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Saeed Q, Mustafa A, Ali S, Tobiloba LH, Rebi A, Baloch SB, Mumtaz MZ, Naveed M, Farooq M, Lu X. Advancing crop resilience through nucleic acid innovations: rhizosphere engineering for food security and climate adaptation. Int J Biol Macromol 2025; 310:143194. [PMID: 40254202 DOI: 10.1016/j.ijbiomac.2025.143194] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2025] [Revised: 04/04/2025] [Accepted: 04/14/2025] [Indexed: 04/22/2025]
Abstract
Rhizosphere engineering has emerged as a transformative strategy to address the pressing challenges of climate change, food security, and environmental sustainability. By harnessing the dynamic interactions between plants and microbes, and environmental processes, this approach offers innovative solutions for enhancing crop production, protecting against pests and diseases, and remediating contaminated environments. This review explores how rhizosphere engineering, both plant-based and microbe-based, can be leveraged to enhance crop productivity, manage pests and diseases, and remediate contaminated environments under shifting climate conditions. We examine the effects of climate change drivers such as elevated CO2, increased N deposition, rising temperatures, and altered precipitation patterns, on plant-microbe interactions and rhizosphere processes. We show that climate change impacts key functions, including respiration, decomposition and stabilization of soil organic matter, nutrient cycling, greenhouse gas emissions, and microbial community dynamics. Despite these challenges, engineered rhizospheres can mitigate adverse effects of climate change by improving rhizodeposition, nitrogen fixation, root architecture modification, selective microbe recruitment, and pathogen control, while enhancing carbon allocation and stabilization in soil. However, the deployment of these technologies is not without challenges. Ecological risks, such as unintended gene transfer and disruption of native microbial communities, as well as socioeconomic barriers, must be carefully addressed to ensure safe and scalable implementation. We identify critical research gaps such as the limited understanding of multi-taxon cooperation and scalability in engineered rhizosphere systems, and how mechanistic understanding of designer plants and microbes can advance crop production, protection, and environmental remediation in agriculture and agroforestry under global changes.
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Affiliation(s)
- Qudsia Saeed
- Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China; Key Laboratory of National Forestry and Grassland Administration on Plant Conservation and Utilization in Southern China, Guangzhou, Guangdong, 510650, China
| | - Adnan Mustafa
- Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China; Key Laboratory of National Forestry and Grassland Administration on Plant Conservation and Utilization in Southern China, Guangzhou, Guangdong, 510650, China
| | - Shahzaib Ali
- Department of Agroecosystems, Faculty of Agriculture and Technology, University of South Bohemia in Ceske Budejovice, Branišovská 1645/31A, 37005 Ceske Budejovice, Czech Republic
| | - Lasisi Hammed Tobiloba
- Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China; Key Laboratory of National Forestry and Grassland Administration on Plant Conservation and Utilization in Southern China, Guangzhou, Guangdong, 510650, China
| | - Ansa Rebi
- Jianshui Research Station, School of Soil and Water Conservation, Beijing Forestry University, Beijing 100083, PR China
| | - Sadia Babar Baloch
- Department of Agroecosystems, Faculty of Agriculture and Technology, University of South Bohemia in Ceske Budejovice, Branišovská 1645/31A, 37005 Ceske Budejovice, Czech Republic
| | | | - Muhammad Naveed
- Institute of Soil and Environmental Sciences, University of Agriculture Faisalabad, 38040, Pakistan
| | - Muhammad Farooq
- Department of Plant Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, Al-Khoud 123, Oman
| | - Xiankai Lu
- Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China; Key Laboratory of National Forestry and Grassland Administration on Plant Conservation and Utilization in Southern China, Guangzhou, Guangdong, 510650, China.
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O'Rourke JA, Vincent SA, Williams IEI, Gascoyne EL, Devlin PF. Phytochrome-mediated shade avoidance responses impact the structure and composition of the bacterial phyllosphere microbiome of Arabidopsis. ENVIRONMENTAL MICROBIOME 2025; 20:20. [PMID: 39915883 PMCID: PMC11800596 DOI: 10.1186/s40793-025-00679-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/27/2024] [Accepted: 01/28/2025] [Indexed: 02/09/2025]
Abstract
The shade avoidance response triggers a dramatic promotion of elongation growth, accompanied by a significant reprogramming of metabolic pathways as plants seek to prevent overtopping and adapt to vegetative shade. Here we demonstrate that simulated vegetative shade results in significant changes in the structure and composition of the phyllosphere bacterial microbiome. Our study uncovered significant shifts in the diversity, occurrence, abundance and activity of bacteria within the phyllosphere microbiome. A comparison of responses in both wild-type plants and phytochrome mutants, which inherently exhibit a shade-avoidance phenotype, revealed both indirect responses to host plant physiology and direct responses to light among the microbiota. Hierarchical clustering of response patterns further suggested that over a third of the taxa constituting the core phyllosphere microbiome in our assay show some degree of response to vegetative shade. Bacteria that increased in abundance on plants with a shade-avoidance phenotype corresponded to genera associated with beneficial traits such as enhanced disease resistance and growth promotion. Our findings suggests that plants manipulate their phyllosphere microbiome under shade conditions as a strategy to optimise fitness when competing for light. We discuss the implications of our findings in terms of furthering our understanding of plant-microbe signalling in the shaping of the phyllosphere microbiome and the possibility of manipulating the phyllosphere microbiome for plant health in an agricultural setting at high planting densities.
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Affiliation(s)
- James A O'Rourke
- Department of Biological Sciences, Royal Holloway University of London, Egham, UK
| | - Stacey A Vincent
- Department of Biological Sciences, Royal Holloway University of London, Egham, UK
| | - Isabel E I Williams
- Department of Biological Sciences, Royal Holloway University of London, Egham, UK
| | - Eleanor L Gascoyne
- Department of Biological Sciences, Royal Holloway University of London, Egham, UK
| | - Paul F Devlin
- Department of Biological Sciences, Royal Holloway University of London, Egham, UK.
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Han Y, Sun T, Tang Y, Yang M, Gao W, Wang L, Sui C. Root rot in medicinal plants: a review of extensive research progress. FRONTIERS IN PLANT SCIENCE 2025; 15:1504370. [PMID: 39963361 PMCID: PMC11830675 DOI: 10.3389/fpls.2024.1504370] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2024] [Accepted: 12/16/2024] [Indexed: 02/20/2025]
Abstract
Root rot is a general term for soil-borne diseases that cause the necrosis and decay of underground plant parts. It has a wide host range and occurs in various types of plants, including crops, horticultural crops and medicinal plants. Due to the fact that medicinal plants generally have a long growth cycle and are primarily the root and rhizome herbs. This results in root rot causing more serious damage in medicinal plant cultivation than in other plants. Infected medicinal plants have shrivel or yellowed leaves, rotting rhizomes, and even death of the entire plant, resulting in a sharp decline in yield or even total crop failure, but also seriously reduce the commercial specifications and effective ingredient content of medicinal plants. The pathogens of root rot are complex and diverse, and Fusarium fungi have been reported as the most widespread pathogen. With the expansion of medicinal plant cultivation, root rot has occurred frequently in many medicinal plants such as Araliaceae, Fabaceae, Ranunculaceae, and Solanaceae and other medicinal plants. This article reviews recent research progress on root rot in medicinal plants, covering various aspects such as disease characteristics, occurrence, pathogen species, damage to medicinal plants, disease mechanisms, control measures, and genetic factors. The aim is to provide reference for better control of root rot of medicinal plants.
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Affiliation(s)
- Yu Han
- Institute of Medicinal Plant Development (IMPLAD), Chinese Academy of Medical Sciences & Peking Union Medical College (Key Laboratory of Bioactive Substances and Resources Utilization of Chinese Herbal Medicine, Ministry of Education & National Engineering Laboratory for Breeding of Endangered Medicinal Materials), Beijing, China
- School of Pharmacy, Heilongjiang Jiamusi University, Jiamusi, China
| | - Tianqi Sun
- Institute of Medicinal Plant Development (IMPLAD), Chinese Academy of Medical Sciences & Peking Union Medical College (Key Laboratory of Bioactive Substances and Resources Utilization of Chinese Herbal Medicine, Ministry of Education & National Engineering Laboratory for Breeding of Endangered Medicinal Materials), Beijing, China
| | - Yuman Tang
- Institute of Medicinal Plant Development (IMPLAD), Chinese Academy of Medical Sciences & Peking Union Medical College (Key Laboratory of Bioactive Substances and Resources Utilization of Chinese Herbal Medicine, Ministry of Education & National Engineering Laboratory for Breeding of Endangered Medicinal Materials), Beijing, China
| | - Min Yang
- Institute of Medicinal Plant Development (IMPLAD), Chinese Academy of Medical Sciences & Peking Union Medical College (Key Laboratory of Bioactive Substances and Resources Utilization of Chinese Herbal Medicine, Ministry of Education & National Engineering Laboratory for Breeding of Endangered Medicinal Materials), Beijing, China
| | - Weiwei Gao
- Institute of Medicinal Plant Development (IMPLAD), Chinese Academy of Medical Sciences & Peking Union Medical College (Key Laboratory of Bioactive Substances and Resources Utilization of Chinese Herbal Medicine, Ministry of Education & National Engineering Laboratory for Breeding of Endangered Medicinal Materials), Beijing, China
| | - Lihong Wang
- School of Pharmacy, Heilongjiang Jiamusi University, Jiamusi, China
| | - Chun Sui
- Institute of Medicinal Plant Development (IMPLAD), Chinese Academy of Medical Sciences & Peking Union Medical College (Key Laboratory of Bioactive Substances and Resources Utilization of Chinese Herbal Medicine, Ministry of Education & National Engineering Laboratory for Breeding of Endangered Medicinal Materials), Beijing, China
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Muhammad M, Wahab A, Waheed A, Hakeem KR, Mohamed HI, Basit A, Toor MD, Liu YH, Li L, Li WJ. Navigating Climate Change: Exploring the Dynamics Between Plant-Soil Microbiomes and Their Impact on Plant Growth and Productivity. GLOBAL CHANGE BIOLOGY 2025; 31:e70057. [PMID: 39924996 DOI: 10.1111/gcb.70057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2024] [Revised: 11/23/2024] [Accepted: 01/06/2025] [Indexed: 02/11/2025]
Abstract
Understanding the intricate interplay between plant and soil microbiomes and their effects on plant growth and productivity is vital in a rapidly changing climate. This review explores the interconnected impacts of climate change on plant-soil microbiomes and their profound effects on agricultural productivity. The ongoing rise in global temperatures, shifting precipitation patterns and extreme weather events significantly affect the composition and function of microbial communities in the rhizosphere. Changes in microbial diversity and activity due to rising temperatures impact nutrient cycling, microbial enzyme synthesis, soil health and pest and disease management. These changes also influence the dynamics of soil microbe communities and their capability to promote plant health. As the climate changes, plants' adaptive capacity and microbial partners become increasingly crucial for sustaining agriculture. Mitigating the adverse effects of climate change on plant growth and agricultural productivity requires a comprehensive understanding of the interconnected mechanisms driving these processes. It highlights various strategies for mitigating and adapting to environmental challenges, including soil management, stress-tolerant crops, cover cropping, sustainable land and water management, crop rotation, organic amendments and the development of climate-resilient crop varieties. It emphasises the need for further exploration of plant-soil microbiomes within the broader context of climate change. Promising mitigation strategies, including precision agriculture and targeted microbiome modifications, offer valuable pathways for future research and practical implementation of global food security and climate change.
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Affiliation(s)
- Murad Muhammad
- State Key Laboratory of Desert and Oasis Ecology, Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, People's Republic of China
- University of Chinese Academy of Sciences, Beijing, People's Republic of China
- Xinjiang Key Laboratory of Biodiversity Conservation and Application in Arid Lands, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, People's Republic of China
| | - Abdul Wahab
- University of Chinese Academy of Sciences, Beijing, People's Republic of China
- Shanghai Center for Plant Stress Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, People's Republic of China
| | - Abdul Waheed
- State Key Laboratory of Desert and Oasis Ecology, Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, People's Republic of China
- Xinjiang Key Laboratory of Biodiversity Conservation and Application in Arid Lands, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, People's Republic of China
| | - Khalid Rehman Hakeem
- Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
- Princess Dr. Najla Bint Saud Al-Saud Center for Excellence Research in Biotechnology, King Abdulaziz University, Jeddah, Saudi Arabia
- Department of Public Health, Daffodil International University, Dhaka, Bangladesh
- University Centre for Research Development, Chandigarh University, Mohali, Punjab, India
| | - Heba Ibrahim Mohamed
- Biological and Geological Sciences Department, Faculty of Education, Ain Shams University, Cairo, Egypt
| | - Abdul Basit
- Department of Horticulture, Graduate School, Kyungpook National University, Daegu, South Korea
| | - Muhammad Danish Toor
- Institute of Ecology and Earth Sciences University of Tartu Estonia, Faculty of Science and Technology, Tartu, Estonia
| | - Yong-Hong Liu
- State Key Laboratory of Desert and Oasis Ecology, Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, People's Republic of China
- Xinjiang Key Laboratory of Biodiversity Conservation and Application in Arid Lands, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, People's Republic of China
| | - Li Li
- State Key Laboratory of Desert and Oasis Ecology, Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, People's Republic of China
- Xinjiang Key Laboratory of Biodiversity Conservation and Application in Arid Lands, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, People's Republic of China
| | - Wen-Jun Li
- State Key Laboratory of Desert and Oasis Ecology, Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, People's Republic of China
- Xinjiang Key Laboratory of Biodiversity Conservation and Application in Arid Lands, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, People's Republic of China
- State Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Stress Biology, School of Life Sciences, Sun Yat-Sen University, Guangzhou, People's Republic of China
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Zieschank V, Muola A, Janssen S, Lach A, Junker RR. Tolerance to land-use changes through natural modulations of the plant microbiome. THE ISME JOURNAL 2025; 19:wraf010. [PMID: 39836381 PMCID: PMC11833322 DOI: 10.1093/ismejo/wraf010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2024] [Revised: 12/26/2024] [Accepted: 01/20/2025] [Indexed: 01/22/2025]
Abstract
Land-use changes threaten ecosystems and are a major driver of species loss. Plants may adapt or migrate to resist global change, but this can lag behind rapid anthropogenic changes to the environment. Our data show that natural modulations of the microbiome of grassland plants in response to experimental land-use change in a common garden directly affect plant phenotype and performance, thus increasing plant tolerance. In contrast, direct effects of fertilizer application and mowing on plant phenotypes were less strong. Land-use intensity-specific microbiomes caused clearly distinguishable plant phenotypes also in a laboratory experiment using gnotobiotic strawberry plants in absence of environmental variation. Therefore, natural modulations of the plant microbiome may be key to species persistence and ecosystem stability. We argue that a prerequisite for this microbiome-mediated tolerance is the availability of diverse local sources of microorganisms facilitating rapid modulations in response to change. Thus, conservation efforts must protect microbial diversity, which can help mitigate the effects of global change and facilitate environmental and human health.
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Affiliation(s)
- Vincent Zieschank
- Evolutionary Ecology of Plants, Department of Biology, University of Marburg, Karl-von-Frisch-Str. 8, Marburg 35043, Germany
| | - Anne Muola
- Division of Biotechnology and Plant Health, Norwegian Institute of Bioeconomy Research, Holtvegen 66, Tromsø 9016, Norway
| | - Stefan Janssen
- Algorithmic Bioinformatics, Justus-Liebig-University Gießen, Ludwigsplatz 13-15, Gießen 35392, Germany
| | - Alexander Lach
- Evolutionary Ecology of Plants, Department of Biology, University of Marburg, Karl-von-Frisch-Str. 8, Marburg 35043, Germany
| | - Robert R Junker
- Evolutionary Ecology of Plants, Department of Biology, University of Marburg, Karl-von-Frisch-Str. 8, Marburg 35043, Germany
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Hao JR, Li Y, Ge Y. Harnessing the plant microbiome for environmental sustainability: From ecological foundations to novel applications. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 951:175766. [PMID: 39187075 DOI: 10.1016/j.scitotenv.2024.175766] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2024] [Revised: 08/21/2024] [Accepted: 08/22/2024] [Indexed: 08/28/2024]
Abstract
In plant environments, there exist heterogeneous microbial communities, referred to as the plant microbiota, which are recruited by plants and play crucial roles in promoting plant growth, aiding in resistance against pathogens and environmental stresses, thereby maintaining plant health. These microorganisms, along with their genomes, collectively form the plant microbiome. Research on the plant microbiome can help unravel the intricate interactions between plants and microbes, providing a theoretical foundation to reduce pesticide use, enhance agricultural productivity, and promote environmental sustainability. Despite significant progress in the field of research, unresolved challenges persist due to ongoing technological limitations and the complexities inherent in studying microorganisms at small scales. Recently, synthetic community (SynCom) has emerged as a novel technique for microbiome research, showing promising prospects for applications in the plant microbiome field. This article systematically introduces the origin and distribution of plant microbiota, the processes of their recruitment and colonization, and the mechanisms underlying their beneficial functions for plants, from the aspects of composition, assembly, and function. Furthermore, we discuss the principles, applications, challenges, and prospects of SynCom for promoting plant health.
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Affiliation(s)
- Jing-Ru Hao
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Yan Li
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Yuan Ge
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
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Zhang K, Han X, Fu Y, Khan Z, Zhang B, Bi J, Hu L, Luo L. Biochar coating promoted rice growth under drought stress through modulating photosynthetic apparatus, chloroplast ultrastructure, stomatal traits and ROS homeostasis. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 216:109145. [PMID: 39321623 DOI: 10.1016/j.plaphy.2024.109145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Revised: 09/18/2024] [Accepted: 09/21/2024] [Indexed: 09/27/2024]
Abstract
Drought hampers agricultural production by constraining crop growth and development. Nevertheless, there has been limited exploration regarding the effect of biochar coating in enhancing seed germination under drought conditions and understanding its underlying mechanisms. To fill this gap and clarify the pathway to drought resistance, the current research investigated the protective effectiveness of BC on seedling establishment and subsequent growth of rice under drought conditions. Results showed that BC notably elevated emergence rate (5.5%), shoot length (27.4%), root length (33.4%), plant height (19.6/10.3%), leaf area (69.8/71.7%), and plant biomass (85.7/67.9%) after 15/30 days under drought conditions compared to the control. Biochar coating facilitated the maintenance of a stable chloroplast structure, reduced chlorophyll degradation, and sustained cell expansion. This contributed to the improvement of stomatal characteristics on both adaxial and abaxial leaf surfaces during drought stress, encompassing enhancements in stomatal density and aperture. The preservation of stomatal opening led to an increased photosynthetic capacity, thereby fostering elevated photosynthetic activity and heightened plant biomass under stressful conditions. Simultaneously, BC treatment significantly diminished the production of reactive oxygen species, preserved cell membrane integrity, and augmented the accumulation of osmotic protectants. These outcomes signify that biochar coating mitigates the deleterious impacts of drought stress on photosynthesis, stomatal aperture, chloroplast ultrastructure, osmotic regulation, and redox homeostasis in plants through specific water and nutrient regulation. Consequently, this enhances the tolerance and growth of rice under drought stress.
