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Subeesh A, Chauhan N. Deep learning based abiotic crop stress assessment for precision agriculture: A comprehensive review. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2025; 381:125158. [PMID: 40203709 DOI: 10.1016/j.jenvman.2025.125158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2024] [Revised: 03/14/2025] [Accepted: 03/25/2025] [Indexed: 04/11/2025]
Abstract
Abiotic stresses are a leading cause of crop loss and a severe peril to global food security. Precise and prompt identification of abiotic stresses in crops is crucial for effective mitigation strategies. In recent years, Deep learning (DL) techniques have demonstrated remarkable promise for high-throughput crop stress phenotyping using remote sensing and field data. This study offers a comprehensive review of the applications of DL models like artificial neural networks (ANN), convolutional neural networks (CNN), recurrent neural networks (RNN), vision transformers (ViT), and other advanced deep learning architectures for abiotic crop stress assessment using different modalities like IoT sensor data, thermal, spectral, RGB with field, UAV and satellite based imagery. The study comprehensively analyses the abiotic stress conditions due to (a) water (b) nutrients (c) salinity (d) temperature and (e) heavy metal. Key contributions in the literature on stress classification, localization, and quantification using deep learning approaches are discussed in detail. The study also covers the principles of deep learning models, and their unique capabilities for handling complex, high-dimensional datasets inherent in abiotic crop stress assessment. The review also highlights important challenges and future directions in deep learning based abiotic crop stress assessment like limited labelled data, model interpretability, and interoperability for robust stress phenotyping. This study critically examines the research pertaining to the abiotic crop stress assessment, and provides a comprehensive view of the role deep learning plays in advancing abiotic crop stress assessment for data-driven precision agriculture.
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Affiliation(s)
- A Subeesh
- Department of Computer Science and Engineering, National Institute of Technology, Hamirpur, HP, 177005, India; Agricultural Mechanization Division, ICAR-Central Institute of Agricultural Engineering, Bhopal, 462038, MP, India.
| | - Naveen Chauhan
- Department of Computer Science and Engineering, National Institute of Technology, Hamirpur, HP, 177005, India.
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Xu H, Ran J, Chen M, Sui B, Bai X. Non-Destructive Testing Based on Hyperspectral Imaging for Determination of Available Silicon and Moisture Contents in Ginseng Soils of Different Origins. J Food Sci 2025; 90:e70285. [PMID: 40433951 DOI: 10.1111/1750-3841.70285] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2025] [Revised: 04/25/2025] [Accepted: 05/05/2025] [Indexed: 05/29/2025]
Abstract
Soil-available silicon (SAS) and soil moisture (SM) contents are critical parameters for crop growth; however, traditional detection methods are time-consuming and inefficient. This study aimed to develop a non-destructive testing method using hyperspectral imaging (HSI) technology for the rapid and real-time detection of SAS and SM in ginseng soils of various origins. Twenty-two batches of soil samples and 51 batches of ginseng samples were collected, and spectral data in the visible near-infrared (VNIR) and shortwave infrared (SWIR) ranges were acquired simultaneously using an HSI system. To reduce data redundancy, principal component analysis for variable dimensionality reduction and a genetic algorithm (GA) involving iterative and voting methods were employed to process spectral data. The results showed that for SAS, the raw ELM performed best (SWIR Rv 2 = 0.88, RMSE = 28.19), while BP-GA3 peaked after GA (SWIR Rv2 = 0.93, RMSE = 15.47). For SM, the raw BP (SWIR Rv 2 = 0.89, RMSE = 3.16), BP-GA3 achieved the highest GA result (SWIR Rv2 = 0.94, RMSE = 1.80). PCA consistently underperforms (lowest SAS PCA-ELM SWIR Rv 2 = 0.41). Combined PCA and SAM analysis revealed distinct ginseng classification by origin, with RF achieving 77.78% (test) and 100% (train) accuracy for soil in SWIR, while BP model yielded 73.33% (test) and 80.56% (train) accuracy for ginseng in VNIR, demonstrating effective differentiation. This study provides theoretical support and a practical basis for the non-destructive testing of ginseng soil from the three provinces of Northeast China based on hyperspectral imaging; however, further expansion of the studied research samples is required to verify the generalization ability of the developed model.
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Affiliation(s)
- Hui Xu
- Northeast Asia Research Institute of Traditional Chinese Medicine, Changchun University of Chinese Medicine, Changchun, Jilin, China
| | - Jing Ran
- Northeast Asia Research Institute of Traditional Chinese Medicine, Changchun University of Chinese Medicine, Changchun, Jilin, China
| | - Meixin Chen
- Northeast Asia Research Institute of Traditional Chinese Medicine, Changchun University of Chinese Medicine, Changchun, Jilin, China
| | - Bowen Sui
- Northeast Asia Research Institute of Traditional Chinese Medicine, Changchun University of Chinese Medicine, Changchun, Jilin, China
| | - XueYuan Bai
- Northeast Asia Research Institute of Traditional Chinese Medicine, Changchun University of Chinese Medicine, Changchun, Jilin, China
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Luo Z, Deng M, Tang M, Liu R, Feng S, Zhang C, Zheng Z. Estimating soil profile salinity under vegetation cover based on UAV multi-source remote sensing. Sci Rep 2025; 15:2713. [PMID: 39837880 PMCID: PMC11751408 DOI: 10.1038/s41598-024-82868-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2024] [Accepted: 12/09/2024] [Indexed: 01/23/2025] Open
Abstract
Soil salinization is the most prevalent form of land degradation in arid, semi-arid, and coastal regions of China, posing significant challenges to local crop yield, economic development, and environmental sustainability. However, limited research exists on estimating soil salinity at different depths under vegetation cover. This study employed field-controlled soil experiments to collect multi-source remote sensing data on soil salt content (SSC) at varying depths beneath barley growth. Three types of feature variables were derived from the images and filtered using the boosting decision tree (BDT) method. In addition, four machine learning algorithms coupled with seven variable combination groups were applied to establish comprehensively soil salinity estimation models. The performances of estimation model for different crop coverage ratios and soil depth were then evaluated. The results showed that the gaussian process regression (GPR) model, based on the whole variable group for depths of 0 ~ 10 cm and 30 ~ 40 cm, outperformed other models, achieving validation R2 values of 0.774 and 0.705, with RMSE values are 0.185% and 0.31%, respectively. For depths of 10 ~ 20 cm and 20 ~ 30 cm, the random forest (RF) models, incorporating spectral index and texture data, demonstrated superior accuracy with R2 values of 0.666 and 0.714. The study confirms that SSC can be quantitatively estimated at various depths using the machine learning model based on multi-source remote sensing, providing a valuable approach for monitoring soil salinization.
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Affiliation(s)
- Zhenhai Luo
- College of Hydraulic Science and Engineering, Yangzhou University, Yangzhou, 225009, China
| | - Meihua Deng
- College of Hydraulic Science and Engineering, Yangzhou University, Yangzhou, 225009, China
| | - Min Tang
- College of Hydraulic Science and Engineering, Yangzhou University, Yangzhou, 225009, China
| | - Rui Liu
- College of Hydraulic Science and Engineering, Yangzhou University, Yangzhou, 225009, China
| | - Shaoyuan Feng
- College of Hydraulic Science and Engineering, Yangzhou University, Yangzhou, 225009, China.
| | - Chao Zhang
- College of Hydraulic Science and Engineering, Yangzhou University, Yangzhou, 225009, China.
| | - Zhen Zheng
- Research Center of Fluid Machinery Engineering and Technology, Jiangsu University, Zhenjiang, 212013, China
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Ma H, Zhao W, Duan W, Ma F, Li C, Li Z. Inversion model of soil salinity in alfalfa covered farmland based on sensitive variable selection and machine learning algorithms. PeerJ 2024; 12:e18186. [PMID: 39346075 PMCID: PMC11439395 DOI: 10.7717/peerj.18186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2024] [Accepted: 09/05/2024] [Indexed: 10/01/2024] Open
Abstract
Purpose Timely and accurate monitoring of soil salinity content (SSC) is essential for precise irrigation management of large-scale farmland. Uncrewed aerial vehicle (UAV) low-altitude remote sensing with high spatial and temporal resolution provides a scientific and effective technical means for SSC monitoring. Many existing soil salinity inversion models have only been tested by a single variable selection method or machine learning algorithm, and the influence of variable selection method combined with machine learning algorithm on the accuracy of soil salinity inversion remain further studied. Methods Firstly, based on UAV multispectral remote sensing data, by extracting the spectral reflectance of each sampling point to construct 30 spectral indexes, and using the pearson correlation coefficient (PCC), gray relational analysis (GRA), variable projection importance (VIP), and support vector machine-recursive feature elimination (SVM-RFE) to screen spectral index and realize the selection of sensitive variables. Subsequently, screened and unscreened variables as model input independent variables, constructed 20 soil salinity inversion models based on the support vector machine regression (SVM), back propagation neural network (BPNN), extreme learning machine (ELM), and random forest (RF) machine learning algorithms, the aim is to explore the feasibility of different variable selection methods combined with machine learning algorithms in SSC inversion of crop-covered farmland. To evaluate the performance of the soil salinity inversion model, the determination coefficient (R2), root mean square error (RMSE) and performance deviation ratio (RPD) were used to evaluate the model performance, and determined the best variable selection method and soil salinity inversion model by taking alfalfa covered farmland in arid oasis irrigation areas of China as the research object. Results The variable selection combined with machine learning algorithm can significantly improve the accuracy of remote sensing inversion of soil salinity. The performance of the models has been improved markedly using the four variable selection methods, and the applicability varied among the four methods, the GRA variable selection method is suitable for SVM, BPNN, and ELM modeling, while the PCC method is suitable for RF modeling. The GRA-SVM is the best soil salinity inversion model in alfalfa cover farmland, with Rv 2 of 0.8888, RMSEv of 0.1780, and RPD of 1.8115 based on the model verification dataset, and the spatial distribution map of soil salinity can truly reflect the degree of soil salinization in the study area. Conclusion Based on our findings, the variable selection combined with machine learning algorithm is an effective method to improve the accuracy of soil salinity remote sensing inversion, which provides a new approach for timely and accurate acquisition of crops covered farmland soil salinity information.
