatic plants and provide valuable insights for lake water environment management.

Comparative efficacy of anaerobic digestion systems in removing antimicrobial resistance genes from swine wastewater

Swine farm wastewater is a major reservoir of antimicrobial resistance genes (ARGs). Anaerobic digestion (AD), widely implemented in farms, has been extensively studied for ARG removal. However, a comparative study on ARG removal efficiency across the four principal AD systems - up-flow anaerobic sludge blanket (UASB), continuous stirred tank reactor (CSTR), buried biogas digester (BBD), and septic tank (SPT) - is lacking. Herein, we employed metagenomic sequencing, ultra-performance liquid chromatography-tandem mass spectrometry, as well as atomic absorption spectrometry/atomic fluorescence spectrophotometry, and revealed that UASB and CSTR achieved higher removal efficiencies for both ARGs (67% and 57%) and antibiotic residues (100% and 90%) compared to BBD and SPT. Acinetobacter, Escherichia, Pseudomonas and Streptococcus were the primary ARG hosts, comprising over 65% of the total abundance in influent samples. UASB and CSTR systems demonstrated superior removal efficiencies for both mobile genetic elements (MGEs) and antibiotic residues, both of which had essential impacts on ARG profiles. In addition, heavy metals might contribute to variation in ARGs through horizontal gene transfer. Collectively, the variation in microbial communities and better removal of both MGEs and antibiotic residues contribute to the remarkable ARG removal efficiency of UASB and CSTR, therefore, advocating for the widespread adoption of these two AD systems in swine farms.

Electrode functional microorganisms in bioelectrochemical systems and its regulation: A review

Bioelectrochemical systems (BES) as environmental remediation biotechnologies have boomed in the last two decades. Although BESs combined technologies with electro-chemistry, -biology, and -physics, microorganisms and biofilms remain at their core. In this review, various functional microorganisms in BESs for CO2 reduction, dehalogenation, nitrate, phosphate, and sulfate reduction, metal removal, and volatile organic compound oxidation are summarized and compared in detail. Moreover, interrelationship regulation approaches for functional microorganisms and methods for electroactive biofilm development, such as targeted electrode surface modification, chemical treatment, physical revealing, biological optimization, and genetic programming are pointed out. This review provides promising guidance and suggestions for the selection of microbial inoculants and provides an analysis of the role of individual microorganisms in mixed microbial communities and its metabolisms.

Analysis of biological treatment technologies, their present infrastructures and suitability for biodegradable food packaging - A review

Recently, there has been an increased demand for biodegradable plastics in the food packaging industry, especially for highly food soiled packaging items containing food/beverage solids that will not be recycled using a non-biological process. However, the increased usage of those materials have also raised concerns and confusion, as a major part of these biodegradable plastics are not effectively separated nor recycled. The lack of acceptance in recycling facilities, related to confusion with their conventional polymers counterparts, as well as short retention times of recycling facilities, often incompatible with the degradation kinetics of biodegradable plastics, stand as the major drawbacks for bioplastics treatment. Additionally, the presence of incompletely biodegraded bioplastics during biological treatments or in the final products i.e. compost or digestate, could lead to process failure or limit the commercialization of the compost. This work critically reviews the fundamentals of the biological treatments, anaerobic digestion and composting processes, and discusses the current strategies to improve their performance. In addition, this work summarizes the state-of-the-art knowledge and the impact of bioplastics on full-scale treatment plants. Finally, an overview of the current installed treatment capacity is given to show the areas of opportunity that can be improved and exploited to achieve a better waste management of biodegradable plastics.

Role of Methanosarcina in mercuric mercury transportation and methylation in sulfate-driven anaerobic oxidation of methane with municipal wastewater sludge

Sulfate-driven anaerobic oxidation of methane (AOM) and anaerobic digestion (AD) with municipal wastewater sludge containing heavy metals may provide favorable conditions for the biogeochemical transformation of mercury (Hg) by methanogens and methanotrophs. However, it remains largely unclear what Hg-methylators functioned and what role Methanosarcina played in these processes. Here, we performed sulfate-driven AOM following AD with Hg-containing wastewater sludge and investigated the role of microbes, especially Methanosarcina, in the biogeochemical transformation of Hg based on 16S rRNA amplicon and metatranscriptomic sequencing. Results showed that methylmercury (MeHg) concentrations and MeHg/total Hg ratios increased significantly, implying mercuric Hg [Hg(II)] methylation predominated MeHg demethylation. Desulfovibrio, Desulfobulbus and Methanosarcina dominated and thus likely played important roles in Hg(II) methylation, while Methanosarcina dominated and functioned in methane metabolism. In the presence of sulfate, differentially-expressed genes (DEGs) related to Hg transporting ATPase increased significantly, indicating Methanosarcina absorbed a large amount of Hg(II) and likely further methylated it to MeHg. No Hg response DEGs were found in the absence of sulfate, further confirming sulfate played an essential role in Hg cycle. Overall, these results suggest that controlling sulfate levels and Methanosarcina abundances in municipal wastewater could potentially mitigate MeHg risks to humans.

Impact of Silver and Copper Oxide Nanoparticles on Anaerobic Digestion of Sludge and Bacterial Community Structure

The effect of metal nanoparticles on the anaerobic digestion of sludge and the sludge bacterial community are still not well-understood, and both improvements and inhibitions have been reported. This study investigated the impact of 2, 10, and 30 mg/g TS silver and copper oxide nanoparticles (AgNPs and CuONPs) on the mesophilic anaerobic digestion of sludge and the bacterial community structure. The reactors were monitored for changes in tCOD, sCOD, TS, VS, biogas generation, and cell viability. Also, the relative abundance and taxonomic distribution of the bacterial communities were analyzed at the phylum and genus levels, including the genera involved in anaerobic digestion. Both AgNPs and CuONPs exhibited some inhibition on anaerobic digestion of sludge and biogas generation, and the inhibition was more evident at higher concentrations. CuONPs had a stronger inhibitory effect compared to AgNPs. After the introduction of AgNPs and CuONPs, cell viability initially decreased over the first two weeks but recovered after that. At high concentrations, AgNPs and CuONPs decreased the overall bacterial diversity, and inhibited the dominant bacterial species, allowing those in less abundance to flourish. The relative abundance of the bacteria responsible for hydrolysis and acidogenesis increased and the relative abundance of acetogenic bacteria decreased with higher AgNP and CuONP concentrations. The majority of the parameters measured for monitoring the anaerobic digestion performance and bacterial community were not statistically significant at 2 mg/g TS of AgNPs and CuONPs, which represents naturally present concentrations in wastewater sludge that are below the USEPA ceiling concentration limits.

The role of sulfidated zero-valent iron in enhancing anaerobic digestion of waste activated sludge

Zero-valent iron (ZVI) has been confirmed in enhancing methane production by improving interspecies electron transfer during anaerobic digestion (AD) of waste activated sludge (WAS). In this study, we suppose that sulfidated zero-valent iron (S-ZVI), a semiconductor material, has better property of electron transfer in AD process. Based on two-phase anaerobic digestion process, nitrite and S-ZVI were used separately for improving acidogenic phase and methanogenic phase of anaerobic sludge digestion. Based on XRD and XPS, Fe(Ⅱ)-O and Fe(Ⅲ)-O were substituted by Fe(Ⅱ)-S and Fe(Ⅲ)-S after ZVI sulfidation, which increased the electric conductivity of S-ZVI. Nyquist plot and Tafel corrosion curve showed that the sulfidation treatment can reduce impedance of electronic transmission. The results showed that the addition of S-ZVI increased methane production by 24.22% compared with ZVI alone. The addition of S-ZVI increased the relative abundance of Actinobacteria in R3(Raw + S-ZVI) and R6(NO2- + S-ZVI), enhancing the activity of microbial in anaerobic sludge digestion. The relative abundance of Acidobacteriota, Synergistota, WPS-2, Firmicutes, Caldisericota, and Gampylobactenota have changed markedly, and facilitated the activity of acidogenic microbes to produce more biodegradable organic matter, further boosting methane production. The findings of in-situ formation of S-ZVI in R5 anaerobic digestion saves the economic cost of S-ZVI preparation, which will be helpful for the extensive application of this technology.

