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Bai X, Bol R, Chen H, Cui Q, Qiu T, Zhao S, Fang L. A meta-analysis on crop growth and heavy metals accumulation with PGPB inoculation in contaminated soils. JOURNAL OF HAZARDOUS MATERIALS 2024; 471:134370. [PMID: 38688214 DOI: 10.1016/j.jhazmat.2024.134370] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2024] [Revised: 04/08/2024] [Accepted: 04/18/2024] [Indexed: 05/02/2024]
Abstract
Plant growth-promoting bacteria (PGPB) offer a promising solution for mitigating heavy metals (HMs) stress in crops, yet the mechanisms underlying the way they operate in the soil-plant system are not fully understood. We therefore conducted a meta-analysis with 2037 observations to quantitatively evaluate the effects and determinants of PGPB inoculation on crop growth and HMs accumulation in contaminated soils. We found that inoculation increased shoot and root biomass of all five crops (rice, maize, wheat, soybean, and sorghum) and decreased metal accumulation in rice and wheat shoots together with wheat roots. Key factors driving inoculation efficiency included soil organic matter (SOM) and the addition of exogenous fertilizers (N, P, and K). The phylum Proteobacteria was identified as the keystone taxa in effectively alleviating HMs stress in crops. More antioxidant enzyme activity, photosynthetic pigment, and nutrient absorption were induced by it. Overall, using PGPB inoculation improved the growth performance of all five crops, significantly increasing crop biomass in shoots, roots, and grains by 33 %, 35 %, and 20 %, respectively, while concurrently significantly decreasing heavy metal accumulation by 16 %, 9 %, and 37 %, respectively. These results are vital to grasping the benefits of PGPB and its future application in enhancing crop resistance to HMs.
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Affiliation(s)
- Xiaohan Bai
- College of Soil and Water Conservation Science and Engineering, Northwest A&F University, 712100 Yangling, China
| | - Roland Bol
- Institute of Bio‑ and Geosciences, Agrosphere (IBG-3), Forschungszentrum Jülich, Wilhelm Johnen Str, 52425 Jülich, Germany
| | - Hansong Chen
- College of Xingzhi, Zhejiang Normal University, Jinhua 321000, China
| | - Qingliang Cui
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Chinese Academy of Sciences, Ministry of Water Resources, 712100 Yangling, China
| | - Tianyi Qiu
- College of Natural Resources and Environment, Northwest A&F University, 712100 Yangling, China
| | - Shuling Zhao
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Chinese Academy of Sciences, Ministry of Water Resources, 712100 Yangling, China
| | - Linchuan Fang
- College of Soil and Water Conservation Science and Engineering, Northwest A&F University, 712100 Yangling, China; Key Laboratory of Green Utilization of Critical Non-metallic Mineral Resources, Ministry of Education, Wuhan University of Technology, 430070 Wuhan, China.
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Sharma N, Yadav G, Tyagi J, Kumar A, Koul M, Joshi NC, Hashem A, Abd_Allah EF, Mishra A. Synergistic impact of Serendipita indica and Zhihengliuella sp. ISTPL4 on the mitigation of arsenic stress in rice. Front Microbiol 2024; 15:1374303. [PMID: 38868093 PMCID: PMC11168111 DOI: 10.3389/fmicb.2024.1374303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2024] [Accepted: 05/06/2024] [Indexed: 06/14/2024] Open
Abstract
Arsenic (As) is a highly toxic metal that interferes with plant growth and disrupts various biochemical and molecular processes in plants. In this study, the harmful effects of As on rice were mitigated using combined inoculation of a root endophyte Serendipita indica and an actinobacterium Zhihengliuella sp. ISTPL4. A randomized experiment was conducted, in which rice plants were grown under controlled conditions and As-stressed conditions. The control and treatment groups consisted of untreated and non-stressed plants (C1), treated and non-stressed plants (C2), stressed and untreated plants (T1), and stressed and treated plants (T2). Various phenotypic characteristics such as shoot length (SL), root length (RL), shoot fresh weight (SFW), root fresh weight (RFW), shoot dry weight (SDW), and root dry weight (RDW) and biochemical parameters such as chlorophyll content, protein content, and antioxidant enzymatic activities were evaluated. The activity of various antioxidant enzymes was increased in T2 followed by T1 plants. Furthermore, high concentrations of phytohormones such as ethylene (ET), gibberellic acid (GA), and cytokinin (CK) were found at 4.11 μmol mg-1, 2.53 μmol mg-1, and 3.62 μmol mg-1 of FW of plant, respectively. The results of AAS indicated an increased As accumulation in roots of T2 plants (131.5 mg kg-1) than in roots of T1 plants (120 mg kg-1). It showed that there was an increased As accumulation and sequestration in roots of microbial-treated plants (T2) than in uninoculated plants (T1). Our data suggest that this microbial combination can be used to reduce the toxic effects of As in plants by increasing the activity of antioxidant enzymes such as SOD, CAT, PAL, PPO and POD. Furthermore, rice plants can withstand As stress owing to the active synthesis of phytohormones in the presence of microbial combinations.
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Affiliation(s)
- Neha Sharma
- Amity Institute of Microbial Technology, Amity University, Noida, Uttar Pradesh, India
| | - Gaurav Yadav
- Amity Institute of Microbial Technology, Amity University, Noida, Uttar Pradesh, India
| | - Jaagriti Tyagi
- Amity Institute of Microbial Technology, Amity University, Noida, Uttar Pradesh, India
| | - Ajay Kumar
- Amity Institute of Biotechnology, Amity University, Noida, Uttar Pradesh, India
| | - Monika Koul
- Department of Botany, Hansraj College, University of Delhi, New Delhi, India
| | - Naveen Chandra Joshi
- Amity Institute of Microbial Technology, Amity University, Noida, Uttar Pradesh, India
| | - Abeer Hashem
- Botany and Microbiology Department, College of Science, King Saud University, Riyadh, Saudi Arabia
| | - Elsayed Fathi Abd_Allah
- Plant Production Department, College of Food and Agricultural Sciences, King Saud University, Riyadh, Saudi Arabia
| | - Arti Mishra
- Department of Botany, Hansraj College, University of Delhi, New Delhi, India
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Hassan A, Hamid FS, Pariatamby A, Ossai IC, Ahmed A, Barasarathi J, Auta HS. Influence of bioaugmented fungi on tolerance, growth and phytoremediation ability of Prosopis juliflora Sw. DC in heavy metal-polluted landfill soil. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:28671-28694. [PMID: 38561536 DOI: 10.1007/s11356-024-33018-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Accepted: 03/16/2024] [Indexed: 04/04/2024]
Abstract
The research aimed to determine the influence of endophytic fungi on tolerance, growth and phytoremediation ability of Prosopis juliflora in heavy metal-polluted landfill soil. A consortium of 13 fungal isolates as well as Prosopis juliflora Sw. DC was used to decontaminate heavy metal-polluted landfill soil. Enhanced plant growth (biomass and root and shoot lengths) and production of carotenoids, chlorophyll and amino acids L-phenylalanine and L-leucine that are known to enhance growth were found in the treated P. juliflora. Better accumulations of heavy metals were observed in fungi-treated P. juliflora over the untreated one. An upregulated activity of peroxidase, catalase and ascorbate peroxidase was recorded in fungi-treated P. juliflora. Additionally, other metabolites, such as glutathione, 3,5,7,2',5'-pentahydroxyflavone, 5,2'-dihydroxyflavone and 5,7,2',3'-tetrahydroxyflavone, and small peptides, which include Lys Gln Ile, Ser Arg Ala, Asp Arg Gly, Arg Ser Ser, His His Arg, Arg Thr Glu, Thr Arg Asp and Ser Pro Arg, were also detected. These provide defence supports to P. juliflora against toxic metals. Inoculating the plant with the fungi improved its growth, metal accumulation as well as tolerance against heavy metal toxicity. Such a combination can be used as an effective strategy for the bioremediation of metal-polluted soil.
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Affiliation(s)
- Auwalu Hassan
- Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia.
- Center for Research in Waste Management, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia.
- Department of Biological Sciences, Faculty of Science, Federal University of Kashere, Kashere, Gombe State, Nigeria.
| | - Fauziah Shahul Hamid
- Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia
- Center for Research in Waste Management, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia
| | - Agamuthu Pariatamby
- Jeffrey Sachs Center On Sustainable Development, Sunway University, Sunway, Malaysia
| | - Innocent Chukwunonso Ossai
- Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia
- Center for Research in Waste Management, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia
| | - Aziz Ahmed
- Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia
- Center for Research in Waste Management, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia
- Faculty of Marine Sciences, Lasbela University of Agriculture, Water and Marine Sciences, Uthal, Balochistan, Pakistan
| | - Jayanthi Barasarathi
- Faculty of Health and Life Sciences (FHLS), INTI International University, Pesiaran Perdana BBN, Nilai, Negeri Sambilan, Malaysia
| | - Helen Shnada Auta
- Department of Microbiology, Federal University of Technology, Minna, Niger State, Nigeria
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Qin X, Xu J, An X, Yang J, Wang Y, Dou M, Wang M, Huang J, Fu Y. Insight of endophytic fungi promoting the growth and development of woody plants. Crit Rev Biotechnol 2024; 44:78-99. [PMID: 36592988 DOI: 10.1080/07388551.2022.2129579] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2022] [Revised: 04/04/2022] [Accepted: 04/16/2022] [Indexed: 01/04/2023]
Abstract
Microorganisms play an important role in plant growth and development. In particular, endophytic fungi is one of the important kinds of microorganisms and has a mutually beneficial symbiotic relationship with host plants. Endophytic fungi have many substantial benefits to host plants, especially for woody plants, such as accelerating plant growth, enhancing stress resistance, promoting nutrient absorption, resisting pathogens and etc. However, the effects of endophytic fungi on the growth and development of woody plants have not been systematically summarized. In this review, the functions of endophytic fungi for the growth and development of woody plants have been mainly reviewed, including regulating plant growth (e.g., flowering, root elongation, etc.) by producing nutrients and plant hormones, and improving plant disease, insect resistance and heavy metal resistance by producing secondary metabolites. In addition, the diversity of endophytic fungi could improve the ability of woody plants to adapt to adverse environment. The components produced by endophytic fungi have excellent potential for the growth and development of woody plants. This review has systematically discussed the potential regulation mechanism of endophytic fungi regulating the growth and development of woody plants, it would be of great significance for the development and utilization of endophytic fungi resource from woody plants for the protection of forest resources.