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Affiliation(s)
- Hong Ma
- College of Energy and Power Engineering, Lanzhou University of Technology, Lanzhou, China
- JiuQuan Vocational Technical College, JiuQuan, China
- Ministry of Agriculture and Rural Affairs Smart Agriculture Irrigation Equipment Key Laboratory, Lanzhou, China
| | - Wenju Zhao
- College of Energy and Power Engineering, Lanzhou University of Technology, Lanzhou, China
- Ministry of Agriculture and Rural Affairs Smart Agriculture Irrigation Equipment Key Laboratory, Lanzhou, China
| | - Weicheng Duan
- College of Energy and Power Engineering, Lanzhou University of Technology, Lanzhou, China
- Ministry of Agriculture and Rural Affairs Smart Agriculture Irrigation Equipment Key Laboratory, Lanzhou, China
| | - Fangfang Ma
- College of Energy and Power Engineering, Lanzhou University of Technology, Lanzhou, China
- Ministry of Agriculture and Rural Affairs Smart Agriculture Irrigation Equipment Key Laboratory, Lanzhou, China
| | - Congcong Li
- College of Energy and Power Engineering, Lanzhou University of Technology, Lanzhou, China
- Ministry of Agriculture and Rural Affairs Smart Agriculture Irrigation Equipment Key Laboratory, Lanzhou, China
| | - Zongli Li
- General Institute for Water Resources and Hydropower Planning and Design, Ministry of Water Resources, Beijing, China
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Liu X, Guo P, Xu Q, Du W. Cotton seed cultivar identification based on the fusion of spectral and textural features. PLoS One 2024; 19:e0303219. [PMID: 38805455 PMCID: PMC11132500 DOI: 10.1371/journal.pone.0303219] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2023] [Accepted: 04/21/2024] [Indexed: 05/30/2024] Open
Abstract
The mixing of cotton seeds of different cultivars and qualities can lead to differences in growth conditions and make field management difficult. In particular, except for yield loss, it can also lead to inconsistent cotton quality and poor textile product quality, causing huge economic losses to farmers and the cotton processing industry. However, traditional cultivar identification methods for cotton seeds are time-consuming, labor-intensive, and cumbersome, which cannot meet the needs of modern agriculture and modern cotton processing industry. Therefore, there is an urgent need for a fast, accurate, and non-destructive method for identifying cotton seed cultivars. In this study, hyperspectral images (397.32 nm-1003.58 nm) of five cotton cultivars, namely Jinke 20, Jinke 21, Xinluzao 64, Xinluzao 74, and Zhongmiansuo 5, were captured using a Specim IQ camera, and then the average spectral information of seeds of each cultivar was used for spectral analysis, aiming to estab-lish a cotton seed cultivar identification model. Due to the presence of many obvious noises in the < 400 nm and > 1000 nm regions of the collected spectral data, spectra from 400 nm to 1000 nm were selected as the representative spectra of the seed samples. Then, various denoising techniques, including Savitzky-Golay (SG), Standard Normal Variate (SNV), and First Derivative (FD), were applied individually and in combination to improve the quality of the spectra. Additionally, a successive projections algorithm (SPA) was employed for spectral feature selection. Based on the full-band spectra, a Partial Least Squares-Discriminant Analysis (PLS-DA) model was established. Furthermore, spectral features and textural features were fused to create Random Forest (RF), Convolutional Neural Network (CNN), and Extreme Learning Machine (ELM) identification models. The results showed that: (1) The SNV-FD preprocessing method showed the optimal denoising performance. (2) SPA highlighted the near-infrared region (800-1000 nm), red region (620-700 nm), and blue-green region (420-570 nm) for identifying cotton cultivar. (3) The fusion of spectral features and textural features did not consistently improve the accuracy of all modeling strategies, suggesting the need for further research on appropriate modeling strategies. (4) The ELM model had the highest cotton cultivar identification accuracy, with an accuracy of 100% for the training set and 98.89% for the test set. In conclusion, this study successfully developed a highly accurate cotton seed cultivar identification model (ELM model). This study provides a new method for the rapid and non-destructive identification of cotton seed cultivars, which will help ensure the cultivar consistency of seeds used in cotton planting, and improve the overall quality and yield of cotton.
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Affiliation(s)
- Xiao Liu
- College of Sciences, Shihezi University, Shihezi, China
| | - Peng Guo
- College of Sciences, Shihezi University, Shihezi, China
| | - Quan Xu
- China Geological Survey Urumqi Comprehensive Survey Center on Natural Resources, Urumqi, China
| | - Wenling Du
- College of Sciences, Shihezi University, Shihezi, China
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Uddin MJ, Sherrell J, Emami A, Khaleghian M. Application of Artificial Intelligence and Sensor Fusion for Soil Organic Matter Prediction. SENSORS (BASEL, SWITZERLAND) 2024; 24:2357. [PMID: 38610568 PMCID: PMC11014143 DOI: 10.3390/s24072357] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Revised: 03/11/2024] [Accepted: 04/04/2024] [Indexed: 04/14/2024]
Abstract
Soil organic matter (SOM) is one of the best indicators to assess soil health and understand soil productivity and fertility. Therefore, measuring SOM content is a fundamental practice in soil science and agricultural research. The traditional approach (oven-dry) of measuring SOM is a costly, arduous, and time-consuming process. However, the integration of cutting-edge technology can significantly aid in the prediction of SOM, presenting a promising alternative to traditional methods. In this study, we tested the hypothesis that an accurate estimate of SOM might be obtained by combining the ground-based sensor-captured soil parameters and soil analysis data along with drone images of the farm. The data are gathered using three different methods: ground-based sensors detect soil parameters such as temperature, pH, humidity, nitrogen, phosphorous, and potassium of the soil; aerial photos taken by UAVs display the vegetative index (NDVI); and the Haney test of soil analysis reports measured in a lab from collected samples. Our datasets combined the soil parameters collected using ground-based sensors, soil analysis reports, and NDVI content of farms to perform the data analysis to predict SOM using different machine learning algorithms. We incorporated regression and ANOVA for analyzing the dataset and explored seven different machine learning algorithms, such as linear regression, Ridge regression, Lasso regression, random forest regression, Elastic Net regression, support vector machine, and Stochastic Gradient Descent regression to predict the soil organic matter content using other parameters as predictors.
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Affiliation(s)
| | | | - Anahita Emami
- College of Science and Engineering, Texas State University, San Marcos, TX 78666, USA; (M.J.U.); (J.S.)
| | - Meysam Khaleghian
- College of Science and Engineering, Texas State University, San Marcos, TX 78666, USA; (M.J.U.); (J.S.)
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Song Q, Gao X, Song Y, Li Q, Chen Z, Li R, Zhang H, Cai S. Estimation and mapping of soil texture content based on unmanned aerial vehicle hyperspectral imaging. Sci Rep 2023; 13:14097. [PMID: 37644047 PMCID: PMC10465580 DOI: 10.1038/s41598-023-40384-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Accepted: 08/09/2023] [Indexed: 08/31/2023] Open
Abstract
Soil texture is one of the important physical and natural properties of soil. Much of the current research focuses on soil texture monitoring using non-imaging geophysical spectrometers. However there are fewer studies utilizing unmanned aerial vehicle (UAV) hyperspectral data for soil texture monitoring. UAV mounted hyperspectral cameras can be used for quickly and accurately obtaining high-resolution spatial information of soil texture. A foundation has been laid for the realization of rapid soil texture surveys using unmanned airborne hyperspectral data without field sampling. This study selected three typical farmland areas in Huangshui Basin of Qinghai as the study area, and a total of 296 soil samples were collected. Data calibration of UAV spectra using laboratory spectra and field in situ spectra to explore the feasibility of applying laboratory soil texture models directly to field conditions. This results show that UAV hyperspectral imagery combined with machine learning can obtain a set of ideal processing methods. The pre-processing of the spectral data can obtain high accuracy of soil texture estimation and good mapping effect. The results of this study can provide effective technical support and decision-making assistance for future agricultural land planning on the Tibetan Plateau. The main innovation of this study is to establish a set of processing procedures and methods applicable to UAV hyperspectral imagery to provide data reference for monitoring soil texture in agricultural fields on the Tibetan Plateau.
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Affiliation(s)
- Qi Song
- School of Geographical Sciences, Qinghai Normal University, Xining, 810008, China
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, Xining, 810008, China
- Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Xining, 810008, China
| | - Xiaohong Gao
- School of Geographical Sciences, Qinghai Normal University, Xining, 810008, China.
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, Xining, 810008, China.
- Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Xining, 810008, China.
- Academy of Plateau Science and Sustainability, Xining, 810008, China.
| | - Yuting Song
- School of Geographical Sciences, Qinghai Normal University, Xining, 810008, China
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, Xining, 810008, China
- Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Xining, 810008, China
| | - Qiaoli Li
- School of Geographical Sciences, Qinghai Normal University, Xining, 810008, China
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, Xining, 810008, China
- Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Xining, 810008, China
| | - Zhen Chen
- School of Geographical Sciences, Qinghai Normal University, Xining, 810008, China
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, Xining, 810008, China
- Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Xining, 810008, China
| | - Runxiang Li
- School of Geographical Sciences, Qinghai Normal University, Xining, 810008, China
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, Xining, 810008, China
- Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Xining, 810008, China
| | - Hao Zhang
- School of Geographical Sciences, Qinghai Normal University, Xining, 810008, China
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, Xining, 810008, China
- Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Xining, 810008, China
| | - Sangjie Cai
- School of Geographical Sciences, Qinghai Normal University, Xining, 810008, China
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, Xining, 810008, China
- Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Ministry of Education Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Xining, 810008, China
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Zhang Y, Wei L, Lu Q, Zhong Y, Yuan Z, Wang Z, Li Z, Yang Y. Mapping soil available copper content in the mine tailings pond with combined simulated annealing deep neural network and UAV hyperspectral images. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 320:120962. [PMID: 36621716 DOI: 10.1016/j.envpol.2022.120962] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Revised: 12/15/2022] [Accepted: 12/26/2022] [Indexed: 06/17/2023]
Abstract
Improper discharge of slag from mining will pollute the surrounding soil, thereby affecting the ecology and becoming an important global problem. The available copper (ACu) content in polluted soil is an important factor affecting plant growth and development. When investigating a large area of soil with ACu, manual sampling by points and inspection are mainly used, due to the heterogeneity of soil, the efficiency and accuracy are lower. The Unmanned aerial vehicle (UAV) equipped with a hyperspectral sensor as a remote sensing technology is widely used in soil indicator monitoring because of its rapid and convenience. Meanwhile, using the relationship between soil organic matter and available copper has the potential to predict available copper. In this study, we selected the study area with tailings area in the Jianghan Plain of China and used a UAV equipped with a hyperspectral sensor to predict ACu and soil organic matter (SOM) in the soil with two datasets. Firstly, 74 soil samples were collected in the study area, and the ACu and SOM of the soil samples were determined. Second, a hyperspectral image of the study area is obtained using a UAV equipped with a hyperspectral sensor. Thirdly, we combine hyperspectral data with competitive adaptive reweighted sampling (CARS) to obtain feature bands and utilize simulated annealing deep neural network (SA-DNN) to generate estimation models. Finally, maps of the distribution of ACu and SOM in the area were generated using the model. In two datasets, the model of ACu with R2 values both are 0.89, and R2 on the model of SOM is 0.89 and 0.88. The results show that the combination of UAV hyperspectral imagery with the SA-DNN model has good performance in the prediction of organic matter and available copper, which is helpful for soil environmental monitoring.
