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Chen Y, Rana R, Zhang Y, Hoffman AS, Huang Z, Yang B, Vila FD, Perez-Aguilar JE, Hong J, Li X, Zeng J, Chi M, Kronawitter CX, Wang H, Bare SR, Kulkarni AR, Gates BC. Dynamic structural evolution of MgO-supported palladium catalysts: from metal to metal oxide nanoparticles to surface then subsurface atomically dispersed cations. Chem Sci 2024;15:6454-6464. [PMID: 38699272 PMCID: PMC11062082 DOI: 10.1039/d4sc00035h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2024] [Accepted: 03/21/2024] [Indexed: 05/05/2024]  Open
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Vila FD, Rehr JJ, Kowalski K, Peng B. RT-EOM-CCSD Calculations of Inner and Outer Valence Ionization Energies and Spectral Functions. J Chem Theory Comput 2024;20:1796-1801. [PMID: 38422509 DOI: 10.1021/acs.jctc.3c01371] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/02/2024]
3
Filardi LR, Vila FD, Hong J, Hoffman AS, Perez-Aguilar JE, Bare SR, Runnebaum RC, Kronawitter CX. Impact of Local Structure in Supported CaO Catalysts for Soft-Oxidant-Assisted Methane Coupling Assessed through Ca K-Edge X-ray Absorption Spectroscopy. J Phys Chem C Nanomater Interfaces 2024;128:1165-1176. [PMID: 38293693 PMCID: PMC10823472 DOI: 10.1021/acs.jpcc.3c06527] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2023] [Revised: 12/13/2023] [Accepted: 12/14/2023] [Indexed: 02/01/2024]
4
Mejia-Rodriguez D, Aprà E, Autschbach J, Bauman NP, Bylaska EJ, Govind N, Hammond JR, Kowalski K, Kunitsa A, Panyala A, Peng B, Rehr JJ, Song H, Tretiak S, Valiev M, Vila FD. NWChem: Recent and Ongoing Developments. J Chem Theory Comput 2023;19:7077-7096. [PMID: 37458314 DOI: 10.1021/acs.jctc.3c00421] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2023]
5
Ostervold L, Smerigan A, Liu MJ, Filardi LR, Vila FD, Perez-Aguilar JE, Hong J, Tarpeh WA, Hoffman AS, Greenlee LF, Clark EL, Janik MJ, Bare SR. Cation Incorporation into Copper Oxide Lattice at Highly Oxidizing Potentials. ACS Appl Mater Interfaces 2023;15:47025-47036. [PMID: 37756387 DOI: 10.1021/acsami.3c10296] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/29/2023]
6
Smerigan A, Biswas S, Vila FD, Hong J, Perez-Aguilar J, Hoffman AS, Greenlee L, Getman RB, Bare SR. Aqueous Structure of Lanthanide-EDTA Coordination Complexes Determined by a Combined DFT/EXAFS Approach. Inorg Chem 2023;62:14523-14532. [PMID: 37624729 DOI: 10.1021/acs.inorgchem.3c01334] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/27/2023]
7
Pathak H, Panyala A, Peng B, Bauman NP, Mutlu E, Rehr JJ, Vila FD, Kowalski K. Real-Time Equation-of-Motion Coupled-Cluster Cumulant Green's Function Method: Heterogeneous Parallel Implementation Based on the Tensor Algebra for Many-Body Methods Infrastructure. J Chem Theory Comput 2023;19:2248-2257. [PMID: 37096369 DOI: 10.1021/acs.jctc.3c00045] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/26/2023]
8
Rana R, Vila FD, Kulkarni AR, Bare SR. Bridging the Gap between the X-ray Absorption Spectroscopy and the Computational Catalysis Communities in Heterogeneous Catalysis: A Perspective on the Current and Future Research Directions. ACS Catal 2022. [DOI: 10.1021/acscatal.2c03863] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Nathan SS, Asundi AS, Hoffman AS, Hong J, Zhou C, Vila FD, Cargnello M, Bare SR, Bent SF. Surface Fe Clusters Promote Syngas Reaction to Oxygenates on Rh Catalysts Modified by Atomic Layer Deposition. J Catal 2022. [DOI: 10.1016/j.jcat.2022.08.026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