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Affiliation(s)
- Xiangyu Qin
- Key Laboratory of Forest Plant Ecology, Ministry of Education, Northeast Forestry University, Harbin, PR China
- College of Chemistry, Chemical Engineering and Resource Utilization, Northeast Forestry University, Harbin, PR China
| | - Jian Xu
- Key Laboratory of Forest Plant Ecology, Ministry of Education, Northeast Forestry University, Harbin, PR China
- College of Chemistry, Chemical Engineering and Resource Utilization, Northeast Forestry University, Harbin, PR China
| | - Xiaoli An
- Key Laboratory of Forest Plant Ecology, Ministry of Education, Northeast Forestry University, Harbin, PR China
- College of Chemistry, Chemical Engineering and Resource Utilization, Northeast Forestry University, Harbin, PR China
| | - Jie Yang
- Key Laboratory of Forest Plant Ecology, Ministry of Education, Northeast Forestry University, Harbin, PR China
- College of Chemistry, Chemical Engineering and Resource Utilization, Northeast Forestry University, Harbin, PR China
| | - Yao Wang
- Key Laboratory of Forest Plant Ecology, Ministry of Education, Northeast Forestry University, Harbin, PR China
- College of Chemistry, Chemical Engineering and Resource Utilization, Northeast Forestry University, Harbin, PR China
| | - Meijia Dou
- Key Laboratory of Forest Plant Ecology, Ministry of Education, Northeast Forestry University, Harbin, PR China
- College of Chemistry, Chemical Engineering and Resource Utilization, Northeast Forestry University, Harbin, PR China
| | - Minggang Wang
- The College of Forestry, Beijing Forestry University, Beijing, PR China
| | - Jin Huang
- Key Laboratory of Forest Plant Ecology, Ministry of Education, Northeast Forestry University, Harbin, PR China
- College of Chemistry, Chemical Engineering and Resource Utilization, Northeast Forestry University, Harbin, PR China
| | - Yujie Fu
- The College of Forestry, Beijing Forestry University, Beijing, PR China
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Woo JI, Injamum-Ul-Hoque M, Zainurin N, Shaffique S, Kwon EH, Gam HJ, Jeon JR, Lee IJ, Joo GJ, Kang SM. Gibberellin-Producing Bacteria Isolated from Coastal Soil Enhance Seed Germination of Mallow and Broccoli Plants under Saline Conditions. BIOTECH 2023; 12:66. [PMID: 38131678 PMCID: PMC10741878 DOI: 10.3390/biotech12040066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 11/23/2023] [Accepted: 12/08/2023] [Indexed: 12/23/2023] Open
Abstract
Salinity hinders plant growth, posing a substantial challenge to sustainable agricultural yield maintenance. The application of plant growth-promoting rhizobacteria (PGPR) offers an emerging strategy to mitigate the detrimental effects of high salinity levels. This study aimed to isolate and identify gibberellin-producing bacteria and their impact on the seed germination of Malva verticillata (mallow) and Brassica oleracea var. italica (broccoli) under salt stress. In this study, seven bacterial isolates (KW01, KW02, KW03, KW04, KW05, KW06, and KW07) were used to assess their capacity for producing various growth-promoting traits and their tolerance to varying amounts of salinity (100 mM and 150 Mm NaCl). The findings revealed that KW05 and KW07 isolates outperformed other isolates in synthesizing indole-3-acetic acid, siderophores, and exopolysaccharides and in solubilizing phosphates. These isolates also enhanced phosphatase activity and antioxidant levels, including superoxide dismutase and catalase. Both KW05 and KW07 isolate highlight the growth-promoting effects of gibberellin by enhancing of growth parameters of Waito-C rice. Further, gas chromatography-mass spectrometry validation confirmed the ability of KW05 and KW07 to produce gibberellins (GAs), including GA1, GA3, GA4, and GA7. Seed germination metrics were enhanced due to the inoculation of KW05 and KW07. Moreover, inoculation with KW05 increased the fresh weight (FW) (7.82%) and total length (38.61%) of mallow under salt stress. Inoculation with KW07 increased the FW (32.04%) and shoot length of mallow under salt stress. A single inoculation of these two isolates increased broccoli plants' FW and shoot length under salt stress. Gibberellin-producing bacteria helps in plant growth promotion by improving salt tolerance by stimulating root elongation and facilitating enhanced absorption of water and nutrient uptake in salty environments. Based on these findings, they can play a role in boosting agricultural yield in salt-affected areas, which would help to ensure the long-term viability of agriculture in coastal regions.
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Affiliation(s)
- Ji-In Woo
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea; (J.-I.W.); (M.I.-U.-H.); (N.Z.); (S.S.); (E.-H.K.); (H.-J.G.); (J.R.J.); (I.-J.L.)
| | - Md. Injamum-Ul-Hoque
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea; (J.-I.W.); (M.I.-U.-H.); (N.Z.); (S.S.); (E.-H.K.); (H.-J.G.); (J.R.J.); (I.-J.L.)
| | - Nazree Zainurin
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea; (J.-I.W.); (M.I.-U.-H.); (N.Z.); (S.S.); (E.-H.K.); (H.-J.G.); (J.R.J.); (I.-J.L.)
| | - Shifa Shaffique
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea; (J.-I.W.); (M.I.-U.-H.); (N.Z.); (S.S.); (E.-H.K.); (H.-J.G.); (J.R.J.); (I.-J.L.)
| | - Eun-Hae Kwon
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea; (J.-I.W.); (M.I.-U.-H.); (N.Z.); (S.S.); (E.-H.K.); (H.-J.G.); (J.R.J.); (I.-J.L.)
| | - Ho-Jun Gam
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea; (J.-I.W.); (M.I.-U.-H.); (N.Z.); (S.S.); (E.-H.K.); (H.-J.G.); (J.R.J.); (I.-J.L.)
| | - Jin Ryeol Jeon
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea; (J.-I.W.); (M.I.-U.-H.); (N.Z.); (S.S.); (E.-H.K.); (H.-J.G.); (J.R.J.); (I.-J.L.)
| | - In-Jung Lee
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea; (J.-I.W.); (M.I.-U.-H.); (N.Z.); (S.S.); (E.-H.K.); (H.-J.G.); (J.R.J.); (I.-J.L.)
| | - Gil-Jae Joo
- Institute of Agricultural Science and Technology, Kyungpook National University, Daegu 41566, Republic of Korea;
| | - Sang-Mo Kang
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea; (J.-I.W.); (M.I.-U.-H.); (N.Z.); (S.S.); (E.-H.K.); (H.-J.G.); (J.R.J.); (I.-J.L.)
- Institute of Agricultural Science and Technology, Kyungpook National University, Daegu 41566, Republic of Korea;
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Mishra S, Sharma S. Temporal dynamics of endophytic bacterial and fungal communities during spike development in Piper longum L. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2023; 29:1117-1134. [PMID: 37829705 PMCID: PMC10564784 DOI: 10.1007/s12298-023-01352-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 08/24/2023] [Accepted: 08/28/2023] [Indexed: 10/14/2023]
Abstract
The female spikes (fruits) of Piper longum are widely used in Ayurvedic, Siddha and Unani medicine systems to treat respiratory and digestive disorders. The spikes are rich in piperine, a pharmacologically active amide alkaloid and a potent bioavailability enhancer, which accumulates to the highest level during the dark-green stage of spike development. Plant-associated microbiota influence the plant's fitness, response, and production of economically important metabolites. Considering the economic importance of piperine and other spike-derived alkaloids, understanding microbial community dynamics during spike development would be key to bioprospecting for economically important metabolites. In the present study, the structural diversity of microbial communities associated with early (SI), mid (SII), and late (SIII) stages of spike development in P. longum has been analysed by Illumina-based amplicon sequencing of 16S rRNA gene and ITS region. Results revealed that spike development significantly drives the diversity and abundance of spike-associated microbiota, especially bacterial communities. Cyanobacteria and Ascomycota constituted the most abundant bacterial and fungal phyla, respectively, across all stages of spike development. Interestingly, Halomonas, Kushneria and Haererehalobacter were found to be exclusively associated with SIII (corresponding to economically important) stage of spike development. Sphingomonas, Mortierella, Cladosporium and Vishniacozyma constituted the core microbiome of the spike. Besides, PICRUSt analysis revealed that amino acid metabolism was the most dominant metabolic function attributed to spike-associated bacterial communities. To the best of our knowledge, this is the first study to investigate the endomicrobiome dynamics during spike development in a medicinal plant species. Supplementary Information The online version contains supplementary material available at 10.1007/s12298-023-01352-2.
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Affiliation(s)
- Sushma Mishra
- Department of Botany, University of Lucknow, Lucknow, Uttar Pradesh 226007 India
| | - Shilpi Sharma
- Department of Biochemical Engineering and Biotechnology, Indian Institute of Technology Delhi, New Delhi, Delhi 110016 India
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Bahadori Ganjabadi P, Farzaneh M, Mirjalili MH. Development and Optimization of Culture Medium for the Production of Glabridin by Aspergillus eucalypticola: An Endophytic Fungus Isolated from Glycyrrhiza glabra L. (Fabaceae). MYCOBIOLOGY 2023; 51:230-238. [PMID: 37711984 PMCID: PMC10498790 DOI: 10.1080/12298093.2023.2225253] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/06/2023] [Revised: 05/11/2023] [Accepted: 06/09/2023] [Indexed: 09/16/2023]
Abstract
Glabridin is a well-known active isoflavone found in the root of licorice (Glycyrrhiza glabra L.) that possess a wide range of biological activity. Plant cells, hairy roots, and fungal endophytes cultures are the most important alternative methods for plant resources conservation and sustainable production of natural compounds, which has received much attention in recent decades. In the present study, an efficient culture condition was optimized for the biomass accumulation and glabridin production from fungal endophyte Aspergillus eucalypticola SBU-11AE isolated from licorice root. Type of culture medium, range of pH, and licorice root extract (as an elicitor) were tested. The results showed that the highest and lowest biomass production was observed on PCB medium (6.43 ± 0.32 g/l) and peptone malt (5.85 + 0.11 g/l), respectively. The medium culture PCB was produced the highest level of glabridin (7.26 ± 0.44 mg/l), while the lowest level (4.47 ± 0.02 mg/l) was obtained from the medium peptone malt. The highest biomass (8.51 ± 0.43 g/l) and glabridin (8.30 ± 0.51 mg/l) production were observed from the PCB medium adjusted with pH = 6, while the lowest value of both traits was obtained from the same medium with pH = 7. The highest production of total glabridin (10.85 ± 0.84 mg/l) was also obtained from the culture medium treated with 100 mg/l of the plant root extract. This information can be interestingly used for the commercialization of glabridin production for further industrial applications.
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Affiliation(s)
- Parisa Bahadori Ganjabadi
- Department of Agriculture, Medicinal Plants and Drugs Research Institute, Shahid Beheshti University, Tehran, Iran
| | - Mohsen Farzaneh
- Department of Agriculture, Medicinal Plants and Drugs Research Institute, Shahid Beheshti University, Tehran, Iran
| | - Mohammad Hossein Mirjalili
- Department of Agriculture, Medicinal Plants and Drugs Research Institute, Shahid Beheshti University, Tehran, Iran
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Chaudhary R, Kumar V, Gupta S, Naik B, Prasad R, Mishra S, Saris PEJ, Kumar V. Finger Millet ( Eleusine coracana) Plant-Endophyte Dynamics: Plant Growth, Nutrient Uptake, and Zinc Biofortification. Microorganisms 2023; 11:microorganisms11040973. [PMID: 37110396 PMCID: PMC10143119 DOI: 10.3390/microorganisms11040973] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2023] [Revised: 03/30/2023] [Accepted: 04/05/2023] [Indexed: 04/29/2023] Open
Abstract
Endophytic fungi and bacteria were isolated from finger millet and their effects on finger millet growth parameters and zinc and NPK contents in grains were studied. Out of 70 fungal and 112 bacterial endophytes, the two best fungal and bacterial isolates were selected on the basis of zinc solubilization and plant-growth-promoting attributes. The fungal isolates identified were Aspergillus terreus and Lecanicillium sp., and the bacterial isolates were Pseudomonas bijieensis and Priestia megaterium. The endophytic zinc, NPK mobilization, and plant-growth-promoting efficacy were determined in a pot experiment with zinc carbonate as the zinc source. Endophytic-primed plants showed enhanced shoot and root lengths compared to the unprimed control. Endophytes increased the zinc content in grains by between 12.12% and 18.80% compared to control plants. Endophytes also augmented the NPK concentrations in seeds compared to control plants and exhibited stability in a diverse range of pHs, temperatures, and NaCl concentrations, and exhibited growth on various carbohydrate and nitrogen sources. This is the first study reporting the interaction of Aspergillus terreus, Lecanicillium sp., Pseudomonas bijieensis, and Priestia megaterium with finger millet for grain Zn biofortification and NPK concentration enhancement. This study indicated that zinc-dissolving endophytes possess the potential for enhancing the zinc and NPK content in grains in addition to the plant-growth-promoting attributes.