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Affiliation(s)
- Yangxi Zhang
- Faculty of Resources and Environmental Science, Hubei University, Wuhan 430062, China; Hubei Key Laboratory of Regional Development and Environmental Response, Hubei University, Wuhan 430062, China
| | - Lifei Wei
- Faculty of Resources and Environmental Science, Hubei University, Wuhan 430062, China; Hubei Key Laboratory of Regional Development and Environmental Response, Hubei University, Wuhan 430062, China.
| | - Qikai Lu
- Faculty of Resources and Environmental Science, Hubei University, Wuhan 430062, China; Hubei Key Laboratory of Regional Development and Environmental Response, Hubei University, Wuhan 430062, China
| | - Yanfei Zhong
- State Key Laboratory of Information Engineering in Surveying, Mapping and Remote Sensing, Wuhan University, Wuhan 430079, China
| | - Ziran Yuan
- Faculty of Resources and Environmental Science, Hubei University, Wuhan 430062, China; State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Zhengxiang Wang
- Faculty of Resources and Environmental Science, Hubei University, Wuhan 430062, China; Hubei Key Laboratory of Regional Development and Environmental Response, Hubei University, Wuhan 430062, China
| | - Zhongqiang Li
- Faculty of Resources and Environmental Science, Hubei University, Wuhan 430062, China; Hubei Key Laboratory of Regional Development and Environmental Response, Hubei University, Wuhan 430062, China
| | - Yujing Yang
- Faculty of Resources and Environmental Science, Hubei University, Wuhan 430062, China; Hubei Key Laboratory of Regional Development and Environmental Response, Hubei University, Wuhan 430062, China
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Datta D, Paul M, Murshed M, Teng SW, Schmidtke L. Soil Moisture, Organic Carbon, and Nitrogen Content Prediction with Hyperspectral Data Using Regression Models. SENSORS (BASEL, SWITZERLAND) 2022; 22:7998. [PMID: 36298349 PMCID: PMC9609775 DOI: 10.3390/s22207998] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 10/14/2022] [Accepted: 10/17/2022] [Indexed: 06/16/2023]
Abstract
Soil moisture, soil organic carbon, and nitrogen content prediction are considered significant fields of study as they are directly related to plant health and food production. Direct estimation of these soil properties with traditional methods, for example, the oven-drying technique and chemical analysis, is a time and resource-consuming approach and can predict only smaller areas. With the significant development of remote sensing and hyperspectral (HS) imaging technologies, soil moisture, carbon, and nitrogen can be estimated over vast areas. This paper presents a generalized approach to predicting three different essential soil contents using a comprehensive study of various machine learning (ML) models by considering the dimensional reduction in feature spaces. In this study, we have used three popular benchmark HS datasets captured in Germany and Sweden. The efficacy of different ML algorithms is evaluated to predict soil content, and significant improvement is obtained when a specific range of bands is selected. The performance of ML models is further improved by applying principal component analysis (PCA), a dimensional reduction method that works with an unsupervised learning method. The effect of soil temperature on soil moisture prediction is evaluated in this study, and the results show that when the soil temperature is considered with the HS band, the soil moisture prediction accuracy does not improve. However, the combined effect of band selection and feature transformation using PCA significantly enhances the prediction accuracy for soil moisture, carbon, and nitrogen content. This study represents a comprehensive analysis of a wide range of established ML regression models using data preprocessing, effective band selection, and data dimension reduction and attempt to understand which feature combinations provide the best accuracy. The outcomes of several ML models are verified with validation techniques and the best- and worst-case scenarios in terms of soil content are noted. The proposed approach outperforms existing estimation techniques.
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Affiliation(s)
- Dristi Datta
- School of Computing, Mathematics, and Engineering, Charles Sturt University, Bathurst, NSW 2795, Australia
| | - Manoranjan Paul
- School of Computing, Mathematics, and Engineering, Charles Sturt University, Bathurst, NSW 2795, Australia
| | - Manzur Murshed
- Centre for Smart Analytics, Federation University Australia, Berwick, VIC 3806, Australia
| | - Shyh Wei Teng
- Institute of Innovation, Science and Sustainability, Federation University Australia, Berwick, VIC 3806, Australia
| | - Leigh Schmidtke
- Gulbali Institue, Charles Sturt University, Wagga Wagga, NSW 2650, Australia
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Arjoune Y, Sugunaraj N, Peri S, Nair SV, Skurdal A, Ranganathan P, Johnson B. Soybean cyst nematode detection and management: a review. PLANT METHODS 2022; 18:110. [PMID: 36071455 PMCID: PMC9450454 DOI: 10.1186/s13007-022-00933-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 08/04/2022] [Indexed: 06/15/2023]
Abstract
Soybeans play a key role in global food security. U.S. soybean yields, which comprise [Formula: see text] of the total soybeans planted in the world, continue to experience unprecedented grain loss due to the soybean cyst nematode (SCN) plant pathogen. SCN remains one of the primary disruptive pests despite the existence of advanced management techniques such as crop rotation and SCN-resistant varieties. SCN detection is a key step in managing this disease; however, early detection is challenging because soybeans do not show any above ground symptoms unless they are significantly damaged. Direct soil sampling remains the most common method for SCN detection, however, this method has several problems. For example, the threshold damage methods-adopted by most of the laboratories to make recommendations-is not reliable as it does not consider soil pH, N, P, and K values and relies solely on the egg count instead of assessment of the root infection. To overcome the challenges of manual soil sampling methods, deep learning and hyperspectral imaging are important current topics in precision agriculture for plant disease detection and have been proposed as cost-effective and efficient detection methods that can work at scale. We have reviewed more than 150 research papers focusing on soybean cyst nematodes with an emphasis on deep learning techniques for detection and management. First: we describe soybean vegetation and reproduction stages, SCN life cycles, and factors influencing this disease. Second: we highlight the impact of SCN on soybean yield loss and the challenges associated with its detection. Third: we describe direct sampling methods in which the soil samples are procured and analyzed to evaluate SCN egg counts. Fourth: we highlight the advantages and limitations of these direct methods, then review computer vision- and remote sensing-based detection methods: data collection using ground, aerial, and satellite approaches followed by a review of machine learning methods for image analysis-based soybean cyst nematode detection. We highlight the evaluation approaches and the advantages of overall detection workflow in high-performance and big data environments. Lastly, we discuss various management approaches, such as crop rotation, fertilization, SCN resistant varieties such as PI 88788, and SCN's increasing resistance to these strategies. We review machine learning approaches for soybean crop yield forecasting as well as the influence of pesticides, herbicides, and fertilizers on SCN infestation reduction. We provide recommendations for soybean research using deep learning and hyperspectral imaging to accommodate the lack of the ground truth data and training and testing methodologies, such as data augmentation and transfer learning, to achieve a high level of detection accuracy while keeping costs as low as possible.
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Affiliation(s)
- Youness Arjoune
- School of Electrical Engineering and Computer Science (SEECS), University of North Dakota, Grand Forks, USA
| | - Niroop Sugunaraj
- School of Electrical Engineering and Computer Science (SEECS), University of North Dakota, Grand Forks, USA
| | - Sai Peri
- School of Electrical Engineering and Computer Science (SEECS), University of North Dakota, Grand Forks, USA
| | - Sreejith V. Nair
- Department of Aviation, University of North Dakota, Grand Forks, USA
| | - Anton Skurdal
- School of Electrical Engineering and Computer Science (SEECS), University of North Dakota, Grand Forks, USA
| | - Prakash Ranganathan
- School of Electrical Engineering and Computer Science (SEECS), University of North Dakota, Grand Forks, USA
| | - Burton Johnson
- Plant Sciences, North Dakota State University, Fargo, USA
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11
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Robakowska M, Ślęzak D, Żuratyński P, Tyrańska-Fobke A, Robakowski P, Prędkiewicz P, Zorena K. Possibilities of Using UAVs in Pre-Hospital Security for Medical Emergencies. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:10754. [PMID: 36078469 PMCID: PMC9518096 DOI: 10.3390/ijerph191710754] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 08/25/2022] [Accepted: 08/27/2022] [Indexed: 06/15/2023]
Abstract
The term unmanned aerial vehicle (UAV) was post-applied in the 1980s to describe remotely piloted multi-purpose, unmanned, autonomous aircraft. The terms unmanned aircraft systems with data terminal connectivity (UAS) and remotely piloted aircraft systems (RPV, RPAS-military systems) are also used. This review aims to analyze the feasibility of using UAVs to support emergency medical systems in the supply and urgent care ranges. The implementation of drones in the medical security system requires proper planning of service cooperation, division of the area into sectors, assessment of potential risks and opportunities, and legal framework for the application. A systematic literature search was conducted to assess the applicability based on published scientific papers on possible medical drone applications in the field of urgent mode. The widespread applications of UAVs in healthcare are concerned with logistics, scope, and transportability, with framework legal constraints to effectively exploit opportunities for improving population health, particularly for costly critical situations.
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Affiliation(s)
- Marlena Robakowska
- Department of Public Health & Social Medicine, Medical University of Gdańsk, 80-210 Gdansk, Poland
| | - Daniel Ślęzak
- Division of Medical Rescue, Faculty of Health Sciences with the Institute of Maritime and Tropical Medicine, Medical University of Gdańsk, 80-210 Gdansk, Poland
| | - Przemysław Żuratyński
- Division of Medical Rescue, Faculty of Health Sciences with the Institute of Maritime and Tropical Medicine, Medical University of Gdańsk, 80-210 Gdansk, Poland
- Department of Anesthesiology and Intensive Care, Oncology Center—Memorial Hospital in Bydgoszcz, 85-796 Bydgoszcz, Poland
| | - Anna Tyrańska-Fobke
- Department of Public Health & Social Medicine, Medical University of Gdańsk, 80-210 Gdansk, Poland
| | - Piotr Robakowski
- Division of Medical Rescue, Faculty of Health Sciences with the Institute of Maritime and Tropical Medicine, Medical University of Gdańsk, 80-210 Gdansk, Poland
| | - Paweł Prędkiewicz
- Department of Finance, Faculty of Economics and Finance, Wrocław University of Economics, 53-345 Wroclaw, Poland
| | - Katarzyna Zorena
- Department of Immunobiology and Environmental Microbiology, Medical University of Gdansk, 80-211 Gdansk, Poland
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12
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Nguyen TT, Ngo HH, Guo W, Chang SW, Nguyen DD, Nguyen CT, Zhang J, Liang S, Bui XT, Hoang NB. A low-cost approach for soil moisture prediction using multi-sensor data and machine learning algorithm. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 833:155066. [PMID: 35398433 DOI: 10.1016/j.scitotenv.2022.155066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Revised: 03/30/2022] [Accepted: 04/02/2022] [Indexed: 06/14/2023]
Abstract
A high-resolution soil moisture prediction method has recently gained its importance in various fields such as forestry, agricultural and land management. However, accurate, robust and non- cost prohibitive spatially monitoring of soil moisture is challenging. In this research, a new approach involving the use of advance machine learning (ML) models, and multi-sensor data fusion including Sentinel-1(S1) C-band dual polarimetric synthetic aperture radar (SAR), Sentinel-2 (S2) multispectral data, and ALOS Global Digital Surface Model (ALOS DSM) to predict precisely soil moisture at 10 m spatial resolution across research areas in Australia. The total of 52 predictor variables generated from S1, S2 and ALOS DSM data fusion, including vegetation indices, soil indices, water index, SAR transformation indices, ALOS DSM derived indices like digital model elevation (DEM), slope, and topographic wetness index (TWI). The field soil data from Western Australia was employed. The performance capability of extreme gradient boosting regression (XGBR) together with the genetic algorithm (GA) optimizer for features selection and optimization for soil moisture prediction in bare lands was examined and compared with various scenarios and ML models. The proposed model (the XGBR-GA model) with 21 optimal features obtained from GA was yielded the highest performance (R2 = 0. 891; RMSE = 0.875%) compared to random forest regression (RFR), support vector machine (SVM), and CatBoost gradient boosting regression (CBR). Conclusively, the new approach using the XGBR-GA with features from combination of reliable free-of-charge remotely sensed data from Sentinel and ALOS imagery can effectively estimate the spatial variability of soil moisture. The described framework can further support precision agriculture and drought resilience programs via water use efficiency and smart irrigation management for crop production.