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Affiliation(s)
- Kangkang Zhang
- Institute of Quality Safety and Standards of Agricultural Products Research, Jiangxi Academy of Agricultural Sciences, Nanchang, China; National Key Laboratory of Crop Genetic Improvement, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China; Key Laboratory of Grain Crop Genetic Resources Evaluation and Utilization, Ministry of Agriculture and Rural Affairs, Shanghai, China; Shanghai Agrobiological Gene Center, Shanghai, China
| | - Xiaomeng Han
- National Key Laboratory of Crop Genetic Improvement, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Yanfeng Fu
- National Key Laboratory of Crop Genetic Improvement, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China; Key Laboratory of Grain Crop Genetic Resources Evaluation and Utilization, Ministry of Agriculture and Rural Affairs, Shanghai, China; Shanghai Agrobiological Gene Center, Shanghai, China
| | - Zaid Khan
- College of Natural Resources and Environment, South China Agricultural University, Guangzhou, China
| | - Biaojin Zhang
- Institute of Quality Safety and Standards of Agricultural Products Research, Jiangxi Academy of Agricultural Sciences, Nanchang, China
| | - Junguo Bi
- Key Laboratory of Grain Crop Genetic Resources Evaluation and Utilization, Ministry of Agriculture and Rural Affairs, Shanghai, China; Shanghai Agrobiological Gene Center, Shanghai, China.
| | - Liyong Hu
- National Key Laboratory of Crop Genetic Improvement, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China.
| | - Lijun Luo
- National Key Laboratory of Crop Genetic Improvement, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China; Key Laboratory of Grain Crop Genetic Resources Evaluation and Utilization, Ministry of Agriculture and Rural Affairs, Shanghai, China; Shanghai Agrobiological Gene Center, Shanghai, China.
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Hou M, Leng C, Zhu J, Yang M, Yin Y, Xing Y, Chen J. Alpine and subalpine plant microbiome mediated plants adapt to the cold environment: A systematic review. ENVIRONMENTAL MICROBIOME 2024; 19:82. [PMID: 39487507 PMCID: PMC11529171 DOI: 10.1186/s40793-024-00614-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2024] [Accepted: 09/02/2024] [Indexed: 11/04/2024]
Abstract
With global climate change, ecosystems are affected, some of which are more vulnerable than others, such as alpine ecosystems. Microbes play an important role in environmental change in global ecosystems. Plants and microbes are tightly associated, and symbiotic or commensal microorganisms are crucial for plants to respond to stress, particularly for alpine plants. The current study of alpine and subalpine plant microbiome only stays at the community structure scale, but its ecological function and mechanism to help plants to adapt to the harsh environments have not received enough attention. Therefore, it is essential to systematically understand the structure, functions and mechanisms of the microbial community of alpine and subalpine plants, which will be helpful for the conservation of alpine and subalpine plants using synthetic microbial communities in the future. This review mainly summarizes the research progress of the alpine plant microbiome and its mediating mechanism of plant cold adaptation from the following three perspectives: (1) Microbiome community structure and their unique taxa of alpine and subalpine plants; (2) The role of alpine and subalpine plant microbiome in plant adaptation to cold stress; (3) Mechanisms by which the microbiome of alpine and subalpine plants promotes plant adaptation to low-temperature environments. Finally, we also discussed the future application of high-throughput technologies in the development of microbial communities for alpine and subalpine plants. The existing knowledge could improve our understanding of the important role of microbes in plant adaptation to harsh environments. In addition, perspective further studies on microbes' function confirmation and microbial manipulations in microbiome engineering were also discussed.
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Affiliation(s)
- Mengyan Hou
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No.151, Malianwa North Road, Haidian District, Beijing, 100193, People's Republic of China
| | - Chunyan Leng
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No.151, Malianwa North Road, Haidian District, Beijing, 100193, People's Republic of China
| | - Jun Zhu
- Xinjiang Institute of Chinese and Ethnic Medicine, Urumqi, 830002, People's Republic of China
| | - Mingshu Yang
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No.151, Malianwa North Road, Haidian District, Beijing, 100193, People's Republic of China
| | - Yifei Yin
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No.151, Malianwa North Road, Haidian District, Beijing, 100193, People's Republic of China
| | - Yongmei Xing
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No.151, Malianwa North Road, Haidian District, Beijing, 100193, People's Republic of China
| | - Juan Chen
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No.151, Malianwa North Road, Haidian District, Beijing, 100193, People's Republic of China.
- School of Pharmacy, Shandong Second Medical University, Weifang, 261053, People's Republic of China.
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Mishra S, Srivastava A, Singh A, Pandey GC, Srivastava G. An overview of symbiotic and pathogenic interactions at the fungi-plant interface under environmental constraints. FRONTIERS IN FUNGAL BIOLOGY 2024; 5:1363460. [PMID: 39524061 PMCID: PMC11544544 DOI: 10.3389/ffunb.2024.1363460] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Accepted: 08/22/2024] [Indexed: 11/16/2024]
Abstract
The complex and dynamic interactions between fungi and plants constitute a critical arena in ecological science. In this comprehensive review paper, we explore the multifaceted relationships at the fungi-plant interface, encompassing both mutualistic and antagonistic interactions, and the environmental factors influencing these associations. Mutualistic associations, notably mycorrhizal relationships, play a pivotal role in enhancing plant health and ecological balance. On the contrary, fungal diseases pose a significant threat to plant health, agriculture, and natural ecosystems, such as rusts, smuts, powdery mildews, downy mildews, and wilts, which can cause extensive damage and lead to substantial economic losses. Environmental constraints encompassing abiotic and biotic factors are elucidated to understand their role in shaping the fungi-plant interface. Temperature, moisture, and soil conditions, along with the presence of other microbes, herbivores, and competing plants, significantly influence the outcome of these interactions. The interplay between mutualism and antagonism is emphasised as a key determinant of ecosystem health and stability. The implications of these interactions extend to overall ecosystem productivity, agriculture, and conservation efforts. The potential applications of this knowledge in bioremediation, biotechnology, and biocontrol strategies emphasise the importance of adapting to climate change. However, challenges and future directions in this field include the impacts of climate change, emerging fungal pathogens, genomic insights, and the role of the fungi-plant interface in restoration ecology. Hence, this review paper provides a comprehensive overview of fungi-plant interactions, their environmental influences, and their applications in agriculture, conservation, and ecological restoration.
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Affiliation(s)
- Sunishtha Mishra
- Department of Bioscience and Biotechnology, Banasthali Vidyapith, Rajasthan, India
| | - Anukriti Srivastava
- Department of Bioscience and Biotechnology, Banasthali Vidyapith, Rajasthan, India
| | - Ajeet Singh
- Department of Botany, Government Adarsh Girls College Sheopur, Madhya Pradesh, India
| | | | - Garima Srivastava
- Department of Bioscience and Biotechnology, Banasthali Vidyapith, Rajasthan, India
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Larrouy JL, Ridgway HJ, Dhami MK, Jones EE. Improvement in Microbiota Recovery Using Cas-9 Digestion of Mānuka Plastid and Mitochondrial DNA. MICROBIAL ECOLOGY 2024; 87:124. [PMID: 39379709 PMCID: PMC11461681 DOI: 10.1007/s00248-024-02436-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2024] [Accepted: 09/19/2024] [Indexed: 10/10/2024]
Abstract
Understanding host-microbe interactions in planta is an expanding area of research. Amplicon sequencing of the 16S rRNA gene is a powerful and common method to study bacterial communities associated with plants. However, the co-amplification of mitochondrial and plastid 16S rRNA genes by universal primers impairs the sensitivity and performance of 16S rRNA sequencing. In 2020, a new method, Cas-16S-seq, was reported in the literature to remove host contamination for profiling the microbiota in rice, a well-studied domestic plant, by engineering RNA-programmable Cas9 nuclease in 16S rRNA sequencing. For the first time, we tested the efficiency and applicability of the Cas-16S-seq method on foliage, flowers, and seed of a non-domesticated wild plant for which there is limited genomic information, Leptospermum scoparium (mānuka). Our study demonstrated the efficiency of the Cas-16S-seq method for L. scoparium in removing host contamination in V4-16S amplicons. An increase of 46% in bacterial sequences was found using six guide RNAs (gRNAs), three gRNAs targeting the mitochondrial sequence, and three gRNAs targeting the chloroplast sequence of L. scoparium in the same reaction. An increase of 72% in bacterial sequences was obtained by targeting the mitochondrial and chloroplast sequences of L. scoparium in the same sample at two different steps of the library preparation (DNA and 1st step PCR). The number of OTUs (operational taxonomic units) retrieved from soil samples was consistent when using the different methods (Cas-16S-seq and 16S-seq) indicating that the Cas-16S-seq implemented for L. scoparium did not introduce bias to microbiota profiling. Our findings provide a valuable tool for future studies investigating the bacterial microbiota of L. scoparium in addition to evaluating an important tool in the plant microbiota research on other non-domesticated wild species.
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Affiliation(s)
- J L Larrouy
- Department of Pest-Management and Conservation, Faculty of Agriculture and Life Sciences, Lincoln University, Lincoln, Christchurch, 7647, New Zealand.
- The New Zealand Institute for Plant and Food Research Limited, Lincoln, 7608, New Zealand.
| | - H J Ridgway
- Department of Pest-Management and Conservation, Faculty of Agriculture and Life Sciences, Lincoln University, Lincoln, Christchurch, 7647, New Zealand
- The New Zealand Institute for Plant and Food Research Limited, Lincoln, 7608, New Zealand
| | - M K Dhami
- Biocontrol & Molecular Ecology, Manaaki Whenua Landcare Research, Lincoln, 7608, New Zealand
| | - E E Jones
- Department of Pest-Management and Conservation, Faculty of Agriculture and Life Sciences, Lincoln University, Lincoln, Christchurch, 7647, New Zealand
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11
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Naz M, Afzal MR, Qi SS, Dai Z, Sun Q, Du D. Microbial-assistance and chelation-support techniques promoting phytoremediation under abiotic stresses. CHEMOSPHERE 2024; 365:143397. [PMID: 39313079 DOI: 10.1016/j.chemosphere.2024.143397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2024] [Revised: 08/29/2024] [Accepted: 09/21/2024] [Indexed: 09/25/2024]
Abstract
Phytoremediation, the use of plants to remove heavy metals from polluted environments, has been extensively studied. However, abiotic stresses such as drought, salt, and high temperatures can limit plant growth and metal uptake, reducing phytoremediation efficiency. High levels of HMs are also toxic to plants, further decreasing phytoremediation efficacy. This manuscript explores the potential of microbial-assisted and chelation-supported approaches to improve phytoremediation under abiotic stress conditions. Microbial assistance involves the use of specific microbes, including fungi that can produce siderophores. Siderophores bind essential metal ions, increasing their solubility and bioavailability for plant uptake. Chelation-supported methods employ organic acids and amino acids to enhance soil absorption and supply of essential metal ions. These chelating agents bind HMs ions, reducing their toxicity to plants and enabling plants to better withstand abiotic stresses like drought and salinity. Managed microbial-assisted and chelation-supported approaches offer more efficient and sustainable phytoremediation by promoting plant growth, metal uptake, and mitigating the effects of heavy metal and abiotic stresses. Managed microbial-assisted and chelation-supported approaches offer more efficient and sustainable phytoremediation by promoting plant growth, metal uptake, and mitigating the effects of HMs and abiotic stresses.These strategies represent a significant advancement in phytoremediation technology, potentially expanding its applicability to more challenging environmental conditions. In this review, we examined how microbial-assisted and chelation-supported techniques can enhance phytoremediation a method that uses plants to remove heavy metals from contaminated sites. These approaches not only boost plant growth and metal uptake but also alleviate the toxic effects of HMs and abiotic stresses like drought and salinity. By doing so, they make phytoremediation a more viable and effective solution for environmental remediation.
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Affiliation(s)
- Misbah Naz
- School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, Jiangsu Province, PR China; Institute of Environment and Ecology, School of the Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, Jiangsu Province, PR China.
| | - Muhammad Rahil Afzal
- Institute of Environment and Ecology, School of the Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, Jiangsu Province, PR China.
| | - Shan Shan Qi
- Key Laboratory of Modern Agricultural Equipment and Technology, Ministry of Education, School of Agricultural Engineering Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, Jiangsu Province, PR China.
| | - Zhicong Dai
- School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, Jiangsu Province, PR China; Institute of Environment and Ecology, School of the Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, Jiangsu Province, PR China; Jiangsu Collaborative Innovation Center of Technology and Material of Water Treatment, Suzhou University of Science and Technology, 99 Xuefu Road, Suzhou, 215009, Jiangsu Province, PR China.
| | - Qiuyang Sun
- Institute of Environment and Ecology, School of the Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, Jiangsu Province, PR China.
| | - Daolin Du
- Jingjiang College, Jiangsu University, Zhenjiang, 212013, PR China.
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12
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Sheng X, Liu G. Investigating the impact of the internet on managing green financial innovation and improving agricultural conditions in water-scarce Asian regions using ANN modeling. Sci Rep 2024; 14:22365. [PMID: 39333558 PMCID: PMC11436779 DOI: 10.1038/s41598-024-72117-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2024] [Accepted: 09/03/2024] [Indexed: 09/29/2024] Open
Abstract
This research focuses on the importance of management strategies, green innovation, and sustainable practices in the agricultural sector. These factors are crucial for job creation, food security, and environmental conservation. Particularly in water-scarce regions, effective management is necessary to overcome natural resource constraints and encourage a shift towards digital agriculture (AGRI). The study aims to identify and analyze the challenges and issues related to agricultural research and technology in Asian countries. The collected data were analyzed using exploratory factor analysis in the SPSS software. The analysis revealed a range of issues and challenges for agricultural development, including those related to the structure and policy framework, the availability and quality of resources and infrastructures, and the provision of effective support services, all of which encompassed factors such as research and technology investment, research management, productivity, research culture, networking, and the integration of higher education and agricultural research. To estimate the efficiency of technology development, agricultural development, and support services for AGRI, an artificial neural network (ANN) was utilized. The ANN was trained by incorporating changes in management strategies, green innovation, and sustainability across a broader range of experimental scenarios. The evaluation of the ANN's predictions showed that improvements in management strategies and the adoption of green innovation and sustainability significantly impacted the productivity of technology development, agricultural development, and support services for AGRI. The accuracy of the ANN's predictions was further assessed using linear regression. The results indicated an acceptable level of error when compared to the target results obtained from experimental tests. Overall, this study emphasizes the importance of effective management, green innovation, and sustainable practices in driving advancements in technology and agricultural development.
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Affiliation(s)
- Xiaohan Sheng
- School of Social Sciences, Rice University, Houston, TX77005, USA
| | - Guangmin Liu
- Department of Accounting, School of Economics and Management, Harbin University, Harbin, 150086, China.
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13
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Glockow T, Kaster AK, Rabe KS, Niemeyer CM. Sustainable agriculture: leveraging microorganisms for a circular economy. Appl Microbiol Biotechnol 2024; 108:452. [PMID: 39212740 PMCID: PMC11364797 DOI: 10.1007/s00253-024-13294-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2024] [Revised: 08/20/2024] [Accepted: 08/21/2024] [Indexed: 09/04/2024]
Abstract
Microorganisms serve as linchpins in agricultural systems. Classic examples include microbial composting for nutrient recovery, using microorganisms in biogas technology for agricultural waste utilization, and employing biofilters to reduce emissions from stables or improve water quality in aquaculture. This mini-review highlights the importance of microbiome analysis in understanding microbial diversity, dynamics, and functions, fostering innovations for a more sustainable agriculture. In this regard, customized microorganisms for soil improvement, replacements for harmful agrochemicals or antibiotics in animal husbandry, and (probiotic) additives in animal nutrition are already in or even beyond the testing phase for a large-scale conventional agriculture. Additionally, as climate change reduces arable land, new strategies based on closed-loop systems and controlled environment agriculture, emphasizing microbial techniques, are being developed for regional food production. These strategies aim to secure the future food supply and pave the way for a sustainable, resilient, and circular agricultural economy. KEY POINTS: • Microbial strategies facilitate the integration of multiple trophic levels, essential for cycling carbon, nitrogen, phosphorus, and micronutrients. • Exploring microorganisms in integrated biological systems is essential for developing practical agricultural solutions. • Technological progress makes sustainable closed-entity re-circulation systems possible, securing resilient future food production.
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Affiliation(s)
- Till Glockow
- Acheron GmbH, Auf Der Muggenburg 30, 28217, Bremen, Germany
| | - Anne-Kristin Kaster
- Karlsruhe Institute of Technology (KIT), Institute for Biological Interfaces 5 (IBG-5), Biotechnology and Microbial Genetics, Hermann-Von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany
| | - Kersten S Rabe
- Karlsruhe Institute of Technology (KIT), Institute for Biological Interfaces 1 (IBG-1), Biomolecular Micro- and Nanostructures, Hermann-Von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany
| | - Christof M Niemeyer
- Karlsruhe Institute of Technology (KIT), Institute for Biological Interfaces 1 (IBG-1), Biomolecular Micro- and Nanostructures, Hermann-Von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany.
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14
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Lombardo MF, Zhang Y, Xu J, Trivedi P, Zhang P, Riera N, Li L, Wang Y, Liu X, Fan G, Tang J, Coletta-Filho HD, Cubero J, Deng X, Ancona V, Lu Z, Zhong B, Roper MC, Capote N, Catara V, Pietersen G, Al-Sadi AM, Xu X, Wang J, Yang H, Jin T, Cirvilleri G, Wang N. Global citrus root microbiota unravels assembly cues and core members. Front Microbiol 2024; 15:1405751. [PMID: 39132141 PMCID: PMC11310164 DOI: 10.3389/fmicb.2024.1405751] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2024] [Accepted: 07/09/2024] [Indexed: 08/13/2024] Open
Abstract
Introduction Citrus is one of the most important fruit crops worldwide, and the root-associated microbiota can have a profound impact on tree health and growth. Methods In a collaborative effort, the International Citrus Microbiome Consortium investigated the global citrus root microbiota with samples collected from nine citrus-producing countries across six continents. We analyzed 16S rDNA and ITS2 amplicon sequencing data to identify predominant prokaryotic and fungal taxa in citrus root samples. Comparative analyses were conducted between root-associated microbial communities and those from the corresponding rhizosphere and bulk soil samples. Additionally, genotype-based group-wise comparisons were performed to assess the impact of citrus genotype on root microbiota composition. Results Ten predominant prokaryotic phyla, containing nine bacterial phyla including Proteobacteria, Actinobacteria, Acidobacteria, and Bacteroidetes and one archaeal phylum (Thaumarchaeota), and multiple fungal phyla including Ascomycota and Basidiomycota were identified in the citrus root samples. Compared with the microbial communities from the corresponding rhizosphere and bulk soil samples from the same trees, the prokaryotic and fungal communities in the roots exhibited lower diversity and complexity but greater modularity compared to those in the rhizosphere. In total, 30 root-enriched and 150 root-depleted genera in bacterial community were identified, whereas 21 fungal genera were enriched, and 147 fungal genera were depleted in the root niche compared with the rhizosphere. The citrus genotype significantly affected the root prokaryotic and fungal communities. In addition, we have identified the core root prokaryotic genera comprising Acidibacter, Allorhizobium, Bradyrhizobium, Chitinophaga, Cupriavidus, Devosia, Dongia, Niastella, Pseudomonas, Sphingobium, Steroidobacter and Streptomyces, and the core fungal genera including Acrocalymma, Cladosporium, Fusarium, Gibberella, Mortierella, Neocosmospora and Volutella. The potential functions of these core genera of root microbiota were predicted. Conclusion Overall, this study provides new insights into the assembly of microbial communities and identifies core members of citrus root microbiota across a wide geographic range. The findings offer valuable information for manipulating root microbiota to enhance plant growth and health.