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Affiliation(s)
- Renu Chaudhary
- Himalayan School of Biosciences, Swami Rama Himalayan University, Jolly Grant, Dehradun 248016, India
| | - Vijay Kumar
- Himalayan School of Biosciences, Swami Rama Himalayan University, Jolly Grant, Dehradun 248016, India
| | - Sanjay Gupta
- Himalayan School of Biosciences, Swami Rama Himalayan University, Jolly Grant, Dehradun 248016, India
| | - Bindu Naik
- Department of Life Sciences, Graphic Era (Deemed to be) University, Bell Road, Clement Town, Dehradun 248002, India
| | - Ram Prasad
- Department of Botany, School of Life Sciences, Mahatma Gandhi Central University, Motihari 845401, India
| | - Sadhna Mishra
- Faculty of Agricultural Sciences, GLA University, Mathura 281406, India
| | - Per Erik Joakim Saris
- Department of Microbiology, Faculty of Agriculture and Forestry, University of Helsinki, 00100 Helsinki, Finland
| | - Vivek Kumar
- Himalayan School of Biosciences, Swami Rama Himalayan University, Jolly Grant, Dehradun 248016, India
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Bilal S, Khan T, Asaf S, Khan NA, Saad Jan S, Imran M, Al-Rawahi A, Khan AL, Lee IJ, Al-Harrasi A. Silicon-Induced Morphological, Biochemical and Molecular Regulation in Phoenix dactylifera L. under Low-Temperature Stress. Int J Mol Sci 2023; 24:ijms24076036. [PMID: 37047009 PMCID: PMC10094002 DOI: 10.3390/ijms24076036] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Revised: 03/15/2023] [Accepted: 03/16/2023] [Indexed: 04/14/2023] Open
Abstract
Climate changes abruptly affect optimum growth temperatures, leading to a negative influence on plant physiology and productivity. The present study aimed to investigate the extent of low-temperature stress effects on date palm growth and physiological indicators under the exogenous application of silicon (Si). Date palm seedlings were treated with Si (1.0 mM) and exposed to different temperature regimes (5, 15, and 30 °C). It was observed that the application of Si markedly improved fresh and dry biomass, photosynthetic pigments (chlorophyll and carotenoids), plant morphology, and relative water content by ameliorating low-temperature-induced oxidative stress. Low-temperature stress (5 and 15 °C), led to a substantial upregulation of ABA-signaling-related genes (NCED-1 and PyL-4) in non Si treated plants, while Si treated plants revealed an antagonistic trend. However, jasmonic acid and salicylic acid accumulation were markedly elevated in Si treated plants under stress conditions (5 and 15 °C) in comparison with non Si treated plants. Interestingly, the upregulation of low temperature stress related plant plasma membrane ATPase (PPMA3 and PPMA4) and short-chain dehydrogenases/reductases (SDR), responsible for cellular physiology, stomatal conductance and nutrient translocation under silicon applications, was observed in Si plants under stress conditions in comparison with non Si treated plants. Furthermore, a significant expression of LSi-2 was detected in Si plants under stress, leading to the significant accumulation of Si in roots and shoots. In contrast, non Si plants demonstrated a low expression of LSi-2 under stress conditions, and thereby, reduced level of Si accumulation were observed. Less accumulation of oxidative stress was evident from the expression of superoxide dismutase (SOD) and catalase (CAT). Additionally, Si plants revealed a significant exudation of organic acids (succinic acid and citric acid) and nutrient accumulation (K and Mg) in roots and shoots. Furthermore, the application of Si led to substantial upregulation of the low temperature stress related soybean cold regulated gene (SRC-2) and ICE-1 (inducer of CBF expression 1), involved in the expression of CBF/DREB (C-repeat binding factor/dehydration responsive element binding factor) gene family under stress conditions in comparison with non Si plants. The current research findings are crucial for exploring the impact on morpho-physio-biochemical attributes of date palms under low temperature and Si supplementation, which may provide an efficient strategy for growing plants in low-temperature fields.
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Affiliation(s)
- Saqib Bilal
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
| | - Taimoor Khan
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
- School of Life Sciences, University of Warwick, Coventry CV4 7AL, UK
| | - Sajjad Asaf
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
| | - Nasir Ali Khan
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
- Department of Plant and Soil Science, Institute of Genomics for Crop Abiotic Stress Tolerance, Texas Tech University, Lubbock, TX 79409, USA
| | - Syed Saad Jan
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
| | - Muhammad Imran
- Division of Plant Biosciences, School of Applied Biosciences, College of Agriculture & Life Science, Kyungpook National University, 80 Dahak-ro, Buk-gu, Daegu 41566, Republic of Korea
| | - Ahmed Al-Rawahi
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
| | - Abdul Latif Khan
- Department of Engineering Technology, University of Houston, Sugar Land, TX 77479, USA
| | - In-Jung Lee
- Division of Plant Biosciences, School of Applied Biosciences, College of Agriculture & Life Science, Kyungpook National University, 80 Dahak-ro, Buk-gu, Daegu 41566, Republic of Korea
| | - Ahmed Al-Harrasi
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
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Shi G, Hu J, Cheng Y, Shi W, Chen Y. Pseudomonas aeruginosa improved the phytoremediation efficiency of ryegrass on nonylphenol-cadmium co-contaminated soil. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:28247-28258. [PMID: 36401010 DOI: 10.1007/s11356-022-24224-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Accepted: 11/10/2022] [Indexed: 06/16/2023]
Abstract
The effect of Pseudomonas aeruginosa (P. aeruginosa) on the phytoremediation efficiency of ryegrass on soil contaminated with nonylphenol (NP) and cadmium (Cd) was investigated by pot experiments. Pseudomonas aeruginosa application stimulated the adsorption of Cd by ryegrass and facilitated the biodegradation of NP in the soil. Exogenous P. aeruginosa inoculation increased the activities of urease, dehydrogenase, and polyphenol oxidase in the soil of the T4 treatment by 38.5%, 50.0%, and 56.5% compared to that of the T2 treatment, respectively. There was a significant positive correlation between the activities of dehydrogenase and polyphenol oxidase and the NP removal rate (P < 0.001). The relative abundances of beneficial microorganisms (such as Sphingomonas, Lysobacter, Streptomyces, Chloroflexia, Deltaproteobacteria, and Alphaproteobacteria) were increased as a result of P. aeruginosa inoculation. These microorganisms play important roles in nutrient cycling, Cd adsorption, and NP degradation. Additionally, P. aeruginosa was not the dominate bacterial species at the end of the experiment. According to this study, P. aeruginosa application improved the phytoremediation efficiency of ryegrass on soil contaminated with NP and Cd, with a minimal risk of alien microbial invasion.
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Affiliation(s)
- Guangyu Shi
- School of Environmental Science and Engineering, Suzhou University of Science and Technology, Suzhou, 215000, China.
- Fujian Provincial Key Lab of Coastal Basin Environment, Fujian Polytechnic Normal University, Fujian, 350000, China.
| | - Jiayuan Hu
- School of Environmental Science and Engineering, Suzhou University of Science and Technology, Suzhou, 215000, China
| | - Yuanyuan Cheng
- School of Environmental Science and Engineering, Suzhou University of Science and Technology, Suzhou, 215000, China
| | - Weilin Shi
- School of Environmental Science and Engineering, Suzhou University of Science and Technology, Suzhou, 215000, China
| | - Yan Chen
- Institute of Quality Standard and Monitoring Technology for Agro-Products of Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China.
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11
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Chen S, Tian Z, Guo Y. Characterization of hexokinase gene family members in Glycine max and functional analysis of GmHXK2 under salt stress. Front Genet 2023; 14:1135290. [PMID: 36911414 PMCID: PMC9996050 DOI: 10.3389/fgene.2023.1135290] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Accepted: 02/13/2023] [Indexed: 02/25/2023] Open
Abstract
Hexokinase (HXK) is a bifunctional enzyme involved in carbohydrate metabolism and sugar signal sensing. HXK gene family has been extensively discussed in many species, while the detailed investigations of the family in Glycine max have yet to be reported. In this study, 17 GmHXK genes (GmHXKs) were identified in the G. max genome and the features of their encoded proteins, conserved domains, gene structures, and cis-acting elements were systematically characterized. The GmHXK2 gene isolated from G. max was firstly constructed into plant expression vector pMDC83 and then transformed with Agrobacterium tumefaciens into Arabidopsis thaliana. The expression of integrated protein was analyzed by Western Blotting. Subcellular localization analysis showed that the GmHXK2 was located on both vacuolar and cell membrane. Under salt stress, seedlings growth was significantly improved in Arabidopsis overexpressing GmHXK2 gene. Furthermore, physiological indicators and expression of salt stress responsive genes involved in K+ and Na+ homeostasis were significantly lower in GmHXK2-silenced soybean seedlings obtained by virus-induced gene silencing (VIGS) technique under salt stress compared with the control plants. Our study showed that GmHXK2 gene played an important role in resisting salt stress, which suggested potential value for the genetic improvement of abiotic resistant crops.
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Affiliation(s)
- Shuai Chen
- School of Life Sciences, Zhengzhou University, Zhengzhou, China
| | - Zengyuan Tian
- School of Agricultural Sciences, Zhengzhou University, Zhengzhou, China
| | - Yuqi Guo
- School of Life Sciences, Zhengzhou University, Zhengzhou, China
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12
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Bilal S, Shahzad R, Asaf S, Imran M, Al-Harrasi A, Lee IJ. Efficacy of endophytic SB10 and glycine betaine duo in alleviating phytotoxic impact of combined heat and salinity in Glycine max L. via regulation of redox homeostasis and physiological and molecular responses. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 316:120658. [PMID: 36379292 DOI: 10.1016/j.envpol.2022.120658] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 11/10/2022] [Accepted: 11/11/2022] [Indexed: 06/16/2023]
Abstract
Adverse environmental stresses occurring simultaneously exhibit a lethal effect on crop productivity at the global level. Here, we investigated the individual and synergistic effects of endophytic T. virens SB10 and glycine betaine (GB) on the physiological and biochemical responses of Glycine max L. to alleviate the devastating effects of combined heat and salinity (HS) stress. Screening against HS stress tolerance showed that SB10 has significant tolerance against heat stress and produces hormones such as gibberellins and indole-3-acetic acid upon GB amendment of the growth medium under HS stress. Moreover, the current findings illustrated that the synergistic application of SB10 and GB was effective in alleviating the negative effects of HS stress on plant growth and physiology. The findings revealed that SB10 + GB led to a reduction in proline accumulation and Na+ uptake. It also maintained a high K+/Na + ratio by regulating GmHKT1 and GmSOS1 expression and enhanced macronutrient uptake (N, Ca, K) in plants. In turn, plants exhibited a higher growth rate and gaseous exchange attributes coupled with the upregulation of APX, SOD, POD, and GSH antioxidant activities and transcript accumulation of GmSOD1 and GmAPX1 to overcome HS-induced oxidative damage. Furthermore, SB10 + GB downregulated DREB2, DREB1B, and GmNCED3 expression and resulted in the reduced accumulation of endogenous ABA while enhancing endogenous SA accumulation via upregulation of PAL genes. In addition, enhanced accumulation of bioactive gibberellins (GA1, GA3, GA4, and GA7) was detected under HS stress in the SB10 + GB treatment group. Moreover, SB10 + GB also significantly regulated GmHsp90A2 and GmHsfA2 expression in tolerance against HS stress. The combination of SB10 and GB was shown to be an effective and alternative approach for growing G. max at high temperature coupled with saline conditions for sustainable agriculture.