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Affiliation(s)
- Thu Thuy Nguyen
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, Sydney, NSW 2007, Australia
| | - Huu Hao Ngo
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, Sydney, NSW 2007, Australia.
| | - Wenshan Guo
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, Sydney, NSW 2007, Australia
| | - Soon Woong Chang
- Department of Environmental Energy Engineering, Kyonggi University, 442-760, Republic of Korea
| | - Dinh Duc Nguyen
- Department of Environmental Energy Engineering, Kyonggi University, 442-760, Republic of Korea
| | - Chi Trung Nguyen
- Faculty of Science, Agriculture, Business and Law, UNE Business School, University of New England, Elm Avenue, Armidale, NSW 2351, Australia
| | - Jian Zhang
- School of Environmental Science and Engineering, Shandong University, Qingdao 266237, China
| | - Shuang Liang
- School of Environmental Science and Engineering, Shandong University, Qingdao 266237, China
| | - Xuan Thanh Bui
- Key Laboratory of Advanced Waste Treatment Technology & Faculty of Environment and Natural Resources, Ho Chi Minh City University of Technology (HCMUT), Vietnam National University Ho Chi Minh (VNU-HCM), Ho Chi Minh City 700000, Viet Nam
| | - Ngoc Bich Hoang
- NTT Institute of Hi-Technology, Nguyen Tat Thanh University, Ho Chi Minh City, Viet Nam
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In-Season Monitoring of Maize Leaf Water Content Using Ground-Based and UAV-Based Hyperspectral Data. SUSTAINABILITY 2022. [DOI: 10.3390/su14159039] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
China is one the largest maize (Zea mays L.) producer worldwide. Considering water deficit as one of the most important limiting factors for crop yield stability, remote sensing technology has been successfully used to monitor water relations in the soil–plant–atmosphere system through canopy and leaf reflectance, contributing to the better management of water under precision agriculture practices and the quantification of dynamic traits. This research was aimed to evaluate the relation between maize leaf water content (LWC) and ground-based and unoccupied aerial vehicle (UAV)-based hyperspectral data using the following approaches: (I) single wavelengths, (II) broadband reflectance and vegetation indices, (III) optimum hyperspectral vegetation indices (HVIs), and (IV) partial least squares regression (PLSR). A field experiment was undertaken at the Chinese Academy of Agricultural Sciences, Beijing, China, during the 2020 cropping season following a split plot model in a randomized complete block design with three blocks. Three maize varieties were subjected to three differential irrigation schedules. Leaf-based reflectance (400–2500 nm) was measured with a FieldSpec 4 spectroradiometer, and canopy-based reflectance (400–1000 nm) was collected with a Pika-L hyperspectral camera mounted on a UAV at three assessment days. Both sensors demonstrated similar shapes in the spectral response from the leaves and canopy, with differences in reflectance intensity across near-infrared wavelengths. Ground-based hyperspectral data outperformed UAV-based data for LWC monitoring, especially when using the full spectra (Vis–NIR–SWIR). The HVI and the PLSR models were demonstrated to be more suitable for LWC monitoring, with a higher HVI accuracy. The optimal band combinations for HVI were centered between 628 and 824 nm (R2 from 0.28 to 0.49) using the UAV-based sensor and were consistently located around 1431–1464 nm and 2115–2331 nm (R2 from 0.59 to 0.80) using the ground-based sensor on the three assessment days. The obtained results indicate the potential for the complementary use of ground-based and UAV-based hyperspectral data for maize LWC monitoring.
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Combination of Hyperspectral and Machine Learning to Invert Soil Electrical Conductivity. REMOTE SENSING 2022. [DOI: 10.3390/rs14112602] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
An accurate estimation of soil electrical conductivity (EC) using hyperspectral techniques is of great significance for understanding the spatial distribution of solutes and soil salinization. Although spectral transformation has been widely used in data pre-processing, the performance of different pre-processing techniques (or combination methods) on different models of the same data set is still ambiguous. Moreover, extremely randomized trees (ERT) and light gradient boosting machine (LightGBM) models are new learning algorithms with good generalization performance (soil moisture and above-ground biomass), but are less studied in estimating soil salinity in the visible and near-infrared spectra. In this study, 130 soil EC data, soil measured hyperspectral data, topographic factors, conventional salinity indices such as Salinity Index 1, and two-band (2D) salinity indices such as ratio indices, were introduced. The five spectral pre-processing methods of standard normal variate (SNV), standard normal variate and detrend (SNV-DT), inverse (1/OR) (OR is original spectrum), inverse-log (Log(1/OR) and fractional order derivative (FOD) (range 0–2, with intervals of 0.25) were performed. A gradient boosting machine (GBM) was used to select sensitive spectral parameters. Models (extreme gradient boosting (XGBoost), LightGBM, random forest (RF), ERT, classification and regression tree (CART), and ridge regression (RR)) were used for inversion soil EC and model validation. The results reveal that the two-dimensional correlation coefficient highlighted EC more effectively than the one-dimensional. Under SNV and the second order derivative, the two-dimensional correlation coefficient increased by 0.286 and 0.258 compared to the one-dimension, respectively. The 13 characteristic factors of slope, NDI, SI-T, RI, profile curvature, DOA, plane curvature, SI (conventional), elevation, Int2, aspect, S1 and TWI provided 90% of the cumulative importance for EC using GBM. Among the six machine models, the ERT model performed the best for simulation (R2 = 0.98) and validation (R2 = 0.96). The ERT model showed the best performance among the EC estimation models from the reference data. The kriging map based on the ERT simulation showed a close relationship with the measured data. Our study selected the effective pre-processing methods (SNV and the 2 order derivative) using one- and two-dimensional correlation, 13 important factors and the ERT model for EC hyperspectral inversion. This provides a theoretical support for the quantitative monitoring of soil salinization on a larger scale using remote sensing techniques.
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The Potential of Optical UAS Data for Predicting Surface Soil Moisture in a Peatland across Time and Sites. REMOTE SENSING 2022. [DOI: 10.3390/rs14102334] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Advances in unmanned aerial systems (UASs) have increased the potential of remote sensing to overcome scale issues for soil moisture (SM) quantification. Regardless, optical imagery is acquired using various sensors and platforms, resulting in simpler operations for management purposes. In this respect, we predicted SM at 10 cm depth using partial least squares regression (PLSR) models based on optical UAS data and assessed the potential of this framework to provide accurate predictions across dates and sites. For this, we evaluated models’ performance using several datasets and the contribution of spectral and photogrammetric predictors on the explanation of SM. The results indicated that our models predicted SM at comparable accuracies as other methods relying on more expensive and complex sensors; the best R2 was 0.73, and the root-mean-squared error (RMSE) was 13.1%. Environmental conditions affected the predictive importance of different metrics; photogrammetric-based metrics were relevant over exposed surfaces, while spectral predictors were proxies of water stress status over homogeneous vegetation. However, the models demonstrated limited applicability across times and locations, particularly in highly heterogeneous conditions. Overall, our findings indicated that integrating UAS imagery and PLSR modelling is suitable for retrieving SM measures, offering an improved method for short-term monitoring tasks.
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16
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Unmanned Aerial Vehicle (UAV) Remote Sensing in Grassland Ecosystem Monitoring: A Systematic Review. REMOTE SENSING 2022. [DOI: 10.3390/rs14051096] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
In recent years, the application of unmanned aerial vehicle (UAV) remote sensing in grassland ecosystem monitoring has increased, and the application directions have diversified. However, there have been few research reviews specifically for grassland ecosystems at present. Therefore, it is necessary to systematically and comprehensively summarize the application of UAV remote sensing in grassland ecosystem monitoring. In this paper, we first analyzed the application trend of UAV remote sensing in grassland ecosystem monitoring and introduced common UAV platforms and remote sensing sensors. Then, the application scenarios of UAV remote sensing in grassland ecosystem monitoring were reviewed from five aspects: grassland vegetation monitoring, grassland animal surveys, soil physical and chemical monitoring, grassland degradation monitoring and environmental disturbance monitoring. Finally, the current limitations and future development directions were summarized. The results will be helpful to improve the understanding of the application scenarios of UAV remote sensing in grassland ecosystem monitoring and to provide a scientific reference for ecological remote sensing research.
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Prediction of Soil Water Content and Electrical Conductivity using Random Forest Methods with UAV Multispectral and Ground-coupled Geophysical Data. REMOTE SENSING 2022. [DOI: 10.3390/rs14041023] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
The volumetric water content (VWC) of soil is a critical parameter in agriculture, as VWC strongly influences crop yield, provides nutrients to plants, and maintains the microbes that are needed for the biological health of the soil. Measuring VWC is difficult, as it is spatially and temporally heterogeneous, and most agricultural producers use point measurements that cannot fully capture this parameter. Electrical conductivity (EC) is another soil parameter that is useful in agriculture, since it can be used to indicate soil salinity, soil texture, and plant nutrient availability. Soil EC is also very heterogeneous; measuring EC using conventional soil sampling techniques is very time consuming and often fails to capture the variability in EC at a site. In contrast to the point-based methods used to measure VWC and EC, multispectral data acquired with unmanned aerial vehicles (UAV) can cover large areas with high resolution. In agriculture, multispectral data are often used to calculate vegetation indices (VIs). In this research UAV-acquired VIs and raw multispectral data were used to predict soil VWC and EC. High-resolution geophysical methods were used to acquire more than 41,000 measurements of VWC and 8,000 measurements of EC in 18 traverses across a field that contained 56 experimental plots. The plots varied by crop type (corn, soybeans, and alfalfa) and drainage (no drainage, moderate drainage, high drainage). Machine learning was performed using the random forest method to predict VWC and EC using VIs and multispectral data. Prediction accuracy was determined for several scenarios that assumed different levels of knowledge about crop type or drainage. Results showed that multispectral data improved prediction of VWC and EC, and the best predictions occurred when both the crop type and degree of drainage were known, but drainage was a more important input than crop type. Predictions were most accurate in drier soil, which may be due to the lower overall variability of VWC and EC under these conditions. An analysis of which multispectral data were most important showed that NDRE, VARI, and blue band data improved predictions the most. The final conclusions of this study are that inexpensive UAV-based multispectral data can be used to improve estimation of heterogenous soil properties, such as VWC and EC in active agricultural fields. In this study, the best estimates of these properties were obtained when the agriculture parameters in a field were fairly homogeneous (one crop type and the same type of drainage throughout the field), although improvements were observed even when these conditions were not met. The multispectral data that were most useful for prediction were those that penetrated deeper into the soil canopy or were sensitive to bare soil.
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Evaluation of Total Nitrogen in Water via Airborne Hyperspectral Data: Potential of Fractional Order Discretization Algorithm and Discrete Wavelet Transform Analysis. REMOTE SENSING 2021. [DOI: 10.3390/rs13224643] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Controlling and managing surface source pollution depends on the rapid monitoring of total nitrogen in water. However, the complex factors affecting water quality (plant shading and suspended matter in water) make direct estimation extremely challenging. Considering the spectral response mechanisms of emergent plants, we coupled discrete wavelet transform (DWT) and fractional order discretization (FOD) techniques with three machine learning models (random forest (RF), bagging algorithm (bagging), and eXtreme Gradient Boosting (XGBoost)) to mine this potential spectral information. A total of 567 models were developed, and airborne hyperspectral data processed with various DWT scales and FOD techniques were compared. The effective information in the hyperspectral reflectance data were better emphasized after DWT processing. After DWT processing the original spectrum (OR), its sensitivity to TN in water was maximally improved by 0.22, and the correlation between FOD and TN in water was optimally increased by 0.57. The transformed spectral information enhanced the TN model accuracy, especially for FOD after DWT. For RF, 82% of the model R2 values improved by 0.02~0.72 compared to the model using FOD spectra; 78.8% of the bagging values improved by 0.01~0.53 and 65.0% of the XGBoost values improved by 0.01~0.64. The XGBoost model with DWT coupled with grey relation analysis (GRA) yielded the best estimation accuracy, with the highest precision of R2 = 0.91 for L6. In conclusion, appropriately scaled DWT analysis can substantially improve the accuracy of extracting TN from UAV hyperspectral images. These outcomes may facilitate the further development of accurate water quality monitoring in sophisticated global waters from drone or satellite hyperspectral data.