Harnessing the Energy Potential and Value-Added Products from the Treatment of Sugarcane Vinasse: Maximizing Methane Production Through Co-Digestion with Sugarcane Molasses and Enhanced Organic Loading

This study assessed the impact of organic loading rate (OLR) on methane (CH4) production in the anaerobic co-digestion (AcoD) of sugarcane vinasse and molasses (SVM) (1:1 ratio) within a thermophilic fluidized bed reactor (AFBR). The OLR ranged from 5 to 27.5 kg COD.m-3.d-1, with a fixed hydraulic retention time (HRT) of 24 h. Organic matter removal varied from 56 to 84%, peaking at an OLR of 5 kg COD.m-3.d-1. Maximum CH4 yield (MY) (272.6 mL CH4.g-1CODrem) occurred at an OLR of 7.5 kg COD.m-3.d-1, while the highest CH4 production rate (MPR) (4.0 L CH4.L-1.d-1) and energy potential (E.P.) (250.5 kJ.d-1) were observed at an OLR of 20 kg COD.m-3.d-1. The AFBR exhibited stability across all OLR. At 22.5 kg COD.m-3.d-1, a decrease in MY indicated methanogenesis imbalance and inhibitory organic compound accumulation. OLR influenced microbial populations, with Firmicutes and Thermotogota constituting 43.9% at 7.5 kg COD.m-3.d-1, and Firmicutes dominating (52.7%) at 27.5 kg COD.m-3.d-1. Methanosarcina (38.9%) and hydrogenotrophic Methanothermobacter (37.6%) were the prevalent archaea at 7.5 kg COD.m-3.d-1 and 27.5 kg COD.m-3.d-1, respectively. Therefore, this study demonstrates that the organic loading rate significantly influences the efficiency of methane production and the stability of microbial communities during the anaerobic co-digestion of sugarcane vinasse and molasses, indicating that optimized conditions can maximize energy yield and maintain methanogenic balance.

Domestic sewage as a sustainable freshwater substitute for enhanced anaerobic digestion of lignocellulosic biomass

Biochemical methane potential tests using water hyacinth (WH), pretreated water hyacinth (PWH), and Hydrilla verticillata (HV) as substrates using sewage media were explored. This study replaced the freshwater required to prepare the slurry for AD of organic solid waste with domestic sewage. Cow dung was used as the inoculum. WH (241.5 mL CH4/g VSadded), PWH (200.5 mL CH4/g VSadded), and HV (212 mL CH4/g VSadded) produced significant amounts of methane in the sewage medium. 16S-rRNA analysis showed that, in sewage, ~ 85% of the microbes were hydrolytic bacteria, and 7% were methanogens. This abundant quantity of hydrolytic microbes from sewage accelerated lignin degradation, achieving 28.32% and 38.34% degradation for WH and HV, respectively, within 14 days. Field emission-scanning electron microscopy images visually confirmed the enhanced substrate degradation in the presence of sewage. The net energy produced from the AD of WH and HV was significant (4664 J/g VSadded and 4109 J/g VSadded), but for PWH, it was negative, indicating that using sewage medium may be better than costly pretreatment techniques. This study demonstrated the potential of using sewage as an alternative to freshwater in AD, offering a sustainable solution for freshwater conservation and the possible utilisation of sewage for improved methane production, especially for substrates with lignin that are difficult to degrade.

In-situ biological biogas upgrading using upflow anaerobic polyfoam bioreactor: Operational and biological aspects

A high rate upflow anaerobic polyfoam-based bioreactor (UAPB) was developed for lab-scale in-situ biogas upgrading by H2 injection. The reactor, with a volume of 440 mL, was fed with synthetic wastewater at an organic loading rate (OLR) of 3.5 g COD/L·day and a hydraulic retention time (HRT) of 7.33 h. The use of a porous diffuser, alongside high gas recirculation, led to a higher H2 liquid mass transfer, and subsequently to a better uptake for high CH4 content of 56% (starting from 26%). Our attempts to optimize both operational parameters (H2 flow rate and gas recirculation ratio, which is the total flow rate of recirculated gas over the total outlet of gas flow rate) were not initially successful, however, at a very high recirculation ratio (32) and flow rate (54 mL/h), a significant improvement of the hydrogen consumption was achieved. These operational conditions have in turn driven the methanogenic community toward the dominance of Methanosaetaceae, which out-competed Methanosarcinaceae. Nevertheless, highly stable methane production rates of 1.4-1.9 L CH4/Lreactor.day were observed despite the methanogenic turnover. During the different applied operational conditions, the bacterial community was especially impacted, resulting in substantial shifts of taxonomic groups. Notably, Aeromonadaceae was the only bacterial group positively correlated with increasing hydrogen consumption rates. The capacity of Aeromonadaceae to extracellularly donate electrons suggests that direct interspecies electron transfer (DIET) enhanced biogas upgrading. Overall, the proposed innovative biological in-situ biogas upgrading technology using the UAPB configuration shows promising results for stable, simple, and effective biological biogas upgrading.

Insights of energy potential in thermophilic sugarcane vinasse and molasses treatment: does two-stage codigestion enhance operational performance?

The study evaluated the performance of thermophilic co-digestion in both single-stage methanogenic reactors (TMR) and two-stage systems, consisting of a thermophilic acidogenic reactor and a thermophilic sequential methanogenic reactor (TSMR). A 1:1 mixture of sugarcane vinasse and molasses was codigested in anaerobic fluidized bed reactors, with varying organic matter concentrations based on chemical oxygen demand (COD) ranging from 5 to 22.5 g COD L-1. Both systems achieved high organic matter removal efficiency (51 to 86.5%) and similar methane (CH4) yields (> 148 mL CH4 g-1CODremoved). However, at the highest substrate concentration (22.5 g COD L-1), the TSMR outperformed the TMR in terms of energy generation potential (205.6 kJ d-1 vs. 125 kJ d-1). Phase separation in the two-stage system increased bioenergy generation by up to 43.5% at lower substrate concentrations (7.5 g COD L-1), with hydrogen (H2) generation playing a critical role in this enhancement. Additionally, the two-stage system produced value-added products, including ethanol (2.3 g L-1), volatile organic acids (3.2 g lactate L-1), and H2 (0.6-2.7 L H2 L-1 d-1). Microbial analysis revealed that Thermoanaerobacterium, Caldanaerobius, and Clostridium were dominant at 5 g COD L-1, while Lactobacillus prevailed at concentrations of ≥ 15 g COD L-1. The primary methane producers in the single-stage system were Methanosarcina, Methanoculleus, and Methanobacterium, whereas Methanothermobacter, Bathyarchaeia, and Methanosarcina dominated in the two-stage system.

Removal of organic matter from food wastewater using anaerobic digestion at low temperatures enhanced by exogenous signaling molecule N-hexanoyl-homoserine lactone enhancement: Insight to extracellular polymeric substances and key functional genes

This experiment aimed to study the effects of adding the exogenous signaling molecule N-hexanoyl-homoserine lactone (C6-HSL) on the anaerobic digestion of food wastewater at low temperature (15 °C). Daily addition of 0.4 μmol C6-HSL increased the average chemical oxygen demand removal from 45.98% to 94.92%, while intermittent addition (adding 2 μmol C6-HSL every five days) increased it from 45.98% to 72.44%. These two modes of C6-HSL addition increased protease and acetate kinase activity by 47.99%/8.04% and 123.26%/127.91% respectively, and increased coenzyme F420 concentrations by 15.79% and 63.16%, respectively. The regulation of loosely bound extracellular polymeric substances synthesis was influenced by C6-HSL, which increased protein and polysaccharide content in sludge. The relative abundance of Firmicutes and Bacteroidetes increased following addition of C6-HSL. After continuous addition of C6-HSL, the relative abundance of related functional genes such as amy, apgM, aceE, and accC increased, indicating that methanogens obtained sufficient substrate. The abundance of glycolysis-related functional genes such as glk, pfk, pgi, tpiA, gap, pgk, gpmA, eno, and pyk increased after the addition of C6-HSL, ensuring the efficient transformation and absorption of organic matter by anaerobic sludge at low temperatures. This study provides new comprehensive insights into the mechanism behind the enhancement of food wastewater anaerobic digestion by C6-HSL at low temperature.