10
Kas JJ, Vila FD, Tan TS, Rehr JJ. Ab initio calculation of X-ray and related core-level spectroscopies: Green's function approaches. Phys Chem Chem Phys 2022;24:13461-13473. [PMID: 35616020 DOI: 10.1039/d2cp01167k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Chen Y, Rana R, Huang Z, Vila FD, Sours T, Perez-Aguilar JE, Zhao X, Hong J, Hoffman AS, Li X, Shang C, Blum T, Zeng J, Chi M, Salmeron M, Kronawitter CX, Bare SR, Kulkarni AR, Gates BC. Atomically Dispersed Platinum in Surface and Subsurface Sites on MgO Have Contrasting Catalytic Properties for CO Oxidation. J Phys Chem Lett 2022;13:3896-3903. [PMID: 35471032 DOI: 10.1021/acs.jpclett.2c00667] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
12
Vila FD, Kowalski K, Peng B, Kas JJ, Rehr JJ. Real-Time Equation-of-Motion CCSD Cumulant Green's Function. J Chem Theory Comput 2022;18:1799-1807. [PMID: 35157796 DOI: 10.1021/acs.jctc.1c01179] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Chen Y, Rana R, Sours T, Vila FD, Cao S, Blum T, Hong J, Hoffman AS, Fang CY, Huang Z, Shang C, Wang C, Zeng J, Chi M, Kronawitter CX, Bare SR, Gates BC, Kulkarni AR. A Theory-Guided X-ray Absorption Spectroscopy Approach for Identifying Active Sites in Atomically Dispersed Transition-Metal Catalysts. J Am Chem Soc 2021;143:20144-20156. [PMID: 34806881 DOI: 10.1021/jacs.1c07116] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
14
Kas JJ, Vila FD, Pemmaraju CD, Tan TS, Rehr JJ. Advanced calculations of X-ray spectroscopies with FEFF10 and Corvus. J Synchrotron Radiat 2021;28:1801-1810. [PMID: 34738933 DOI: 10.1107/s1600577521008614] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2021] [Accepted: 08/17/2021] [Indexed: 06/13/2023]
15
Vila FD, Kas JJ, Rehr JJ, Kowalski K, Peng B. Equation-of-Motion Coupled-Cluster Cumulant Green's Function for Excited States and X-Ray Spectra. Front Chem 2021;9:734945. [PMID: 34631660 PMCID: PMC8493088 DOI: 10.3389/fchem.2021.734945] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Accepted: 09/06/2021] [Indexed: 11/13/2022]  Open
16
Vila FD, Rehr JJ, Kas JJ, Kowalski K, Peng B. Real-Time Coupled-Cluster Approach for the Cumulant Green's Function. J Chem Theory Comput 2020;16:6983-6992. [PMID: 33108872 DOI: 10.1021/acs.jctc.0c00639] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
17
Rehr JJ, Vila FD, Kas JJ, Hirshberg NY, Kowalski K, Peng B. Equation of motion coupled-cluster cumulant approach for intrinsic losses in x-ray spectra. J Chem Phys 2020;152:174113. [PMID: 32384843 DOI: 10.1063/5.0004865] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
18
Asundi AS, Hoffman AS, Bothra P, Boubnov A, Vila FD, Yang N, Singh JA, Zeng L, Raiford JA, Abild-Pedersen F, Bare SR, Bent SF. Understanding Structure-Property Relationships of MoO3-Promoted Rh Catalysts for Syngas Conversion to Alcohols. J Am Chem Soc 2019;141:19655-19668. [PMID: 31724857 DOI: 10.1021/jacs.9b07460] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
19