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Boost Precision Agriculture with Unmanned Aerial Vehicle Remote Sensing and Edge Intelligence: A Survey. REMOTE SENSING 2021. [DOI: 10.3390/rs13214387] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
In recent years unmanned aerial vehicles (UAVs) have emerged as a popular and cost-effective technology to capture high spatial and temporal resolution remote sensing (RS) images for a wide range of precision agriculture applications, which can help reduce costs and environmental impacts by providing detailed agricultural information to optimize field practices. Furthermore, deep learning (DL) has been successfully applied in agricultural applications such as weed detection, crop pest and disease detection, etc. as an intelligent tool. However, most DL-based methods place high computation, memory and network demands on resources. Cloud computing can increase processing efficiency with high scalability and low cost, but results in high latency and great pressure on the network bandwidth. The emerging of edge intelligence, although still in the early stages, provides a promising solution for artificial intelligence (AI) applications on intelligent edge devices at the edge of the network close to data sources. These devices are with built-in processors enabling onboard analytics or AI (e.g., UAVs and Internet of Things gateways). Therefore, in this paper, a comprehensive survey on the latest developments of precision agriculture with UAV RS and edge intelligence is conducted for the first time. The major insights observed are as follows: (a) in terms of UAV systems, small or light, fixed-wing or industrial rotor-wing UAVs are widely used in precision agriculture; (b) sensors on UAVs can provide multi-source datasets, and there are only a few public UAV dataset for intelligent precision agriculture, mainly from RGB sensors and a few from multispectral and hyperspectral sensors; (c) DL-based UAV RS methods can be categorized into classification, object detection and segmentation tasks, and convolutional neural network and recurrent neural network are the mostly common used network architectures; (d) cloud computing is a common solution to UAV RS data processing, while edge computing brings the computing close to data sources; (e) edge intelligence is the convergence of artificial intelligence and edge computing, in which model compression especially parameter pruning and quantization is the most important and widely used technique at present, and typical edge resources include central processing units, graphics processing units and field programmable gate arrays.
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Soft Computing Techniques for Appraisal of Potentially Toxic Elements from Jalandhar (Punjab), India. APPLIED SCIENCES-BASEL 2021. [DOI: 10.3390/app11188362] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
The contamination of potentially toxic elements (PTEs) in agricultural soils is a serious concern around the globe, and modelling approaches is imperative in order to determine the possible hazards linked with PTEs. These techniques accurately assess the PTEs in soil, which play a pivotal role in eliminating the weaknesses in determining PTEs in soils. This paper aims to predict the concentration of Cu, Co and Pb using neural networks (NNs) based on multilayer perceptron (MLP) and boosted regression trees (BT). Statistical performance estimation factors were rummage-sale to measure the performance of developed models. Comparison of the coefficient of correlation and root mean squared error suggest that MLP-established models perform better than BT-based models for predicting the concentration of Cu and Pb, whereas BT models perform better than MLP established models at predicting the concentration of Co.
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Sensitive Feature Evaluation for Soil Moisture Retrieval Based on Multi-Source Remote Sensing Data with Few In-Situ Measurements: A Case Study of the Continental U.S. WATER 2021. [DOI: 10.3390/w13152003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Soil moisture (SM) plays an important role for understanding Earth’s land and near-surface atmosphere interactions. Existing studies rarely considered using multi-source data and their sensitiveness to SM retrieval with few in-situ measurements. To solve this issue, we designed a SM retrieval method (Multi-MDA-RF) using random forest (RF) based on 29 features derived from passive microwave remote sensing data, optical remote sensing data, land surface models (LSMs), and other auxiliary data. To evaluate the importance of different features to SM retrieval, we first compared 10 filter or embedded type feature selection methods with sequential forward selection (SFS). Then, RF was employed to establish a nonlinear relationship between the in-situ SM measurements from sparse network stations and the optimal feature subset. The experiments were conducted in the continental U.S. (CONUS) using in-situ measurements during August 2015, with only 5225 training samples covering the selected feature subset. The experimental results show that mean decrease accuracy (MDA) is better than other feature selection methods, and Multi-MDA-RF outperforms the back-propagation neural network (BPNN) and generalized regression neural network (GRNN), with the R and unbiased root-mean-square error (ubRMSE) values being 0.93 and 0.032 cm3/cm3, respectively. In comparison with other SM products, Multi-MDA-RF is more accurate and can well capture the SM spatial dynamics.
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Bhoi A, Nayak RP, Bhoi SK, Sethi S, Panda SK, Sahoo KS, Nayyar A. IoT-IIRS: Internet of Things based intelligent-irrigation recommendation system using machine learning approach for efficient water usage. PeerJ Comput Sci 2021; 7:e578. [PMID: 34239972 PMCID: PMC8237332 DOI: 10.7717/peerj-cs.578] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2020] [Accepted: 05/13/2021] [Indexed: 06/13/2023]
Abstract
In the traditional irrigation process, a huge amount of water consumption is required which leads to water wastage. To reduce the wasting of water for this tedious task, an intelligent irrigation system is urgently needed. The era of machine learning (ML) and the Internet of Things (IoT) brings it is a great advantage of building an intelligent system that performs this task automatically with minimal human effort. In this study, an IoT enabled ML-trained recommendation system is proposed for efficient water usage with the nominal intervention of farmers. IoT devices are deployed in the crop field to precisely collect the ground and environmental details. The gathered data are forwarded and stored in a cloud-based server, which applies ML approaches to analyze data and suggest irrigation to the farmer. To make the system robust and adaptive, an inbuilt feedback mechanism is added to this recommendation system. The experimentation, reveals that the proposed system performs quite well on our own collected dataset and National Institute of Technology (NIT) Raipur crop dataset.
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Affiliation(s)
- Ashutosh Bhoi
- Department of Computer Science and Engineering, Government College of Engineering (Govt.), Kalahandi, India
| | - Rajendra Prasad Nayak
- Department of Computer Science and Engineering, Government College of Engineering (Govt.), Kalahandi, India
| | - Sourav Kumar Bhoi
- Department of Computer Science and Engineering, Parala Maharaja Engineering College (Govt.), Berhampur, India
| | - Srinivas Sethi
- Department of Computer Science Engineering and Applications, Indira Gandhi Institute of Technology (Govt.), Sarang, India
| | - Sanjaya Kumar Panda
- Department of Computer Science and Engineering, National Institute of Technology (NIT), Warangal, India
| | - Kshira Sagar Sahoo
- Department of Computer Science and Engineering, SRM University, Amaravati, Andhra Pradesh, India
| | - Anand Nayyar
- Graduate School; Faculty of Information Technology, Duy Tan University, Da Nang, Viet Nam
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Sarkar S, Ramsey AF, Cazenave AB, Balota M. Peanut Leaf Wilting Estimation From RGB Color Indices and Logistic Models. FRONTIERS IN PLANT SCIENCE 2021; 12:658621. [PMID: 34220885 PMCID: PMC8253229 DOI: 10.3389/fpls.2021.658621] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/26/2021] [Accepted: 03/30/2021] [Indexed: 06/13/2023]
Abstract
Peanut (Arachis hypogaea L.) is an important crop for United States agriculture and worldwide. Low soil moisture is a major constraint for production in all peanut growing regions with negative effects on yield quantity and quality. Leaf wilting is a visual symptom of low moisture stress used in breeding to improve stress tolerance, but visual rating is slow when thousands of breeding lines are evaluated and can be subject to personnel scoring bias. Photogrammetry might be used instead. The objective of this article is to determine if color space indices derived from red-green-blue (RGB) images can accurately estimate leaf wilting for breeding selection and irrigation triggering in peanut production. RGB images were collected with a digital camera proximally and aerially by a unmanned aerial vehicle during 2018 and 2019. Visual rating was performed on the same days as image collection. Vegetation indices were intensity, hue, saturation, lightness, a∗, b∗, u∗, v∗, green area (GA), greener area (GGA), and crop senescence index (CSI). In particular, hue, a∗, u∗, GA, GGA, and CSI were significantly (p ≤ 0.0001) associated with leaf wilting. These indices were further used to train an ordinal logistic regression model for wilting estimation. This model had 90% accuracy when images were taken aerially and 99% when images were taken proximally. This article reports on a simple yet key aspect of peanut screening for tolerance to low soil moisture stress and uses novel, fast, cost-effective, and accurate RGB-derived models to estimate leaf wilting.
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Affiliation(s)
- Sayantan Sarkar
- School of Plant and Environmental Sciences, Virginia Tech, Tidewater AREC, Suffolk, VA, United States
| | - A. Ford Ramsey
- Department of Agricultural and Applied Economics, Virginia Tech, Blacksburg, VA, United States
| | - Alexandre-Brice Cazenave
- School of Plant and Environmental Sciences, Virginia Tech, Tidewater AREC, Suffolk, VA, United States
| | - Maria Balota
- School of Plant and Environmental Sciences, Virginia Tech, Tidewater AREC, Suffolk, VA, United States
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Yang X, Bao N, Li W, Liu S, Fu Y, Mao Y. Soil Nutrient Estimation and Mapping in Farmland Based on UAV Imaging Spectrometry. SENSORS 2021; 21:s21113919. [PMID: 34204160 PMCID: PMC8201019 DOI: 10.3390/s21113919] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/19/2021] [Revised: 05/27/2021] [Accepted: 06/04/2021] [Indexed: 12/19/2022]
Abstract
Soil nutrient is one of the most important properties for improving farmland quality and product. Imaging spectrometry has the potential for rapid acquisition and real-time monitoring of soil characteristics. This study aims to explore the preprocessing and modeling methods of hyperspectral images obtained from an unmanned aerial vehicle (UAV) platform for estimating the soil organic matter (SOM) and soil total nitrogen (STN) in farmland. The results showed that: (1) Multiplicative Scattering Correction (MSC) performed better in reducing image scattering noise than Standard Normal Variate (SNV) transformation or spectral derivatives, and it yielded a result with higher correlation and lower signal-to-noise ratio; (2) The proposed feature selection method combining Successive Projections Algorithm (SPA) and Competitive Adaptive Reweighted Sampling algorithm (CARS), could provide selective preference for hyperspectral bands. Exploiting this method, 24 and 22 feature bands were selected for SOM and STN estimation, respectively; (3) The particle swarm optimization (PSO) algorithm was employed to obtain optimized input weights and bias values of the extreme learning machine (ELM) model for more accurate prediction of SOM and STN. The improved PSO-ELM model based on the selected preference bands achieved higher prediction accuracy (R2 of 0.73 and RPD of 1.91 for SOM, R2 of 0.63, and RPD of 1.53 for STN) than support vector machine (SVM), partial least squares regression (PLSR), and the ELM model. This study provides an important guideline for monitoring soil nutrient for precision agriculture with imaging spectrometry.
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Affiliation(s)
- Xiaoyu Yang
- College of Resources and Civil Engineering, Northeastern University, Shenyang 110819, China; (X.Y.); (S.L.); (Y.M.)
| | - Nisha Bao
- College of Resources and Civil Engineering, Northeastern University, Shenyang 110819, China; (X.Y.); (S.L.); (Y.M.)
- Correspondence:
| | - Wenwen Li
- School of Geographical Sciences and Urban Planning, Arizona State University, Tempe, AZ 85287, USA;
| | - Shanjun Liu
- College of Resources and Civil Engineering, Northeastern University, Shenyang 110819, China; (X.Y.); (S.L.); (Y.M.)
| | - Yanhua Fu
- JangHo Architecture College, Northeastern University, Shenyang 110169, China;
| | - Yachun Mao
- College of Resources and Civil Engineering, Northeastern University, Shenyang 110819, China; (X.Y.); (S.L.); (Y.M.)