Enhancing electron transfer in anaerobic process by supercapacitor materials: Polyaniline functionated activated carbon

Strengthening the direct interspecies electron transfer (DIET) is an effective strategy to improve the performance of anaerobic digestion (AD) process. In this study, the polyaniline functionated activated carbon (AC-PANi) was prepared by chemical oxidative polymerization. This material possessed pseudo-capacitance properties as well as excellent charge transfer capability. The experimental results demonstrated that the incorporation of AC-PANi in AD process could efficiently increase the chemical oxygen demand (COD) removal (18.6 %) and daily methane production rate (35.3 %). The AC-PANi can also act as an extracellular acceptor to promote the synthesis of adenosine triphosphate (ATP) and secretion of extracellular enzymes as well as cytochrome C (Cyt-C). The content of coenzyme F420 on methanogens was also shown to be increased by 60.9 % with the addition of AC-PANi in AD reactor. Overall, this work provides an easy but feasible way to enhance AD performance by promoting DIET between acetate-producing bacteria and methanogens.

Carbon flow, energy metabolic intensity and metagenomic characteristics of a Fe (III)-enhanced anerobic digestion system during treating swine wastewater

Deep treatment and bioenergy recovery of swine wastewater (SW) are beneficial for constructing a low-carbon footprint and resource-recycling society. In this study, Fe (III) addition from 0 to 600 mg/L significantly increased the methane (CH4) content of the recovered biogas from 61.4 ± 2.0 to 89.3 ± 2.0 % during SW treatment in an anaerobic membrane digestion system. The specific methane yields (SMY) also increased significantly from 0.20 ± 0.05 to 0.29 ± 0.02 L/g COD. Fe (III) and its bio-transformed products which participated in establishing direct interspecific electron transfer (DIET), upregulated the abundance of e-pili and Nicotinamide adenine dinucleotide (NADH), enriched electroactive bacteria. The increase in cellular adenosine triphosphate (cATP) from 6583 to 14,518 ng/gVSS and electron transport system (ETS) from 1468 to 1968 mg/(g·h) promoted the intensity of energy flow and electron flow during anaerobic digestion of SW. Moreover, Fe (III) promoted the hydrolysis and acidification of organic matters, and strengthened the acetoacetic methanogenesis pathway. This study established an approach for harvesting high quality bioenergy from SW and revealed the effects and mechanisms from the view of carbon flow, energy metabolic intensity and metagenomics.

Hydrogen production in microbial electrolysis cells with biocathodes

Electroautotrophic microbes at biocathodes in microbial electrolysis cells (MECs) can catalyze the hydrogen evolution reaction with low energy demand, facilitating long-term stable performance through specific and renewable biocatalysts. However, MECs have not yet reached commercialization due to a lack of understanding of the optimal microbial strains and reactor configurations for achieving high performance. Here, we critically analyze the criteria for the inocula selection, with a focus on the effect of hydrogenase activity and microbe-electrode interactions. We also evaluate the impact of the reactor design and key parameters, such as membrane type, composition, and electrode surface area on internal resistance, mass transport, and pH imbalances within MECs. This analysis paves the way for advancements that could propel biocathode-assisted MECs toward scalable hydrogen gas production.

Evaluation of the optimal sewage sludge pre-treatment technology through continuous reactor operation: Process performance and microbial community insights

This study investigated the impact of two low-temperature thermal pre-treatments on continuous anaerobic reactors' performance, sequentially fed with sludge of different total solids content (∼3 % and ∼6 %) and subjected to progressively increasing Organic Loading Rates (OLR) from 1.0 to 2.5 g volatile solids/(LReactor⋅day). Assessing pre-treatments' influence on influent sludge characteristics revealed enhanced organic matter hydrolysis, facilitating sludge solubilization and methanogenesis; volatile fatty acids concentration also increased, particularly in pre-treated sludge of ∼6 % total solids, indicating improved heating efficiency under increased solids content. The reactor fed with sludge pre-treated at 45 °C for 48 h and 55 °C for an extra 48 h exhibited the highest methane yield under all applied OLRs, peaking at 240 ± 3.0 mL/g volatile solids at the OLR of 2.5 g volatile solids/(LReactor⋅day). 16S rRNA gene sequencing demonstrated differences in the reactors' microbiomes as evidence of sludge thickening and the different pre-treatments applied, which promoted the release of organic matter in diverse concentrations and compositions. Finally, the microbial analysis revealed that specific foam-related genera increased in abundance in the foam layer of reactors' effluent bottles, dictating their association with the sludge foaming incidents that occurred inside the reactors during their operation at 2.0 g volatile solids/(LReactor⋅day).

Enhanced anaerobic digestion performance and sludge filterability by membrane microaeration for anaerobic membrane bioreactor application

Slow dissolution/hydrolysis of insoluble/macromolecular organics and poor sludge filterability restrict the application potential of anaerobic membrane bioreactor (AnMBR). Bubble-free membrane microaeration was firstly proposed to overcome these obstacles in this study. The batch anaerobic digestion tests feeding insoluble starch and soluble peptone with and without microaeration showed that microaeration led to a 65.7-144.8% increase in methane production and increased critical flux of microfiltration membrane via driving the formation of large sludge flocs and the resultant improvement of sludge settleability. The metagenomic and bioinformatic analyses showed that microaeration significantly enriched the functional genes and bacteria for polysaccharide and protein hydrolysis, microaeration showed little negative effects on the functional genes involved in anaerobic metabolisms, and substrate transfer from starch to peptone significantly affected the functional genes and microbial community. This study demonstrates the dual synergism of microaeration to enhance the dissolution/hydrolysis/acidification of insoluble/macromolecular organics and sludge filterability for AnMBR application.

A review on co-metabolic degradation of organic micropollutants during anaerobic digestion: Linkages between functional groups and digestion stages

The emerging presence of organic micropollutants (OMPs) in water bodies produced by human activities is a source of growing concern due to their environmental and health issues. Biodegradation is a widely employed treatment method for OMPs in wastewater owing to its high efficiency and low operational cost. Compared to aerobic degradation, anaerobic degradation has numerous advantages, including energy efficiency and superior performance for certain recalcitrant compounds. Nonetheless, the low influent concentrations of OMPs in wastewater treatment plants (WWTPs) and their toxicity make it difficult to support the growth of microorganisms. Therefore, co-metabolism is a promising mechanism for OMP biodegradation in which co-substrates are added as carbon and energy sources and stimulate increased metabolic activity. Functional microorganisms and enzymes exhibit significant variations at each stage of anaerobic digestion affecting the environment for the degradation of OMPs with different structural properties, as these factors substantially influence OMPs' biodegradability and transformation pathways. However, there is a paucity of literature reviews that explicate the correlations between OMPs' chemical structure and specific metabolic conditions. This study provides a comprehensive review of the co-metabolic processes which are favored by each stage of anaerobic digestion and attempts to link various functional groups to their favorable degradation pathways. Furthermore, potential co-metabolic processes and strategies that can enhance co-digestion are also identified, providing directions for future research.