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Affiliation(s)
- Monia F. Lombardo
- Citrus Research and Education Center, Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences (IFAS), University of Florida, Lake Alfred, FL, United States
- Department of Agriculture, Food and Environment (Di3A), University of Catania, Catania, Italy
| | - Yunzeng Zhang
- Citrus Research and Education Center, Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences (IFAS), University of Florida, Lake Alfred, FL, United States
- College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, Jiangsu, China
| | - Jin Xu
- Citrus Research and Education Center, Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences (IFAS), University of Florida, Lake Alfred, FL, United States
| | - Pankaj Trivedi
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO, United States
| | | | - Nadia Riera
- Citrus Research and Education Center, Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences (IFAS), University of Florida, Lake Alfred, FL, United States
| | - Lei Li
- Citrus Research and Education Center, Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences (IFAS), University of Florida, Lake Alfred, FL, United States
| | - Yayu Wang
- BGI-Shenzhen, Shenzhen, Guangdong, China
| | - Xin Liu
- BGI-Shenzhen, Shenzhen, Guangdong, China
| | | | - Jiliang Tang
- The State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Life Science and Technology, Guangxi Key Laboratory for Sugarcane Biology, Guangxi University, Nanning, Guangxi, China
| | - Helvécio D. Coletta-Filho
- Instituto Agronômico, IAC Centro de Citricultura Sylvio Moreira, CCSM, Cordeirópolis, São Paulo, Brazil
| | - Jaime Cubero
- Department of Plant Protection, National Institute for Agricultural and Food Research and Technology (INIA-CSIC), Madrid, Spain
| | - Xiaoling Deng
- Department of Plant Pathology, South China Agricultural University, Guangzhou, China
| | - Veronica Ancona
- Texas A&M University-Kingsville Citrus Center, Weslaco, TX, United States
| | - Zhanjun Lu
- National Navel Orange Engineering Research Center, Gannan Normal University, Ganzhou, Jiangxi, China
| | - Balian Zhong
- National Navel Orange Engineering Research Center, Gannan Normal University, Ganzhou, Jiangxi, China
| | - M. Caroline Roper
- Department of Microbiology and Plant Pathology, University of California, Riverside, Riverside, CA, United States
| | | | - Vittoria Catara
- Department of Agriculture, Food and Environment (Di3A), University of Catania, Catania, Italy
| | - Gerhard Pietersen
- Department of Genetics, University of Stellenbosch, Stellenbosch, South Africa
| | | | - Xun Xu
- BGI-Shenzhen, Shenzhen, Guangdong, China
| | - Jian Wang
- BGI-Shenzhen, Shenzhen, Guangdong, China
| | | | - Tao Jin
- BGI-Shenzhen, Shenzhen, Guangdong, China
| | - Gabriella Cirvilleri
- Department of Agriculture, Food and Environment (Di3A), University of Catania, Catania, Italy
| | - Nian Wang
- Citrus Research and Education Center, Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences (IFAS), University of Florida, Lake Alfred, FL, United States
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Shelake RM, Wagh SG, Patil AM, Červený J, Waghunde RR, Kim JY. Heat Stress and Plant-Biotic Interactions: Advances and Perspectives. PLANTS (BASEL, SWITZERLAND) 2024; 13:2022. [PMID: 39124140 PMCID: PMC11313874 DOI: 10.3390/plants13152022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2024] [Revised: 07/11/2024] [Accepted: 07/22/2024] [Indexed: 08/12/2024]
Abstract
Climate change presents numerous challenges for agriculture, including frequent events of plant abiotic stresses such as elevated temperatures that lead to heat stress (HS). As the primary driving factor of climate change, HS threatens global food security and biodiversity. In recent years, HS events have negatively impacted plant physiology, reducing plant's ability to maintain disease resistance and resulting in lower crop yields. Plants must adapt their priorities toward defense mechanisms to tolerate stress in challenging environments. Furthermore, selective breeding and long-term domestication for higher yields have made crop varieties vulnerable to multiple stressors, making them more susceptible to frequent HS events. Studies on climate change predict that concurrent HS and biotic stresses will become more frequent and severe in the future, potentially occurring simultaneously or sequentially. While most studies have focused on singular stress effects on plant systems to examine how plants respond to specific stresses, the simultaneous occurrence of HS and biotic stresses pose a growing threat to agricultural productivity. Few studies have explored the interactions between HS and plant-biotic interactions. Here, we aim to shed light on the physiological and molecular effects of HS and biotic factor interactions (bacteria, fungi, oomycetes, nematodes, insect pests, pollinators, weedy species, and parasitic plants), as well as their combined impact on crop growth and yields. We also examine recent advances in designing and developing various strategies to address multi-stress scenarios related to HS and biotic factors.
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Affiliation(s)
- Rahul Mahadev Shelake
- Division of Applied Life Science (BK21 Four Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 52828, Republic of Korea
| | - Sopan Ganpatrao Wagh
- Global Change Research Institute, Czech Academy of Sciences, Brno 60300, Czech Republic;
| | - Akshay Milind Patil
- Cotton Improvement Project, Mahatma Phule Krishi Vidyapeeth (MPKV), Rahuri 413722, India;
| | - Jan Červený
- Global Change Research Institute, Czech Academy of Sciences, Brno 60300, Czech Republic;
| | - Rajesh Ramdas Waghunde
- Department of Plant Pathology, College of Agriculture, Navsari Agricultural University, Bharuch 392012, India;
| | - Jae-Yean Kim
- Division of Applied Life Science (BK21 Four Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 52828, Republic of Korea
- Division of Life Science, Gyeongsang National University, Jinju 52828, Republic of Korea
- Nulla Bio Inc., Jinju 52828, Republic of Korea
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Aqueel R, Badar A, Ijaz UZ, Malik KA. Microbial influencers and cotton leaf curl disease (CLCuD) susceptibility: a network perspective. Front Microbiol 2024; 15:1381883. [PMID: 38952448 PMCID: PMC11215052 DOI: 10.3389/fmicb.2024.1381883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2024] [Accepted: 05/21/2024] [Indexed: 07/03/2024] Open
Abstract
Biotic stresses, such as plant viruses, e.g., cotton leaf curl virus (CLCuV), can alter root-associated and leaf-associated microbial diversities in plants. There are complex ecological dynamics at play, with each microbe contributing to a multitude of biotic and abiotic interactions, thus deciding the stability of the plant's ecosystem in response to the disease. Deciphering these networks of interactions is a challenging task. The inferential research in microbiome is also at a nascent stage, often constrained by the underlying analytical assumptions and the limitations with respect to the depth of sequencing. There is also no real consensus on network-wide statistics to identify the influential microbial players in a network. Guided by the latest developments in network science, including recently published metrics such as Integrated View of Influence (IVI) and some other centrality measures, this study provides an exposé of the most influential nodes in the rhizospheric and phyllospheric microbial networks of the cotton leaf curl disease (CLCuD) susceptible, partially tolerant, and resistant cotton varieties. It is evident from our results that the CLCuD-resistant Gossypium arboreum possesses an equal share of keystone species, which helps it to withstand ecological pressures. In the resistant variety, the phyllosphere harbors the most influential nodes, whereas in the susceptible variety, they are present in the rhizosphere. Based on hubness score, spreading score, and IVI, the top 10 occurring keystone species in the FDH-228 (resistant) variety include Actinokineospora, Cohnella, Thermobacillus, Clostridium, Desulfofarcimen, and MDD-D21. Elusimicrobia, Clostridium-sensu-stricto_12, Candidatus woesebacteria, and Dyella were identified as the most influential nodes in the PFV-1 (partially tolerant) variety. In the PFV-2 (susceptible) variety, the keystone species were identified as Georginia, Nesterenkonia, Elusimicrobia MVP-88, Acetivibrio, Tepedisphaerales, Chelatococcus, Nitrosospira, and RCP2-54. This concept deciphers the diseased and healthy plant's response to viral disease, which may be microbially mediated.
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Affiliation(s)
- Rhea Aqueel
- Kauser Abdulla Malik School of Life Sciences, Forman Christian College (A Chartered University), Lahore, Pakistan
- Water and Environment Research Group, Mazumdar-Shaw Advanced Research Centre, University of Glasgow, Glasgow, United Kingdom
| | - Ayesha Badar
- Kauser Abdulla Malik School of Life Sciences, Forman Christian College (A Chartered University), Lahore, Pakistan
| | - Umer Zeeshan Ijaz
- Water and Environment Research Group, Mazumdar-Shaw Advanced Research Centre, University of Glasgow, Glasgow, United Kingdom
- National University of Ireland, University Road, Galway, Ireland
- Department of Molecular and Clinical Cancer Medicine, University of Liverpool, Liverpool, United Kingdom
| | - Kauser Abdulla Malik
- Kauser Abdulla Malik School of Life Sciences, Forman Christian College (A Chartered University), Lahore, Pakistan
- Pakistan Academy of Sciences, Islamabad, Pakistan
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Pérez‐Lorente AI, Romero D, Molina‐Santiago C. Unravelling the impact of environmental factors in shaping plant microbiomes. Microb Biotechnol 2024; 17:e14504. [PMID: 38850271 PMCID: PMC11162101 DOI: 10.1111/1751-7915.14504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2024] [Revised: 05/15/2024] [Accepted: 05/22/2024] [Indexed: 06/10/2024] Open
Abstract
This article emphasizes the significant role of environmental factors in shaping the plant microbiome, highlighting how bacterial and fungal communities influence plant responses to water stress, and how environmental factors shape fungal communities in crops. Furthermore, recent studies describe how different genotypes and levels of water stress affect the composition of bacterial communities associated with quinoa plants, as well as the relationship between environmental factors and the structure of fungal communities in apple fruit. These findings underscore the importance of understanding plant microbiome dynamics in developing effective crop protection strategies and improving agricultural sustainability with the objective of advance towards a microbiome-based strategy which allows us to improve crop tolerance to abiotic stresses.
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Affiliation(s)
- Alicia Isabel Pérez‐Lorente
- Departamento de Microbiología, Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora”, Universidad de Málaga – Consejo Superior de Investigaciones Científicas (IHSM‐UMA‐CSIC)Universidad de MálagaMalagaSpain
| | - Diego Romero
- Departamento de Microbiología, Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora”, Universidad de Málaga – Consejo Superior de Investigaciones Científicas (IHSM‐UMA‐CSIC)Universidad de MálagaMalagaSpain
| | - Carlos Molina‐Santiago
- Departamento de Microbiología, Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora”, Universidad de Málaga – Consejo Superior de Investigaciones Científicas (IHSM‐UMA‐CSIC)Universidad de MálagaMalagaSpain
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Afridi MS, Schulman P, Lacerda VNC, Guimaraes RA, Vasconcelos de Medeiros FH. Long-term benefit contribution of chemical and biological nematicide in coffee nematode management in soil microbial diversity and crop yield perspectives. Microbiol Res 2024; 282:127638. [PMID: 38422858 DOI: 10.1016/j.micres.2024.127638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2023] [Revised: 01/04/2024] [Accepted: 02/05/2024] [Indexed: 03/02/2024]
Abstract
The plant-parasitic root-knot nematode Meloidogyne exigua causes significant damage and is an important threat in Coffea arabica plantations. The utilization of plant-beneficial microbes as biological control agents against sedentary endoparasitic nematodes has been a longstanding strategy. However, their application in field conditions to control root-knot nematodes and their interaction with the rhizospheric microbiota of coffee plants remain largely unexplored. This study aimed to investigate the effects of biological control agent-based bioproducts and a chemical nematicide, used in various combinations, on the control of root-knot nematodes and the profiling of the coffee plant rhizomicrobiome in a field trial. The commercially available biological products, including Trichoderma asperellum URM 5911 (Quality), Bacillus subtilis UFPEDA 764 (Rizos), Bacillus methylotrophicus UFPEDA 20 (Onix), and nematicide Cadusafos (Rugby), were applied to adult coffee plants. The population of second-stage juveniles (J2) and eggs, as well as plant yield, were evaluated over three consecutive years. However, no significant differences were observed between the control group and the groups treated with bioproducts and the nematicide. Furthermore, the diversity and community composition of bacteria, fungi, and eukaryotes in the rhizosphere soil of bioproduct-treated plants were evaluated. The dominant phyla identified in the 16 S, ITS2, and 18 S communities included Proteobacteria, Acidobacteria, Actinobacteria, Ascomycota, Mortierellomycota, and Cercozoa in both consecutive years. There were no significant differences detected in the Shannon diversity of 16 S, ITS2, and 18 S communities between the years of data. The application of a combination of T. asperellum, B. subtilis, and B. methylotrophicus, as well as the use of Cadusafos alone and in combination with T. asperellum, B. subtilis, and B. methylotrophicus, resulted in a significant reduction (26.08%, 39.13%, and 21.73%, respectively) in the relative abundance of Fusarium spp. Moreover, the relative abundance of Trichoderma spp. significantly increased by 500%, 200%, and 100% at the genus level, respectively, compared to the control treatment. By constructing a co-occurrence network, we discovered a complex network structure among the species in all the bioproduct-treated groups. However, our findings indicate that the introduction of exogenous beneficial microbes into field conditions was unable to modulate the existing microbiota significantly. These findings suggest that the applied bioproducts had no significant impact on the reshaping of the overall microbial diversity in the rhizosphere microbiome but rather recruited selected microrganisms and assured net return to the grower. The results underscore the intricate nature of the rhizosphere microbiome and suggest the necessity for alternate biocontrol strategies and a re-evaluation of agricultural practices to improve nematode control by aligning with the complex ecological interactions in the rhizosphere.
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Affiliation(s)
- Muhammad Siddique Afridi
- Department of Phytopathology, Federal University of Lavras, PO Box 3037, Lavras, MG 37200-900, Brazil
| | - Pablo Schulman
- Embrapa Rice and Beans, Rodovia GO-462, PO Box 179, Santo Antônio de Goiás, GO 75375-000, Brazil
| | | | - Rafaela Araújo Guimaraes
- Department of Phytopathology, Federal University of Lavras, PO Box 3037, Lavras, MG 37200-900, Brazil
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Masenya K, Manganyi MC, Dikobe TB. Exploring Cereal Metagenomics: Unravelling Microbial Communities for Improved Food Security. Microorganisms 2024; 12:510. [PMID: 38543562 PMCID: PMC10974370 DOI: 10.3390/microorganisms12030510] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 02/21/2024] [Accepted: 02/28/2024] [Indexed: 11/12/2024] Open
Abstract
Food security is an urgent global challenge, with cereals playing a crucial role in meeting the nutritional requirements of populations worldwide. In recent years, the field of metagenomics has emerged as a powerful tool for studying the microbial communities associated with cereal crops and their impact on plant health and growth. This chapter aims to provide a comprehensive overview of cereal metagenomics and its role in enhancing food security through the exploration of beneficial and pathogenic microbial interactions. Furthermore, we will examine how the integration of metagenomics with other tools can effectively address the adverse effects on food security. For this purpose, we discuss the integration of metagenomic data and machine learning in providing novel insights into the dynamic interactions shaping plant-microbe relationships. We also shed light on the potential applications of leveraging microbial diversity and epigenetic modifications in improving crop resilience and yield sustainability. Ultimately, cereal metagenomics has revolutionized the field of food security by harnessing the potential of beneficial interactions between cereals and their microbiota, paving the way for sustainable agricultural practices.
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Affiliation(s)
- Kedibone Masenya
- National Zoological Gardens, South African National Biodiversity Institute, 32 Boom St., Pretoria 0001, South Africa
| | - Madira Coutlyne Manganyi
- Department of Biological and Environmental Sciences, Sefako Makgatho Health Sciences University, P.O. Box 139, Pretoria 0204, South Africa;
| | - Tshegofatso Bridget Dikobe
- Department of Botany, School of Biological Sciences, North-West University, Private Bag X2046, Mmabatho 2735, South Africa;
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20
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Amin F, Al-Huqail AA, Ullah S, Khan MN, Kaplan A, Ali B, Iqbal M, Elsaid FG, Ercisli S, Malik T, Al-Robai SA, Abeed AHA. Mitigation effect of alpha-tocopherol and thermo-priming in Brassica napus L. under induced mercuric chloride stress. BMC PLANT BIOLOGY 2024; 24:108. [PMID: 38347449 PMCID: PMC10863246 DOI: 10.1186/s12870-024-04767-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2023] [Accepted: 01/24/2024] [Indexed: 02/15/2024]
Abstract
Soil pollution with heavy metals has grown to be a big hassle, leading to the loss in farming production particularly in developing countries like Pakistan, where no proper channel is present for irrigation and extraction of these toxic heavy metals. The present study aims to ameliorate the damages caused by heavy metal ions (Hg-Mercury) on rapeseed (Brassica napus L.) via a growth regulator (α-tocopherol 150 mg/L) and thermopriming technique at 4 °C and 50 °C to maintain plant agronomical and physiological characteristics. In pot experiments, we designed total of 11 treatments viz.( T0 (control), T1 (Hg4ppm), T2 (Hg8ppm), T3 (Hg4ppm + 4 °C), T4 (Hg4ppm + 4 °C + tocopherol (150 m/L)), T5 (Hg4ppm + 50 °C), T6 (Hg4ppm + 50 °C + tocopherol (150 mg/L)), T7 (Hg8ppm + 4 °C), T8 (Hg8ppm + 4 °C + tocopherol (150 mg/L)), T9 (Hg8ppm + 50 °C), T10 (Hg8ppm + 50 °C + tocopherol (150 mg/L) the results revealed that chlorophyll content at p < 0.05 with growth regulator and antioxidant enzymes such as catalase, peroxidase, and malondialdehyde enhanced up to the maximum level at T5 = Hg4ppm + 50 °C (50 °C thermopriming under 4 ppm mercuric chloride stress), suggesting that high temperature initiate the antioxidant system to reduce photosystem damage. However, protein, proline, superoxide dismutase at p < 0.05, and carotenoid, soluble sugar, and ascorbate peroxidase were increased non-significantly (p > 0.05) 50 °C thermopriming under 8 ppm high mercuric chloride stress (T9 = Hg8ppm + 50 °C) representing the tolerance of selected specie by synthesizing osmolytes to resist oxidation mechanism. Furthermore, reduction in % MC (moisture content) is easily improved with foliar application of α-tocopherol and 50 °C thermopriming and 4 ppm heavy metal stress at T6 = Hg4ppm + 50 °C + α-tocopherol (150 mg/L), with a remarkable increase in plant vigor and germination energy. It has resulted that the inhibitory effect of only lower concentration (4 ppm) of heavy metal stress was ameliorated by exogenous application of α-tocopherol and thermopriming technique by synthesizing high levels of proline and antioxidant activities in maintaining seedling growth and development on heavy metal contaminated soil.