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Benos L, Tagarakis AC, Dolias G, Berruto R, Kateris D, Bochtis D. Machine Learning in Agriculture: A Comprehensive Updated Review. SENSORS (BASEL, SWITZERLAND) 2021; 21:3758. [PMID: 34071553 PMCID: PMC8198852 DOI: 10.3390/s21113758] [Citation(s) in RCA: 86] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Revised: 05/21/2021] [Accepted: 05/24/2021] [Indexed: 01/05/2023]
Abstract
The digital transformation of agriculture has evolved various aspects of management into artificial intelligent systems for the sake of making value from the ever-increasing data originated from numerous sources. A subset of artificial intelligence, namely machine learning, has a considerable potential to handle numerous challenges in the establishment of knowledge-based farming systems. The present study aims at shedding light on machine learning in agriculture by thoroughly reviewing the recent scholarly literature based on keywords' combinations of "machine learning" along with "crop management", "water management", "soil management", and "livestock management", and in accordance with PRISMA guidelines. Only journal papers were considered eligible that were published within 2018-2020. The results indicated that this topic pertains to different disciplines that favour convergence research at the international level. Furthermore, crop management was observed to be at the centre of attention. A plethora of machine learning algorithms were used, with those belonging to Artificial Neural Networks being more efficient. In addition, maize and wheat as well as cattle and sheep were the most investigated crops and animals, respectively. Finally, a variety of sensors, attached on satellites and unmanned ground and aerial vehicles, have been utilized as a means of getting reliable input data for the data analyses. It is anticipated that this study will constitute a beneficial guide to all stakeholders towards enhancing awareness of the potential advantages of using machine learning in agriculture and contributing to a more systematic research on this topic.
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Affiliation(s)
- Lefteris Benos
- Centre of Research and Technology-Hellas (CERTH), Institute for Bio-Economy and Agri-Technology (IBO), 6th km Charilaou-Thermi Rd, GR 57001 Thessaloniki, Greece; (L.B.); (A.C.T.); (G.D.); (D.K.)
| | - Aristotelis C. Tagarakis
- Centre of Research and Technology-Hellas (CERTH), Institute for Bio-Economy and Agri-Technology (IBO), 6th km Charilaou-Thermi Rd, GR 57001 Thessaloniki, Greece; (L.B.); (A.C.T.); (G.D.); (D.K.)
| | - Georgios Dolias
- Centre of Research and Technology-Hellas (CERTH), Institute for Bio-Economy and Agri-Technology (IBO), 6th km Charilaou-Thermi Rd, GR 57001 Thessaloniki, Greece; (L.B.); (A.C.T.); (G.D.); (D.K.)
| | - Remigio Berruto
- Department of Agriculture, Forestry and Food Science (DISAFA), University of Turin, Largo Braccini 2, 10095 Grugliasco, Italy;
| | - Dimitrios Kateris
- Centre of Research and Technology-Hellas (CERTH), Institute for Bio-Economy and Agri-Technology (IBO), 6th km Charilaou-Thermi Rd, GR 57001 Thessaloniki, Greece; (L.B.); (A.C.T.); (G.D.); (D.K.)
| | - Dionysis Bochtis
- Centre of Research and Technology-Hellas (CERTH), Institute for Bio-Economy and Agri-Technology (IBO), 6th km Charilaou-Thermi Rd, GR 57001 Thessaloniki, Greece; (L.B.); (A.C.T.); (G.D.); (D.K.)
- FarmB Digital Agriculture P.C., Doiranis 17, GR 54639 Thessaloniki, Greece
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Estimating Agricultural Soil Moisture Content through UAV-Based Hyperspectral Images in the Arid Region. REMOTE SENSING 2021. [DOI: 10.3390/rs13081562] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Unmanned aerial vehicle (UAV)-based hyperspectral remote sensing is an important monitoring technology for the soil moisture content (SMC) of agroecological systems in arid regions. This technology develops precision farming and agricultural informatization. However, hyperspectral data are generally used in data mining. In this study, UAV-based hyperspectral imaging data with a resolution o 4 cm and totaling 70 soil samples (0–10 cm) were collected from farmland (2.5 × 104 m2) near Fukang City, Xinjiang Uygur Autonomous Region, China. Four estimation strategies were tested: the original image (strategy I), first- and second-order derivative methods (strategy II), the fractional-order derivative (FOD) technique (strategy III), and the optimal fractional order combined with the optimal multiband indices (strategy IV). These strategies were based on the eXtreme Gradient Boost (XGBoost) algorithm, with the aim of building the best estimation model for agricultural SMC in arid regions. The results demonstrated that FOD technology could effectively mine information (with an absolute maximum correlation coefficient of 0.768). By comparison, strategy IV yielded the best estimates out of the methods tested (R2val = 0.921, RMSEP = 1.943, and RPD = 2.736) for the SMC. The model derived from the order of 0.4 within strategy IV worked relatively well among the different derivative methods (strategy I, II, and III). In conclusion, the combination of FOD technology and the optimal multiband indices generated a highly accurate model within the XGBoost algorithm for SMC estimation. This research provided a promising data mining approach for UAV-based hyperspectral imaging data.
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Predicting Water Stress in Wild Blueberry Fields Using Airborne Visible and Near Infrared Imaging Spectroscopy. REMOTE SENSING 2021. [DOI: 10.3390/rs13081425] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
Water management and irrigation practices are persistent challenges for many agricultural systems, exacerbated by changing seasonal and weather patterns. The wild blueberry industry is at heightened susceptibility due to its unique growing conditions and uncultivated nature. Stress detection in agricultural fields can prompt management responses to mitigate detrimental conditions, including drought and disease. We assessed airborne spectral data accompanied by ground sampled water potential over three developmental stages of wild blueberries collected throughout the 2019 summer on two adjacent fields, one irrigated and one non-irrigated. Ground sampled leaves were collected in tandem to the hyperspectral image collection with an unoccupied aerial vehicle (UAV) and then measured for leaf water potential. Using methods in machine learning and statistical analysis, we developed models to determine irrigation status and water potential. Seven models were assessed in this study, with four used to process six hyperspectral cube images for analysis. These images were classified as irrigated or non-irrigated and estimated for water potential levels, resulting in an R2 of 0.62 and verified with a validation dataset. Further investigation relating imaging spectroscopy and water potential will be beneficial in understanding the dynamics between the two for future studies.
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Sassu A, Gambella F, Ghiani L, Mercenaro L, Caria M, Pazzona AL. Advances in Unmanned Aerial System Remote Sensing for Precision Viticulture. SENSORS (BASEL, SWITZERLAND) 2021; 21:956. [PMID: 33535445 PMCID: PMC7867093 DOI: 10.3390/s21030956] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 12/04/2020] [Revised: 01/27/2021] [Accepted: 01/28/2021] [Indexed: 11/17/2022]
Abstract
New technologies for management, monitoring, and control of spatio-temporal crop variability in precision viticulture scenarios are numerous. Remote sensing relies on sensors able to provide useful data for the improvement of management efficiency and the optimization of inputs. unmanned aerial systems (UASs) are the newest and most versatile tools, characterized by high precision and accuracy, flexibility, and low operating costs. The work aims at providing a complete overview of the application of UASs in precision viticulture, focusing on the different application purposes, the applied equipment, the potential of technologies combined with UASs for identifying vineyards' variability. The review discusses the potential of UASs in viticulture by distinguishing five areas of application: rows segmentation and crop features detection techniques; vineyard variability monitoring; estimation of row area and volume; disease detection; vigor and prescription maps creation. Technological innovation and low purchase costs make UASs the core tools for decision support in the customary use by winegrowers. The ability of the systems to respond to the current demands for the acquisition of digital technologies in agricultural fields makes UASs a candidate to play an increasingly important role in future scenarios of viticulture application.
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Affiliation(s)
| | - Filippo Gambella
- Department of Agriculture, University of Sassari, Viale Italia 39, 07100 Sassari, Italy; (A.S.); (L.G.); (L.M.); (M.C.); (A.L.P.)
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29
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Fahey T, Pham H, Gardi A, Sabatini R, Stefanelli D, Goodwin I, Lamb DW. Active and Passive Electro-Optical Sensors for Health Assessment in Food Crops. SENSORS (BASEL, SWITZERLAND) 2020; 21:E171. [PMID: 33383831 PMCID: PMC7795220 DOI: 10.3390/s21010171] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/06/2020] [Revised: 12/23/2020] [Accepted: 12/24/2020] [Indexed: 11/26/2022]
Abstract
In agriculture, early detection of plant stresses is advantageous in preventing crop yield losses. Remote sensors are increasingly being utilized for crop health monitoring, offering non-destructive, spatialized detection and the quantification of plant diseases at various levels of measurement. Advances in sensor technologies have promoted the development of novel techniques for precision agriculture. As in situ techniques are surpassed by multispectral imaging, refinement of hyperspectral imaging and the promising emergence of light detection and ranging (LIDAR), remote sensing will define the future of biotic and abiotic plant stress detection, crop yield estimation and product quality. The added value of LIDAR-based systems stems from their greater flexibility in capturing data, high rate of data delivery and suitability for a high level of automation while overcoming the shortcomings of passive systems limited by atmospheric conditions, changes in light, viewing angle and canopy structure. In particular, a multi-sensor systems approach and associated data fusion techniques (i.e., blending LIDAR with existing electro-optical sensors) offer increased accuracy in plant disease detection by focusing on traditional optimal estimation and the adoption of artificial intelligence techniques for spatially and temporally distributed big data. When applied across different platforms (handheld, ground-based, airborne, ground/aerial robotic vehicles or satellites), these electro-optical sensors offer new avenues to predict and react to plant stress and disease. This review examines the key sensor characteristics, platform integration options and data analysis techniques recently proposed in the field of precision agriculture and highlights the key challenges and benefits of each concept towards informing future research in this very important and rapidly growing field.
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Affiliation(s)
- Thomas Fahey
- School of Engineering, RMIT University, Melbourne, VIC 3000, Australia; (T.F.); (H.P.); (A.G.)
- Food Agility CRC Ltd., 81 Broadway, Melbourne, NSW 2007, Australia; (D.S.); (I.G.); (D.W.L.)
| | - Hai Pham
- School of Engineering, RMIT University, Melbourne, VIC 3000, Australia; (T.F.); (H.P.); (A.G.)
| | - Alessandro Gardi
- School of Engineering, RMIT University, Melbourne, VIC 3000, Australia; (T.F.); (H.P.); (A.G.)
- Food Agility CRC Ltd., 81 Broadway, Melbourne, NSW 2007, Australia; (D.S.); (I.G.); (D.W.L.)
| | - Roberto Sabatini
- School of Engineering, RMIT University, Melbourne, VIC 3000, Australia; (T.F.); (H.P.); (A.G.)
- Food Agility CRC Ltd., 81 Broadway, Melbourne, NSW 2007, Australia; (D.S.); (I.G.); (D.W.L.)
| | - Dario Stefanelli
- Food Agility CRC Ltd., 81 Broadway, Melbourne, NSW 2007, Australia; (D.S.); (I.G.); (D.W.L.)
- Manjimup Centre, Department of Primary Industries and Regional Development, Western Australia, Private Bag 7, Manjimup, WA 6258, Australia
| | - Ian Goodwin
- Food Agility CRC Ltd., 81 Broadway, Melbourne, NSW 2007, Australia; (D.S.); (I.G.); (D.W.L.)
- Agriculture Victoria, Tatura, VIC 3616, Australia
| | - David William Lamb
- Food Agility CRC Ltd., 81 Broadway, Melbourne, NSW 2007, Australia; (D.S.); (I.G.); (D.W.L.)