Mitigation of Triclocarban Inhibition in Microbial Electrolysis Cell-Assisted Anaerobic Digestion

Triclocarban (TCC), as a widely used antimicrobial agent, is accumulated in waste activated sludge at a high level and inhibits the subsequent anaerobic digestion of sludge. This study, for the first time, investigated the effectiveness of microbial electrolysis cell-assisted anaerobic digestion (MEC-AD) in mitigating the inhibition of TCC to methane production. Experimental results showed that 20 mg/L TCC inhibited sludge disintegration, hydrolysis, acidogenesis, and methanogenesis processes and finally reduced methane production from traditional sludge anaerobic digestion by 19.1%. Molecular docking revealed the potential inactivation of binding of TCC to key enzymes in these processes. However, MEC-AD with 0.6 and 0.8 V external voltages achieved much higher methane production and controlled the TCC inhibition to less than 5.8%. TCC in the MEC-AD systems was adsorbed by humic substances and degraded to dichlorocarbanilide, leading to a certain detoxification effect. Methanogenic activities were increased in MEC-AD systems, accompanied by complete VFA consumption. Moreover, the applied voltage promoted cell apoptosis and sludge disintegration to release biodegradable organics. Metagenomic analysis revealed that the applied voltage increased the resistance of electrode biofilms to TCC by enriching functional microorganisms (syntrophic VFA-oxidizing and electroactive bacteria and hydrogenotrophic methanogens), acidification and methanogenesis pathways, multidrug efflux pumps, and SOS response.

Anaerobic co-digestion of microalgal biomass, sugarcane vinasse, and residual glycerol from biodiesel using simplex-centroid mixture design: methane potential, synergic effect, and microbial diversity

Microalgal biomass (MB) is a promising feedstock for bioenergy production. Nonetheless, the cell recalcitrance and the low C/N ratio limit the methane yield during anaerobic digestion. As an alternative to overcome these challenges, MB co-digestion with different feedstocks has been proposed. Thus, this study evaluated the anaerobic co-digestion (AcoD) of MB cultivated in wastewater with sugarcane vinasse (VIN) and residual glycerol from biodiesel production (GLY). Batch tests were conducted using augmented simplex-centroid mixture design to investigate the impact of AcoD on methane production (SMP), synergistic effects, and the influence on microbial community. When compared to MB digestion, 150 NmL CH4.g-1VS, binary and ternary AcoD achieved SMP increases from 120 to 337%. The combination of 16.7:16.7:66.7 (MB:VIN:GLY) showed the highest SMP for a ternary mixture (631 NmL CH4.g-1VS). Optimal synergies ranged from 1.3 to 1.4 and were primarily found for the MB:GLY AcoD. Acetoclastic Methanosaeta genus was predominant, regardless the combination between substrates. Despite the largest SMP obtained from the MB:GLY AcoD, other ternary mixtures were also highly synergetic and therefore had strong potential as a strategic renewable energy source.

Enhancement of methane production from anaerobic digestion of Erigeron canadensis via O2-nanobubble water supplementation

Malignant invasive Erigeron canadensis, as a typical lignocellulosic biomass, is a formidable challenge for sustainable and efficient resource utilization, however nanobubble water (NBW) coupled with anaerobic digestion furnishes a prospective strategy with superior environmental and economic effectiveness. In this study, influence mechanism of various O2-NBW addition times on methanogenic performance of E. canadensis during anaerobic digestion were performed to achieve the optimal pollution-free energy conversion. Results showed that supplementation of O2-NBW in digestion system could significantly enhance the methane production by 10.70-16.17%, while the maximum cumulative methane production reached 343.18 mL g-1 VS in the case of one-time O2-NBW addition on day 0. Furthermore, addition of O2-NBW was conducive to an increase of 2-90% in the activities of dehydrogenase, α-glucosidase and coenzyme F420. Simultaneously, both facultative bacteria and methanogenic archaea were enriched as well, further indicating that O2-NBW might be responsible for facilitating hydrolytic acidification and methanogenesis. Based on Kyoto Encyclopedia of Genes and Genomes (KEGG) cluster analysis, provision of O2-NBW enhanced the metabolism of carbohydrate and amino acid, translation as well as membrane transport of bacteria and archaea. This study might offer the theoretical guidance and novel insights for efficient recovery of energy from lignocellulosic biomass on account of O2-NBW adhibition in anaerobic digestion system, progressing tenor of carbon-neutral vision.

Incorporating saline microalgae biomass in anaerobic digester treating sewage sludge: Impact on performance and microbial populations

The aim of this study was to acclimate anaerobic prokaryotes to saline microalgae biomass. Semi-continuous experiments were conducted using two 1.5 L mesophilic reactors for 10 weeks, (hydraulic retention time of 21 days). The first reactor was solely fed with sewage sludge (control), while the second received a mixture of sewage sludge and microalgal biomass (80/20 %w/w) cultivated at 70 g·L-1 salinity. The in-reactor salinity reached after the acclimation phase was 14 g·L-1. Biomethane production was comparable between the control and acclimated reactors (205 ± 29 NmLMethane·gVolatileSolids-1). Salinity tolerance assessment of methanogenic archaea revealed that salinity causing 50% inhibition of methane production increased from 10 to 27 g·L-1 after acclimation. Microbial diversity analyses revealed notable changes in methanogenic archaea populations during co-digestion of saline microalgae biomass, particularly methylotrophic (+27%) and acetotrophic (-26%) methanogens. This study has highlighted the possibility of treating efficiently saline microalgae in co-digestion with sewage sludge in future industrial biogas plants.

Current status and future developments of assessing microbiome composition and dynamics in anaerobic digestion systems using metagenomic approaches

The metagenomic approach stands as a powerful technique for examining the composition of microbial communities and their involvement in various anaerobic digestion (AD) systems. Understanding the structure, function, and dynamics of microbial communities becomes pivotal for optimizing the biogas process, enhancing its stability and improving overall performance. Currently, taxonomic profiling of biogas-producing communities relies mainly on high-throughput 16S rRNA sequencing, offering insights into the bacterial and archaeal structures of AD assemblages and their correlations with fed substrates and process parameters. To delve even deeper, shotgun and genome-centric metagenomic approaches are employed to recover individual genomes from the metagenome. This provides a nuanced understanding of collective functionalities, interspecies interactions, and microbial associations with abiotic factors. The application of OMICs in AD systems holds the potential to revolutionize the field, leading to more efficient and sustainable waste management practices particularly through the implementation of precision anaerobic digestion systems. As ongoing research in this area progresses, anticipations are high for further exciting developments in the future. This review serves to explore the current landscape of metagenomic analyses, with focus on advancing our comprehension and critically evaluating biases and recommendations in the analysis of microbial communities in anaerobic digesters. Its objective is to explore how contemporary metagenomic approaches can be effectively applied to enhance our understanding and contribute to the refinement of the AD process. This marks a substantial stride towards achieving a more comprehensive understanding of anaerobic digestion systems.

Improved Formation of Biomethane by Enriched Microorganisms from Different Rank Coal Seams

The influence of enrichment of culturable microorganisms in in situ coal seams on biomethane production potential of other coal seams has been rarely studied. In this study, we enriched culturable microorganisms from three in situ coal seams with three coal ranks and conducted indoor anaerobic biomethane production experiments. Microbial community composition, gene functions, and metabolites in different culture units by 16S rRNA high-throughput sequencing combined with liquid chromatography-mass spectrometry-time-of-flight (LC-MS-TOF). The results showed that biomethane production in the bituminous coal group (BC)cc resulted in the highest methane yield of 243.3 μmol/g, which was 12.3 times higher than that in the control group (CK). Meanwhile, Methanosarcina was the dominant archaeal genus in the three experimental groups (37.42 ± 11.16-52.62 ± 2.10%), while its share in the CK was only 2.91 ± 0.48%. Based on the functional annotation, the relative abundance of functional genes in the three experimental groups was mainly related to the metabolism of nitrogen-containing heterocyclic compounds such as purines and pyrimidines. Metabolite analysis showed that enriched microorganisms promoted the degradation of a total of 778 organic substances in bituminous coal, including 55 significantly different metabolites (e.g., purines and pyrimidines). Based on genomic and metabolomic analyses, this paper reconstructed the heterocyclic compounds degradation coupled methane metabolism pathway and thereby preliminarily elucidated that enriched culturable bacteria from different coal-rank seams could promote the degradation of bituminous coal and intensify biogenic methane yields.