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Affiliation(s)
- Fazal Amin
- Department of Botany, University of Peshawar, Peshawar, 25120, Pakistan
| | - Arwa Abdulkreem Al-Huqail
- Department of Biology, College of Science, Princess Nourah bint Abdulrahman University, P.O. Box 84428, Riyadh, 11671, Saudi Arabia
| | - Sami Ullah
- Department of Botany, University of Peshawar, Peshawar, 25120, Pakistan.
| | - Muhammad Nauman Khan
- Department of Botany, Islamia College, Peshawar, 25120, Pakistan
- Biology Laboratory, University Public School, University of Peshawar, Peshawar, 25120, Pakistan
| | - Alevcan Kaplan
- Department of Crop and Animal Production, Sason Vocational School, Batman University, Batman, 72060, Turkey
| | - Baber Ali
- Department of Plant Sciences, Quaid-I-Azam University, Islamabad, 45320, Pakistan.
| | - Majid Iqbal
- Institute of Geographic Sciences and Natural Resources Research, University of Chinese Academy of Sciences, Beijing, 100040, China
| | - Fahmy Gad Elsaid
- Biology Department, College of Science, King Khalid University, 61421, Abha, Al-Faraa, Asir, Saudi Arabia
| | - Sezai Ercisli
- Department of Horticulture, Agricultural Faculty, Ataturk University, Erzurum, 25240, Turkey
| | - Tabarak Malik
- Department of Biomedical Sciences, Institute of Health, Jimma University, 378, Jimma, Ethiopia.
| | - Sami Asir Al-Robai
- Department of Biology, Faculty of Science, Al-Baha University, 1988, Al-Baha, Saudi Arabia
| | - Amany H A Abeed
- Department of Botany and Microbiology, Faculty of Science, Assiut University, Assiut, 71516, Egypt
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21
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Muneer MA, Chen X, Wang H, Munir MZ, Afridi MS, Yan X, Ji B, Li W, Wu L, Zheng C. Unraveling two decades of phyllosphere endophytes: tracing research trends and insights through visualized knowledge maps, with emphasis on microbial interactions as emerging frontiers. STRESS BIOLOGY 2024; 4:12. [PMID: 38319560 PMCID: PMC10847081 DOI: 10.1007/s44154-024-00148-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2023] [Accepted: 01/07/2024] [Indexed: 02/07/2024]
Abstract
Phyllosphere endophytes play a critical role in a myriad of biological functions, such as maintaining plant health and overall fitness. They play a determinative role in crop yield and quality by regulating vital processes, such as leaf functionality and longevity, seed mass, apical growth, flowering, and fruit development. This study conducted a comprehensive bibliometric analysis aiming to review the prevailing research trajectories in phyllosphere endophytes and harness both primary areas of interest and emerging challenges. A total of 156 research articles on phyllosphere endophytes, published between 2002 and 2022, were retrieved from the Web of Science Core Collection (WoSCC). A systematic analysis was conducted using CiteSpace to visualize the evolution of publication frequency, the collaboration network, the co-citation network, and keywords co-occurrence. The findings indicated that initially, there were few publications on the topic of phyllosphere endophytes. However, from 2011 onwards, there was a notable increase in the number of publications on phyllosphere endophytes, gaining worldwide attention. Among authors, Arnold, A Elizabeth is widely recognized as a leading author in this research area. In terms of countries, the USA and China hold the highest rankings. As for institutional ranking, the University of Arizona is the most prevalent and leading institute in this particular subject. Collaborative efforts among the authors and institutions tend to be confined to small groups, and a large-scale collaborative network needs to be established. This study identified the influential journals, literature, and hot research topics. These findings also highlight the interconnected nature of key themes, e.g., phyllosphere endophyte research revolves around the four pillars: diversity, fungal endophytes, growth, and endophytic fungi. This study provides an in-depth perspective on phyllosphere endophytes studies, revealing the identification of biodiversity and microbial interaction of phyllosphere endophytes as the principal research frontiers. These analytical findings not only elucidate the recent trajectory of phyllosphere endophyte research but also provide invaluable insights for similar studies and their potential applications on a global scale.
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Affiliation(s)
- Muhammad Atif Muneer
- International Magnesium Institute, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Xiaohui Chen
- Anhui Province Key Lab of Farmland Ecological Conservation and Pollution Prevention; Anhui Province Engineering and Technology Research Center of Intelligent Manufacture and Efficient Utilization of Green Phosphorus Fertilizer, College of Resources and Environment, Anhui Agricultural University, Hefei, 230036, China
| | - Hexin Wang
- Anhui Province Key Lab of Farmland Ecological Conservation and Pollution Prevention; Anhui Province Engineering and Technology Research Center of Intelligent Manufacture and Efficient Utilization of Green Phosphorus Fertilizer, College of Resources and Environment, Anhui Agricultural University, Hefei, 230036, China
| | - Muhammad Zeeshan Munir
- School of Environment and Energy, Peking University Shenzhen Graduate School, 2199, Lishui Rd, Shenzhen, 518055, China
| | - Muhammad Siddique Afridi
- Department of Plant Pathology, Federal University of Lavras (UFLA), Lavras, MG, CEP 37200-900, Brazil
| | - Xiaojun Yan
- International Magnesium Institute, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Baoming Ji
- College of Grassland Science, Beijing Forestry University, Beijing, China
| | - Wenqing Li
- Fujian Institute of Tobacco Sciences, Fuzhou, 350013, China
| | - Liangquan Wu
- International Magnesium Institute, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Chaoyuan Zheng
- International Magnesium Institute, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
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22
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Afridi MS, Kumar A, Javed MA, Dubey A, de Medeiros FHV, Santoyo G. Harnessing root exudates for plant microbiome engineering and stress resistance in plants. Microbiol Res 2024; 279:127564. [PMID: 38071833 DOI: 10.1016/j.micres.2023.127564] [Citation(s) in RCA: 17] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 11/02/2023] [Accepted: 11/27/2023] [Indexed: 12/23/2023]
Abstract
A wide range of abiotic and biotic stresses adversely affect plant's growth and production. Under stress, one of the main responses of plants is the modulation of exudates excreted in the rhizosphere, which consequently leads to alterations in the resident microbiota. Thus, the exudates discharged into the rhizospheric environment play a preponderant role in the association and formation of plant-microbe interactions. In this review, we aimed to provide a synthesis of the latest and most pertinent literature on the diverse biochemical and structural compositions of plant root exudates. Also, this work investigates into their multifaceted role in microbial nutrition and intricate signaling processes within the rhizosphere, which includes quorum-sensing molecules. Specifically, it explores the contributions of low molecular weight compounds, such as carbohydrates, phenolics, organic acids, amino acids, and secondary metabolites, as well as the significance of high molecular weight compounds, including proteins and polysaccharides. It also discusses the state-of-the-art omics strategies that unveil the vital role of root exudates in plant-microbiome interactions, including defense against pathogens like nematodes and fungi. We propose multiple challenges and perspectives, including exploiting plant root exudates for host-mediated microbiome engineering. In this discourse, root exudates and their derived interactions with the rhizospheric microbiota should receive greater attention due to their positive influence on plant health and stress mitigation.
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Affiliation(s)
- Muhammad Siddique Afridi
- Department of Plant Pathology, Federal University of Lavras, CP3037, 37200-900 Lavras, MG, Brazil.
| | - Ashwani Kumar
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar 470003, MP, India
| | - Muhammad Ammar Javed
- Institute of Industrial Biotechnology, Government College University, Lahore 54000, Pakistan
| | - Anamika Dubey
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar 470003, MP, India
| | | | - Gustavo Santoyo
- Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo, 58030 Morelia, Mexico.
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23
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Bibi S, Ullah S, Hafeez A, Khan MN, Javed MA, Ali B, Din IU, Bangash SAK, Wahab S, Wahid N, Zaman F, Alhag SK, El-Rahim IHAA, Ahmed AE, Selim S. Exogenous Ca/Mg quotient reduces the inhibitory effects of PEG induced osmotic stress on Avena sativa L. BRAZ J BIOL 2024; 84:e264642. [DOI: 10.1590/1519-6984.264642] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Accepted: 07/28/2022] [Indexed: 12/18/2022] Open
Abstract
Abstract Drought is one of the most damaging abiotic stress that hinder plant growth and development. The present study aimed to determine the effects of various Ca/Mg quotients under polyethylene glycol (PEG)–induced osmotic stress on growth, uptake and translocation of Ca and Mg in Avena sativa (L). Plants were grown in nutrient solution supplemented with three different Ca/Mg molar quotients (0.18, 2, and 4). After 30 days plants were exposed to two different PEG (Polyethylene glycol) concentrations (0.6 MPa & 0.2 MPa) for 8 days, and solutions were renewed after 4 days. A solution containing Ca and Mg nutrients has mitigated the negative impact caused via osmotic stress on relative growth rate (RGR), absolute growth rate (AGR), crop growth rate (CGR), leaf area ratio (LAR), Leaf index ratio (LAI), root-shoot ratio (RSR), water use efficiency (WUE) and net assimilation rate (NAR). In addition, it adversely affected germination parameters, including final emergence percentage (FEP), mean germination time (MGT), Timson germination Index (TGI), germination rate index (GRI) and percent field capacity (%FC), of oat (Avena sativa L.). Mg and Ca in shoot and root and Ca translocation factor decreased with increasing Ca in solution, while Mg translocation factor increased with increasing Ca in nutrient solution. In this work, the combined effects of various Ca/Mg quotients and osmotic stress produced by polyethylene glycol (PEG) in different concentrations (0.6 MPa, 0.2 MPa) on the growth and element uptake of Avena sativa L. are examined. As a result, the Ca/Mg Quotient may naturally combat the moderate drought stress experienced by field crops.
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Affiliation(s)
- S. Bibi
- University of Peshawar, Pakistan
| | - S. Ullah
- University of Peshawar, Pakistan
| | | | - M. N. Khan
- Agriculture University Public School and College, Pakistan; Islamia College Peshawar, Pakistan
| | - M. A. Javed
- Institute of Industrial Biotechnology, Pakistan
| | - B. Ali
- Quaid-i-Azam University, Pakistan
| | - I. U. Din
- Institute of Biotechnology and Genetic Engineering, Pakistan
| | | | - S. Wahab
- Quaid-i-Azam University, Pakistan
| | - N. Wahid
- Quaid-i-Azam University, Pakistan
| | - F. Zaman
- Islamia College Peshawar, Pakistan
| | - S. K. Alhag
- King Khalid University, Saudi Arabia; Ibb University, Yemen
| | | | - A. E. Ahmed
- King Khalid University, Saudi Arabia; South Valley University, Egypt
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24
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Naz R, Khan MS, Hafeez A, Fazil M, Khan MN, Ali B, Javed MA, Imran M, Shati AA, Alfaifi MY, Elbehairi SEI, Ahmed AE. Assessment of phytoremediation potential of native plant species naturally growing in a heavy metal-polluted industrial soils. BRAZ J BIOL 2024; 84:e264473. [DOI: 10.1590/1519-6984.264473] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2022] [Accepted: 08/25/2022] [Indexed: 12/18/2022] Open
Abstract
Abstract The present study was carried out in Hayat Abad Industrial Estate located in Peshawar to assess the levels of cadmium (Cd) that were present in the soil as well as the plant parts (Roots and shoots). To evaluate the phytoremediation potential of the plants different factors i.e. Bioconcentration Factor (BCF), Translocation Factor (TF), and Bioaccumulation Coefficient were determined. These plants were grown in their native habitats (BAC). We have analysed, cadmium concentration from soil which are collected from 50 different locations ranged from 11.54 mg/Kg (the lowest) to 89.80 mg/Kg (highest). The maximum concentration (89.80 mg/Kg) of cadmium was found in HIE-ST-16L Marble City and HIE-ST-7 Bryon Pharma (88.51 mg/Kg) while its minimum concentration (12.47 mg/Kg) were detected in the soil of Site (HIE-ST-14L Royal PVC Pipe) and (11.54 mg/Kg) at the site (HIE-ST-11 Aries Pharma). Most plant species showed huge potential for plant based approaches like phyto-extraction and phytoremediation. They also showed the potential for phyto-stabilization as well. Based on the concentration of cadmium the most efficient plants for phytoextraction were Cnicus benedictus, Parthenium hysterophorus, Verbesina encelioides, Conyza canadensis, Xanthium strumarium, Chenopodium album, Amaranthus viridis, Chenopodiastrum murale, Prosopis juliflora, Convolvulus arvensis, Stellaria media, Arenaria serpyllifolia, Cerastium dichotomum, Chrozophora tinctoria, Mirabilis jalapa, Medicago polymorpha, Lathyrus aphaca, Dalbergia sissoo, Melilotus indicus and Anagallis arvensis. The cadmium heavy metals in the examined soil were effectively removed by these plant species. Cerastium dichotomum, and Chenopodium murale were reported to be effective in phyto-stabilizing Cd based on concentrations of selected metals in roots and BCFs, TFs, and BACs values.
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Affiliation(s)
- R. Naz
- Islamia College, Pakistan
| | | | | | | | - M. N. Khan
- Islamia College, Pakistan; The University of Agriculture, Pakistan
| | - B. Ali
- Quaid-i-Azam University, Pakistan
| | | | | | | | | | - S. E. I. Elbehairi
- King Khalid University, Saudi Arabia; Egyptian Organization for Biological Products and Vaccines – VACSERA Holding Company, Egypt
| | - A. E. Ahmed
- King Khalid University, Saudi Arabia; South Valley University, Egypt
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25
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Al-Huqail AA, Saleem MH, Ali B, Azeem M, Mumtaz S, Yasin G, Marc RA, Ali S. Efficacy of priming wheat ( Triticum aestivum) seeds with a benzothiazine derivative to improve drought stress tolerance. FUNCTIONAL PLANT BIOLOGY : FPB 2023; 50:915-931. [PMID: 36803683 DOI: 10.1071/fp22140] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Accepted: 01/26/2023] [Indexed: 06/18/2023]
Abstract
We evaluated the effects of different concentrations (0.05 and 0.15mM) of a benzothiazine (BTh) derivative on wheat (Triticum aestivum L.) in normal (100% field water capacity, FWC) and drought (60% FWC) conditions. Various morphological and physiological characteristics, and the uptake of osmo-protectants and nutrients were measured under the two FWC conditions. Results show that the drought conditions significantly reduced plant growth, affected plant composition, reduced the concentrations of photosynthetic pigments and affected gaseous exchange attributes, stomatal behaviour, and uptake fluxes of essential nutrients, while increasing the contents of different osmo-protectants and enzymatic and non-enzymatic antioxidants to decrease the production of reactive oxygen species (ROS) within the cells/tissues. However, seed priming with BTh reduced water stress conditions by increasing plant growth and biomass, photosynthetic pigments, stomatal behaviour, different gaseous exchange attributes, and uptake fluxes of essential nutrients compared with unprimed plants. In addition, the plant has a strong antioxidant defense system, which further increased its activities under BTh derivative treatments, to scavenge ROS production and maintain cell turgor under water stress conditions. In conclusion, drought stress-induced oxidative stress and altered the growth of T. aestivum , whereas seed priming increased plant growth and antioxidant production by improving the plant tolerance to drought. We suggest that seed priming with a BTh derivative as an effective priming technique in T. aestivum for reducing drought stress tends to benefit a grower in terms of better growth to fulfil the market demand for food cereals.
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Affiliation(s)
- Arwa Abdulkreem Al-Huqail
- Department of Biology, College of Science, Princess Nourah bint Abdulrahman University, P.O. Box 84428, Riyadh 11671, Saudi Arabia
| | | | - Baber Ali
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Muhammad Azeem
- Department of Biology, College of Science, University of Bahrain, Bahrain
| | - Sahar Mumtaz
- Department of Botany, Division of Science and Technology, University of Education, Lahore 54770, Pakistan
| | - Ghulam Yasin
- Department of Botany, Bahauddin Zakariya University, Multan 60800, Pakistan
| | - Romina Alina Marc
- Food Engineering Department, Faculty of Food Science and Technology, University of Agricultural Science and Veterinary Medicine Cluj-Napoca, 3-5 Calea Mana stur Street, Cluj-Napoca 400372, Romania
| | - Shafaqat Ali
- Department of Environmental Sciences and Engineering, Government College University, Allama Iqbal Road, Faisalabad 38000, Pakistan; and Department of Biological Sciences and Technology, China Medical University, Taichung City 40402, Taiwan
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Haq IU, Ullah S, Amin F, Nafees M, Shah W, Ali B, Iqbal R, Kaplan A, Ali MA, Elshikh MS, Ercisli S. Physiological and Germination Responses of Muskmelon ( Cucumis melo L.) Seeds to Varying Osmotic Potentials and Cardinal Temperatures via a Hydrothermal Time Model. ACS OMEGA 2023; 8:33266-33279. [PMID: 37744846 PMCID: PMC10515359 DOI: 10.1021/acsomega.3c01100] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/18/2023] [Accepted: 08/09/2023] [Indexed: 09/26/2023]
Abstract
Climatic changes have a direct negative impact on the growth, development, and productivity of crops. The water potential (ψ) and temperature (T) are important limiting factors that influence the rate of seed germination and growth indices. To examine how the germination of seed responds to changes in water potential and temperature, the hydrotime model and hydrothermal model (HTT) have been employed. The HTT calculates the concept of germination time across temperatures, between Tb-To, with alteration, and between Tb-Tc, in supra-optimal ranges. The seeds of Cucumis melo L. were germinated in the laboratory for a hydro-thermal time experiment. Seeds were sown in Petri dishes containing a double-layered filter paper at different osmotic potentials (0, -0.2, -0.4, -0.6, and -0.8 MPa) by providing PEG 6000 (drought stress enhancer) at different temperatures (15, 20, 25, 30, and 35 °C). The controlled replicate was treated with 10 mL of distilled water and the rest with 10 mL of PEG solution. Results indicated that the seed vigor index (SVI-II) was highest at 15 °C with 0 MPa and lowest at 30 °C with -0.2 MPa. However, the highest activity was shown at 15 °C by catalase (CAT) and guaiacol peroxidase (GPX) at (-0.6 MPa), while the lowest values of CAT and GPX were recorded for control at 35 °C with -0.8 MPa at 35 °C, respectively. Germination energy was positively correlated with germination index (GI), germination percentage (G%), germination rate index, seed vigor index-I (SVI-I), mean moisture content (MMC), and root shoot ratio (RSR) and had a negative correlation with mean germination rate, percent moisture content of shoot and root, CAT, superoxide dismutase, peroxidase ascorbate peroxidase, and GPX. In conclusion, thermal and hydrotime models correctly predicted muskmelon germination time in response to varying water potential and temperature. The agronomic attributes were found to be maximum at 30 °C and minimum at 15 °C.