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Affiliation(s)
- Saqib Bilal
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman.
| | - Raheem Shahzad
- Department of Horticulture, The University of Haripur, Haripur, 22620, Khyber Pakhtunkhwa, Pakistan.
| | - Sajjad Asaf
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman.
| | - Muhammad Imran
- School of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea
| | - Ahmed Al-Harrasi
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman.
| | - In-Jung Lee
- School of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea
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Hajiboland R, Panda CK, Lastochkina O, Gavassi MA, Habermann G, Pereira JF. Aluminum Toxicity in Plants: Present and Future. JOURNAL OF PLANT GROWTH REGULATION 2022. [DOI: 10.1007/s00344-022-10866-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2022] [Accepted: 10/26/2022] [Indexed: 06/23/2023]
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14
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Pandey AK, Zorić L, Sun T, Karanović D, Fang P, Borišev M, Wu X, Luković J, Xu P. The Anatomical Basis of Heavy Metal Responses in Legumes and Their Impact on Plant-Rhizosphere Interactions. PLANTS (BASEL, SWITZERLAND) 2022; 11:2554. [PMID: 36235420 PMCID: PMC9572132 DOI: 10.3390/plants11192554] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Revised: 09/15/2022] [Accepted: 09/22/2022] [Indexed: 06/16/2023]
Abstract
Rapid industrialization, urbanization, and mine tailings runoff are the main sources of heavy metal contamination of agricultural land, which has become one of the major constraints to crop growth and productivity. Finding appropriate solutions to protect plants and agricultural land from heavy metal pollution/harmful effects is important for sustainable development. Phytoremediation and plant growth-promoting rhizobacteria (PGPR) are promising methods for this purpose, which both heavily rely on an appropriate understanding of the anatomical structure of plants. Specialized anatomical features, such as those of epidermis and endodermis and changes in the root vascular tissue, are often associated with heavy metal tolerance in legumes. This review emphasizes the uptake and transport of heavy metals by legume plants that can be used to enhance soil detoxification by phytoremediation processes. Moreover, the review also focuses on the role of rhizospheric organisms in the facilitation of heavy metal uptake, the various mechanisms of enhancing the availability of heavy metals in the rhizosphere, the genetic diversity, and the microbial genera involved in these processes. The information presented here can be exploited for improving the growth and productivity of legume plants in metal-prone soils.
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Affiliation(s)
- Arun K. Pandey
- College of Life Sciences, China Jiliang University, Hangzhou 310018, China
| | - Lana Zorić
- Department of Biology and Ecology, Faculty of Sciences, University of Novi Sad, 21121 Novi Sad, Serbia
| | - Ting Sun
- College of Life Sciences, China Jiliang University, Hangzhou 310018, China
- Key Laboratory of Specialty Agri-Product Quality and Hazard Controlling Technology of Zhejiang Province, Hangzhou 310018, China
| | - Dunja Karanović
- Department of Biology and Ecology, Faculty of Sciences, University of Novi Sad, 21121 Novi Sad, Serbia
| | - Pingping Fang
- College of Life Sciences, China Jiliang University, Hangzhou 310018, China
- Key Laboratory of Specialty Agri-Product Quality and Hazard Controlling Technology of Zhejiang Province, Hangzhou 310018, China
| | - Milan Borišev
- Department of Biology and Ecology, Faculty of Sciences, University of Novi Sad, 21121 Novi Sad, Serbia
| | - Xinyang Wu
- College of Life Sciences, China Jiliang University, Hangzhou 310018, China
- Key Laboratory of Specialty Agri-Product Quality and Hazard Controlling Technology of Zhejiang Province, Hangzhou 310018, China
| | - Jadranka Luković
- Department of Biology and Ecology, Faculty of Sciences, University of Novi Sad, 21121 Novi Sad, Serbia
| | - Pei Xu
- College of Life Sciences, China Jiliang University, Hangzhou 310018, China
- Key Laboratory of Specialty Agri-Product Quality and Hazard Controlling Technology of Zhejiang Province, Hangzhou 310018, China
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15
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Sharma VK, Parmar S, Tang W, Hu H, White JF, Li H. Effects of fungal seed endophyte FXZ2 on Dysphania ambrosioides Zn/Cd tolerance and accumulation. Front Microbiol 2022; 13:995830. [PMID: 36212824 PMCID: PMC9532605 DOI: 10.3389/fmicb.2022.995830] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2022] [Accepted: 08/29/2022] [Indexed: 11/16/2022] Open
Abstract
Metal-induced oxidative stress in contaminated soils affects plant growth. In the present study, we evaluated the role of seed endophyte FXZ2 on Dysphania ambrosioides Zn/Cd tolerance and accumulation. A series of pot experiments were conducted under variable Zn (500, 1,000, and 1,500 mg kg–1) and Cd (5, 15, 30, and 60 mg kg–1). The results demonstrated that FXZ2-inoculation significantly enhanced the growth of D. ambrosioides and improved its chlorophyll and GSH content. In the rhizosphere, FXZ2 inoculation changed the chemical speciation of Zn/Cd and thus affected their uptake and accumulation in host plants. The exchangeable and carbonate-bound fractions (F1 + F2) of Zn decreased in the rhizosphere of FXZ2-inoculated plants (E+) as compared to non-inoculated plants (E-) under Zn stress (500 and 1,000 mg kg–1), correspondingly, Zn in the shoots of E+ decreased (p < 0.05). However, at Cd stress (30 and 60 mg kg–1), the F1 + F2 fractions of Cd in E+ rhizospheric soils increased; subsequently, Cd in the shoots of E+ increased (p < 0.05). FXZ2 could exogenously secrete phytohormones IAA, GA, and JA. The study suggests that seed endophyte FXZ2 can increase Zn/Cd tolerance of host plant by altering Zn/Cd speciation in rhizospheric soils, as well as exogenous production of phytohormones to promote growth, lowering oxidative damage while enhancing antioxidant properties. For Zn/Cd accumulation, it has opposite effects: Zn uptake in E+ plants was significantly (p < 0.05) decreased, while Cd accumulation in E+ plants was significantly (p < 0.05) increased. Thus, FXZ2 has excellent application prospects in Cd phytoextraction and decreasing Zn toxicity in agriculturally important crops.
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Affiliation(s)
- Vijay K. Sharma
- Medical School, Kunming University of Science and Technology, Kunming, China
| | - Shobhika Parmar
- Medical School, Kunming University of Science and Technology, Kunming, China
| | - Wenting Tang
- Medical School, Kunming University of Science and Technology, Kunming, China
| | - Haiyan Hu
- State Key Laboratory of Environmental Geochemistry, Institute of Geochemistry, Chinese Academy of Sciences, Guiyang, China
| | - James F. White
- Department of Plant Biology, Rutgers University, New Brunswick, NJ, United States
| | - Haiyan Li
- Medical School, Kunming University of Science and Technology, Kunming, China
- *Correspondence: Haiyan Li,
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Phour M, Sindhu SS. Mitigating abiotic stress: microbiome engineering for improving agricultural production and environmental sustainability. PLANTA 2022; 256:85. [PMID: 36125564 DOI: 10.1007/s00425-022-03997-x] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2022] [Accepted: 09/11/2022] [Indexed: 06/15/2023]
Abstract
The responses of plants to different abiotic stresses and mechanisms involved in their mitigation are discussed. Production of osmoprotectants, antioxidants, enzymes and other metabolites by beneficial microorganisms and their bioengineering ameliorates environmental stresses to improve food production. Progressive intensification of global agriculture, injudicious use of agrochemicals and change in climate conditions have deteriorated soil health, diminished the microbial biodiversity and resulted in environment pollution along with increase in biotic and abiotic stresses. Extreme weather conditions and erratic rains have further imposed additional stress for the growth and development of plants. Dominant abiotic stresses comprise drought, temperature, increased salinity, acidity, metal toxicity and nutrient starvation in soil, which severely limit crop production. For promoting sustainable crop production in environmentally challenging environments, use of beneficial microbes has emerged as a safer and sustainable means for mitigation of abiotic stresses resulting in improved crop productivity. These stress-tolerant microorganisms play an effective role against abiotic stresses by enhancing the antioxidant potential, improving nutrient acquisition, regulating the production of plant hormones, ACC deaminase, siderophore and exopolysaccharides and accumulating osmoprotectants and, thus, stimulating plant biomass and crop yield. In addition, bioengineering of beneficial microorganisms provides an innovative approach to enhance stress tolerance in plants. The use of genetically engineered stress-tolerant microbes as inoculants of crop plants may facilitate their use for enhanced nutrient cycling along with amelioration of abiotic stresses to improve food production for the ever-increasing population. In this chapter, an overview is provided about the current understanding of plant-bacterial interactions that help in alleviating abiotic stress in different crop systems in the face of climate change. This review largely focuses on the importance and need of sustainable and environmentally friendly approaches using beneficial microbes for ameliorating the environmental stresses in our agricultural systems.
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Affiliation(s)
- Manisha Phour
- Department of Microbiology, CCS Haryana Agricultural University, Hisar, 125004, India
- University Institute of Biotechnology, Chandigarh University, Mohali, India
| | - Satyavir S Sindhu
- Department of Microbiology, CCS Haryana Agricultural University, Hisar, 125004, India.
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17
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Khan T, Bilal S, Asaf S, Alamri SS, Imran M, Khan AL, Al-Rawahi A, Lee IJ, Al-Harrasi A. Silicon-Induced Tolerance against Arsenic Toxicity by Activating Physiological, Anatomical and Biochemical Regulation in Phoenix dactylifera (Date Palm). PLANTS 2022; 11:plants11172263. [PMID: 36079645 PMCID: PMC9459973 DOI: 10.3390/plants11172263] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/26/2022] [Revised: 08/05/2022] [Accepted: 08/07/2022] [Indexed: 11/16/2022]
Abstract
Arsenic is a toxic metal abundantly present in agricultural, industrial, and pesticide effluents. To overcome arsenic toxicity and ensure safety for plant growth, silicon (Si) can play a significant role in its mitigation. Here, we aim to investigate the influence of silicon on date palm under arsenic toxicity by screening antioxidants accumulation, hormonal modulation, and the expression profile of abiotic stress-related genes. The results showed that arsenic exposure (As: 1.0 mM) significantly retarded growth attributes (shoot length, root length, fresh weight), reduced photosynthetic pigments, and raised reactive species levels. Contrarily, exogenous application of Si (Na2SiO3) to date palm roots strongly influenced stress mitigation by limiting the translocation of arsenic into roots and shoots as compared with the arsenic sole application. Furthermore, an enhanced accumulation of polyphenols (48%) and increased antioxidant activities (POD: 50%, PPO: 75%, GSH: 26.1%, CAT: 51%) resulted in a significant decrease in superoxide anion (O2•−: 58%) and lipid peroxidation (MDA: 1.7-fold), in silicon-treated plants, compared with control and arsenic-treated plants. The Si application also reduced the endogenous abscisic acid (ABA: 38%) under normal conditions, and salicylic acid (SA: 52%) and jasmonic acid levels (JA: 62%) under stress conditions as compared with control and arsenic. Interestingly, the genes; zeaxanthin epoxidase (ZEP) and 9-cis-epoxycarotenoid dioxygenase (NCED-1) involved in ABA biosynthesis were upregulated by silicon under arsenic stress. Likewise, Si application also upregulated gene expression of plant plasma membrane ATPase (PMMA-4), aluminum-activated malate transporter (ALMT) responsible for maintaining cellular physiology, stomatal conductance, and short-chain dehydrogenases/reductases (SDR) involved in nutrients translocation. Hence, the study demonstrates the remarkable role of silicon in supporting growth and inducing arsenic tolerance by increasing antioxidant activities and endogenous hormones in date palm. The outcomes of our study can be employed in further studies to better understand arsenic tolerance and decode mechanism.