New insights into antibiotic stimulation of methane production during anaerobic digestion

Residual antibiotics in swine wastewater pose a critical challenge for stable anaerobic digestion (AD). This study offers fresh insights into the anaerobic treatment of swine wastewater. The results showed that the presence of three typical antibiotics (sulfamethoxazole (SMX), oxytetracycline (OTC) and ciprofloxacin (CIP)) in swine wastewater could promote methane production by stimulating the production and conversion of ethanol. Among them, SMX exhibited the strongest methane promotion effect, with the cumulative methane production increasing from 138.47 to 2204.19 mL/g VS. According to the microbial community structure, antibiotics could promote the growth of Corynebacterium, Lutispora and hydrogenotrophic methanogens (Methanosassiliicoccus, Methanobrevibacter, and Methanobacterium), but inhibit the enrichment of acetoclastic methanogen (Methanosaeta). The relative abundance of Methanosaeta decreased from 2.93-19.80% to 0.52-2.58% under antibiotic stress. Furthermore, there were significant differences in the influence of different antibiotic types on methanogenic pathways. Specifically, OTC and CIP promoted the acetoclastic and hydrogenotrophic pathways, respectively, to enhance methane production. However, SMX could promote both acetoclastic and hydrogenotrophic pathways.

Diversity of antibiotic resistance gene variants at subsequent stages of the wastewater treatment process revealed by a metagenomic analysis of PCR amplicons

Wastewater treatment plants have been recognised as point sources of various antibiotic-resistant bacteria (ARB) and antibiotic resistance genes (ARG) which are considered recently emerging biological contaminants. So far, culture-based and molecular-based methods have been successfully applied to monitor antimicrobial resistance (AMR) in WWTPs. However, the methods applied do not permit the comprehensive identification of the true diversity of ARGs. In this study we applied next-generation sequencing for a metagenomic analysis of PCR amplicons of ARGs from the subsequent stages of the analysed WWTP. The presence of 14 genes conferring resistance to different antibiotic families was screened by PCR. In the next step, three genes were selected for detailed analysis of changes of the profile of ARG variants along the process. A relative abundance of 79 variants was analysed. The highest diversity was revealed in the ermF gene, with 52 variants. The relative abundance of some variants changed along the purification process, and some ARG variants might be present in novel hosts for which they were currently unassigned. Additionally, we identified a pool of novel ARG variants present in the studied WWTP. Overall, the results obtained indicated that the applied method is sufficient for analysing ARG variant diversity.

Determination of effects of thermophilic and hyperthermophilic temperatures on anaerobic hydrolysis and acidogenesis of pig manure through a one-year study

Improving hydrolysis and acidogenesis through thermophilic and hyperthermophilic temperatures is critical for enhancing the anaerobic decomposition of organic waste like pig manure. However, whether higher temperatures can provide more enhanced performance has not been elucidated experimentally. This study, therefore, conducted a 375-day continuous operation experiment at 55 and 70 °C with a 5-day hydraulic retention time. The two temperature reactors entered a stable state after about 200 days and long-term microbial acclimation markedly changed their performances. In the thermophilic and hyperthermophilic reactor, the hydrolysis efficiencies were obtained at 29.7 % and 27.3 % respectively, whereas the acidogenesis efficiency was relatively low at 1.0 % and 3.1 %. Due to the occurrence of methanogenesis, the volatile fatty acid concentration in the thermophilic reactor was only 45 % of that in the hyperthermophilic reactor. The thermophilic reactor exhibited higher bacterial diversity; however, this difference between the two reactors apparently did not correlate with hydrolysis and acidogenesis performance.

Multi-omics analysis unravels effects of salt and oil on substance transformation, microbial community, and transcriptional activity in food waste anaerobic digestion

In this study, through quantitative detection of key substances and enzyme activities, an integrated analysis of 16S rRNA sequencing and metatranscriptomics revealed the mechanisms by which salt and oil influence the biotransformation process during anaerobic digestion (AD). The results demonstrated that a salt concentration of 6 g/L promoted lipid metabolism and hydrogenotrophic methanogenesis, while inhibiting the acetoclastic pathway. An oil concentration of 5 g/L facilitated the expression of key enzyme-encoding genes involved in β-oxidation of long-chain fatty acids, transcription, and acetoclastic methanogenesis. It also promoted the enrichment of syntrophic propionate/butyrate oxidation bacteria (Syntrophomonas and DMER64). Salt/oil co-addition enhanced the expression of genes related to glucose metabolism, amino acid metabolism, organic acid synthesis, and quorum sensing. Furthermore, salt/oil co-addition inhibited the secretion of key enzymes related to methanogens by impeding the transcription process. Collectively, these findings provide systematic insights into how salt and oil affect the biochemical metabolic mechanisms of AD.

Mechanism of microbial regulation on methane metabolism in saline-alkali soils based on metagenomics analysis

Saline-alkali soils constitute a globally important carbon pool that plays a critical role in soil carbon dioxide (CO2) and methane (CH4) fluxes. However, the relative importance of microorganisms in the regulation of CH4 emissions under elevated salinity remains unclear. Here, we report the composition of CH4 production and oxidation microbial communities under five different salinity levels in the Yellow River Delta, China. This study also obtained the gene number of microbial CH4 metabolism via testing the soil metagenomes, and further investigated the key soil factors to determine the regulation mechanism. Spearman correlation analysis showed that the soil electrical conductivity, salt content, and Na+, and SO42- concentrations showed significantly negative correlations with the CO2 and CH4 emission rates, while the NO2--N concentration and NO2-/NO3- ratio showed significantly positive correlations with the CO2 and CH4 emission rates. Metabolic pathway analysis showed that the mcrA gene for CH4 production was highest in low-salinity soils. By contrast, the relative abundances of the fwdA, ftr, mch, and mer genes related to the CO2 pathway increased significantly with rising salinity. Regarding CH4 oxidation processes, the relative abundances of the pmoA, mmoB, and mdh1 genes transferred from CH4 to formaldehyde decreased significantly from the control to the extreme-salinity plot. The greater abundance and rapid increase of methanotrophic bacteria compared with the lower abundance and slow increase in methanogenic archaea communities in saline-alkali soils may have increased CH4 oxidation and reduced CH4 production in this study. Only CO2 emissions positively affected CH4 emissions from low- to medium-salinity soils, while the diversities of CH4 production and oxidation jointly influenced CH4 emissions from medium- to extreme-salinity plots. Hence, future investigations will also explore more metabolic pathways for CH4 emissions from different types of saline-alkali lands and combine the key soil enzymes and regulated biotic or abiotic factors to enrich the CH4 metabolism pathway in saline-alkali soils.

Biogeochemical transformation of mercury driven by microbes involved in anaerobic digestion of municipal wastewater

Anaerobic digestion (AD) with municipal wastewater contained heavy metal mercury (Hg) highly affects the utilization of activated sludge, and poses severe threat to the health of human beings. However, the biogeochemical transformation of Hg during AD remains unclear. Here, we investigated the biogeochemical transformation and environmental characteristics of Hg and the variations of dominant microbes during AD. The results showed that Hg(II) methylation is dominant in the early stage of AD, while methylmercury (MeHg) demethylation dominates in the later stage. Dissolved total Hg (DTHg) in the effluent sludge decreased with time, while THg levels enhanced to varying degrees at the final stage. Sulfate significant inhibits MeHg formation, reduces bioavailability of Hg(II) by microbes and thus inhibits Hg(II) methylation. Microbial community analysis reveals that strains in Methanosarcina and Aminobacterium from the class of Methanomicrobia, rather than Deltaproteobacteria, may be directly related to Hg(II) methylation and MeHg demethylation. Overall, this research provide insights into the biogeochemical transformation of Hg in the anaerobic digestion of municipal wastewater treatment. This work is beneficial for scientific treatment of municipal wastewater and effluent sludge, thus reducing the risk of MeHg to human beings.