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Affiliation(s)
- Ijaz ul Haq
- Department
of Botany, University of Peshawar, Peshawar 25120, Pakistan
| | - Sami Ullah
- Department
of Botany, University of Peshawar, Peshawar 25120, Pakistan
| | - Fazal Amin
- Department
of Botany, University of Peshawar, Peshawar 25120, Pakistan
| | - Muhammad Nafees
- Department
of Botany, University of Peshawar, Peshawar 25120, Pakistan
| | - Wadood Shah
- Biological
Sciences Research Division, Pakistan Forest
Institute, Peshawar 25120, Pakistan
| | - Baber Ali
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Rashid Iqbal
- Department
of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur Pakistan, Bahawalpur 63100, Pakistan
- Department
of Agroecology-Climate and Water, Aarhus
University, Blichers
Allé 20, 8830 Tjele, Denmark
| | - Alevcan Kaplan
- Department
of Crop and Animal Production, Sason Vocational School, Batman Universitesi, Batman 72060, Turkey
| | - Mohammad Ajmal Ali
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh11451, Saudi Arabia
| | - Mohamed S. Elshikh
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh11451, Saudi Arabia
| | - Sezai Ercisli
- Department
of Horticulture, Agricultural Faculty, Ataturk
Universitesi, Erzurum25240, Turkiye
- HGF
Agro, Ata Teknokent, Erzurum25240 ,Turkiye
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27
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Fallah N, Pang Z, Lin Z, Nyimbo WJ, Lin W, Mbuya SN, Ishimwe C, Zhang H. Sustained organic amendments utilization enhances ratoon crop growth and soil quality by enriching beneficial metabolites and suppressing pathogenic bacteria. FRONTIERS IN PLANT SCIENCE 2023; 14:1273546. [PMID: 37790789 PMCID: PMC10544933 DOI: 10.3389/fpls.2023.1273546] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/06/2023] [Accepted: 08/28/2023] [Indexed: 10/05/2023]
Abstract
Introduction Organic soil amendments such as filter mud (FM) and biochar (BC) can potentially influence the abundance and composition of metabolites. However, our current understanding of the stimulatory effects of FM and BC's long-term impact on stress-regulating metabolites, such as abscisic acid (ABA), jasmonic acid (JA), melatonin, and phenyllactic acid (PLA), and these substrates regulatory effects on disease-causing bacteria in sugarcane ratooning field, which is susceptible to nutrients depletion, diseases, etc., remain poorly understood. Additionally, little is known about how the long-term interaction of these substrates and compounds influences sugarcane ratooning soil enzyme activities, nutrient cycling, and crop growth performance. Methods To answer these questions, we adopted metabolomics tools combined with high-throughput sequencing to explore the stimulatory effects of the long-term addition of FM and BC on metabolites (e.g., PLA and abscisic aldehyde) and quantify these substrates' regulatory effects on disease-causing bacteria, soil enzyme activities, nutrient cycling, and crop growth performance. Results The result revealed that ratoon crop weight, stem diameter, sugar content, as well as soil physico-chemical properties, including soil nitrate (NH3 +-N), organic matter (OM), total nitrogen (TN), total carbon (TC), and β-glucosidase, marked a significant increase under the BC and FM-amended soils. Whereas soil available potassium (AK), NO3 -N, cellulase activity, and phosphatase peaked under the BC-amended soil, primarily due to the enduring effects of these substrates and metabolites. Furthermore, BC and FM-amended soils enriched specific stress-regulating metabolites, including JA, melatonin, abscisic aldehyde, etc. The sustained effects of both BC and FM-amended soils suppressed disease-causing bacteria, eventually promoting ratooning soil growth conditions. A number of key bioactive compounds had distinct associations with several beneficial bacteria and soil physico-chemical properties. Discussion This study proves that long-term BC and FM application is one of the eco-friendly strategies to promote ratoon crop growth and soil quality through the enrichment of stress-regulating metabolites and the suppression of disease-causing bacteria.
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Affiliation(s)
- Nyumah Fallah
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Fujian Provincial Key Laboratory of Agro-ecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Ziqin Pang
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Fujian Provincial Key Laboratory of Agro-ecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Zhaoli Lin
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Witness Joseph Nyimbo
- Fujian Provincial Key Laboratory of Agro-ecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Wenxiong Lin
- Fujian Provincial Key Laboratory of Agro-ecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Sylvain Ntambo Mbuya
- Laboratoire de Recherche en Biofortification, Defense et Valorisation des Cultures (BioDev), Département de Production Végétale, Faculté des Sciences Agronomiques, Université de Lubumbashi, Lubumbashi, Democratic Republic of Congo
| | - Captoline Ishimwe
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops/Fujian Key Laboratory for Crop Breeding by Design, Fujian Agriculture and Forestry University, Fuzhou, China
- Experiment Station of Ministry of Agriculture and Rural Affairs for Jute and Kenaf in Southeast China/Fujian Public Platform for Germplasm Resources of Bast Fiber Crops, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Hua Zhang
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
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Raza MAS, Ibrahim MA, Ditta A, Iqbal R, Aslam MU, Muhammad F, Ali S, Çiğ F, Ali B, Muhammad Ikram R, Muzamil MN, Rahman MHU, Alwahibi MS, Elshikh MS. Exploring the recuperative potential of brassinosteroids and nano-biochar on growth, physiology, and yield of wheat under drought stress. Sci Rep 2023; 13:15015. [PMID: 37696905 PMCID: PMC10495435 DOI: 10.1038/s41598-023-42007-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Accepted: 08/04/2023] [Indexed: 09/13/2023] Open
Abstract
Drought stress as a result of rapidly changing climatic conditions has a direct negative impact on crop production especially wheat which is the 2nd staple food crop. To fulfill the nutritional demand under rapidly declining water resources, there is a dire need to adopt a precise, and efficient approach in the form of different amendments. In this regard, the present study investigated the impact of nano-biochar (NBC) and brassinosteroids (BR) in enhancing the growth and productivity of wheat under different drought stress conditions. The field study comprised different combinations of amendments (control, NBC, BR, and NBC + BR) under three irrigation levels (D0, D1 and D2). Among different treatments, the synergistic approach (NBC + BR) resulted in the maximum increase in different growth and yield parameters under normal as well as drought stress conditions. With synergistic approach (NBC + BR), the maximum plant height (71.7 cm), spike length (17.1), number of fertile tillers m-2 (410), no. of spikelets spike-1 (19.1), no. of grains spike-1 (37.9), 1000 grain weight (37 g), grain yield (4079 kg ha-1), biological yield (10,502 kg ha-1), harvest index (43.5). In the case of physiological parameters such as leaf area index, relative water contents, chlorophyll contents, and stomatal conductance were maximally improved with the combined application of NBC and BR. The same treatment caused an increase of 54, 10, and 7% in N, P, and K contents in grains, respectively compared to the control treatment. Similarly, the antioxidant response was enhanced in wheat plants under drought stress with the combined application of NBC and BR. In conclusion, the combined application of NBC and BR caused a significant increase in the growth, physiological and yield attributes of wheat under drought stress.
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Affiliation(s)
- Muhammad Aown Sammar Raza
- Department of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Bahawalpur, 63100, Pakistan.
| | - Muhammad Arif Ibrahim
- Department of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Bahawalpur, 63100, Pakistan
| | - Allah Ditta
- Department of Environmental Sciences, Shaheed Benazir Bhutto University Sheringal Dir (U), Sheringal, KPK, Pakistan
- School of Biological Sciences, the University of Western Australia, Perth, WA, 6009, Australia
| | - Rashid Iqbal
- Department of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Bahawalpur, 63100, Pakistan
| | - Muhammad Usman Aslam
- Department of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Bahawalpur, 63100, Pakistan
| | - Faqeer Muhammad
- Department of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Bahawalpur, 63100, Pakistan
| | - Shehzad Ali
- Department of Environmental Sciences, Quaid-i-Azam University, Islamabad, 45320, Pakistan
| | - Fatih Çiğ
- Department of Field Crops, Faculty of Agriculture, Siirt University, Siirt, Turkey
| | - Baber Ali
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad, 45320, Pakistan
| | | | | | - Muhammed Habib Ur Rahman
- Department of Agronomy, MNS-University of Agriculture, Multan, Pakistan.
- Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany.
- Department of Seed Science and Technology, Institute of Plant Breeding and Biotechnology (IPBB), MNS-University of Agriculture, Multan, Pakistan.
| | - Mona S Alwahibi
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh, 11451, Saudi Arabia
| | - Mohamed S Elshikh
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh, 11451, Saudi Arabia
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29
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Shumaila, Ullah S, Shah W, Hafeez A, Ali B, Khan S, Ercisli S, Al-Ghamdi AA, Elshikh MS. Biochar and Seed Priming Technique with Gallic Acid: An Approach toward Improving Morpho-Anatomical and Physiological Features of Solanum melongena L. under Induced NaCl and Boron Stresses. ACS OMEGA 2023; 8:28207-28232. [PMID: 38173954 PMCID: PMC10763624 DOI: 10.1021/acsomega.3c01720] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/14/2023] [Accepted: 07/12/2023] [Indexed: 01/05/2024]
Abstract
Dynamic shifts in climatic patterns increase soil salinity and boron levels, which are the major abiotic factors that affect plant growth and secondary metabolism. The present study assessed the role of growth regulators, including biochar (5 g kg-1) and gallic acid (GA, 2 mM), in altering leaf morpho-anatomical and physiological responses of Solanum melongena L. exposed to boron (25 mg kg-1) and salinity stresses (150 mM NaCl). These growth regulators enhanced leaf fresh weight (LFW) (70%), leaf dry weight (LDW) (20%), leaf area (LA), leaf area index (LAI) (85%), leaf moisture content (LMC) (98%), and relative water content (RWC) (115%) under salinity and boron stresses. Physiological attributes were analyzed to determine the stress levels and antioxidant protection. Photosynthetic pigments were negatively affected by salinity and boron stresses along with a nonsignificant reduction in trehalose, GA, osmoprotectant, and catalase (CAT) and ascorbate peroxidase (APX) activity. These parameters were improved by biochar application to soil and presoaking seeds in GA (p < 0.05) in both varieties of S. melongena L. Scanning electron microscopy (SEM) and light microscopy revealed that application of biochar and GA improved the stomatal regulation, trichome density, epidermal vigor, stomata size (SS) (13 381 μm), stomata index (SI) (354 mm2), upper epidermis thickness (UET) (123 μm), lower epidermis thickness (LET) (153 μm), cuticle thickness (CT) (11.4 μm), trichome density (TD) (23 per mm2), vein islet number (VIN) (14 per mm2), vein termination number (VTN) (19 per mm2), midrib thickness (MT) (5546 μm), and TD (27.4 mm2) under salinity and boron stresses. These results indicate that the use of inexpensive and easily available biochar and seed priming with GA can improve morpho-anatomical and physiological responses of S. melongena L. under oxidative stress conditions.
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Affiliation(s)
- Shumaila
- Department
of Botany, University of Peshawar, Peshawar 25120, Pakistan
| | - Sami Ullah
- Department
of Botany, University of Peshawar, Peshawar 25120, Pakistan
| | - Wadood Shah
- Biological
Sciences Research Division, Pakistan Forest
Institute, Peshawar 25120, Pakistan
| | - Aqsa Hafeez
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Baber Ali
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Shahid Khan
- Crops,
Environment and Land Use Programme, Crop Science Department, Teagasc, Carlow R93 XE12, Ireland
| | - Sezai Ercisli
- Department
of Horticulture, Agricultural Faculty, Ataturk
Universitesi, 25240 Erzurum, Turkey
- HGF
Agro, Ata Teknokent, 25240 Erzurum, Turkey
| | - Abdullah Ahmed Al-Ghamdi
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Mohamed S. Elshikh
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
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30
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Singh A, Mazahar S, Chapadgaonkar SS, Giri P, Shourie A. Phyto-microbiome to mitigate abiotic stress in crop plants. Front Microbiol 2023; 14:1210890. [PMID: 37601386 PMCID: PMC10433232 DOI: 10.3389/fmicb.2023.1210890] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2023] [Accepted: 07/11/2023] [Indexed: 08/22/2023] Open
Abstract
Plant-associated microbes include taxonomically diverse communities of bacteria, archaebacteria, fungi, and viruses, which establish integral ecological relationships with the host plant and constitute the phyto-microbiome. The phyto-microbiome not only contributes in normal growth and development of plants but also plays a vital role in the maintenance of plant homeostasis during abiotic stress conditions. Owing to its immense metabolic potential, the phyto-microbiome provides the host plant with the capability to mitigate the abiotic stress through various mechanisms like production of antioxidants, plant growth hormones, bioactive compounds, detoxification of harmful chemicals and toxins, sequestration of reactive oxygen species and other free radicals. A deeper understanding of the structure and functions of the phyto-microbiome and the complex mechanisms of phyto-microbiome mediated abiotic stress mitigation would enable its utilization for abiotic stress alleviation of crop plants and development of stress-resistant crops. This review aims at exploring the potential of phyto-microbiome to alleviate drought, heat, salinity and heavy metal stress in crop plants and finding sustainable solutions to enhance the agricultural productivity. The mechanistic insights into the role of phytomicrobiome in imparting abiotic stress tolerance to plants have been summarized, that would be helpful in the development of novel bioinoculants. The high-throughput modern approaches involving candidate gene identification and target gene modification such as genomics, metagenomics, transcriptomics, metabolomics, and phyto-microbiome based genetic engineering have been discussed in wake of the ever-increasing demand of climate resilient crop plants.
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Affiliation(s)
- Anamika Singh
- Department of Botany, Maitreyi College, University of Delhi, New Delhi, India
| | - Samina Mazahar
- Department of Botany, Dyal Singh College, University of Delhi, New Delhi, India
| | - Shilpa Samir Chapadgaonkar
- Department of Biosciences and Technology, Dr. Vishwanath Karad MIT World Peace University, Pune, Maharashtra, India
| | - Priti Giri
- Department of Botany, Maitreyi College, University of Delhi, New Delhi, India
| | - Abhilasha Shourie
- Department of Biotechnology, Faculty of Engineering and Technology, Manav Rachna International Institute of Research and Studies, Faridabad, India
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31
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Din I, Khan S, Khan FU, Khan M, Khan MN, Hafeez A, Wahab S, Wahid N, Ali B, Qasim UB, Manan F, Alwahibi MS, Elshikh MS, Ercisli S, Khalifa EMA. Genetic Characterization of Advance Bread Wheat Lines for Yield and Stripe Rust Resistance. ACS OMEGA 2023; 8:25988-25998. [PMID: 37521679 PMCID: PMC10372943 DOI: 10.1021/acsomega.3c01981] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Accepted: 06/27/2023] [Indexed: 08/01/2023]
Abstract
Wheat (Triticum aestivum L.) is a prominent grain crop. The goal of the current experiment was to examine the genetic potential of advanced bread wheat genotypes for yield and stripe rust resistance. Ninety-three bread wheat genotypes including three varieties (Kohat-2017, Pakistan-2013, and Morocco) were field tested in augmented design as observational nurseries at three locations (i.e., Kohat, Nowshera, and Peshawar) during the 2018-19 crop season. Various parameters related to yield and stripe rust resistance showed significant differences among genotypes for most of the characters with few exceptions. The analysis of variance revealed significant variations for all the genotypes for all the traits at all three sites with few exceptions where nonsignificant differences were noticed among genotypes. Averaged over three locations, genotypes exhibiting maximum desirable values for yield and yield components were KT-86 (325 tillers) for tillers m-2, KT-50 (2.86 g) for grain weight spike-1, KT-49 (41.6 g) for 1000-grain weight, KT-50 (74 grains) for grains spikes-1, KT-55 (4.76 g) for spike weight, and KT-36 and KT-072 (4586 kg ha-1) for grain yield. Correlation analysis revealed that grain yield had a significant positive correlation with grain spike-1 and grain weight spike-1 at Kohat, with grains spike-1, tillers m-2, and grain weight spike-1 at Nowshera, and with plant height, spike weight, 1000-grain weight, and tillers m-2 at Peshawar. Molecular marker data and host response in the field at the adult stage revealed that Yr15 and Yr10 are both still effective in providing adequate resistance to wheat against prevalent races of stripe rust. Four lines showing desirable lower average coefficient of infection (ACI) values without carrying Yr15 and Yr10 genes show the presence of unique/new resistance gene(s) in the genetic composition of these four lines. Genotype KT-072 (4586 kg ha-1 and 1.3 ACI), KT-07 (4416 kg ha-1 and 4.3 ACI), KT-10 (4346 kg ha-1 and 1.0 ACI), and KT-62 (4338 kg ha-1 and 2.7 ACI) showed maximum values for grain yield and low desirable ACI values, and these lines could be recommended for general cultivation after procedural requirements of variety release.
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Affiliation(s)
- Israr
Ud Din
- The
University of Agriculture Peshawar, Institute
of Biotechnology and Genetic Engineering, Peshawar 25130, Pakistan
| | - Salman Khan
- Department
of Biotechnology, Abdul Wali Khan University
Mardan, Mardan 23200, Pakistan
| | - Fahim Ullah Khan
- Department
of Agriculture, Hazara University, Mansehra 21120, Pakistan
| | - Majid Khan
- The
University of Agriculture Peshawar, Institute
of Biotechnology and Genetic Engineering, Peshawar 25130, Pakistan
| | - Muhammad Nauman Khan
- Department
of Botany, Islamia College Peshawar, Peshawar 25120, Pakistan
- University
Public School, University of Peshawar, Peshawar 25120, Pakistan
| | - Aqsa Hafeez
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Sana Wahab
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Nazima Wahid
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Baber Ali
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Umair Bin Qasim
- Department
of Plant Breeding & Genetics, The University
of Agriculture Peshawar, Peshawar 25130, Pakistan
| | - Fazal Manan
- Department
of Plant Pathology, North Dakota State University, Fargo, North Dakota 58108-6050, United
States
| | - Mona S Alwahibi
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Mohamed S Elshikh
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Sezai Ercisli
- Department
of Horticulture Faculty of Agriculture, Ataturk University, Erzurum 25240, Türkiye
- HGF
Agro, Ata Teknokent, Erzurum 25240, Türkiye
| | - Ebaa Mohamed Ali Khalifa
- Agriculture
Research Center, Wheat Research Department, Field Crop Research Institute, Giza 3725005, Egypt
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32
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Chen W, Modi D, Picot A. Soil and Phytomicrobiome for Plant Disease Suppression and Management under Climate Change: A Review. PLANTS (BASEL, SWITZERLAND) 2023; 12:2736. [PMID: 37514350 PMCID: PMC10384710 DOI: 10.3390/plants12142736] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2023] [Revised: 07/17/2023] [Accepted: 07/18/2023] [Indexed: 07/30/2023]
Abstract
The phytomicrobiome plays a crucial role in soil and ecosystem health, encompassing both beneficial members providing critical ecosystem goods and services and pathogens threatening food safety and security. The potential benefits of harnessing the power of the phytomicrobiome for plant disease suppression and management are indisputable and of interest in agriculture but also in forestry and landscaping. Indeed, plant diseases can be mitigated by in situ manipulations of resident microorganisms through agronomic practices (such as minimum tillage, crop rotation, cover cropping, organic mulching, etc.) as well as by applying microbial inoculants. However, numerous challenges, such as the lack of standardized methods for microbiome analysis and the difficulty in translating research findings into practical applications are at stake. Moreover, climate change is affecting the distribution, abundance, and virulence of many plant pathogens, while also altering the phytomicrobiome functioning, further compounding disease management strategies. Here, we will first review literature demonstrating how agricultural practices have been found effective in promoting soil health and enhancing disease suppressiveness and mitigation through a shift of the phytomicrobiome. Challenges and barriers to the identification and use of the phytomicrobiome for plant disease management will then be discussed before focusing on the potential impacts of climate change on the phytomicrobiome functioning and disease outcome.