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Possibility of Zhuhai-1 Hyperspectral Imagery for Monitoring Salinized Soil Moisture Content Using Fractional Order Differentially Optimized Spectral Indices. WATER 2020. [DOI: 10.3390/w12123360] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The possibility of quantitative inversion of salinized soil moisture content (SMC) from Zhuhai-1 hyperspectral imagery and the application effect of fractional order differentially optimized spectral indices were discussed, which provided new research ideas for improving the accuracy of hyperspectral remote sensing inversion. The hyperspectral data from indoor and Zhuhai-1 remote sensing imagery were resampled to the same spectral scale. The soil hyperspectral data were processed by fractional order differential preprocessing method and optimized spectral indices method, and the Pearson correlation coefficient (PCC/r) analysis was made with SMC data. The sensitive optimized spectral indices were used to establish the ground hyperspectral estimation model, and a variety of modeling methods were used to select the best SMC inversion model. The results were as follows: the maximum one-dimensional r between SMC and the 466–938 nm band was −0.635, the maximum one-dimensional r with the 0.5-order absorbance spectrum was 0.665, and the maximum two-dimensional r with the difference index (DI) calculated by the 0.5-order absorbance spectrum was ±0.72. The maximum three-dimensional r with the triangle vegetation index (TVI) calculated from the 0.5-order absorbance spectrum reached 0.755, which exceeded the one-dimensional r extreme value of 400–2400 nm. The TreeNet gradient boosting machine (TGBM) regression model had the highest modeling accuracy, with a calibration coefficient of determination (R2C) = 0.887, calibration root mean square error (RMSEC) = 2.488%, standard deviation (SD) = 6.733%, and r = 0.942. However, the partial least squares regression (PLSR) model had the strongest predictive ability, with validation coefficient of determination (R2V) = 0.787, validation root mean square error (RMSEV) = 3.247%, and relative prediction deviation (RPD) = 2.071. The variable importance in projection (VIP) method could not only improve model efficiency but also increased model accuracy. R2C of the optimal PLSR model was 0.733, RMSEC was 3.028%, R2V was 0.805, RMSEV was 3.100%, RPD was 1.976, and Akaike information criterion (AIC) was 151.050. The three-band optimized spectral indices with fractional differential pretreatment could to a certain extent break through the limitation of visible near-infrared spectrum in SMC estimation due to the lack of shortwave infrared spectra, which made it possible to quantitatively retrieve saline SMC on the basis of Zhuhai-1 hyperspectral imagery.
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Wang J, Shi T, Yu D, Teng D, Ge X, Zhang Z, Yang X, Wang H, Wu G. Ensemble machine-learning-based framework for estimating total nitrogen concentration in water using drone-borne hyperspectral imagery of emergent plants: A case study in an arid oasis, NW China. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2020; 266:115412. [PMID: 32836049 DOI: 10.1016/j.envpol.2020.115412] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2020] [Revised: 07/17/2020] [Accepted: 08/08/2020] [Indexed: 05/12/2023]
Abstract
In arid and semi-arid regions, water-quality problems are crucial to local social demand and human well-being. However, the conventional remote sensing-based direct detection of water quality parameters, especially using spectral reflectance of water, must satisfy certain preconditions (e.g., flat water surface and ideal radiation geometry). In this study, we hypothesized that drone-borne hyperspectral imagery of emergent plants could be better applied to retrieval total nitrogen (TN) concentration in water regardless of preconditions possibly due to the spectral responses of emergent plants on nitrogen removal and water purification. To test this hypothesis, a total of 200 groups of bootstrap samples were used to examine the relationship between the extracted TN concentrations from the drone-borne hyperspectral imagery of emergent plants and the experimentally measured TN concentrations in Ebinur Lake Oasis using four machine learning (ML) models (Partial Least Squares (PLS), Random Forest (RF), Extreme Learning Machine (ELM), and Gaussian Process (GP)). Through the introduction of the fractional order derivative (FOD), we build a decision-level fusion (DLF) model to minimize the regression results' biases of individual ML models. For individual ML model, GP performed the best. Still, the amount of uncertainty in individual ML models renders their performance to be subpar. The introduction of the DLF model greatly minimizes the regression results' biases. The DLF model allows to reduce potential uncertainties without sacrificing accuracy. In conclusion, the spectral response caused by nitrogen removal and water purification on emergent plants could be used to retrieve TN concentration in water with a DLF model framework. Our study offers a new perspective and a basic scientific support for water quality monitoring in arid regions.
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Affiliation(s)
- Jingzhe Wang
- MNR Key Laboratory for Geo-Environmental Monitoring of Great Bay Area & Guangdong Key Laboratory of Urban Informatics & Shenzhen Key Laboratory of Spatial Smart Sensing and Services, Shenzhen University, Shenzhen, 518060, China; College of Life Sciences and Oceanography, Shenzhen University, 518060, Shenzhen, China
| | - Tiezhu Shi
- MNR Key Laboratory for Geo-Environmental Monitoring of Great Bay Area & Guangdong Key Laboratory of Urban Informatics & Shenzhen Key Laboratory of Spatial Smart Sensing and Services, Shenzhen University, Shenzhen, 518060, China; School of Architecture & Urban Planning, Shenzhen University, 518060, Shenzhen, China.
| | - Danlin Yu
- School of Sociology and Population Studies, Renmin University of China, Beijing, 100872, China; Department of Earth and Environmental Studies, Montclair State University, Montclair, NJ, 07043, USA
| | - Dexiong Teng
- College of Resources and Environment Science, Xinjiang University, Urumqi, 800046, China
| | - Xiangyu Ge
- College of Resources and Environment Science, Xinjiang University, Urumqi, 800046, China
| | - Zipeng Zhang
- College of Resources and Environment Science, Xinjiang University, Urumqi, 800046, China
| | - Xiaodong Yang
- Department of Geography & Spatial Information Technology, Ningbo University, Ningbo, 315211, China
| | - Hanxi Wang
- School of Environment, Northeast Normal University, Changchun, 130117, China
| | - Guofeng Wu
- MNR Key Laboratory for Geo-Environmental Monitoring of Great Bay Area & Guangdong Key Laboratory of Urban Informatics & Shenzhen Key Laboratory of Spatial Smart Sensing and Services, Shenzhen University, Shenzhen, 518060, China; School of Architecture & Urban Planning, Shenzhen University, 518060, Shenzhen, China
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32
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Meta-analysis of Unmanned Aerial Vehicle (UAV) Imagery for Agro-environmental Monitoring Using Machine Learning and Statistical Models. REMOTE SENSING 2020. [DOI: 10.3390/rs12213511] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Unmanned Aerial Vehicle (UAV) imaging systems have recently gained significant attention from researchers and practitioners as a cost-effective means for agro-environmental applications. In particular, machine learning algorithms have been applied to UAV-based remote sensing data for enhancing the UAV capabilities of various applications. This systematic review was performed on studies through a statistical meta-analysis of UAV applications along with machine learning algorithms in agro-environmental monitoring. For this purpose, a total number of 163 peer-reviewed articles published in 13 high-impact remote sensing journals over the past 20 years were reviewed focusing on several features, including study area, application, sensor type, platform type, and spatial resolution. The meta-analysis revealed that 62% and 38% of the studies applied regression and classification models, respectively. Visible sensor technology was the most frequently used sensor with the highest overall accuracy among classification articles. Regarding regression models, linear regression and random forest were the most frequently applied models in UAV remote sensing imagery processing. Finally, the results of this study confirm that applying machine learning approaches on UAV imagery produces fast and reliable results. Agriculture, forestry, and grassland mapping were found as the top three UAV applications in this review, in 42%, 22%, and 8% of the studies, respectively.
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Guo Y, Wang H, Wu Z, Wang S, Sun H, Senthilnath J, Wang J, Robin Bryant C, Fu Y. Modified Red Blue Vegetation Index for Chlorophyll Estimation and Yield Prediction of Maize from Visible Images Captured by UAV. SENSORS (BASEL, SWITZERLAND) 2020; 20:E5055. [PMID: 32899582 PMCID: PMC7570511 DOI: 10.3390/s20185055] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/28/2020] [Revised: 08/30/2020] [Accepted: 09/02/2020] [Indexed: 11/22/2022]
Abstract
The vegetation index (VI) has been successfully used to monitor the growth and to predict the yield of agricultural crops. In this paper, a long-term observation was conducted for the yield prediction of maize using an unmanned aerial vehicle (UAV) and estimations of chlorophyll contents using SPAD-502. A new vegetation index termed as modified red blue VI (MRBVI) was developed to monitor the growth and to predict the yields of maize by establishing relationships between MRBVI- and SPAD-502-based chlorophyll contents. The coefficients of determination (R2s) were 0.462 and 0.570 in chlorophyll contents' estimations and yield predictions using MRBVI, and the results were relatively better than the results from the seven other commonly used VI approaches. All VIs during the different growth stages of maize were calculated and compared with the measured values of chlorophyll contents directly, and the relative error (RE) of MRBVI is the lowest at 0.355. Further, machine learning (ML) methods such as the backpropagation neural network model (BP), support vector machine (SVM), random forest (RF), and extreme learning machine (ELM) were adopted for predicting the yields of maize. All VIs calculated for each image captured during important phenological stages of maize were set as independent variables and the corresponding yields of each plot were defined as dependent variables. The ML models used the leave one out method (LOO), where the root mean square errors (RMSEs) were 2.157, 1.099, 1.146, and 1.698 (g/hundred grain weight) for BP, SVM, RF, and ELM. The mean absolute errors (MAEs) were 1.739, 0.886, 0.925, and 1.356 (g/hundred grain weight) for BP, SVM, RF, and ELM, respectively. Thus, the SVM method performed better in predicting the yields of maize than the other ML methods. Therefore, it is strongly suggested that the MRBVI calculated from images acquired at different growth stages integrated with advanced ML methods should be used for agricultural- and ecological-related chlorophyll estimation and yield predictions.
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Affiliation(s)
- Yahui Guo
- Beijing Key Laboratory of Urban Hydrological Cycle and Sponge City Technology, College of Water Sciences, Beijing Normal University, Beijing 100875, China; (Y.G.); (Z.W.); (S.W.)
| | - Hanxi Wang
- State Environmental Protection Key Laboratory of Wetland Ecology and Vegetation Restoration/School of Environment, Northeast Normal University, Jingyue Street 2555, Changchun 130017, China;
| | - Zhaofei Wu
- Beijing Key Laboratory of Urban Hydrological Cycle and Sponge City Technology, College of Water Sciences, Beijing Normal University, Beijing 100875, China; (Y.G.); (Z.W.); (S.W.)
| | - Shuxin Wang
- Beijing Key Laboratory of Urban Hydrological Cycle and Sponge City Technology, College of Water Sciences, Beijing Normal University, Beijing 100875, China; (Y.G.); (Z.W.); (S.W.)
| | - Hongyong Sun
- The Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology& Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, The Chinese Academy of Sciences, 286 Huaizhong Road, Shijiazhuang 050021, China;
| | - J. Senthilnath
- Institute for Infocomm Research, Agency for Science, Technology and Research (A*STAR), Singapore 138632, Singapore;
| | - Jingzhe Wang
- MNR Key Laboratory for Geo-Environmental Monitoring of Great Bay Area of the Ministry of Natural Resources & Guangdong Key Laboratory of Urban Informatics & Shenzhen Key Laboratory of Spatial Smart Sensing and Services, Shenzhen University, Shenzhen 518060, China;
| | - Christopher Robin Bryant
- The School of Environmental Design and Rural Development, University of Guelph, Guelph, ON N1G 2W1, Canada;
| | - Yongshuo Fu
- Beijing Key Laboratory of Urban Hydrological Cycle and Sponge City Technology, College of Water Sciences, Beijing Normal University, Beijing 100875, China; (Y.G.); (Z.W.); (S.W.)