Integrating anaerobic acidification with two-stage forward osmosis concentration for simultaneously recovering organic matter, nitrogen and phosphorus from municipal wastewater

In order to meet the demand of municipal wastewater for low-carbon treatment and resource recovery, a novel process of anaerobic acidification membrane bioreactor (AAMBR) assisted with a two-stage forward osmosis (FO) (FO-AAMBR-FO) was developed for simultaneously recovering organic matter and nutrients from municipal wastewater. The results indicated that the first FO process concentrated the municipal wastewater to one tenth of the initial volume. The corresponding chemical oxygen demand (COD), ammonia nitrogen (NH4+-N) and total phosphorus (TP) concentration reached up to 2800, 200 and 33 mg/L, respectively. Subsequently, the AAMBR was operated at pH value of 10 for treating the concentration of municipal wastewater, in which the organic matter was successfully converted to acetic acid and propionic acid with a total volatile fatty acids (VFAs) concentration of 1787 mg COD/L and a VFAs production efficiency of 62.36 % during 47 days of stable operation. After that, the NH4+-N and TP concentration in the effluent of the AAMBR were further concentrated to 175 and 36.7 mg/L, respectively, by the second FO process. The struvite was successfully recovered with NH4+-N and TP recovery rate of 94.53 % and 98.59 %, respectively. Correspondingly, the VFAs, NH4+-N and TP concentrations in the residual solution were 2905 mg COD/L, 11.8 and 7.92 mg/L, respectively, which could be used as the raw material for the synthesis of polyhydroxyalkanoate (PHA). Results reported here demonstrated that the FO-AAMBR-FO is a promising wastewater treatment technology for simultaneous recovery of organic matter (in form of VFAs) and nutrients (in form of struvite).

Microbiome Diversity of Anaerobic Digesters Is Enhanced by Microaeration and Low Frequency Sound

Biogas is produced by a consortium of bacteria and archaea. We studied how the microbiome of poultry litter digestate was affected by time and treatments that enhanced biogas production. The microbiome was analyzed at six, 23, and 42 weeks of incubation. Starting at week seven, the digesters underwent four treatments: control, microaeration with 6 mL air L-1 digestate per day, treatment with a 1000 Hz sine wave, or treatment with the sound wave and microaeration. Both microaeration and sound enhanced biogas production relative to the control, while their combination was not as effective as microaeration alone. At week six, over 80% of the microbiome of the four digesters was composed of the three phyla Actinobacteria, Proteobacteria, and Firmicutes, with less than 10% Euryarchaeota and Bacteroidetes. At week 23, the digester microbiomes were more diverse with the phyla Spirochaetes, Synergistetes, and Verrucomicrobia increasing in proportion and the abundance of Actinobacteria decreasing. At week 42, Firmicutes, Bacteroidetes, Euryarchaeota, and Actinobacteria were the most dominant phyla, comprising 27.8%, 21.4%, 17.6%, and 12.3% of the microbiome. Other than the relative proportions of Firmicutes being increased and proportions of Bacteroidetes being decreased by the treatments, no systematic shifts in the microbiomes were observed due to treatment. Rather, microbial diversity was enhanced relative to the control. Given that both air and sound treatment increased biogas production, it is likely that they improved poultry litter breakdown to promote microbial growth.

Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater

Anaerobic digestion of municipal mixed sludge produces methane that can be converted into renewable natural gas. To improve economics of this microbial mediated process, metabolic interactions catalyzing biomass conversion to energy need to be identified. Here, we present a two-year time series associating microbial metabolism and physicochemistry in a full-scale wastewater treatment plant. By creating a co-occurrence network with thousands of time-resolved microbial populations from over 100 samples spanning four operating configurations, known and novel microbial consortia with potential to drive methane production were identified. Interactions between these populations were further resolved in relation to specific process configurations by mapping metagenome assembled genomes and cognate gene expression data onto the network. Prominent interactions included transcriptionally active Methanolinea methanogens and syntrophic benzoate oxidizing Syntrophorhabdus, as well as a Methanoregulaceae population and putative syntrophic acetate oxidizing bacteria affiliated with Bateroidetes (Tenuifilaceae) expressing the glycine cleavage bypass of the Wood-Ljungdahl pathway.

Conservation tillage practices affect soil microbial diversity and composition in experimental fields

Introduction

Conservation tillage is a widely used technique worldwide, but the effects of conservation tillage on bacterial community structure are poorly understood. We explored proportional alterations in the bacterial community under different tillage treatments.

Methodology

Hence, this study utilized high-throughput sequencing technique to investigate the structure and assembly processes of microbial communities in different tillage treatments.

Results and discussion

Tillage treatments included tillage no-straw retention (CntWt), no-tillage with straw retention (CntWntS), tillage with straw retention (CntWtS), no-tillage and no-straw retention (CntWnt). The influence of tillage practices on soil bacterial communities was investigated using Illumina MiSeq sequencing. Different tillage methods and straw retention systems significantly influenced soil parameters such as total potassium and pH were not affected by tillage practices, while straw retention significantly affected soil parameters including nitrogen content, available phosphorus and available potassium. Straw retention decreased bacterial diversity while increased bacterial richness. The effect of straw retention and tillage on bacterial communities was greater than with no tillage. Phylogenetic β-diversity analysis showed that deterministic homogeneous selection processes were dominated, while stochastic processes were more pronounced in tillage without straw retention. Ecological network analysis showed that microbial community correlation was increased in CntWntS and CntWnt. Straw retention treatment significantly increased the relative abundance of bacterial taxa Proteobacteria, Bacteroidetes, and OD1, while Nitrospirae, Actinobacteria, and Verrucomicrobia significantly decreased.

Conclusion

The conservation tillage practices significantly affect soil properties, bacterial composition, and assembly processes; however, further studies are required to investigate the impact of different crops, tillage practices and physiological characteristics on bacterial community structure and functions.

Mitigation of N2O emissions via enhanced denitrification in a biological landfill leachate treatment using external carbon from fermented sludge

The effects of an external carbon source (C-source) on the mitigation of N₂O gas (N₂O_(g)) emissions from landfill leachate were investigated via enhanced denitrification using anaerobically fermented sewage sludge. Anaerobic fermentation of sewage sludge was conducted under thermophilic conditions with progressively increasing organic loading rates (OLR). Optimal conditions for fermentation were determined based on the efficiency of hydrolysis and the concentrations of sCOD and volatile fatty acids (VFAs) as follows: at an OLR of 40.48 ± 0.77 g COD/L·d with 1.5 days of solid retention time (SRT), 14.68 ± 0.59% of efficiency of hydrolysis, 14.42 ± 0.30 g sCOD/L and 7.85 ± 0.18 g COD/L of VFAs. Analysis of the microbial community in the anaerobic fermentation reactor revealed that degradation of sewage sludge might be potentially affected by proteolytic microorganisms producing VFAs from proteinaceous materials. Sludge-fermentate (SF) retrieved from the anaerobic fermentation reactor was used as the external C-source for denitrification testing. The specific nitrate removal rate (K_NR) of the SF-added condition was 7.54 mg NO₃^-N/g VSS·hr, which was 5.42 and 2.43 times higher than that of raw landfill leachate (LL) and a methanol-added condition, respectively. In the N₂O_(g) emission test, the liquid phase N₂O (N₂O-^N_(l)) of 20.15 mg N/L was emitted as N₂O_(g) of 19.64 ppmv under only LL-added condition. On the other hand, SF led to the specific N₂O_(l) reduction rate (K_N2O) of 6.70 mg N/g VSS hr, resulting in mitigation of 1.72 times the N₂O_(g) emission compared to under the only-LL-added condition. The present study revealed that N₂O_(g) emissions from biological landfill leachate treatment plants can be attenuated by simultaneous reduction of NO₃^-N and N₂O_(l) during enhanced denitrification via a stable supply of an external C-source retrieved from anaerobically fermented organic waste.

Potential methanogenic and degradation of nonylphenol ethoxylate from domestic sewage: unravelling the essential roles of nutritional conditions and microbial community

Nonylphenol ethoxylathe (NPEO) is a non-ionic surfactant of increasing concern, used in the formulation of laundry detergents and is frequently found in aquatic environments. The purpose of this study was to evaluate the effects of yeast extract (YE) and sodium fumarate (SF) in NPEO removal from domestic sewage under anaerobic conditions via central composite rotatable design (CCRD) and response surface methodology (RSM). Experiments were designed by varying concentrations of NPEO (1.6-5.8 mg L^-1), YE (131.8-468.2 mg L^-1) and SF (97.7-602.3 mg L^-1) in batch reactors. SF and YE addition significantly influenced NPEO removal and CH₄ production. Optimal values of YE (400 mg L^-1) and SF (200 mg L^-1) result in removal efficiency of 97% for 5 mg L^-1 of NPEO, being mostly removed by biodegradation (86%). Meanwhile COD removal was 95% and methane yield was 134 ± 4 NmLCH₄ g^-¹COD_removed. The most abundant Bacteria genus identified were Macellibacteroides, Longilinea, Petrimonas and Proteiniphilum, while for Archaea, Methanosaeta and Methanoregula were the genera identified in higher relative abundances in optimized conditions.