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Affiliation(s)
- Wen Chen
- Ottawa Research and Development Centre, Science and Technology Branch, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
- Department of Biology, University of Ottawa, Ottawa, ON K1N 6N5, Canada
| | - Dixi Modi
- Ottawa Research and Development Centre, Science and Technology Branch, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
| | - Adeline Picot
- Univ Brest, INRAE, Laboratoire Universitaire de Biodiversité et Écologie Microbienne, F-29280 Plouzané, France
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33
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Abeed AA, Saleem MH, Asghar MA, Mumtaz S, Ameer A, Ali B, Alwahibi MS, Elshikh MS, Ercisli S, Elsharkawy MM, Ali S, Soudy FA. Ameliorative Effects of Exogenous Potassium Nitrate on Antioxidant Defense System and Mineral Nutrient Uptake in Radish ( Raphanus sativus L.) under Salinity Stress. ACS OMEGA 2023; 8:22575-22588. [PMID: 37396242 PMCID: PMC10308581 DOI: 10.1021/acsomega.3c01039] [Citation(s) in RCA: 24] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Accepted: 05/23/2023] [Indexed: 07/04/2023]
Abstract
Soil salinization has become a major issue around the world in recent years, as it is one of the consequences of climate change as sea levels rise. It is crucial to lessen the severe consequences of soil salinization on plants. A pot experiment was conducted to regulate the physiological and biochemical mechanisms in order to evaluate the ameliorative effects of potassium nitrate (KNO3) on Raphanus sativus L. genotypes under salt stress. The results from the present study illustrated that the salinity stress induced a significant decrease in shoot length, root length, shoot fresh weight, shoot dry weight, root fresh weight, root dry weight, number of leaves per plant, leaf area chlorophyll-a, chlorophyll-b, total chlorophyll, carotenoid, net photosynthesis, stomatal conductance, and transpiration rate by 43, 67, 41, 21, 34, 28, 74, 91, 50, 41, 24, 34, 14, 26, and 67%, respectively, in a 40 day radish while decreased by 34, 61, 49, 19, 31, 27, 70, 81, 41, 16, 31, 11, 21, and 62%, respectively, in Mino radish. Furthermore, MDA, H2O2 initiation, and EL (%) of two varieties (40 day radish and Mino radish) of R. sativus increased significantly (P < 0.05) by 86, 26, and 72%, respectively, in the roots and also increased by 76, 106, and 38% in the leaves in a 40 day radish, compared to the untreated plants. The results also elucidated that the contents of phenolic, flavonoids, ascorbic acid, and anthocyanin in the two varieties (40 day radish and Mino radish) of R. sativus increased with the exogenous application of KNO3 by 41, 43, 24, and 37%, respectively, in the 40 day radish grown under the controlled treatments. Results indicated that implementing KNO3 exogenously in the soil increased the activities of antioxidants like SOD, CAT, POD, and APX by 64, 24, 36, and 84% in the roots and also increased by 21, 12, 23, and 60% in the leaves of 40 day radish while also increased by 42, 13, 18, and 60% in the roots and also increased by 13, 14, 16, and 41% in the leaves in Mino radish, respectively, in comparison to those plants grown without KNO3. We found that KNO3 substantially improved plant growth by lowering the levels of oxidative stress biomarkers, thereby further stimulating the antioxidant potential system, which led to an improved nutritional profile of both R. sativus L. genotypes under normal and stressed conditions. The current study would offer a deep theoretical foundation for clarifying the physiological and biochemical mechanisms by which the KNO3 improves salt tolerance in R. sativus L. genotypes.
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Affiliation(s)
- Amany
H. A. Abeed
- Department
of Botany and Microbiology, Faculty of Science, Assiut University, Assiut 71516, Egypt
| | - Muhammad Hamzah Saleem
- Office
of Academic Research, Office of VP for Research & Graduate Studies, Qatar University, Doha 2713, Qatar
| | - Muhammad Ahsan Asghar
- Department
of Biological Resources, Agricultural Institute,
Centre for Agricultural Research, ELKH, Brunszvik U. 2, 2462 Martonvásár, Hungary
| | - Sahar Mumtaz
- Department
of Botany, Division of Science and Technology, University of Education, Lahore 54770, Pakistan
| | - Amina Ameer
- Department
of Botany, University of Agriculture, Faisalabad 38000, Pakistan
| | - Baber Ali
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Mona S. Alwahibi
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Mohamed S. Elshikh
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Sezai Ercisli
- Department
of Horticulture Faculty of Agriculture, Ataturk University, Erzurum 25240, Türkiye
- HGF
Agro, Ata Teknokent, TR-25240 Erzurum, Türkiye
| | - Mohsen Mohamed Elsharkawy
- Department
of Agricultural Botany, Faculty of Agriculture, Kafrelsheikh University, Kafr
el-Sheikh 33516, Egypt
| | - Shafaqat Ali
- Department
of Environmental Sciences and Engineering, Government College University Faisalabad, Faisalabad 38000, Pakistan
- Department
of Biological Sciences and Technology, China
Medical University, Taichung City 40402, Taiwan
| | - Fathia A. Soudy
- Genetics
and Genetic Engineering Department, Faculty of Agriculture, Benha University, Moshtohor 13736, Egypt
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Mehmood N, Saeed M, Zafarullah S, Hyder S, Rizvi ZF, Gondal AS, Jamil N, Iqbal R, Ali B, Ercisli S, Kupe M. Multifaceted Impacts of Plant-Beneficial Pseudomonas spp. in Managing Various Plant Diseases and Crop Yield Improvement. ACS OMEGA 2023; 8:22296-22315. [PMID: 37396244 PMCID: PMC10308577 DOI: 10.1021/acsomega.3c00870] [Citation(s) in RCA: 30] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Accepted: 05/18/2023] [Indexed: 07/04/2023]
Abstract
The modern agricultural system has issues with the reduction of agricultural productivity due to a wide range of abiotic and biotic stresses. It is also expected that in the future the entire world population may rapidly increase and will surely demand more food. Farmers now utilize a massive quantity of synthetic fertilizers and pesticides for disease management and to increase food production. These synthetic fertilizers badly affect the environment, the texture of the soil, plant productivity, and human health. However, agricultural safety and sustainability depend on an ecofriendly and inexpensive biological application. In contrast to synthetic fertilizers, soil inoculation with plant-growth-promoting rhizobacteria (PGPR) is one of the excellent alternative options. In this regard, we focused on the best PGPR genera, Pseudomonas, which exists in the rhizosphere as well as inside the plant's body and plays a role in sustainable agriculture. Many Pseudomonas spp. control plant pathogens and play an effective role in disease management through direct and indirect mechanisms. Pseudomonas spp. fix the amount of atmospheric nitrogen, solubilize phosphorus and potassium, and also produce phytohormones, lytic enzymes, volatile organic compounds, antibiotics, and secondary metabolites during stress conditions. These compounds stimulate plant growth by inducing systemic resistance and by inhibiting the growth of pathogens. Furthermore, pseudomonads also protect plants during different stress conditions like heavy metal pollution, osmosis, temperature, oxidative stress, etc. Now, several Pseudomonas-based commercial biological control products have been promoted and marketed, but there are a few limitations that hinder the development of this technology for extensive usage in agricultural systems. The variability among the members of Pseudomonas spp. draws attention to the huge research interest in this genus. There is a need to explore the potential of native Pseudomonas spp. as biocontrol agents and to use them in biopesticide development to support sustainable agriculture.
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Affiliation(s)
- Najaf Mehmood
- Department
of Botany, Government College Women University
Sialkot, Sialkot 51310, Pakistan
| | - Mahnoor Saeed
- Department
of Botany, Government College Women University
Sialkot, Sialkot 51310, Pakistan
| | - Sana Zafarullah
- Department
of Botany, Government College Women University
Sialkot, Sialkot 51310, Pakistan
| | - Sajjad Hyder
- Department
of Botany, Government College Women University
Sialkot, Sialkot 51310, Pakistan
| | - Zarrin Fatima Rizvi
- Department
of Botany, Government College Women University
Sialkot, Sialkot 51310, Pakistan
| | - Amjad Shahzad Gondal
- Department
of Plant Pathology, Bahauddin Zakariya University, Multan 60000, Pakistan
| | - Nuzhat Jamil
- Department
of Botany, University of the Punjab, Quaid-i-Azam Campus, Lahore 54590, Pakistan
| | - Rashid Iqbal
- Department
of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur Pakistan, Bahawalpur 63100, Pakistan
| | - Baber Ali
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Sezai Ercisli
- Department
of Horticulture, Faculty of Agriculture, Ataturk University, Erzurum 25240, Türkiye
- HGF
Agro, Ata Teknokent, Erzurum TR-25240, Türkiye
| | - Muhammed Kupe
- Department
of Horticulture, Faculty of Agriculture, Ataturk University, Erzurum 25240, Türkiye
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Kakar H, Ullah S, Shah W, Ali B, Satti SZ, Ullah R, Muhammad Z, Eldin SM, Ali I, Alwahibi MS, Elshikh MS, Ercisli S. Seed Priming Modulates Physiological and Agronomic Attributes of Maize ( Zea mays L.) under Induced Polyethylene Glycol Osmotic Stress. ACS OMEGA 2023; 8:22788-22808. [PMID: 37396236 PMCID: PMC10308401 DOI: 10.1021/acsomega.3c01715] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/14/2023] [Accepted: 05/17/2023] [Indexed: 07/04/2023]
Abstract
Drought and osmotic stresses are major threats to agricultural crops as they affect plants during their life cycle. The seeds are more susceptible to these stresses during germination and establishment of seedlings. To cope with these abiotic stresses, various seed priming techniques have broadly been used. The present study aimed to assess seed priming techniques under osmotic stress. Osmo-priming with chitosan (1 and 2%), hydro-priming with distilled water, and thermo-priming at 4 °C were used on the physiology and agronomy of Zea mays L. under polyethylene glycol (PEG-4000)-induced osmotic stress (-0.2 and -0.4 MPa). The vegetative response, osmolyte content, and antioxidant enzymes of two varieties (Pearl and Sargodha 2002 White) were studied under induced osmotic stress. The results showed that seed germination and seedling growth were inhibited under osmotic stress and germination percentage, and the seed vigor index was enhanced in both varieties of Z. mays L. with chitosan osmo-priming. Osmo-priming with chitosan and hydro-priming with distilled water modulated the level of photosynthetic pigments and proline, which were reduced under induced osmotic stress; moreover, the activities of antioxidant enzymes were improved significantly. In conclusion, osmotic stress adversely affects the growth and physiological attributes; on the contrary, seed priming ameliorated the stress tolerance resistance of Z. mays L. cultivars to PEG-induced osmotic stress by activating the natural antioxidation enzymatic system and accumulating osmolytes.
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Affiliation(s)
| | - Sami Ullah
- Department
of Botany, University of Peshawar, Peshawar 25120, Pakistan
| | - Wadood Shah
- Biological
Sciences Research Division, Pakistan Forest
Institute, Peshawar 25120, Pakistan
| | - Baber Ali
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Sanam Zarif Satti
- Biological
Sciences Research Division, Pakistan Forest
Institute, Peshawar 25120, Pakistan
| | - Rehman Ullah
- Department
of Botany, University of Peshawar, Peshawar 25120, Pakistan
| | - Zahir Muhammad
- Department
of Botany, University of Peshawar, Peshawar 25120, Pakistan
| | - Sayed M. Eldin
- Future
University in Egypt, Center of Research, Faculty of Engineering, New Cairo 11835, Egypt
| | - Iftikhar Ali
- University
of Swat, Centre for Plant Science and Biodiversity, Charbagh 19120, Pakistan
- Department
of Genetics and Development, Columbia University
Irving Medical Center, New York, New York 10032, United States
| | - Mona S. Alwahibi
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Mohamed S. Elshikh
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Sezai Ercisli
- Department
of Horticulture, Agricultural Faculty, Ataturk
Universitesi, Erzurum 25240, Türkiye
- HGF
Agro, Ata Teknokent, TR-25240 Erzurum, Türkiye
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Ali B, Hafeez A, Afridi MS, Javed MA, Sumaira, Suleman F, Nadeem M, Ali S, Alwahibi MS, Elshikh MS, Marc RA, Ercisli S, Darwish DBE. Bacterial-Mediated Salinity Stress Tolerance in Maize ( Zea mays L.): A Fortunate Way toward Sustainable Agriculture. ACS OMEGA 2023; 8:20471-20487. [PMID: 37332827 PMCID: PMC10275368 DOI: 10.1021/acsomega.3c00723] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2023] [Accepted: 05/16/2023] [Indexed: 09/26/2023]
Abstract
Sustainable agriculture is threatened by salinity stress because of the low yield quality and low crop production. Rhizobacteria that promote plant growth modify physiological and molecular pathways to support plant development and reduce abiotic stresses. The recent study aimed to assess the tolerance capacity and impacts of Bacillus sp. PM31 on the growth, physiological, and molecular responses of maize to salinity stress. In comparison to uninoculated plants, the inoculation of Bacillus sp. PM31 improved the agro-morphological traits [shoot length (6%), root length (22%), plant height (16%), fresh weight (39%), dry weight (29%), leaf area (11%)], chlorophyll [Chl a (17%), Chl b (37%), total chl (22%)], carotenoids (15%), proteins (40%), sugars (43%), relative water (11%), flavonoids (22%), phenols (23%), radical scavenging capacity (13%), and antioxidants. The Bacillus sp. PM31-inoculated plants showed a reduction in the oxidative stress indicators [electrolyte leakage (12%), H2O2 (9%), and MDA (32%)] as compared to uninoculated plants under salinity and increased the level of osmolytes [free amino acids (36%), glycine betaine (17%), proline (11%)]. The enhancement of plant growth under salinity was further validated by the molecular profiling of Bacillus sp. PM31. Moreover, these physiological and molecular mechanisms were accompanied by the upregulation of stress-related genes (APX and SOD). Our study found that Bacillus sp. PM31 has a crucial and substantial role in reducing salinity stress through physiological and molecular processes, which may be used as an alternative approach to boost crop production and yield.
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Affiliation(s)
- Baber Ali
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad, Pakistan 45320
| | - Aqsa Hafeez
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad, Pakistan 45320
| | | | - Muhammad Ammar Javed
- Institute
of Industrial Biotechnology, Government
College University Lahore, Lahore, Pakistan 54000
| | - Sumaira
- Department
of Biotechnology, Quaid-i-Azam University, Islamabad, Pakistan 45320
| | - Faiza Suleman
- Department
of Botany, Government College University
Lahore, Lahore, Pakistan 54000
| | - Mehwish Nadeem
- Department
of Botany, Government College University, Faisalabad 38000, Pakistan
| | - Shehzad Ali
- Department
of Environmental Sciences, Quaid-i-Azam
University, Islamabad, Pakistan 45320
| | - Mona S. Alwahibi
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh, Saudi Arabia 11451
| | - Mohamed S. Elshikh
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh, Saudi Arabia 11451
| | - Romina Alina Marc
- Food
Engineering Department, Faculty of Food Science and Technology, University of Agricultural Sciences and Veterinary
Medicine of Cluj-Napoca, Cluj-Napoca, Romania 400372
| | - Sezai Ercisli
- Department
of Horticulture, Agricultural Faculty, Ataturk
Universitesi, Erzurum, Türkiye 25240
- Ata
Teknokent, HGF Agro, TR-25240 Erzurum, Türkiye
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Ullah S, Khan MI, Khan MN, Ali U, Ali B, Iqbal R, Z Gaafar AR, AlMunqedhi BM, Razak SA, Kaplan A, Ercisli S, Soudy FA. Efficacy of Naphthyl Acetic Acid Foliar Spray in Moderating Drought Effects on the Morphological and Physiological Traits of Maize Plants ( Zea mays L.). ACS OMEGA 2023; 8:20488-20504. [PMID: 37323381 PMCID: PMC10268277 DOI: 10.1021/acsomega.3c00753] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Accepted: 05/16/2023] [Indexed: 06/17/2023]
Abstract
The threat of varying global climates has greatly driven the attention of scientists, as climate change increases the odds of worsening drought in many parts of Pakistan and the world in the decades ahead. Keeping in view the forthcoming climate change, the present study aimed to evaluate the influence of varying levels of induced drought stress on the physiological mechanism of drought resistance in selected maize cultivars. The sandy loam rhizospheric soil with moisture content 0.43-0.5 g g-1, organic matter (OM) 0.43-0.55 g/kg, N 0.022-0.027 g/kg, P 0.028-0.058 g/kg, and K 0.017-0.042 g/kg was used in the present experiment. The findings showed that a significant drop in the leaf water status, chlorophyll content, and carotenoid content was linked to an increase in sugar, proline, and antioxidant enzyme accumulation at p < 0.05 under induced drought stress, along with an increase in protein content as a dominant response for both cultivars. SVI-I & II, RSR, LAI, LAR, TB, CA, CB, CC, peroxidase (POD), and superoxide dismutase (SOD) content under drought stress were studied for variance analysis in terms of interactions between drought and NAA treatment and were found significant at p < 0.05 after 15 days. It has been found that the exogenous application of NAA alleviated the inhibitory effect of only short-term water stress, but yield loss due to long-term osmotic stress will not be faced employing growth regulators. Climate-smart agriculture is the only approach to reduce the detrimental impact of global fluctuations, such as drought stress, on crop adaptability before they have a significant influence on world crop production.