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Librán-Embid F, Klaus F, Tscharntke T, Grass I. Unmanned aerial vehicles for biodiversity-friendly agricultural landscapes - A systematic review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 732:139204. [PMID: 32438190 DOI: 10.1016/j.scitotenv.2020.139204] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2019] [Revised: 04/28/2020] [Accepted: 05/02/2020] [Indexed: 06/11/2023]
Abstract
The development of biodiversity-friendly agricultural landscapes is of major importance to meet the sustainable development challenges of our time. The emergence of unmanned aerial vehicles (UAVs), i.e. drones, has opened a new set of research and management opportunities to achieve this goal. On the one hand, this review summarizes UAV applications in agricultural landscapes, focusing on biodiversity conservation and agricultural land monitoring, based on a systematic review of the literature that resulted in 550 studies. Additionally, the review proposes how to integrate UAV research in these fields and point to new potential applications that may contribute to biodiversity-friendly agricultural landscapes. UAV-based imagery can be used to identify and monitor plants, floral resources and animals, facilitating the detection of quality habitats with high prediction power. Through vegetation indices derived from their sensors, UAVs can estimate biomass, monitor crop plant health and stress, detect pest or pathogen infestations, monitor soil fertility and target patches of high weed or invasive plant pressure, allowing precise management practices and reduced agrochemical input. Thereby, UAVs are helping to design biodiversity-friendly agricultural landscapes and to mitigate yield-biodiversity trade-offs. In conclusion, UAV applications have become a major means of biodiversity conservation and biodiversity-friendly management in agriculture, while latest developments, such as the miniaturization and decreasing costs of hyperspectral sensors, promise many new applications for the future.
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Affiliation(s)
| | - Felix Klaus
- Agroecology, University of Göttingen, D-37077 Göttingen, Germany
| | - Teja Tscharntke
- Agroecology, University of Göttingen, D-37077 Göttingen, Germany
| | - Ingo Grass
- Department of Ecology of Tropical Agricultural Systems, University of Hohenheim, D-70599 Stuttgart, Germany
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Abstract
Food security is a longstanding global issue over the last few centuries. Eradicating hunger and all forms of malnutrition by 2030 is still a key challenge. The COVID-19 pandemic has placed additional stress on food production, demand, and supply chain systems; majorly impacting cereal crop producer and importer countries. Short food supply chain based on the production from local farms is less susceptible to travel and export bans and works as a smooth system in the face of these stresses. Local drone-based data solutions can provide an opportunity to address these challenges. This review aims to present a deeper understanding of how the drone-based data solutions can help to combat food insecurity caused due to the pandemic, zoonotic diseases, and other food shocks by enhancing cereal crop productivity of small-scale farming systems in low-income countries. More specifically, the review covers sensing capabilities, promising algorithms, and methods, and added-value of novel machine learning algorithms for local-scale monitoring, biomass and yield estimation, and mapping of them. Finally, we present the opportunities for linking information from citizen science, internet of things (IoT) based on low-cost sensors and drone-based information to satellite data for upscaling crop yield estimation to a larger geographical extent within the Earth Observation umbrella.
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Wei G, Li Y, Zhang Z, Chen Y, Chen J, Yao Z, Lao C, Chen H. Estimation of soil salt content by combining UAV-borne multispectral sensor and machine learning algorithms. PeerJ 2020; 8:e9087. [PMID: 32377459 PMCID: PMC7194094 DOI: 10.7717/peerj.9087] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Accepted: 04/08/2020] [Indexed: 11/20/2022] Open
Abstract
Soil salinization is a global problem closely related to the sustainable development of social economy. Compared with frequently-used satellite-borne sensors, unmanned aerial vehicles (UAVs) equipped with multispectral sensors provide an opportunity to monitor soil salinization with on-demand high spatial and temporal resolution. This study aims to quantitatively estimate soil salt content (SSC) using UAV-borne multispectral imagery, and explore the deep mining of multispectral data. For this purpose, a total of 60 soil samples (0–20 cm) were collected from Shahaoqu Irrigation Area in Inner Mongolia, China. Meanwhile, from the UAV sensor we obtained the multispectral data, based on which 22 spectral covariates (6 spectral bands and 16 spectral indices) were constructed. The sensitive spectral covariates were selected by means of gray relational analysis (GRA), successive projections algorithm (SPA) and variable importance in projection (VIP), and from these selected covariates estimation models were built using back propagation neural network (BPNN) regression, support vector regression (SVR) and random forest (RF) regression, respectively. The performance of the models was assessed by coefficient of determination (R2), root mean squared error (RMSE) and ratio of performance to deviation (RPD). The results showed that the estimation accuracy of the models had been improved markedly using three variable selection methods, and VIP outperformed GRA and GRA outperformed SPA. However, the model accuracy with the three machine learning algorithms turned out to be significantly different: RF > SVR > BPNN. All the 12 SSC estimation models could be used to quantitatively estimate SSC (RPD > 1.4) while the VIP-RF model achieved the highest accuracy (Rc2 = 0.835, RP2 = 0.812, RPD = 2.299). The result of this study proved that UAV-borne multispectral sensor is a feasible instrument for SSC estimation, and provided a reference for further similar research.
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Affiliation(s)
- Guangfei Wei
- College of Water Resources and Architectural Engineering, Northwest A&F University, Yangling, China.,Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas of Ministry of Education, Northwest A&F University, Yangling, China
| | - Yu Li
- College of Water Resources and Architectural Engineering, Northwest A&F University, Yangling, China
| | - Zhitao Zhang
- College of Water Resources and Architectural Engineering, Northwest A&F University, Yangling, China.,Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas of Ministry of Education, Northwest A&F University, Yangling, China
| | - Yinwen Chen
- Department of Foreign Languages, Northwest A&F University, Yangling, China
| | - Junying Chen
- College of Water Resources and Architectural Engineering, Northwest A&F University, Yangling, China.,Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas of Ministry of Education, Northwest A&F University, Yangling, China
| | - Zhihua Yao
- College of Water Resources and Architectural Engineering, Northwest A&F University, Yangling, China.,Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas of Ministry of Education, Northwest A&F University, Yangling, China
| | - Congcong Lao
- College of Water Resources and Architectural Engineering, Northwest A&F University, Yangling, China.,Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas of Ministry of Education, Northwest A&F University, Yangling, China
| | - Huifang Chen
- College of Water Resources and Architectural Engineering, Northwest A&F University, Yangling, China.,Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas of Ministry of Education, Northwest A&F University, Yangling, China
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Quantitative Estimation of Soil Salinization in an Arid Region of the Keriya Oasis Based on Multidimensional Modeling. WATER 2020. [DOI: 10.3390/w12030880] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Soil salinity is one of the major factors causing land degradation and desertification on earth, especially its important damage to farming activities and land-use management in arid and semiarid regions. The salt-affected land is predominant in the Keriya River area of Northwestern China. Then, there is an urgent need for rapid, accurate, and economical monitoring in the salt-affected land. In this study, we used the electrical conductivity (EC) of 353 ground-truth measurements and predictive capability parameters of WorldView-2 (WV-2), such as satellite band reflectance and newly optimum spectral indices (OSI) based on two dimensional and three-dimensional data. The features of spectral bands were extracted and tested, and different new OSI and soil salinity indices using reflectance of wavebands were built, in which spectral data was pre-processed (based on First Derivative (R-FD), Second Derivative (R-SD), Square data (R-SQ), Reciprocal inverse (1/R), and Reciprocal First Derivative (1/R-FD)), utilizing the partial least-squares regression (PLSR) method to construct estimation models and mapping the regional soil-affected land. The results of this study are the following: (a) the new OSI had a higher relevance to EC than one-dimensional data, and (b) the cross-validation of established PLSR models indicated that the β-PLSR model based on the optimal three-band index with different process algorithm performed the best result with R2V = 0.79, Root Mean Square Errors (RMSEV) = 1.51 dS·m−1, and Relative Percent Deviation (RPD) = 2.01 and was used to map the soil salinity over the study site. The results of the study will be helpful for the study of salt-affected land monitoring and evaluation in similar environmental conditions.
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Abstract
With the increasing role that unmanned aerial systems (UAS) are playing in data collection for environmental studies, two key challenges relate to harmonizing and providing standardized guidance for data collection, and also establishing protocols that are applicable across a broad range of environments and conditions. In this context, a network of scientists are cooperating within the framework of the Harmonious Project to develop and promote harmonized mapping strategies and disseminate operational guidance to ensure best practice for data collection and interpretation. The culmination of these efforts is summarized in the present manuscript. Through this synthesis study, we identify the many interdependencies of each step in the collection and processing chain, and outline approaches to formalize and ensure a successful workflow and product development. Given the number of environmental conditions, constraints, and variables that could possibly be explored from UAS platforms, it is impractical to provide protocols that can be applied universally under all scenarios. However, it is possible to collate and systematically order the fragmented knowledge on UAS collection and analysis to identify the best practices that can best ensure the streamlined and rigorous development of scientific products.
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Yu F, Feng S, Du W, Wang D, Guo Z, Xing S, Jin Z, Cao Y, Xu T. A Study of Nitrogen Deficiency Inversion in Rice Leaves Based on the Hyperspectral Reflectance Differential. FRONTIERS IN PLANT SCIENCE 2020; 11:573272. [PMID: 33343590 PMCID: PMC7738345 DOI: 10.3389/fpls.2020.573272] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Accepted: 10/20/2020] [Indexed: 05/05/2023]
Abstract
To achieve rapid, accurate, and non-destructive diagnoses of nitrogen deficiency in cold land japonica rice, hyperspectral data were collected from field experiments to investigate the relationship between the nitrogen (N) content and the difference in the spectral reflectance relationship and to establish the hyperspectral reflectance difference inversion model of differences in the N content of rice. In this study, the hyperspectral reflectance difference was used to invert the nitrogen deficiency of rice and provide a method for the implementation of precision fertilization without reducing the yield of chemical fertilizer. For the purpose of constructing the standard N content and standard spectral reflectance the principle of minimum fertilizer application at maximum yield was used as a reference standard, and the acquired rice leaf nitrogen content and leaf spectral reflectance were differenced from the standard N content and standard spectral reflectance to obtain N content. The difference and spectral reflectance differential were then subjected to discrete wavelet multiscale decomposition, successive projections algorithm, principal component analysis, and iteratively retaining informative variables (IRIVs); the results were treated as partial least squares (PLSR), extreme learning machine (ELM), and genetic algorithm-extreme learning machine (GA-ELM). The results of hyperspectral dimensionality reduction were used as input to establish the inverse model of N content differential in japonica rice. The results showed that the GA-ELM inversion model established by discrete wavelet multi-scale decomposition obtained the optimal results in data set modeling and training. Both the R2 of the training data set and the validation data set were above 0.68, and the root mean square errors (RMSEs) were <0.6 mg/g and were more predictive, stable, and generalizable than the PLSR and ELM predictive models.
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Affiliation(s)
- Fenghua Yu
- College of Information and Electrical Engineering, Shenyang Agricultural University, Shenyang, China
- Liaoning Engineering Research Center for Information Technology in Agriculture, Shenyang, China
| | - Shuai Feng
- College of Information and Electrical Engineering, Shenyang Agricultural University, Shenyang, China
| | - Wen Du
- College of Information and Electrical Engineering, Shenyang Agricultural University, Shenyang, China
- Liaoning Engineering Research Center for Information Technology in Agriculture, Shenyang, China
| | - Dingkang Wang
- College of Information and Electrical Engineering, Shenyang Agricultural University, Shenyang, China
| | - Zhonghui Guo
- College of Information and Electrical Engineering, Shenyang Agricultural University, Shenyang, China
| | - Simin Xing
- College of Information and Electrical Engineering, Shenyang Agricultural University, Shenyang, China
| | - Zhongyu Jin
- College of Information and Electrical Engineering, Shenyang Agricultural University, Shenyang, China
| | - Yingli Cao
- College of Information and Electrical Engineering, Shenyang Agricultural University, Shenyang, China
- Liaoning Engineering Research Center for Information Technology in Agriculture, Shenyang, China
| | - Tongyu Xu
- College of Information and Electrical Engineering, Shenyang Agricultural University, Shenyang, China
- Liaoning Engineering Research Center for Information Technology in Agriculture, Shenyang, China
- *Correspondence: Tongyu Xu,
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