Evaluation of sludge anaerobic fermentation driving partial denitrification capability: In view of kinetics and metagenomic mechanisms

Partial denitrification (PD) provides a promising approach of efficient and stable nitrite (NO₂^--N) generation for annamox. In this study, the feasibility of short-term sludge anaerobic fermentation driving PD was evaluated. It was found that a higher NO₂^--N accumulation in nitrate (NO₃^--N) reduction was obtained with the 5-days fermented sludge compared to 8 and 15-days fermentation. Moreover, compared to acetate as carbon source, sludge fermentation products (SFPs) induced the higher NO₂^--N production with nitrate-to-nitrite transformation ratio (NTR) nearly 100 %. Denitrification activity of fermented sludge were obviously improved with SFPs as electron donor. Metagenomic analysis revealed that Thauera was the dominant bacteria, which was assumed to be the key contributor to PD performance by harboring the highest narGHI and napAB but much lower nirS and nirK. Under the conditions of SFPs and fermented sludge, Thauera was speculated to have higher resistance than other denitrifiers attributed to versatile carbon metabolic capabilities utilizing SFPs with the significantly improved genes for metabolism of complex organic carbon via glycolysis after anaerobic fermentation. A novel integration of sludge fermentation driving PD and anammox for mainstream wastewater treatment and sidestream polishing was proposed to offer a promising application with reduced commercial carbon source consumption and waste sludge reduction.

Performance and mechanisms of medium-chain fatty acid production by anaerobic fermentation of food waste without external electron donors

This study performed a long-term operation to achieve efficient medium-chain fatty acids (MCFAs) production by anaerobic fermentation of food waste without external electron donors. The results show that total MCFAs reached the highest concentration of 29,886.10 mg COD/L, and n-caproate was the primary product, reaching the current maximum concentration of 28,191.66 mg COD/L. Microbial composition analysis demonstrated Lactobacillus, Bifidobacterium, Sporanaerobacter, and Caproiciproducens constituted the core community throughout the process. Metagenomic analysis suggested that two pathways, reverse β-oxidization (RBO) and fatty acid biosynthesis (FAB), were observed, and the FAB pathway was the main CE pathway. Unclassified_f_Ruminococcaceae and Limosilactobacillus were the main participants in the FAB pathway. This study is expected to provide new insights into MCFAs production from organic waste.

Biobased volatile fatty acids (VFA) production via anaerobic acidogenesis of sugar processing industry effluent

Rapid industrialization and unscientific disposal of industrial wastewaters have resulted in the pollution of water bodies and deterioration of water quality all over the globe. Valorization of industrial wastewaters will help in reducing the negative impact on the environment and will add value to the waste. The present study targets utilization of sugar processing industrial effluent for bio-based production of Volatile fatty acids (VFA) through anaerobic acidogenesis. Batch studies conducted to determine the VFA production potential of sugar processing industry effluent resulted in the VFA yield of 0.70 g/g COD utilized. Further continuous VFA production system was developed and optimization of Organic loading rate (OLR) (2-22 g COD/L^·day) was carried out with constant Hydraulic retention time (HRT) of 1 day. The continuous reactors studies resulted in a maximum VFA yield of 0.72 g/g COD utilized and productivity of 11.04 g COD/L·day at OLR of 14 g COD/L^·day and 22 g COD/L^·day, respectively. The developed process will provide an environmentally safe and efficient method for the conversion of complex industrial wastes to valuable products such as VFA.

Response of methanogenic system to long-term polycyclic aromatic hydrocarbon exposure: Adsorption and biodegradation, performance variation, and microbial function assessment

Phenanthrene (PHE) as a typical polycyclic aromatic hydrocarbon (PAH) is prevalent and harmful to organisms in petroleum-polluted sites. The effects of PHE concentration levels on performance, microbial community and functions in methanogenic system were comprehensively investigated by an operation of UASB reactor (198 days) and a series of batch tests. The results found that PHE was prone to accumulate in reactor by sludge adsorption (Final concentration = 12.53 mg/g TS Sludge), which posed significant influences on methanogenic system. The removal of chemical oxygen demand (COD), NH₄⁺-N and volatile fatty acids (VFAs) in reactor were reduced with PHE accumulation. Meanwhile, microbes with higher ATPase secrete more EPS activity to self-protect against PHE toxicity. Sequencing analysis showed that PHE interfered significantly diversity and structure of microbial community. For bacteria, PHE was toxic to Bacteroidetes and Latescibacteria, while syntrophs (f_Syntrophaceae, Syntrophorhabdus, etc.) involved in VFAs oxidation and aromatic organics degradation were tolerant of PHE stress. For archaea, acetoclastic methanogens (Methanosaeta) abundance was continuously diminished by 45.1% under long-term PHE exposure. Further functions analysis suggested that microbial community accelerated amino acid metabolism, energy metabolism and xenobiotics biodegradation & metabolism to satisfy physiological demanding under PHE stress. Combining batch tests of methanogenic metabolism proved that acetoclastic methanogenesis was negatively affected by PHE due to inhibition of functional enzymes (acetate kinase, phosphate acetyltransferase, etc.) expression. These findings may provide the basis for enhancing bioremediation of PAH pollution in anaerobic environment.

Mechanism insights into enhanced treatment of wasted activated sludge by hydrogen-mediated anaerobic digestion

In the current study, different forms of added gas including H₂, CO₂, and mixed gas (V_H2:V_CO2 = 4:1), as well as different hydrogen partial pressures (0.10, 0.30, and 0.50 atm) were investigated for the influence on anaerobic performance in waste activated sludge (WAS) treatment. The mixed gas significantly improved methane production by over 20%, which positively correlated with the hydrogen partial pressure. However, pure H₂ (0.5 atm) heavily inhibited methane production by 76.5%. Combined with the microbial metabolic activity study, H₂ accelerated the hydrolysis process. Afterward, mixing with CO₂ accelerated H₂ and organic consumption, thus promoting WAS degradation and methane production. Based on the most extra release of organics, the mixed group exerted the superior performance with hydrogen partial pressure at 0.3 atm. The microbial community analysis evidenced that mixed gas enriched proteolytic and homoacetogenic bacteria and hybrid-trophic methanogens. By metagenomics study, hydrolysis, acetogenic, and methanogenesis pathways were all enhanced via the exogenous addition of H₂ and CO₂, sustainably transforming WAS towards CH₄. This study discovered the mechanism of the enhanced conversion from WAS to CH₄ by exogenous H₂ and provided a promising approach for WAS reduction and energy recovery.

Multi-faceted analysis of thermophilic anaerobic biodegradation of poly(lactic acid)-based material

Currently, the production of bio-based polymeric materials, of which poly(lactic acid) (PLA) is the most popular, has been increasing, causing the growth of PLA waste in municipal waste. Thus, it is necessary to develop sustainable methods for treating it. Methane production, resulting from anaerobic digestion (AD), is a potential end-of-life scenario for PLA waste that needs to be investigated. To obtain high efficiency of AD, thermophilic fermentation was applied, and to overcome low rates of biodegradation, hydrothermal (HT) and alkaline (A) pretreatments were used. For a deep insight into the process, differential scanning calorimetry (DSC), Fourier-transform infrared spectroscopy (FTIR), and microscopic and microbial analyses (based on 16S rDNA) were applied. For both untreated (PLA) and pretreated (PLA_HT, PLA_A) samples a high maximal methane production (MP) of 453 L/kg volatile solids (VS) was obtained, almost 100 % of the theoretical methane yield from PLA. The use of pretreatment allowed shortening of the time for obtaining maximal MP, especially the hydrothermal pretreatment, which shortened the overall time of MP 1.3-fold, and methane was produced at an almost 10 % higher rate (8.35 vs 7.79 L/(kg VS·d)). However, DSC and microscopic analyses revealed that, in all cases, methane was intensively produced i) after the reduction of the molecular mass of the PLA material and ii) also when PLA pieces were not visible. This should be considered when designing the operational time for the AD process. Parallel to the gradual biodegradation of PLA, the abundances of Firmicutes, Thermotogae, and Euryarcheota increased. With PLA_HT, Syntrophobacteraceae, Thermoanaerobacteraceae, and methanogens were identified as potential key thermophilic PLA biodegraders.