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Affiliation(s)
- Taimoor Khan
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
| | - Saqib Bilal
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
- Correspondence: (S.B.); (A.L.K.); (A.A.-H.)
| | - Sajjad Asaf
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
| | - Safiya Salim Alamri
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
| | - Muhammad Imran
- Division of Plant Biosciences, School of Applied Biosciences, College of Agriculture & Life Science, Kyungpook National University, 80 Dahak-ro, Buk-gu, Daegu 41566, Korea
| | - Abdul Latif Khan
- Department of Engineering Technology, University of Houston, Sugar Land, TX 77479, USA
- Correspondence: (S.B.); (A.L.K.); (A.A.-H.)
| | - Ahmed Al-Rawahi
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
| | - In-Jung Lee
- Division of Plant Biosciences, School of Applied Biosciences, College of Agriculture & Life Science, Kyungpook National University, 80 Dahak-ro, Buk-gu, Daegu 41566, Korea
| | - Ahmed Al-Harrasi
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
- Correspondence: (S.B.); (A.L.K.); (A.A.-H.)
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Xue J, Tong T, Wang R, Qiu Y, Gu Y, Sun L, Xu H, Lei P. Secretion of poly-γ-glutamic acid by Bacillus atrophaeus NX-12 enhanced its root colonization and biocontrol activity. Front Microbiol 2022; 13:972393. [PMID: 35966665 PMCID: PMC9372288 DOI: 10.3389/fmicb.2022.972393] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2022] [Accepted: 07/04/2022] [Indexed: 11/22/2022] Open
Abstract
Bacilli are used as biocontrol agents (BCAs) against phytopathogens and most of them can produce poly-γ-glutamic acid (γ-PGA) as one of the major extracellular polymeric substances (EPSs). However, the role of γ-PGA in plant biocontrol is still unclear. In this study, Bacillus atrophaeus NX-12 (γ-PGA yield: 16.8 g/l) was screened, which formed a strong biofilm and has been proved to be a promising BCA against Cucumber Fusarium wilt. Then, the γ-PGA synthesis gene cluster pgsBCA was knocked out by CRISPR-Cas9n. Interestingly, the antifungal ability of γ-PGA synthetase-deficient strain NX-12Δpgs (γ-PGA yield: 1.65 g/l) was improved in vitro, while the biocontrol ability of NX-12Δpgs was greatly diminished in situ. Data proved that γ-PGA produced by NX-12 contributes to the biofilm formation and rhizosphere colonization, which effectively improved biocontrol capability. Taken together, these findings prove that the mechanism of γ-PGA promotes the colonization of NX-12 and thus assists in controlling plant diseases, which highlight the key role of γ-PGA produced by BCA in biocontrol.
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Silicon- and Boron-Induced Physio-Biochemical Alteration and Organic Acid Regulation Mitigates Aluminum Phytotoxicity in Date Palm Seedlings. Antioxidants (Basel) 2022; 11:antiox11061063. [PMID: 35739959 PMCID: PMC9219922 DOI: 10.3390/antiox11061063] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2022] [Revised: 05/22/2022] [Accepted: 05/24/2022] [Indexed: 01/04/2023] Open
Abstract
The current study aimed to understand the synergistic impacts of silicon (Si; 1.0 mM) and boron (B; 10 µM) application on modulating physio-molecular responses of date palm to mitigate aluminum (Al3+; 2.0 mM) toxicity. Results revealed that compared to sole Si and B treatments, a combined application significantly improved plant growth, biomass, and photosynthetic pigments during Al toxicity. Interestingly, Si and B resulted in significantly higher exudation of organic acid (malic acids, citric acids, and acetic acid) in the plant’s rhizosphere. This is also correlated with the reduced accumulation and translocation of Al in roots (60%) and shoots (56%) in Si and B treatments during Al toxicity compared to in sole Al3+ treatment. The activation of organic acids by combined Si + B application has significantly regulated the ALMT1, ALMT2 and plasma membrane ATPase; PMMA1 and PMMA3 in roots and shoots. Further, the Si-related transporter Lsi2 gene was upregulated by Si + B application under Al toxicity. This was also validated by the higher uptake and translocation of Si in plants. Al-induced oxidative stress was significantly counteracted by exhibiting lower malondialdehyde and superoxide production in Si + B treatments. Experiencing less oxidative stress was evident from upregulation of CAT and Cyt-Cu/Zn SOD expression; hence, enzymatic activities such as polyphenol oxidase, catalase, peroxidase, and ascorbate peroxidase were significantly activated. In the case of endogenous phytohormones, Si + B application demonstrated the downregulation of the abscisic acid (ABA; NCED1 and NCED6) and salicylic acid (SA; PYL4, PYR1) biosynthesis-related genes. Consequently, we also noticed a lower accumulation of ABA and rising SA levels under Al-stress. The current findings illustrate that the synergistic Si + B application could be an effective strategy for date palm growth and productivity against Al stress and could be further extended in field trails in Al-contaminated fields.
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Narayanan M, El-Sheekh M, Ma Y, Pugazhendhi A, Natarajan D, Kandasamy G, Raja R, Saravana Kumar RM, Kumarasamy S, Sathiyan G, Geetha R, Paulraj B, Liu G, Kandasamy S. Current status of microbes involved in the degradation of pharmaceutical and personal care products (PPCPs) pollutants in the aquatic ecosystem. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 300:118922. [PMID: 35114308 DOI: 10.1016/j.envpol.2022.118922] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Revised: 01/20/2022] [Accepted: 01/26/2022] [Indexed: 06/14/2023]
Abstract
Contamination of aquatic systems with pharmaceuticals, personal care products, steroid hormones, and agrochemicals has been an immense problem for the earth's ecosystem and health impacts. The environmental issues of well-known persistence pollutants, their metabolites, and other micro-pollutants in diverse aquatic systems around the world were collated and exposed in this review assessment. Waste Water Treatment Plant (WWTP) influents and effluents, as well as industrial, hospital, and residential effluents, include detectable concentrations of known and undiscovered persistence pollutants and metabolites. These components have been found in surface water, groundwater, drinking water, and natural water reservoirs receiving treated and untreated effluents. Several studies have found that these persistence pollutants, and also similar recalcitrant pollutants, are hazardous to a variety of non-targeted creatures in the environment. In human and animals, they can also have severe and persistent harmful consequences. Because these pollutants are harmful to aquatic organisms, microbial degradation of these persistence pollutants had the least efficiency. Fortunately, only a few wild and Genetically Modified (GMOs) microbial species have the ability to degrade these PPCPs contaminants. Hence, researchers have been studying the degradation competence of microbial communities in persistence pollutants of Pharmaceutical and Personal Care Products (PPCPs) and respective metabolites for decades, as well as possible degradation processes in various aquatic systems. As a result, this review provides comprehensive information about environmental issues and the degradation of PPCPs and their metabolites, as well as other micro-pollutants, in aquatic systems.
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Affiliation(s)
- Mathiyazhagan Narayanan
- PG and Research Centre in Biotechnology, MGR College, Adhiyamaan Educational and Research Institutions (AERI), Hosur, Krishnagiri, Tamil Nadu, 635 130, India.
| | - Mostafa El-Sheekh
- Botany Department, Faculty of Science, Tanta University, Tanta, 31527, Egypt
| | - Ying Ma
- College of Resources and Environment, Southwest University, Chongqing, China
| | | | | | - Gajendiran Kandasamy
- Department of Microbiology, MGR College, Adhiyamaan Educational and Research Institutions (AERI), Hosur, Krishnagiri, Tamil Nadu, 635 130, India
| | - Rathinam Raja
- Central Research Laboratory, Research and Development Wing, Sree Balaji Medical College and Hospital (SBMCH) - BIHER, Chromepet, Chennai, 600 044, India
| | - R M Saravana Kumar
- Department of Biotechnology, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai, 602105, Tamil Nadu, India
| | - Suresh Kumarasamy
- PG and Research Centre in Biotechnology, MGR College, Adhiyamaan Educational and Research Institutions (AERI), Hosur, Krishnagiri, Tamil Nadu, 635 130, India
| | - Govindasamy Sathiyan
- Department of Chemistry, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai, 602105, Tamil Nadu, India
| | - R Geetha
- Department of Electrical and Electronics Engineering, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai, 602105, Tamil Nadu, India
| | - Balaji Paulraj
- PG and Research Centre in Biotechnology, MGR College, Adhiyamaan Educational and Research Institutions (AERI), Hosur, Krishnagiri, Tamil Nadu, 635 130, India
| | - Guanglong Liu
- State Environmental Protection Key Laboratory of Soil Health and Green Remediation, College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, China
| | - Sabariswaran Kandasamy
- Department of Biomass and Energy Conversion, Institute of Energy and Environmental Engineering, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai - 602 105, India.
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21
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Parmar S, Sharma VK, Li T, Tang W, Li H. Fungal Seed Endophyte FZT214 Improves Dysphania ambrosioides Cd Tolerance Throughout Different Developmental Stages. Front Microbiol 2022; 12:783475. [PMID: 35058903 PMCID: PMC8764135 DOI: 10.3389/fmicb.2021.783475] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2021] [Accepted: 11/25/2021] [Indexed: 11/30/2022] Open
Abstract
Phytoremediation is a promising remediation method of heavy metal (HM)-contaminated soils. However, lower HM tolerance of metal accumulator inhibits its practical application and effects. The current study was aimed to illustrate the role of fungal seed endophyte (FZT214) in improving Dysphania ambrosioides Cd tolerance during different developmental stages under various Cd stresses (5, 15, 30 mg kg-1) by pot experiments. The results showed that FZT214 significantly (p < 0.05) improved the host plant's growth at the flowering and fruiting stage in most of the treatment, while at the growing stage the increase was less (p > 0.05). The seed yield was also improved (p < 0.05) in the FZT214-inoculated plants (E+) and induced early flowering was observed. Moreover, the inoculation also positively affected total chlorophyll content, antioxidant process, and lipid peroxidation in most of the treatments throughout three developmental stages. Not all but in most cases, IAA and GA were more in E+ plants while JA was more in the E- plants (non-inoculated plants) during three developmental stages. The results suggested that the colonization of FZT214 to the D. ambrosioides might trigger multiple and comprehensive protective strategies against Cd stress, which mainly include activation of the dilution effects, induced biochemical changes to overcome damage from Cd toxicity, and alteration of the endogenous phytohormones. FZT214 can find competent application in the future to improve the growth of other crop plants.