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Affiliation(s)
- Sami Ullah
- Department
of Botany, University of Peshawar, Peshawar 25120, Pakistan
| | - Muhammad Ishaq Khan
- Department
of Botany, Bacha Khan University Charsadda, Charsadda 24420, Pakistan
| | - Muhammad Nauman Khan
- Department
of Botany, Islamia College Peshawar, Peshawar 25120, Pakistan
- Biology
laboratory, University Public School, University
of Peshawar, Peshawar 25120 KPK, Pakistan
| | - Usman Ali
- Centre
of Plant Biodiversity, University of Peshawar, Peshawar 25120, Pakistan
| | - Baber Ali
- , Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Rashid Iqbal
- Department
of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur Pakistan, Bahawalpur 63100, Pakistan
- Department
of Agroecology-Climate and Water, Aarhus
University, Blichers
Allé 20, 8830 Tjele, Denmark
| | - Abdel-Rhman Z Gaafar
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Bandar M. AlMunqedhi
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Sarah Abdul Razak
- Institute
of Biological Sciences, Faculty of Science, Universiti Malaya, Kuala
Lumpur 50603, Malaysia
| | - Alevcan Kaplan
- Department of Crop and Animal Production,
Sason Vocational School, Batman University, Batman 72060, Turkey
| | - Sezai Ercisli
- Department of Horticulture,
Agricultural Faculty, Ataturk Universitesi, Erzurum 25240, Türkiye
- HGF Agro, Ata Teknokent, TR-25240 Erzurum, Türkiye
| | - Fathia A. Soudy
- Genetics and Genetic Engineering Department,
Faculty of Agriculture, Benha University, Benha 13736 Egypt
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Shahzadi E, Nawaz M, Iqbal N, Ali B, Adnan M, Saleem MH, Okla MK, Abbas ZK, Al-Qahtani SM, Al-Harbi NA, Marc RA. Silicic and Ascorbic Acid Induced Modulations in Photosynthetic, Mineral Uptake, and Yield Attributes of Mung Bean ( Vigna radiata L. Wilczek) under Ozone Stress. ACS OMEGA 2023; 8:13971-13981. [PMID: 37091383 PMCID: PMC10116534 DOI: 10.1021/acsomega.3c00376] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Accepted: 03/29/2023] [Indexed: 05/03/2023]
Abstract
Most of the world's crop production and plant growth are anticipated to be seriously threatened by the increasing tropospheric ozone (O3) levels. The current study demonstrates how different mung bean genotypes reacted to the elevated level of O3 in the presence of exogenous ascorbic and silicic acid treatments. It is the first report to outline the potential protective effects of ascorbic and silicic acid applications against O3 toxicity in 12 mung bean {Vigna radiata (L.) Wilken} varieties. Under controlled circumstances, the present investigation was conducted in a glass house. There were four different treatments used: control (ambient O3 concentration of 40-45 ppb), elevated O3 (120 ppb), elevated O3 with silicic acid (0.1 mM), and elevated O3 with ascorbic acid (10 mM). Three varieties, viz. NM 20-21, NM 2006, and NM 2016, showcased tolerance to O3 toxicity. Our findings showed that ascorbic and silicic acid applications gradually increased yield characteristics such as seed yield, harvest index, days to maturity, and characteristics related to gas exchange such as transpiration rate, stomatal conductance, net photosynthetic activity, and water-use efficiency. Compared to the control, applying both growth regulators enhanced the mineral uptake across all treatments. Based on the findings of the current study, it is concluded that the subject mung bean genotypes responded to silicic acid treatment more efficiently than ascorbic acid to mitigate the harmful effects of O3 stress.
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Affiliation(s)
- Eram Shahzadi
- Department
of Botany, Government College University
Faisalabad, Faisalabad 38000, Punjab, Pakistan
| | - Muhammad Nawaz
- Department
of Botany, Government College University
Faisalabad, Faisalabad 38000, Punjab, Pakistan
| | - Naeem Iqbal
- Department
of Botany, Government College University
Faisalabad, Faisalabad 38000, Punjab, Pakistan
| | - Baber Ali
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Muhammad Adnan
- School
of Environment and Natural Resources, The
Ohio State University, Columbus, Ohio 43210-1132, United States
| | - Muhammad Hamzah Saleem
- Office
of Academic Research, Office of VP for Research & Graduate Studies, Qatar University, Doha 2713, Qatar
| | - Mohammad K. Okla
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Zahid Khorshid Abbas
- Biology
Department,
College of Science, University of Tabuk, Tabuk 71421, Saudi Arabia
| | - Salem Mesfir Al-Qahtani
- Biology
Department, University College of Taymma, University of Tabuk, P.O. Box 741, Tabuk 71421, Saudi Arabia
| | - Nadi Awad Al-Harbi
- Biology
Department, University College of Taymma, University of Tabuk, P.O. Box 741, Tabuk 71421, Saudi Arabia
| | - Romina Alina Marc
- Food
Engineering Department, Faculty of Food Science and Technology, University of Agricultural Sciences and Veterinary
Medicine of Cluj-Napoca, 3-5 Calea Mănă̧stur Street, Cluj-Napoca 400372, Romania
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Michl K, Berg G, Cernava T. The microbiome of cereal plants: The current state of knowledge and the potential for future applications. ENVIRONMENTAL MICROBIOME 2023; 18:28. [PMID: 37004087 PMCID: PMC10064690 DOI: 10.1186/s40793-023-00484-y] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/02/2022] [Accepted: 03/16/2023] [Indexed: 06/19/2023]
Abstract
The plant microbiota fulfils various crucial functions related to host health, fitness, and productivity. Over the past years, the number of plant microbiome studies continued to steadily increase. Technological advancements not only allow us to produce constantly increasing datasets, but also to extract more information from them in order to advance our understanding of plant-microbe interactions. The growing knowledge base has an enormous potential to improve microbiome-based, sustainable agricultural practices, which are currently poorly understood and have yet to be further developed. Cereal plants are staple foods for a large proportion of the world's population and are therefore often implemented in microbiome studies. In the present review, we conducted extensive literature research to reflect the current state of knowledge in terms of the microbiome of the four most commonly cultivated cereal plants. We found that currently the majority of available studies are targeting the wheat microbiome, which is closely followed by studies on maize and rice. There is a substantial gap, in terms of published studies, addressing the barley microbiome. Overall, the focus of most microbiome studies on cereal plants is on the below-ground microbial communities, and there is more research on bacteria than on fungi and archaea. A meta-analysis conducted in the frame of this review highlights microbiome similarities across different cereal plants. Our review also provides an outlook on how the plant microbiota could be harnessed to improve sustainability of cereal crop production.
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Affiliation(s)
- Kristina Michl
- Institute of Environmental Biotechnology, Graz University of Technology, Petersgasse 12, Graz, 8010 Austria
| | - Gabriele Berg
- Institute of Environmental Biotechnology, Graz University of Technology, Petersgasse 12, Graz, 8010 Austria
- Leibniz Institute for Agricultural Engineering and Bioeconomy (ATB), Max-Eyth Allee 100, 14469 Potsdam, Germany
- Institute for Biochemistry and Biology, University of Potsdam, 14476 Potsdam, Golm, OT Germany
| | - Tomislav Cernava
- Institute of Environmental Biotechnology, Graz University of Technology, Petersgasse 12, Graz, 8010 Austria
- School of Biological Sciences, Faculty of Environmental and Life Sciences, Southampton, SO17 1BJ UK
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Ahmed J, Qadir G, Ansar M, Wattoo FM, Javed T, Ali B, Marc RA, Rahimi M. Shattering and yield expression of sesame (Sesamum indicum L) genotypes influenced by paclobutrazol concentration under rainfed conditions of Pothwar. BMC PLANT BIOLOGY 2023; 23:137. [PMID: 36907856 PMCID: PMC10009968 DOI: 10.1186/s12870-023-04145-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Accepted: 02/28/2023] [Indexed: 06/18/2023]
Abstract
Seed shattering is a critical challenge that significantly reduces sesame production by 50%. These shattering losses can be reduced by selecting shattering resistant genotypes or by incorporating modern agronomic management such as paclobutrazol, which can boost productivity and prevent seed shattering in sesame. Two-years of field trials were conducted to examine the effect of sesame genotypes, environment, and paclobutrazol (PBZ) concentrations. Twelve sesame genotypes were used in a four-way factorial RCBD with three replications and five PBZ concentrations (T0 = Control; T1 = 150; T2 = 300; T3 = 450; and T4 = 600 mg L- 1) under rainfed conditions of Pothwar. The findings revealed significant variations in the major effects of all examined variables (genotypes, locations, years, and PBZ levels). Sesame genotypes PI-154304 and PI-175907 had the highest plant height, number of capsule plant- 1, seed capsule- 1, 1000 seed weight, biological yield, and seed yield, while also having the lowest seed losses and shattering percentage. Regarding environments, NARC-Islamabad generated the highest plant height, number of capsule plant- 1, shattering percentage, and biological yield; however, the URF-Koont produced the highest seed yield with the lowest shattering percentage. Additionally, plant height, capsules plant- 1, and biological yield were higher in 2021, while seed capsule- 1, 1000 seed weight, seed losses, shattering percentage, and seed yield were higher in 2020. PBZ concentration affected all measured parameters; plant height and number of seed capsule- 1 decreased with increasing PBZ concentrations. 450 mg L- 1 PBZ concentration generated the highest biomass, number of capsules plant- 1, and seed yield. At the same time, PBZ concentration 600 mg L- 1 generated the smallest plant, the lowest seed capsules- 1, the greatest thousand seed weight, and the lowest shattering percentage. The study concluded that paclobutrazol could dramatically reduce shattering percentage and shattering losses while increasing economic returns through better productivity. Based on the findings, the genotypes PI-154304 and PI-175907 with paclobutrazol level 450 mgL- 1 may be suggested for cultivation in Pothwar farming community under rainfed conditions, as they showed promising shattering resistance as well as enhanced growth and yield.
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Affiliation(s)
- Jahangir Ahmed
- Department of Agronomy, PMAS – Arid Agriculture University Rawalpindi, Rawalpindi, 46300 Pakistan
| | - Ghulam Qadir
- Department of Agronomy, PMAS – Arid Agriculture University Rawalpindi, Rawalpindi, 46300 Pakistan
| | - Muhammad Ansar
- Department of Agronomy, PMAS – Arid Agriculture University Rawalpindi, Rawalpindi, 46300 Pakistan
| | - Fahad Masoud Wattoo
- Department of Plant Breeding & Genetics, PMAS – Arid Agriculture University Rawalpindi, Rawalpindi, 46300 Pakistan
| | - Talha Javed
- Department of Agronomy, University of Agriculture, Faisalabad, 38040 Pakistan
| | - Baber Ali
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad, 45320 Pakistan
| | - Romina Alina Marc
- Food Engineering Department, Faculty of Food Science and Technology, University of Agricultural Science and Veterinary Medicine Cluj-Napoca, 3-5 CaleaMănă̧stur Street, 400372 Cluj-Napoca, Romania
| | - Mehdi Rahimi
- Department of Biotechnology, Institute of Science and High Technology and Environmental Sciences, Graduate University of Advanced Technology, Kerman, Iran
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Salinity stress improves antioxidant potential by modulating physio-biochemical responses in Moringa oleifera Lam. Sci Rep 2023; 13:2895. [PMID: 36807545 PMCID: PMC9938910 DOI: 10.1038/s41598-023-29954-6] [Citation(s) in RCA: 45] [Impact Index Per Article: 22.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Accepted: 02/13/2023] [Indexed: 02/20/2023] Open
Abstract
Moringa oleifera Lam. is a common edible plant, famous for several nutritional and therapeutic benefits. This study investigates the salt -induced modulations in plant growth, physio-biochemical responses, and antioxidant performance of M. oleifera grown under 0, 50, and 100 mM NaCl concentrations. Results showed that the plant effectively managed moderate salinity (50 mM NaCl) by maintaining succulence, weight ratios, and biomass allocation patterns of both shoot and root with minimal reduction in dry biomass. However, high salinity (100 mM NaCl) remarkably declined all growth parameters. The plant accumulated more Na+ and Cl-, while less K+ under salinity as compared to the control. Consequently, osmotic potentials of both root and leaf decreased under salinity, which was corroborated by the high amount of proline and soluble sugars. Increased level of H2O2 with significantly unchanged membrane fluidity indicating its role in perceiving and managing stress at moderate salinity. In addition, increased activities of superoxide dismutase, and catalase, with increased glutathione and flavonoid contents suggest an integrated participation of both enzymatic and non-enzymatic antioxidant components in regulating ROS. On the other hand, high salinity caused an outburst of ROS indicated by high H2O2, MDA, and electrolyte leakage. As a response, moringa drastically increased the activities of all antioxidant enzymes and contents of antioxidant molecules including ascorbic acid, glutathione, total phenols, and flavonoids with high radical scavenging and reducing power capacities. However, a considerable amount of energy was used in such management resulting in a significant growth reduction at 100 mM NaCl. This study suggests that moringa effectively resisted moderate salinity by modulating physio-biochemical attributes and effectively managing ion toxicity and oxidative stress. Salt stress also enhanced the medicinal potentials of moringa by increasing the contents of antioxidant compounds including ascorbic acid, glutathione, total phenols, and flavonoids and their resulting activities. It can be grown on degraded/ saline lands and biomass of this plant can be used for edible and medicinal purposes, besides providing other benefits in a global climate change scenario.
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Sun Y, Ma L, Ma J, Li B, Zhu Y, Chen F. Combined application of plant growth-promoting bacteria and iron oxide nanoparticles ameliorates the toxic effects of arsenic in Ajwain ( Trachyspermum ammi L.). FRONTIERS IN PLANT SCIENCE 2022; 13:1098755. [PMID: 36643291 PMCID: PMC9832315 DOI: 10.3389/fpls.2022.1098755] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Accepted: 12/02/2022] [Indexed: 06/01/2023]
Abstract
Soil contamination with toxic heavy metals [such as arsenic (As)] is becoming a serious global problem because of the rapid development of the social economy. Although plant growth-promoting bacteria (PGPB) and nanoparticles (NPs) are the major protectants to alleviate metal toxicity, the study of these chemicals in combination to ameliorate the toxic effects of As is limited. Therefore, the present study was conducted to investigate the combined effects of different levels of Providencia vermicola (5 ppm and 10 ppm) and iron oxide nanoparticles (FeO-NPs) (50 mg/l-1 and 100 mg/l-1) on plant growth and biomass, photosynthetic pigments, gas exchange attributes, oxidative stress and response of antioxidant compounds (enzymatic and non-enzymatic), and their specific gene expression, sugars, nutritional status of the plant, organic acid exudation pattern As accumulation from the different parts of the plants, and electron microscopy under the soil, which was spiked with different levels of As [0 μM (i.e., no As), 50 μM, and 100 μM] in Ajwain (Trachyspermum ammi L.) seedlings. Results from the present study showed that the increasing levels of As in the soil significantly (p< 0.05) decreased plant growth and biomass, photosynthetic pigments, gas exchange attributes, sugars, and nutritional contents from the roots and shoots of the plants, and destroyed the ultra-structure of membrane-bound organelles. In contrast, increasing levels of As in the soil significantly (p< 0.05) increased oxidative stress indicators in term of malondialdehyde, hydrogen peroxide, and electrolyte leakage, and also increased organic acid exudation patter in the roots of T. ammi seedlings. The negative impact of As toxicity can overcome the application of PGPB (P. vermicola) and FeO-NPs, which ultimately increased plant growth and biomass by capturing the reactive oxygen species, and decreased oxidative stress in T. ammi seedlings by decreasing the As contents in the roots and shoots of the plants. Our results also showed that the FeO-NPs were more sever and showed better results when we compared with PGPB (P. vermicola) under the same treatment of As in the soil. Research findings, therefore, suggest that the combined application of P. vermicola and FeO-NPs can ameliorate As toxicity in T. ammi seedlings, resulting in improved plant growth and composition under metal stress, as depicted by balanced exudation of organic acids.
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Affiliation(s)
- Yan Sun
- School of Public Administration, Hohai University, Nanjing, China
| | - Li Ma
- School of Public Administration, Hohai University, Nanjing, China
| | - Jing Ma
- School of Public Administration, Hohai University, Nanjing, China
- School of Environmental Science and Spatial Informatics, China University of Mining and Technology, Xuzhou, China
| | - Bingkun Li
- School of Public Administration, Hohai University, Nanjing, China
| | - Yanfeng Zhu
- School of Environmental Science and Spatial Informatics, China University of Mining and Technology, Xuzhou, China
| | - Fu Chen
- School of Public Administration, Hohai University, Nanjing, China
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Torres-Ortega R, Guillén-Alonso H, Alcalde-Vázquez R, Ramírez-Chávez E, Molina-Torres J, Winkler R. In Vivo Low-Temperature Plasma Ionization Mass Spectrometry (LTP-MS) Reveals Regulation of 6-Pentyl-2H-Pyran-2-One (6-PP) as a Physiological Variable during Plant-Fungal Interaction. Metabolites 2022; 12:metabo12121231. [PMID: 36557269 PMCID: PMC9783819 DOI: 10.3390/metabo12121231] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Revised: 11/22/2022] [Accepted: 11/29/2022] [Indexed: 12/13/2022] Open
Abstract
Volatile organic compounds (VOCs) comprises a broad class of small molecules (up to ~300 g/mol) produced by biological and non-biological sources. VOCs play a vital role in an organism's metabolism during its growth, defense, and reproduction. The well-known 6-pentyl-α-pyrone (6-PP) molecule is an example of a major volatile biosynthesized by Trichoderma atroviride that modulates the expression of PIN auxin-transport proteins in primary roots of Arabidopsis thaliana during their relationship. Their beneficial relation includes lateral root formation, defense induction, and increased plant biomass production. The role of 6-PP has been widely studied due to its relevance in this cross-kingdom relationship. Conventional VOCs measurements are often destructive; samples require further preparation, and the time resolution is low (around hours). Some techniques enable at-line or real-time analyses but are highly selective to defined compounds. Due to these technical constraints, it is difficult to acquire relevant information about the dynamics of VOCs in biological systems. Low-temperature plasma (LTP) ionization allows the analysis of a wide range of VOCs by mass spectrometry (MS). In addition, LTP-MS requires no sample preparation, is solvent-free, and enables the detection of 6-PP faster than conventional analytical methods. Applying static statistical methods such as Principal Component Analysis (PCA) and Discriminant Factorial Analysis (DFA) leads to a loss of information since the biological systems are dynamic. Thus, we applied a time series analysis to find patterns in the signal changes. Our results indicate that the 6-PP signal is constitutively emitted by T. atroviride only; the signal shows high skewness and kurtosis. In A. thaliana grown alone, no signal corresponding to 6-PP is detected above the white noise level. However, during T. atroviride-A. thaliana interaction, the signal performance showed reduced skewness and kurtosis with high autocorrelation. These results suggest that 6-PP is a physiological variable that promotes homeostasis during the plant-fungal relationship. Although the molecular mechanism of this cross-kingdom control is still unknown, our study indicates that 6-PP has to be regulated by A. thaliana during their interaction.