Microbial diversity across compartments in an aquaponic system and its connection to the nitrogen cycle

Aquaponics combines hydroponic crop production with recirculating aquaculture. These systems comprise various compartments (fish tank, biofilter, sump, hydroponic table, radial flow settler and anaerobic digester), each with their own specific environmental pressures, which trigger the formation of unique microbial communities. Triplicated aquaponic systems were used to investigate the microbial community composition during three lettuce growing cycles. The sampling of individual compartments allowed community patterns to be generated using amplicon sequencing of bacterial and archaeal 16S rRNA genes. Nitrifying bacteria were identified in the hydroponic compartments, indicating that these compartments may play a larger role than previously thought in the system's nitrogen cycle. In addition to the observed temporal changes in community compositions within the anaerobic compartment, more archaeal reads were obtained from sludge samples than from the aerobic part of the system. Lower bacterial diversity was observed in fresh fish feces, where a highly discrete gut flora composition was seen. Finally, the most pronounced differences in microbial community compositions were observed between the aerobic and anaerobic loops of the system, with unique bacterial compositions in each individual compartment.

Biochemical methane potential and active microbial communities during anaerobic digestion of biodegradable plastics at different inoculum-substrate ratios

The influence of the inoculum-substrate ratio (ISR) on the mesophilic and thermophilic biochemical methane potential test of two biodegradable plastics was evaluated. Poly(lactic acid) (PLA) and polyhydroxybutyrate (PHB) were selected for this study, the first for being recalcitrant to mesophilic anaerobic digestion (AD) and the second, by contrast, for being readily biodegradable. Several ISRs, calculated on the basis of volatile solids (VS), were tested: 1, 2, 2.85, 4, and 10 g(VS of inoculum).g(VS of substrate)^-1. A high ISR was associated with an enhanced methane production rate (i.e., biodegradation kinetics). However, the ultimate methane production did not change, except when inhibition was observed. Indeed, applying the lowest ISR to readily biodegradable plastics such as PHB resulted in inhibition of methane production. Based on these experiments, in order to have reproducible degradation kinetics and optimal methane production, an ISR between 2.85 and 4 is recommended for biodegradable plastics. The active microbial communities were analyzed, and the active bacteria differed depending on the plastic digested (PLA versus PHB) and the temperature of the process (mesophilic versus thermophilic). Previously identified PHB degraders (Ilyobacter delafieldii and Enterobacter) were detected in PHB-fed reactors. Thermogutta and Tepidanaerobacter were detected during the thermophilic AD of PLA, and they are probably involved in PLA hydrolysis and lactate conversion, respectively.

The role of microbial ecology in improving the performance of anaerobic digestion of sewage sludge

The use of next-generation diagnostic tools to optimise the anaerobic digestion of municipal sewage sludge has the potential to increase renewable natural gas recovery, improve the reuse of biosolid fertilisers and help operators expand circular economies globally. This review aims to provide perspectives on the role of microbial ecology in improving digester performance in wastewater treatment plants, highlighting that a systems biology approach is fundamental for monitoring mesophilic anaerobic sewage sludge in continuously stirred reactor tanks. We further highlight the potential applications arising from investigations into sludge ecology. The principal limitation for improvements in methane recoveries or in process stability of anaerobic digestion, especially after pre-treatment or during co-digestion, are ecological knowledge gaps related to the front-end metabolism (hydrolysis and fermentation). Operational problems such as stable biological foaming are a key problem, for which ecological markers are a suitable approach. However, no biomarkers exist yet to assist in monitoring and management of clade-specific foaming potentials along with other risks, such as pollutants and pathogens. Fundamental ecological principles apply to anaerobic digestion, which presents opportunities to predict and manipulate reactor functions. The path ahead for mapping ecological markers on process endpoints and risk factors of anaerobic digestion will involve numerical ecology, an expanding field that employs metrics derived from alpha, beta, phylogenetic, taxonomic, and functional diversity, as well as from phenotypes or life strategies derived from genetic potentials. In contrast to addressing operational issues (as noted above), which are effectively addressed by whole population or individual biomarkers, broad improvement and optimisation of function will require enhancement of hydrolysis and acidogenic processes. This will require a discovery-based approach, which will involve integrative research involving the proteome and metabolome. This will utilise, but overcome current limitations of DNA-centric approaches, and likely have broad application outside the specific field of anaerobic digestion.

Influence of lactate to acetate ratio on biological production of medium chain carboxylates via open culture fermentation

Waste valorisation via biological production of widely used in the industry medium chain carboxylates (MCCs) via open culture fermentation (OCF) could be a promising alternative to the commonly used anaerobic digestion. Lactate-rich waste streams are considered as valuable substrates for carboxylate chain elongation (CE), however, there are certain limitations related to the production efficiency. Acetate produced and accumulated in the acetogenesis plays an important role in CE, i.e. acetate is elongated to butyrate and then to caproate which is most popular MCC. Henceforth, it was investigated whether the ratio of lactate to acetate (L:A) affected carboxylates yields and product distribution in the lactate-based CE in OCF. The tested L:A ratios influenced carboxylates selectivity in batch trials. In the ones with lactate as the sole carbon source, propionate production was predominant but when a higher relative acetate concentration was used, the production of butyrate and CE to caproate was favored. The co-utilization of lactate and acetate in a continuous process increased the production of butyrate and caproate compared to the phase with lactate as the sole carbon source, however, controlling the relative concentration of lactate and acetate during co-utilization was not an effective strategy for increasing caproate production. 16S rRNA gene amplicon reads mapping to Caproiciproducens were the most abundant in samples collected throughout the continuous processes regardless of the L:A ratios.

Cultivation of Lemna Minor on Industry-Derived, Anaerobically Digested, Dairy Processing Wastewater

The growth and nutrient uptake capacity of a common duckweed (Lemnaceae) species, Lemna minor "Blarney", on dairy processing wastewater pre-treated by an anaerobic digester (AD-DPW) was explored. L. minor was cultivated in small stationary vessels in a controlled indoor environment, as well as in a semi-outdoor 35 L recirculatory system. The use of AD-DPW as a cultivation medium for L. minor offers a novel approach to dairy wastewater treatment, evolving from the current resource-intensive clean-up of wastewaters to duckweed-based valorisation, simultaneously generating valuable plant biomass and remediating the wastewater.

Impact of combined biological hydrolysis and anaerobic digestion temperatures on the characteristics of bacterial community and digestate quality in the treatment of wastewater sludge

This work investigated the impact of temperature on the digestate water quality and bacterial community in the treatment of wastewater sludge using biological hydrolysis (BH)-anaerobic digestion (AD). The results showed that the BH 55 °C followed by AD 35 °C or 42 °C was the optimal temperature combination in terms of methane yield and digestate water quality. High-throughput sequencing revealed the key differences in bacterial communities for different BH-AD temperature combinations. Microbial source tracking showed only minor microbial migration from raw sludge and BH pre-treated sludge to the AD stage. Strong correlations between the residual sCOD, BH-AD temperature conditions, and dominant bacteria were identified. Clostridiales, Bacteroidales, Cloacimonadales, Thermotogales, and Anaerolineales were closely related to the digestate water quality and methane yield. Overall, the results showed that AD temperature exerted a dominant impact on methane yield, digestate water quality, and bacterial compositions in the BH-AD of wastewater sludge.