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Affiliation(s)
- Shobhika Parmar
- Medical School of Kunming University of Science and Technology, Kunming, China
| | - Vijay K. Sharma
- Medical School of Kunming University of Science and Technology, Kunming, China
| | - Tao Li
- State Key Laboratory for Conservation and Utilization of Bio-resources in Yunnan, Yunnan University, Kunming, China
| | - Wenting Tang
- Medical School of Kunming University of Science and Technology, Kunming, China
| | - Haiyan Li
- Medical School of Kunming University of Science and Technology, Kunming, China
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22
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El-Shahir AA, El-Tayeh NA, Ali OM, Abdel Latef AAH, Loutfy N. The Effect of Endophytic Talaromyces pinophilus on Growth, Absorption and Accumulation of Heavy Metals of Triticum aestivum Grown on Sandy Soil Amended by Sewage Sludge. PLANTS (BASEL, SWITZERLAND) 2021; 10:2659. [PMID: 34961130 PMCID: PMC8704920 DOI: 10.3390/plants10122659] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Revised: 11/22/2021] [Accepted: 11/29/2021] [Indexed: 05/24/2023]
Abstract
Sewage sludge improves agricultural soil and plant growth, but there are risks associated with its use, including high heavy metal content. In this study, experiments were carried out to investigate the role of endophytic Talaromyces pinophilus MW695526 on the growth of Triticum aestivum cultivated in soil amended with sewage sludge and its phytoremediation ability. T. pinophilus could produce gibberellic acid (GA) and stimulate T. aestivum to accumulate GA. The results showed that inoculation with T. pinophilus boosted plant growth criteria, photosynthetic pigments, osmolytes (soluble proteins, soluble sugars and total amino acids), enzymatic antioxidants (catalase, superoxide dismutase and peroxidase), K, Ca and Mg. On the other hand, it reduced Na, Na/K ratio, Cd, Ni, Cu and Zn in the growth media as well as in the shoot and root of T. aestivum. The results suggest that endophytic T. pinophilus can work as a barrier to reduce the absorption of heavy metals in T. aestivum cultivated in soil amended with sewage sludge.
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Affiliation(s)
- Amany A. El-Shahir
- Department of Botany and Microbiology, Faculty of Science, South Valley University, Qena 83523, Egypt; (N.A.E.-T.); (N.L.)
| | - Noha A. El-Tayeh
- Department of Botany and Microbiology, Faculty of Science, South Valley University, Qena 83523, Egypt; (N.A.E.-T.); (N.L.)
| | - Omar M. Ali
- Department of Chemistry, Turabah University College, Turabah Branch, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia;
| | - Arafat Abdel Hamed Abdel Latef
- Department of Botany and Microbiology, Faculty of Science, South Valley University, Qena 83523, Egypt; (N.A.E.-T.); (N.L.)
| | - Naglaa Loutfy
- Department of Botany and Microbiology, Faculty of Science, South Valley University, Qena 83523, Egypt; (N.A.E.-T.); (N.L.)
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23
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Cecchi G, Di Piazza S, Rosatto S, Mariotti MG, Roccotiello E, Zotti M. A Mini-Review on the Co-growth and Interactions Among Microorganisms (Fungi and Bacteria) From Rhizosphere of Metal-Hyperaccumulators. FRONTIERS IN FUNGAL BIOLOGY 2021; 2:787381. [PMID: 37744132 PMCID: PMC10512210 DOI: 10.3389/ffunb.2021.787381] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 10/27/2021] [Indexed: 09/26/2023]
Abstract
The co-growth and synergistic interactions among fungi and bacteria from the rhizosphere of plants able to hyper accumulate potentially toxic metals (PTMs) are largely unexplored. Fungi and bacteria contribute in an essential way to soil biogeochemical cycles mediating the nutrition, growth development, and health of associated plants at the rhizosphere level. Microbial consortia improve the formation of soil aggregates and soil fertility, producing organic acids and siderophores that increase solubility, mobilization, and consequently the accumulation of nutrients and metals from the rhizosphere. These microorganism consortia can both mitigate the soil conditions promoting plant colonization and increase the performance of hyperaccumulator plants. Indeed, microfungi and bacteria from metalliferous soils or contaminated matrices are commonly metal-tolerant and can play a key role for plants in the phytoextraction or phytostabilization of metals. However, few works deepen the effects of the inoculation of microfungal and bacterial consortia in the rhizosphere of metallophytes and their synergistic activity. This mini-review aimed to collect and report the data regarding the role of microbial consortia and their potentialities known to date. Moreover, our new data had shown an active fungal-bacteria consortium in the rhizosphere of the hyperaccumulator plant Alyssoides utriculata.
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Affiliation(s)
- Grazia Cecchi
- Laboratory of Mycology, Department of Earth, Environment and Life Sciences, University of Genoa, Genoa, Italy
| | - Simone Di Piazza
- Laboratory of Mycology, Department of Earth, Environment and Life Sciences, University of Genoa, Genoa, Italy
| | - Stefano Rosatto
- Laboratory of Plant Biology, Department of Earth, Environment and Life Sciences, University of Genoa, Genoa, Italy
| | - Mauro Giorgio Mariotti
- Laboratory of Plant Biology, Department of Earth, Environment and Life Sciences, University of Genoa, Genoa, Italy
| | - Enrica Roccotiello
- Laboratory of Plant Biology, Department of Earth, Environment and Life Sciences, University of Genoa, Genoa, Italy
| | - Mirca Zotti
- Laboratory of Mycology, Department of Earth, Environment and Life Sciences, University of Genoa, Genoa, Italy
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24
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Liu X, Zhou ZY, Cui JL, Wang ML, Wang JH. Biotransformation ability of endophytic fungi: from species evolution to industrial applications. Appl Microbiol Biotechnol 2021; 105:7095-7113. [PMID: 34499202 PMCID: PMC8426592 DOI: 10.1007/s00253-021-11554-x] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Revised: 08/24/2021] [Accepted: 08/25/2021] [Indexed: 12/26/2022]
Abstract
Abstract Increased understanding of the interactions between endophytic fungi and plants has led to the discovery of a new generation of chemical compounds and processes between endophytic fungi and plants. Due to the long-term co-evolution between fungal endophytes and host plants, endophytes have evolved special biotransformation abilities, which can have critical consequences on plant metabolic processes and their composition. Biotransformation or bioconversion can impact the synthesis and decomposition of hormones, sugars, amino acids, vitamins, lipids, proteins, and various secondary metabolites, including flavonoids, polysaccharides, and terpenes. Endophytic fungi produce enzymes and various bioactive secondary metabolites with industrial value and can degrade or sequester inorganic and organic small molecules and macromolecules (e.g., toxins, pollutants, heavy metals). These fungi also have the ability to cause highly selective catalytic conversion of high-value compounds in an environmentally friendly manner, which can be important for the production/innovation of bioactive molecules, food and nutrition, agriculture, and environment. This work mainly summarized recent research progress in this field, providing a reference for further research and application of fungal endophytes. Key points •The industrial value of degradation of endophytes was summarized. • The commercial value for the pharmaceutical industry is reviewed. Graphical abstract ![]()
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Affiliation(s)
- Xi Liu
- Institute of Applied Chemistry, Shanxi University, Taiyuan, 030006, Shanxi, China.,Modern Research Center for Traditional Chinese Medicine, The Key Laboratory of Chemical Biology and Molecular Engineering of Ministry of Education, Shanxi University, Taiyuan, 030006, Shanxi, China
| | - Zhong-Ya Zhou
- Institute of Applied Chemistry, Shanxi University, Taiyuan, 030006, Shanxi, China.,Modern Research Center for Traditional Chinese Medicine, The Key Laboratory of Chemical Biology and Molecular Engineering of Ministry of Education, Shanxi University, Taiyuan, 030006, Shanxi, China
| | - Jin-Long Cui
- Institute of Applied Chemistry, Shanxi University, Taiyuan, 030006, Shanxi, China.
| | - Meng-Liang Wang
- Institute of Applied Chemistry, Shanxi University, Taiyuan, 030006, Shanxi, China
| | - Jun-Hong Wang
- Institute of Applied Chemistry, Shanxi University, Taiyuan, 030006, Shanxi, China
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25
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Barra Caracciolo A, Terenzi V. Rhizosphere Microbial Communities and Heavy Metals. Microorganisms 2021; 9:microorganisms9071462. [PMID: 34361898 PMCID: PMC8307176 DOI: 10.3390/microorganisms9071462] [Citation(s) in RCA: 64] [Impact Index Per Article: 21.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2021] [Revised: 07/05/2021] [Accepted: 07/06/2021] [Indexed: 12/13/2022] Open
Abstract
The rhizosphere is a microhabitat where there is an intense chemical dialogue between plants and microorganisms. The two coexist and develop synergistic actions, which can promote plants’ functions and productivity, but also their capacity to respond to stress conditions, including heavy metal (HM) contamination. If HMs are present in soils used for agriculture, there is a risk of metal uptake by edible plants with subsequent bioaccumulation in humans and animals and detrimental consequences for their health. Plant productivity can also be negatively affected. Many bacteria have defensive mechanisms for resisting heavy metals and, through various complex processes, can improve plant response to HM stress. Bacteria-plant synergic interactions in the rhizosphere, as a homeostatic ecosystem response to HM disturbance, are common in soil. However, this is hard to achieve in agroecosystems managed with traditional practices, because concentrating on maximizing crop yield does not make it possible to establish rhizosphere interactions. Improving knowledge of the complex interactions mediated by plant exudates and secondary metabolites can lead to nature-based solutions for plant health in HM contaminated soils. This paper reports the main ecotoxicological effects of HMs and the various compounds (including several secondary metabolites) produced by plant-microorganism holobionts for removing, immobilizing and containing toxic elements.
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26
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Li Y, Ye H, Song L, Vuong TD, Song Q, Zhao L, Shannon JG, Li Y, Nguyen HT. Identification and characterization of novel QTL conferring internal detoxification of aluminium in soybean. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:4993-5009. [PMID: 33893801 DOI: 10.1093/jxb/erab168] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Accepted: 04/22/2021] [Indexed: 06/12/2023]
Abstract
Aluminium (Al) toxicity inhibits soybean root growth, leading to insufficient water and nutrient uptake. Two soybean lines ('Magellan' and PI 567731) were identified differing in Al tolerance, as determined by primary root length ratio, total root length ratio, and root tip number ratio under Al stress. Serious root necrosis was observed in PI 567731, but not in Magellan under Al stress. An F8 recombinant inbred line population derived from a cross between Magellan and PI 567731 was used to map the quantitative trait loci (QTL) for Al tolerance. Three QTL on chromosomes 3, 13, and 20, with tolerant alleles from Magellan, were identified. qAl_Gm13 and qAl_Gm20 explained large phenotypic variations (13-27%) and helped maintain root elongation and initiation under Al stress. In addition, qAl_Gm13 and qAl_Gm20 were confirmed in near-isogenic backgrounds and were identified to epistatically regulate Al tolerance via internal detoxification instead of Al3+ exclusion. Phylogenetic and pedigree analysis identified the tolerant alleles of both loci derived from the US ancestral line, A.K.[FC30761], originally from China. Our results provide novel genetic resources for breeding Al-tolerant soybean and suggest that internal detoxification contributes to soybean tolerance to excessive soil Al.