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Affiliation(s)
- Rosina Torres-Ortega
- Department of Biotechnology and Biochemistry, Center for Research and Advanced Studies (CINVESTAV), Irapuato 36824, Mexico
- UGA-Langebio, Center for Research and Advanced Studies (CINVESTAV) Irapuato, Km. 9.6 Libramiento Norte Carr. Irapuato-León, Irapuato 36824, Mexico
| | - Héctor Guillén-Alonso
- Department of Biotechnology and Biochemistry, Center for Research and Advanced Studies (CINVESTAV), Irapuato 36824, Mexico
- UGA-Langebio, Center for Research and Advanced Studies (CINVESTAV) Irapuato, Km. 9.6 Libramiento Norte Carr. Irapuato-León, Irapuato 36824, Mexico
- Department of Biochemical Engineering, Nacional Technological Institute, Celaya 38010, Mexico
| | - Raúl Alcalde-Vázquez
- Department of Biotechnology and Biochemistry, Center for Research and Advanced Studies (CINVESTAV), Irapuato 36824, Mexico
- UGA-Langebio, Center for Research and Advanced Studies (CINVESTAV) Irapuato, Km. 9.6 Libramiento Norte Carr. Irapuato-León, Irapuato 36824, Mexico
| | - Enrique Ramírez-Chávez
- Department of Biotechnology and Biochemistry, Center for Research and Advanced Studies (CINVESTAV), Irapuato 36824, Mexico
| | - Jorge Molina-Torres
- Department of Biotechnology and Biochemistry, Center for Research and Advanced Studies (CINVESTAV), Irapuato 36824, Mexico
| | - Robert Winkler
- Department of Biotechnology and Biochemistry, Center for Research and Advanced Studies (CINVESTAV), Irapuato 36824, Mexico
- UGA-Langebio, Center for Research and Advanced Studies (CINVESTAV) Irapuato, Km. 9.6 Libramiento Norte Carr. Irapuato-León, Irapuato 36824, Mexico
- Correspondence:
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Afridi MS, Ali S, Salam A, César Terra W, Hafeez A, Ali B, S AlTami M, Ameen F, Ercisli S, Marc RA, Medeiros FHV, Karunakaran R. Plant Microbiome Engineering: Hopes or Hypes. BIOLOGY 2022; 11:biology11121782. [PMID: 36552290 PMCID: PMC9774975 DOI: 10.3390/biology11121782] [Citation(s) in RCA: 40] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Revised: 11/29/2022] [Accepted: 11/30/2022] [Indexed: 12/13/2022]
Abstract
Rhizosphere microbiome is a dynamic and complex zone of microbial communities. This complex plant-associated microbial community, usually regarded as the plant's second genome, plays a crucial role in plant health. It is unquestioned that plant microbiome collectively contributes to plant growth and fitness. It also provides a safeguard from plant pathogens, and induces tolerance in the host against abiotic stressors. The revolution in omics, gene-editing and sequencing tools have somehow led to unravel the compositions and latent interactions between plants and microbes. Similarly, besides standard practices, many biotechnological, (bio)chemical and ecological methods have also been proposed. Such platforms have been solely dedicated to engineer the complex microbiome by untangling the potential barriers, and to achieve better agriculture output. Yet, several limitations, for example, the biological obstacles, abiotic constraints and molecular tools that capably impact plant microbiome engineering and functionality, remained unaddressed problems. In this review, we provide a holistic overview of plant microbiome composition, complexities, and major challenges in plant microbiome engineering. Then, we unearthed all inevitable abiotic factors that serve as bottlenecks by discouraging plant microbiome engineering and functionality. Lastly, by exploring the inherent role of micro/macrofauna, we propose economic and eco-friendly strategies that could be harnessed sustainably and biotechnologically for resilient plant microbiome engineering.
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Affiliation(s)
- Muhammad Siddique Afridi
- Department of Plant Pathology, Federal University of Lavras, (UFLA), Lavras 37200-900, MG, Brazil
| | - Sher Ali
- Department of Food Engineering, Faculty of Animal Science and Food Engineering, University of São Paulo (USP), Pirassununga 13635-900, SP, Brazil
| | - Abdul Salam
- Zhejiang Key Laboratory of Crop Germplasm, Department of Agronomy, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Willian César Terra
- Department of Plant Pathology, Federal University of Lavras, (UFLA), Lavras 37200-900, MG, Brazil
| | - Aqsa Hafeez
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Baber Ali
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Mona S AlTami
- Biology Department, College of Science, Qassim University, Burydah 52571, Saudi Arabia
| | - Fuad Ameen
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Sezai Ercisli
- Department of Horticulture, Faculty of Agriculture, Ataturk University, 25240 Erzurum, Turkey
| | - Romina Alina Marc
- Food Engineering Department, Faculty of Food Science and Technology, University of Agricultural Science and Veterinary Medicine Cluj-Napoca, 3-5 Calea Mănă ̧stur Street, 400372 Cluj-Napoca, Romania
| | - Flavio H V Medeiros
- Department of Plant Pathology, Federal University of Lavras, (UFLA), Lavras 37200-900, MG, Brazil
| | - Rohini Karunakaran
- Unit of Biochemistry, Centre of Excellence for Biomaterials Engineering, Faculty of Medicine, AIMST University, Semeling, Bedong 08100, Malaysia
- Department of Computational Biology, Institute of Bioinformatics, Saveetha School of Engineering (SSE), SIMATS, Thandalam, Chennai 602105, Tamil Nadu, India
- Centre of Excellence for Biomaterials Science, AIMST University, Semeling, Bedong 08100, Malaysia
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Wang H, Wang Y, Kang C, Wang S, Zhang Y, Yang G, Zhou L, Xiang Z, Huang L, Liu D, Guo L. Drought stress modifies the community structure of root-associated microbes that improve Atractylodes lancea growth and medicinal compound accumulation. FRONTIERS IN PLANT SCIENCE 2022; 13:1032480. [PMID: 36531372 PMCID: PMC9756954 DOI: 10.3389/fpls.2022.1032480] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Accepted: 11/11/2022] [Indexed: 06/17/2023]
Abstract
Atractylodes lancea is an important medicinal plant in traditional Chinese medicine, its rhizome is rich of volatile secondary metabolites with medicinal values and is largely demanded in modern markets. Currently, supply of high-yield, high-quality A. lancea is mainly achieved via cultivation. Certain soil microbes can benefit plant growth, secondary metabolism and induce resistance to environmental stresses. Hence, studies on the effects of soil microbe communities and isolates microorganisms on A. lancea is extremely meaningful for future application of microbes on cultivation. Here we investigated the effects of the inoculation with an entire soil microbial community on the growth, resistance to drought, and accumulation of major medicinal compounds (hinesol, β-eudesmol, atractylon and atractylodin) of A. lancea. We analyzed the interaction between A. lancea and the soil microbes at the phylum and genus levels under drought stress of different severities (inflicted by 0%, 10% and 25% PEG6000 treatments). Our results showed that inoculation with soil microbes promoted the growth, root biomass yield, medicinal compound accumulation, and rendered drought-resistant traits of A. lancea, including relatively high root:shoot ratio and high root water content under drought. Moreover, our results suggested drought stress was more powerful than the selectivity of A. lancea in shaping the root-associated microbial communities; also, the fungal communities had a stronger role than the bacterial communities in protecting A. lancea from drought. Specific microbial clades that might have a role in protecting A. lancea from drought stress were identified: at the genus level, the rhizospheric bacteria Bacillus, Dylla and Actinomadura, and rhizospheric fungi Chaetomium, Acrophialophora, Trichoderma and Thielava, the root endophytic bacteria Burkholderia-Caballeronia-Paraburkholderia, Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium, Dylla and Actinomadura, and the root endophytic fungus Fusarium were closely associated with A. lancea under drought stress. Additionally, we acquired several endophytic Paenibacillus, Paraburkholderia and Fusarium strains and verified they had differential promoting effects on the medicinal compound accumulation in A. lancea root. This study reports the interaction between A. lancea and soil microbe communities under drought stress, and provides insights for improving the outcomes in A. lancea farming via applying microbe inoculation.
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Affiliation(s)
- Hongyang Wang
- State Key Laboratory Breeding Base of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China
- Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing, China
| | - Yuefeng Wang
- State Key Laboratory Breeding Base of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China
- Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing, China
| | - Chuanzhi Kang
- State Key Laboratory Breeding Base of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China
- Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing, China
| | - Sheng Wang
- State Key Laboratory Breeding Base of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China
- Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing, China
| | - Yan Zhang
- State Key Laboratory Breeding Base of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China
- Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing, China
| | - Guang Yang
- State Key Laboratory Breeding Base of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China
- Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing, China
| | - Li Zhou
- State Key Laboratory Breeding Base of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China
- Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing, China
| | - Zengxu Xiang
- College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Luqi Huang
- Chinese Academy of Chinese Medical Sciences, Beijing, China
| | - Dahui Liu
- Pharmacy Faculty, Hubei University of Chinese Medicine, Wuhan, China
| | - Lanping Guo
- State Key Laboratory Breeding Base of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China
- Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing, China
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Ma J, Ali S, Saleem MH, Mumtaz S, Yasin G, Ali B, Al-Ghamdi AA, Elshikh MS, Vodnar DC, Marc RA, Rehman A, Khan MN, Chen F, Ali S. Short-term responses of Spinach ( Spinacia oleracea L.) to the individual and combinatorial effects of Nitrogen, Phosphorus and Potassium and silicon in the soil contaminated by boron. FRONTIERS IN PLANT SCIENCE 2022; 13:983156. [PMID: 36212291 PMCID: PMC9540599 DOI: 10.3389/fpls.2022.983156] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Accepted: 08/09/2022] [Indexed: 05/09/2023]
Abstract
While of lesser prevalence than boron (B) deficient soils, B-rich soils are important to study as they can cause B toxicity in the field and subsequently decrease crop yields in different regions of the world. We have conducted the present study to examine the role of the individual or combined application of silicon (Si) and NPK fertilizer in B-stressed spinach plants (Spinacia oleracea L.). S. oleracea seedlings were subjected to different NPK fertilizers, namely, low NPK (30 kg ha-2) and normal NPK (60 kg ha-2)], which were also supplemented by Si (3 mmol L-1), for varying levels of B in the soil i.e., 0, 250, and 500 mg kg-1. Our results illustrated that the increasing levels of B in the soil caused a substantial decrease in the plant height, number of leaves, number of stems, leaf area, plant fresh weight, plant dry weight, chlorophyll a, chlorophyll b, total chlorophyll, carotenoid content, net photosynthesis, stomatal conductance, transpiration rate, magnesium content in the roots, magnesium contents in the shoots, phosphorus content in the roots, phosphorus content in the leaves in the shoots, iron content in the roots, iron content in the shoots, calcium content in the roots, and calcium content in the shoots. However, B toxicity in the soil increased the concentration of malondialdehyde, hydrogen peroxide, and electrolyte leakage which were also manifested by the increasing activities of enzymatic [superoxidase dismutase (SOD), peroxidase (POD), catalase (CAT), and ascorbate peroxidase (APX)], and non-enzymatic antioxidants (phenolic, flavonoid, ascorbic acid, and anthocyanin content). B toxicity in the soil further increased the concentration of organic acids in the roots such as oxalic acid, malic acid, formic acid, citric acid, acetic acid, and fumaric acid. The addition of Si and fertilizer levels in the soil significantly alleviated B toxicity effects on S. oleracea by improving photosynthetic capacity and ultimately plant growth. The increased activity of antioxidant enzymes in Si and NPK-treated plants seems to play a role in capturing stress-induced reactive oxygen species, as was evident from the lower levels of oxidative stress indicators, organic acid exudation, and B concentration in the roots and shoots of Si and NPK-treated plants. Research findings, therefore, suggested that the Si and NPK application can ameliorate B toxicity in S. oleracea seedlings and result in improved plant growth and composition under metal stress as depicted by the balanced exudation of organic acids.
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Affiliation(s)
- Jing Ma
- School of Public Administration, Hohai University, Nanjing, China
| | - Sajjad Ali
- Department of Botany, Bacha Khan University, Charsadda, Pakistan
| | | | - Sahar Mumtaz
- Department of Botany, Division of Science and Technology, University of Education, Lahore, Pakistan
| | - Ghulam Yasin
- Institute of Botany, Bahauddin Zakariya University, Multan, Pakistan
| | - Baber Ali
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad, Pakistan
| | - Abdullah Ahmed Al-Ghamdi
- Department of Botany and Microbiology, College of Sciences, King Saud University, Riyadh, Saudi Arabia
| | - Mohamed S. Elshikh
- Department of Botany and Microbiology, College of Sciences, King Saud University, Riyadh, Saudi Arabia
| | - Dan C. Vodnar
- Institute of Life Sciences, Faculty of Food Science and Technology, University of Agricultural Sciences and Veterinary Medicine, Cluj-Napoca, Romania
| | - Romina Alina Marc
- Food Engineering Department, Faculty of Food Science and Technology, University of Agricultural Science and Veterinary Medicine Cluj-Napoca, Cluj-Napoca, Romania
| | - Abdur Rehman
- Department of Botany, Bacha Khan University, Charsadda, Pakistan
| | - Muhammad Nauman Khan
- Biology Laboratory, Agriculture University Public School and College (AUPS&C) for Boys, The University of Agriculture Peshawar, Peshawar, Pakistan
- Department of Botany, Islamia College Peshawar, Peshawar, Pakistan
| | - Fu Chen
- School of Public Administration, Hohai University, Nanjing, China
| | - Shafaqat Ali
- Department of Environmental Sciences and Engineering, Government College University, Faisalabad, Pakistan
- Department of Biological Science and Technology, China Medical University (CMU), Taichung City, Taiwan
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Alharbi K, Alhaithloul HAS, Alayafi AAM, Al-Taisan WA, Alghanem SM, Al-Mushhin AAM, Soliman MH, Alsubeie MS, Vodnar DC, Marc RA. Impact of Plantago ovata Forsk leaf extract on morpho-physio-biochemical attributes, ions uptake and drought resistance of wheat ( Triticum aestivum L.) seedlings. FRONTIERS IN PLANT SCIENCE 2022; 13:999170. [PMID: 36204080 PMCID: PMC9531683 DOI: 10.3389/fpls.2022.999170] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Accepted: 08/23/2022] [Indexed: 06/16/2023]
Abstract
The present study was conducted to examine the potential role of Plantago ovata Forsk leaf extract (POLE) which was applied at various concentration levels (control, hydropriming, 10, 20, 30, and 40% POLE) to the wheat (Triticum aestivum L.) seedlings. Drought stressed was applied at 60% osmotic potential (OM) to the T. aestivum seedlings to study various parameters such as growth and biomass, photosynthetic pigments and gas exchange characteristics, oxidative stress and response of various antioxidants and nutritional status of the plants. Various growth parameters such as gaseous exchange attributes, antioxidants and nutritional status of T. aestivum were investigated in this study. It was evident that drought-stressed condition had induced a negative impact on plant growth, photosynthetic pigment, gaseous exchange attributes, stomatal properties, and ion uptake by different organs (roots and shoots) of T. aestivum. The decrease in plant growth resulted from oxidative stress and overcome by the antioxidant (enzymatic and non-enzymatic) compounds, since their concentration increased in response to dehydration. Seed priming with POLE positively increased plant growth and photosynthesis, by decreasing oxidative stress indicators and increasing activities of antioxidant (enzymatic and non-enzymatic) compounds, compared to the plants which were grown without the application of POLE. Our results also depicted that optimum concentration of POLE for T. aestivum seedlings under drought condition was 20%, while further increase in POLE (30 and 40%) induced a non-significant (P < 0.05) effect on growth (shoot and root length) and biomass (fresh and dry weight) of T. aestivum seedling. Here we concluded that the understanding of the role of seed priming with POLE in the increment of growth profile, photosynthetic measurements and nutritional status introduces new possibilities for their effective use in drought-stressed condition and provides a promising strategy for T. aestivum tolerance against drought-stressed condition.
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Affiliation(s)
- Khadiga Alharbi
- Department of Biology, College of Science, Princess Nourah bint Abdulrahman University, Riyadh, Saudi Arabia
| | | | - Aisha A. M. Alayafi
- Biological Sciences Department, Faculty of Science, University of Jeddah, Jeddah, Saudi Arabia
| | - Wafa’a A. Al-Taisan
- Department of Biology, College of Science, Imam Abdulrahman Bin Fasial University, Dammam, Saudi Arabia
| | | | - Amina A. M. Al-Mushhin
- Department of Biology, College of Science and Humanities in Al-Kharj, Prince Sattam Bin Abdulaziz University, Al-Kharj, Saudi Arabia
| | - Mona H. Soliman
- Department of Botany and Microbiology, Faculty of Science, Cairo University, Giza, Egypt
- Department of Biology, Faculty of Science, Taibah University, Yanbu, Saudi Arabia
| | - Moodi Saham Alsubeie
- Department of Biology, College of Science, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh, Saudi Arabia
| | - Dan C. Vodnar
- Institute of Life Sciences, Faculty of Food Science and Technology, University of Agricultural Sciences and Veterinary Medicine, Cluj-Napoca, Romania
| | - Romina Alina Marc
- Department of Food Engineering, Faculty of Food Science and Technology, University of Agricultural Science and Veterinary Medicine Cluj-Napoca, Cluj-Napoca, Romania
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Faryal S, Ullah R, Khan MN, Ali B, Hafeez A, Jaremko M, Qureshi KA. Thiourea-Capped Nanoapatites Amplify Osmotic Stress Tolerance in Zea mays L. by Conserving Photosynthetic Pigments, Osmolytes Biosynthesis and Antioxidant Biosystems. Molecules 2022; 27:5744. [PMID: 36144480 PMCID: PMC9505401 DOI: 10.3390/molecules27185744] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 08/30/2022] [Accepted: 09/01/2022] [Indexed: 12/31/2022] Open
Abstract
Salinity is one of the most prevalent abiotic stresses which not only limits plant growth and yield, but also limits the quality of food products. This study was conducted on the surface functionalization of phosphorus-rich mineral apatite nanoparticles (ANPs), with thiourea as a source of nitrogen (TU-ANPs) and through a co-precipitation technique for inducing osmotic stress tolerance in Zea mays. The resulting thiourea-capped apatite nanostructure (TU-ANP) was characterized using complementary analytical techniques, such as EDX, SEM, XRD and IR spectroscopy. The pre-sowing of soaked seeds of Zea mays in 1.00 µg/mL, 5.00 µg/mL and 10 µg/mL of TU-ANPs yielded growth under 0 mM, 60 mM and 100 mM osmotic stress of NaCl. The results show that Ca and P salt acted as precursors for the synthesis of ANPs at an alkaline pH of 10-11. Thiourea as a source of nitrogen stabilized the ANPs' suspension medium, leading to the synthesis of TU-ANPs. XRD diffraction analysis validated the crystalline nature of TU-ANPs with lattice dimensions of 29 nm, calculated from FWHM using the Sherrer equation. SEM revealed spherical morphology with polydispersion in size distribution. EDS confirmed the presence of Ca and P at a characteristic KeV, whereas IR spectroscopy showed certain stretches of binding functional groups associated with TU-ANPs. Seed priming with TU-ANPs standardized germination indices (T50, MGT, GI and GP) which were significantly declined by NaCl-based osmotic stress. Maximum values for biochemical parameters, such as sugar (39.8 mg/g at 10 µg/mL), protein (139.8 mg/g at 10 µg/mL) and proline (74.1 mg/g at 10 µg/mL) were recorded at different applied doses of TU-ANP. Antioxidant biosystems in the form of EC 1.11.1.6 catalase (11.34 IU/g FW at 10 µg/mL), EC 1.11.1.11 APX (0.95 IU/G FW at 10 µg/mL), EC 1.15.1.1 SOD (1.42 IU/g FW at 5 µg/mL), EC 1.11.1.7 POD (0.43 IU/g FW at 5 µg/mL) were significantly restored under osmotic stress. Moreover, photosynthetic pigments, such as chlorophyll A (2.33 mg/g at 5 µg/mL), chlorophyll B (1.99 mg/g at 5 µg/mL) and carotenoids (2.52 mg/g at 10 µg/mL), were significantly amplified under osmotic stress via the application of TU-ANPs. Hence, the application of TU-ANPs restores the growth performance of plants subjected to induced osmotic stress.
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Affiliation(s)
- Sana Faryal
- Department of Chemical and Life Sciences, Qurtuba University of Science and Information Technology, Peshawar 25124, Pakistan
| | - Rehman Ullah
- Department of Botany, University of Peshawar, Peshawar 25120, Pakistan
| | | | - Baber Ali
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Aqsa Hafeez
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Mariusz Jaremko
- Smart-Health Initiative (SHI) and Red Sea Research Center (RSRC), Division of Biological and Environmental Sciences and Engineering (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal 23955, Saudi Arabia
| | - Kamal Ahmad Qureshi
- Department of Pharmaceutics, Unaizah College of Pharmacy, Qassim University, Unaizah 51911, Saudi Arabia
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