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Affiliation(s)
- Yang Li
- National Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Key Laboratory for Biology and Genetic Improvement of Soybean (General, Ministry of Agriculture), Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing, China
- Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, USA
| | - Heng Ye
- Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, USA
| | - Li Song
- Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, USA
- Joint International Research Laboratory of Agriculture and Agri-Product Safety, Institutes of Agricultural Science and Technology Development, Yangzhou University, Yangzhou, China
| | - Tri D Vuong
- Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, USA
| | - Qijian Song
- Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD, USA
| | - Lijuan Zhao
- National Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Key Laboratory for Biology and Genetic Improvement of Soybean (General, Ministry of Agriculture), Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing, China
| | - J Grover Shannon
- Division of Plant Sciences, University of Missouri-Fisher Delta Research Center, Portageville, MO, USA
| | - Yan Li
- National Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Key Laboratory for Biology and Genetic Improvement of Soybean (General, Ministry of Agriculture), Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing, China
| | - Henry T Nguyen
- Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, USA
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27
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Nabi RBS, Tayade R, Hussain A, Adhikari A, Lee IJ, Loake GJ, Yun BW. A Novel DUF569 Gene Is a Positive Regulator of the Drought Stress Response in Arabidopsis. Int J Mol Sci 2021; 22:ijms22105316. [PMID: 34070080 PMCID: PMC8158135 DOI: 10.3390/ijms22105316] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2021] [Revised: 05/09/2021] [Accepted: 05/10/2021] [Indexed: 12/30/2022] Open
Abstract
In the last two decades, global environmental change has increased abiotic stress on plants and severely affected crops. For example, drought stress is a serious abiotic stress that rapidly and substantially alters the morphological, physiological, and molecular responses of plants. In Arabidopsis, several drought-responsive genes have been identified; however, the underlying molecular mechanism of drought tolerance in plants remains largely unclear. Here, we report that the “domain of unknown function” novel gene DUF569 (AT1G69890) positively regulates drought stress in Arabidopsis. The Arabidopsis loss-of-function mutant atduf569 showed significant sensitivity to drought stress, i.e., severe wilting at the rosette-leaf stage after water was withheld for 3 days. Importantly, the mutant plant did not recover after rewatering, unlike wild-type (WT) plants. In addition, atduf569 plants showed significantly lower abscisic acid accumulation under optimal and drought-stress conditions, as well as significantly higher electrolyte leakage when compared with WT Col-0 plants. Spectrophotometric analyses also indicated a significantly lower accumulation of polyphenols, flavonoids, carotenoids, and chlorophylls in atduf569 mutant plants. Overall, our results suggest that novel DUF569 is a positive regulator of the response to drought in Arabidopsis.
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Affiliation(s)
- Rizwana Begum Syed Nabi
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (R.B.S.N.); (R.T.); (A.A.); (I.-J.L.)
- Department of Southern Area Crop Science, National Institute of Crop Science, Rural Development Administration, Miryang 50424, Korea
| | - Rupesh Tayade
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (R.B.S.N.); (R.T.); (A.A.); (I.-J.L.)
| | - Adil Hussain
- Department of Agriculture, Abdul Wali Khan University, Mardan 230200, Pakistan;
| | - Arjun Adhikari
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (R.B.S.N.); (R.T.); (A.A.); (I.-J.L.)
| | - In-Jung Lee
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (R.B.S.N.); (R.T.); (A.A.); (I.-J.L.)
| | - Gary J. Loake
- Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, King’s Buildings, Edinburgh EH9 3JH, UK
- Correspondence: (G.J.L.); (B.-W.Y.)
| | - Byung-Wook Yun
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (R.B.S.N.); (R.T.); (A.A.); (I.-J.L.)
- Correspondence: (G.J.L.); (B.-W.Y.)
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28
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Syed Nabi RB, Shahzad R, Tayade R, Shahid M, Hussain A, Ali MW, Yun BW. Evaluation potential of PGPR to protect tomato against Fusarium wilt and promote plant growth. PeerJ 2021; 9:e11194. [PMID: 33959416 PMCID: PMC8054735 DOI: 10.7717/peerj.11194] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2020] [Accepted: 03/09/2021] [Indexed: 12/30/2022] Open
Abstract
Soilborne fungal diseases are most common among vegetable crops and have major implications for crop yield and productivity. Eco-friendly sustainable agriculture practices that can overcome biotic and abiotic stresses are of prime importance. In this study, we evaluated the ability of plant growth-promoting rhizobacterium (PGPR) Bacillus aryabhattai strain SRB02 to control the effects of tomato wilt disease caused by Fusarium oxysporum f. sp. lycopersici (strain KACC40032) and promote plant growth. In vitro bioassays showed significant inhibition of fungal growth by SRB02. Inoculation of susceptible and tolerant tomato cultivars in the presence of SRB02 showed significant protection of the cultivar that was susceptible to infection and promotion of plant growth and biomass production in both of the cultivars. Further analysis of SRB02-treated plants revealed a significantly higher production of amino acids following infection by F. oxysporum. Analysis of plant defense hormones after inoculation by the pathogen revealed a significantly higher accumulation of salicylic acid (SA), with a concomitant reduction in jasmonic acid (JA). These results indicate that B. aryabhattai strain SRB02 reduces the effects of Fusarium wilt disease in tomato by modulating endogenous phytohormones and amino acid levels.
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Affiliation(s)
- Rizwana Begum Syed Nabi
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National University, Daegu, South Korea.,Department of Southern Area Crop Science, National Institute of Crop Science, Rural; Development Administration, Miryang, South Korea
| | - Raheem Shahzad
- Department of Horticulture, The University of Haripur, Haripur, Pakistan
| | - Rupesh Tayade
- Laboratory of Plant Breeding, School of Applied Biosciences, Kyungpook National University, Daegu, South Korea
| | - Muhammad Shahid
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National University, Daegu, South Korea
| | - Adil Hussain
- Department of Agriculture,, Abdul Wali Khan University, Mardan, Pakistan
| | - Muhammad Waqas Ali
- School of Biosciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom
| | - Byung-Wook Yun
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National University, Daegu, South Korea
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29
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Deciphering Trichoderma-Plant-Pathogen Interactions for Better Development of Biocontrol Applications. J Fungi (Basel) 2021; 7:jof7010061. [PMID: 33477406 PMCID: PMC7830842 DOI: 10.3390/jof7010061] [Citation(s) in RCA: 72] [Impact Index Per Article: 24.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2020] [Revised: 12/31/2020] [Accepted: 01/02/2021] [Indexed: 12/18/2022] Open
Abstract
Members of the fungal genus Trichoderma (Ascomycota, Hypocreales, Hypocreaceae) are ubiquitous and commonly encountered as soil inhabitants, plant symbionts, saprotrophs, and mycoparasites. Certain species have been used to control diverse plant diseases and mitigate negative growth conditions. The versatility of Trichoderma’s interactions mainly relies on their ability to engage in inter- and cross-kingdom interactions. Although Trichoderma is by far the most extensively studied fungal biocontrol agent (BCA), with a few species already having been commercialized as bio-pesticides or bio-fertilizers, their wide application has been hampered by an unpredictable efficacy under field conditions. Deciphering the dialogues within and across Trichoderma ecological interactions by identification of involved effectors and their underlying effect is of great value in order to be able to eventually harness Trichoderma’s full potential for plant growth promotion and protection. In this review, we focus on the nature of Trichoderma interactions with plants and pathogens. Better understanding how Trichoderma interacts with plants, other microorganisms, and the environment is essential for developing and deploying Trichoderma-based strategies that increase crop production and protection.
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30
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31
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Kang SM, Bilal S, Shahzad R, Kim YN, Park CW, Lee KE, Lee JR, Lee IJ. Effect of Ammonia and Indole-3-acetic Acid Producing Endophytic Klebsiella pneumoniae YNA12 as a Bio-Herbicide for Weed Inhibition: Special Reference with Evening Primroses. PLANTS (BASEL, SWITZERLAND) 2020; 9:E761. [PMID: 32570708 PMCID: PMC7355527 DOI: 10.3390/plants9060761] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/22/2020] [Revised: 06/12/2020] [Accepted: 06/12/2020] [Indexed: 11/23/2022]
Abstract
Information on the use of endophytic bacteria as a bio-herbicide for the management of weed control in agricultural fields is limited. The current study aimed to isolate endophytic bacteria from evening primroses and to screen them for their bio-herbicidal activity. Two isolated endophytic bacteria (Pantoea dispersa YNA11 and Klebsiella pneumoniae YNA12) were initially screened for citrate utilization and for indole-3-acetic acid (IAA) and catalase production. The preliminary biochemical assessment showed YNA12 as a positive strain. Ammonia, catalase, and IAA in its culture filtrate were quantified. Gas Chromatography/Mass Spectroscopy- Selective Ion Monitoring (GC/MS-SIM) analysis revealed the production of IAA by YNA12 in a time-dependent manner. YNA12 also exhibited significant ammonia-producing potential and catalase activity against hydrogen peroxide. The YNA12 culture filtrate significantly inhibited the germination rate of evening primrose seeds, resulting in a marked reduction in seedling length and biomass compared with those of the control seeds. Moreover, the culture filtrate of YNA12 significantly accelerated the endogenous abscisic acid (ABA) production and catalase activity of evening primrose seedlings. Macronutrient regulation was adversely affected in the seedlings exposed to the culture filtrate of YNA12, leading to inhibition of seed germination. The current results suggest that endophytic YNA12 may be used as a potent bio-herbicidal agent for controlling weed growth and development.
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Affiliation(s)
- Sang-Mo Kang
- Institute of Agricultural Science and Technology, Kyungpook National University, Daegu 41566, Korea;
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (Y.-N.K.); (C.-W.P.); (K.-E.L.)
| | - Saqib Bilal
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman;
| | - Raheem Shahzad
- Basic and Applied Scientific Research Center, Imam Abdulrahman Bin Faisal University, Dammam 31441, Saudi Arabia;
- Department of Biology, College of Science, Imam Abdulrahman Bin Faisal University, Dammam 31441, Saudi Arabia
| | - Yu-Na Kim
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (Y.-N.K.); (C.-W.P.); (K.-E.L.)
| | - Chang-Wook Park
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (Y.-N.K.); (C.-W.P.); (K.-E.L.)
| | - Ko-Eun Lee
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (Y.-N.K.); (C.-W.P.); (K.-E.L.)
| | - Jeong-Ran Lee
- Crop Protection Division, National Institute of Agricultural Science, RDA, Wanju 55365, Korea;
| | - In-Jung Lee
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (Y.-N.K.); (C.-W.P.); (K.-E.L.)
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Khan A, Khan AL, Imran M, Asaf S, Kim YH, Bilal S, Numan M, Al-Harrasi A, Al-Rawahi A, Lee IJ. Silicon-induced thermotolerance in Solanum lycopersicum L. via activation of antioxidant system, heat shock proteins, and endogenous phytohormones. BMC PLANT BIOLOGY 2020; 20:248. [PMID: 32493420 PMCID: PMC7268409 DOI: 10.1186/s12870-020-02456-7] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2019] [Accepted: 05/21/2020] [Indexed: 05/08/2023]
Abstract
BACKGROUND Abiotic stresses (e.g., heat or limited water and nutrient availability) limit crop production worldwide. With the progression of climate change, the severity and variation of these stresses are expected to increase. Exogenous silicon (Si) has shown beneficial effects on plant growth; however, its role in combating the negative effects of heat stress and their underlying molecular dynamics are not fully understood. RESULTS Exogenous Si significantly mitigated the adverse impact of heat stress by improving tomato plant biomass, photosynthetic pigments, and relative water content. Si induced stress tolerance by decreasing the concentrations of superoxide anions and malondialdehyde, as well as mitigating oxidative stress by increasing the gene expression for antioxidant enzymes (peroxidases, catalases, ascorbate peroxidases, superoxide dismutases, and glutathione reductases) under stress conditions. This was attributed to increased Si uptake in the shoots via the upregulation of low silicon (SlLsi1 and SlLsi2) gene expression under heat stress. Interestingly, Si stimulated the expression and transcript accumulation of heat shock proteins by upregulating heat transcription factors (Hsfs) such as SlHsfA1a-b, SlHsfA2-A3, and SlHsfA7 in tomato plants under heat stress. On the other hand, defense and stress signaling-related endogenous phytohormones (salicylic acid [SA]/abscisic acid [ABA]) exhibited a decrease in their concentration and biosynthesis following Si application. Additionally, the mRNA and gene expression levels for SA (SlR1b1, SlPR-P2, SlICS, and SlPAL) and ABA (SlNCEDI) were downregulated after exposure to stress conditions. CONCLUSION Si treatment resulted in greater tolerance to abiotic stress conditions, exhibiting higher plant growth dynamics and molecular physiology by regulating the antioxidant defense system, SA/ABA signaling, and Hsfs during heat stress.
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Affiliation(s)
- Adil Khan
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa, 616, Oman
| | - Abdul Latif Khan
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa, 616, Oman.
| | - Muhammad Imran
- School of Applied Biosciences, Kyungpook National University, Daegu, 41566, South Korea
| | - Sajjad Asaf
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa, 616, Oman
| | - Yoon-Ha Kim
- School of Applied Biosciences, Kyungpook National University, Daegu, 41566, South Korea
| | - Saqib Bilal
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa, 616, Oman
| | - Muhammad Numan
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa, 616, Oman
| | - Ahmed Al-Harrasi
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa, 616, Oman.
| | - Ahmed Al-Rawahi
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa, 616, Oman
| | - In-Jung Lee
- School of Applied Biosciences, Kyungpook National University, Daegu, 41566, South Korea
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Silicon and Gibberellins: Synergistic Function in Harnessing ABA Signaling and Heat Stress Tolerance in Date Palm ( Phoenix dactylifera L.). PLANTS 2020; 9:plants9050620. [PMID: 32413955 PMCID: PMC7285242 DOI: 10.3390/plants9050620] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/13/2020] [Revised: 04/09/2020] [Accepted: 04/20/2020] [Indexed: 12/17/2022]
Abstract
Date palm is one of the most economically vital fruit crops in North African and Middle East countries, including Oman. A controlled experiment was conducted to investigate the integrative effects of silicon (Si) and gibberellic acid (GA3) on date palm growth and heat stress. The exogenous application of Si and GA3 significantly promoted plant growth attributes under heat stress (44 ± 1 °C). The hormonal modulation (abscisic acid [ABA] and salicylic acid [SA]), antioxidant accumulation, and the expression of abiotic stress-related genes were evaluated. Interestingly, heat-induced oxidative stress was markedly reduced by the integrative effects of Si and GA3 when compared to their sole application, with significant reductions in superoxide anions and lipid peroxidation. The reduction of oxidative stress was attributed to the enhancement of polyphenol oxidase, catalase, peroxidase, and ascorbate peroxidase activities as well as the upregulation of their synthesis related genes expression viz. GPX2, CAT, Cyt-Cu/Zn SOD, and glyceraldehyde3-phosphate dehydrogenase gene (GAPDH). The results showed the activation of heat shock factor related genes (especially HsfA3) during exogenous Si and GA3 as compared to the control. Furthermore, the transcript accumulation of ABA signaling-related genes (PYL4, PYL8, and PYR1) were significantly reduced with the combined treatment of Si and GA3, leading to reduced production of ABA and, subsequently, SA antagonism via its increased accumulation. These findings suggest that the combined application of Si and GA3 facilitate plant growth and metabolic regulation, impart tolerance against stress, and offers novel stress alleviating strategies for a green revolution in sustainable food security.
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Kang SM, Asaf S, Khan AL, Lubna, Khan A, Mun BG, Khan MA, Gul H, Lee IJ. Complete Genome Sequence of Pseudomonas psychrotolerans CS51, a Plant Growth-Promoting Bacterium, Under Heavy Metal Stress Conditions. Microorganisms 2020; 8:E382. [PMID: 32182882 PMCID: PMC7142416 DOI: 10.3390/microorganisms8030382] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2020] [Revised: 02/26/2020] [Accepted: 03/03/2020] [Indexed: 12/02/2022] Open
Abstract
In the current study, we aimed to elucidate the plant growth-promoting characteristics of Pseudomonas psychrotolerans CS51 under heavy metal stress conditions (Zn, Cu, and Cd) and determine the genetic makeup of the CS51 genome using the single-molecule real-time (SMRT) sequencing technology of Pacific Biosciences. The results revealed that inoculation with CS51 induced endogenous indole-3-acetic acid (IAA) and gibberellins (GAs), which significantly enhanced cucumber growth (root shoot length) and increased the heavy metal tolerance of cucumber plants. Moreover, genomic analysis revealed that the CS51 genome consisted of a circular chromosome of 5,364,174 base pairs with an average G+C content of 64.71%. There were around 4774 predicted protein-coding sequences (CDSs) in 4859 genes, 15 rRNA genes, and 67 tRNA genes. Around 3950 protein-coding genes with function prediction and 733 genes without function prediction were identified. Furthermore, functional analyses predicted that the CS51 genome could encode genes required for auxin biosynthesis, nitrate and nitrite ammonification, the phosphate-specific transport system, and the sulfate transport system, which are beneficial for plant growth promotion. The heavy metal resistance of CS51 was confirmed by the presence of genes responsible for cobalt-zinc-cadmium resistance, nickel transport, and copper homeostasis in the CS51 genome. The extrapolation of the curve showed that the core genome contained a minimum of 2122 genes (95% confidence interval = 2034.24 to 2080.215). Our findings indicated that the genome sequence of CS51 may be used as an eco-friendly bioresource to promote plant growth in heavy metal-contaminated areas.
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Affiliation(s)
- Sang-Mo Kang
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.-M.K.); (B.-G.M.); (M.A.K.)
| | - Sajjad Asaf
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman; (S.A.); (A.L.K.); (A.K.)
| | - Abdul Latif Khan
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman; (S.A.); (A.L.K.); (A.K.)
| | - Lubna
- Department of Botany, Garden Campus, Abdul Wali Khan University Mardan, Mardan 23200, Pakistan; (L.); (H.G.)
| | - Adil Khan
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman; (S.A.); (A.L.K.); (A.K.)
| | - Bong-Gyu Mun
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.-M.K.); (B.-G.M.); (M.A.K.)
| | - Muhammad Aaqil Khan
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.-M.K.); (B.-G.M.); (M.A.K.)
| | - Humaira Gul
- Department of Botany, Garden Campus, Abdul Wali Khan University Mardan, Mardan 23200, Pakistan; (L.); (H.G.)
| | - In-Jung Lee
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.-M.K.); (B.-G.M.); (M.A.K.)
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Khan A, Bilal S, Khan AL, Imran M, Al-Harrasi A, Al-Rawahi A, Lee IJ. Silicon-mediated alleviation of combined salinity and cadmium stress in date palm (Phoenix dactylifera L.) by regulating physio-hormonal alteration. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2020; 188:109885. [PMID: 31704322 DOI: 10.1016/j.ecoenv.2019.109885] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2019] [Revised: 10/23/2019] [Accepted: 10/26/2019] [Indexed: 06/10/2023]
Abstract
We investigated the physio-molecular effects of separate and combined cadmium (Cd; 200 μM) and salinity (NaCl; 100 mM) stress on date palm during silicon (Si; 1.0 mM) applications. The results showed that exogenous Si led to significant improvements in plant growth, as well as physiology when compared with non-Si-treated seedling under stressed (Cd/NaCl) conditions. Interestingly, Si application led to lower metal (Cd) uptake and enhanced plant macronutrient uptake under combined stress, in turn, alleviating the combined salinity- and Cd-induced oxidative stress by lowering the lipid peroxidation rate, and peroxidase and catalase activities. Furthermore, ascorbate peroxidase level and the cytosolic Cu/Zn superoxide dismutase expression were significantly enhanced by Si application under combined stress. We further analyzed the effect of Si on modulation of stress-related hormonal crosstalk. Si markedly downregulated endogenous salicylic acid, jasmonic acid, and abscisic acid under NaCl stress and combined NaCl-Cd stress. However, during Cd toxicity alone, Si showed varying accumulation of these phytohormones. The results suggest that hindering the Cd uptake and enhancing silicon accumulation ultimately led to improvement of biomass and efficiency of the antioxidant system for alleviating combined stress. Moreover, higher transcript accumulation of PROLINE TRANSPORTER 2 and GAPDH and downregulation of ABA RECEPTOR by Si treatment under combined stress in date palm seedlings indicate the stress-ameliorative role of Si. The study provides evidence of the positive influence of Si on alleviating the combined toxicity of Cd and NaCl in date palm and can be further extended for field trials in Cd- and salinity-affected areas.
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Affiliation(s)
- Adil Khan
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa, Oman
| | - Saqib Bilal
- School of Applied Biosciences, Kyungpook National University, Daegu, South Korea
| | - Abdul Latif Khan
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa, Oman.
| | - Muhammad Imran
- School of Applied Biosciences, Kyungpook National University, Daegu, South Korea
| | - Ahmed Al-Harrasi
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa, Oman.
| | - Ahmed Al-Rawahi
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa, Oman
| | - In-Jung Lee
- School of Applied Biosciences, Kyungpook National University, Daegu, South Korea.
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Arsenic accumulation by a rhizosphere bacterial strain Ochrobactrum tritici reduces rice plant arsenic levels. World J Microbiol Biotechnol 2020; 36:23. [DOI: 10.1007/s11274-020-2800-0] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2019] [Accepted: 01/08/2020] [Indexed: 01/26/2023]
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Khan A, Kamran M, Imran M, Al-Harrasi A, Al-Rawahi A, Al-Amri I, Lee IJ, Khan AL. Silicon and salicylic acid confer high-pH stress tolerance in tomato seedlings. Sci Rep 2019; 9:19788. [PMID: 31874969 PMCID: PMC6930214 DOI: 10.1038/s41598-019-55651-4] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2019] [Accepted: 11/28/2019] [Indexed: 12/17/2022] Open
Abstract
Alkalinity is a known threat to crop plant growth and production, yet the role of exogenous silicon (Si) and salicylic acid (SA) application has been largely unexplored. Here, we sought to understand the beneficial impacts of Si and SA on tomato seedlings during high-pH (9.0) stress. Results showed that Si- and SA-treated plants displayed higher biomass, chlorophyll contents, relative leaf water and better root system than none-treated plants under alkaline conditions. Both Si and SA counteracted the alkaline stress-induced oxidative damage by lowering the accumulation of reactive oxygen species and lipid peroxidation. The major antioxidant defence enzyme activities were largely stimulated by Si and SA, and these treatments caused significantly increased K+ and lowered Na+ concentrations in shoot and root under stress. Moreover, Si and SA treatments modulated endogenous SA levels and dramatically decreased abscisic acid levels in both shoot and root. Additionally, key genes involved in Si uptake, SA biosynthesis, the antioxidant defence system and rhizosphere acidification were up-regulated in Si and SA treatments under alkaline conditions. These results demonstrate that Si and SA play critical roles in improving alkaline stress tolerance in tomato seedlings, by modifying the endogenous Na+ and K+ contents, regulating oxidative damage and key genes and modulating endogenous hormone levels. These findings will help to broaden our understanding regarding the physiological and molecular mechanisms associated with the alkaline soil tolerance in plants.
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Affiliation(s)
- Adil Khan
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa, 616, Oman
| | - Muhammad Kamran
- Plant Transport and Signalling Lab, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
- School of Biological Sciences, Seoul National University, Seoul, Republic of Korea
| | - Muhammad Imran
- School of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea
| | - Ahmed Al-Harrasi
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa, 616, Oman.
| | - Ahmed Al-Rawahi
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa, 616, Oman
| | - Issa Al-Amri
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa, 616, Oman
| | - In-Jung Lee
- School of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea.
| | - Abdul Latif Khan
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa, 616, Oman.
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