Travnikova O, Patanen M, Söderström J, Lindblad A, Kas JJ, Vila FD, Céolin D, Marchenko T, Goldsztejn G, Guillemin R, Journel L, Carroll TX, Børve KJ, Decleva P, Rehr JJ, Mårtensson N, Simon M, Svensson S, Sæthre LJ. Energy-Dependent Relative Cross Sections in Carbon 1s Photoionization: Separation of Direct Shake and Inelastic Scattering Effects in Single Molecules. J Phys Chem A 2019;123:7619-7636. [PMID: 31386367 DOI: 10.1021/acs.jpca.9b05063] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Story SM, Vila FD, Kas JJ, Raniga KB, Pemmaraju CD, Rehr JJ. Corvus: a framework for interfacing scientific software for spectroscopic and materials science applications. J Synchrotron Radiat 2019;26:1694-1704. [PMID: 31490161 DOI: 10.1107/s1600577519007495] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2019] [Accepted: 05/23/2019] [Indexed: 06/10/2023]
21
Vila FD, Spencer JW, Kas JJ, Rehr JJ, Bridges F. Extended X-Ray Absorption Fine Structure of ZrW2O8: Theory vs. Experiment. Front Chem 2018;6:356. [PMID: 30191149 PMCID: PMC6115524 DOI: 10.3389/fchem.2018.00356] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Accepted: 07/30/2018] [Indexed: 11/13/2022]  Open
22
Vila FD, Hayashi ST, Rehr JJ. Efficient Calculation of the Negative Thermal Expansion in ZrW2O8. Front Chem 2018;6:296. [PMID: 30105223 PMCID: PMC6077204 DOI: 10.3389/fchem.2018.00296] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2018] [Accepted: 06/26/2018] [Indexed: 11/15/2022]  Open
23
Vila FD, Rehr JJ, Nuzzo RG, Frenkel AI. Anomalous Structural Disorder in Supported Pt Nanoparticles. J Phys Chem Lett 2017;8:3284-3288. [PMID: 28669195 DOI: 10.1021/acs.jpclett.7b01446] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
24
Beckwith MA, Ames W, Vila FD, Krewald V, Pantazis DA, Mantel C, Pécaut J, Gennari M, Duboc C, Collomb MN, Yano J, Rehr JJ, Neese F, DeBeer S. How Accurately Can Extended X-ray Absorption Spectra Be Predicted from First Principles? Implications for Modeling the Oxygen-Evolving Complex in Photosystem II. J Am Chem Soc 2015;137:12815-34. [PMID: 26352328 DOI: 10.1021/jacs.5b00783] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
25
Carroll TX, Zahl MG, Børve KJ, Sæthre LJ, Decleva P, Ponzi A, Kas JJ, Vila FD, Rehr JJ, Thomas TD. Intensity oscillations in the carbon 1s ionization cross sections of 2-butyne. J Chem Phys 2014;138:234310. [PMID: 23802963 DOI: 10.1063/1.4810870] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
26
Mårtensson N, Söderstrom J, Svensson S, Travnikova O, Patanen M, Miron C, Sæthre LJ, Børve KJ, Thomas TD, Kas JJ, Vila FD, Rehr JJ. On the relation between X-ray Photoelectron Spectroscopy and XAFS. ACTA ACUST UNITED AC 2013. [DOI: 10.1088/1742-6596/430/1/012131] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
27
Goldberg IG, Vila FD, Jach T. Surface Effects on the Crystallization of Cyclo-1,3,5-trimethylene-2,4,6-trinitramine (RDX) and the Consequences for its N K X-ray Emission Spectrum. J Phys Chem A 2012;116:9897-9. [DOI: 10.1021/jp306978x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
28
Söderström J, Mårtensson N, Travnikova O, Patanen M, Miron C, Sæthre LJ, Børve KJ, Rehr JJ, Kas JJ, Vila FD, Thomas TD, Svensson S. Nonstoichiometric intensities in core photoelectron spectroscopy. Phys Rev Lett 2012;108:193005. [PMID: 23003034 DOI: 10.1103/physrevlett.108.193005] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2011] [Indexed: 06/01/2023]
29
Vila FD, Jach T, Elam WT, Rehr JJ, Denlinger JD. X-ray Emission Spectroscopy of Nitrogen-Rich Compounds. J Phys Chem A 2011;115:3243-50. [DOI: 10.1021/jp108539v] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
30
Vila FD, Strubbe DA, Takimoto Y, Andrade X, Rubio A, Louie SG, Rehr JJ. Basis set effects on the hyperpolarizability of CHCl3: Gaussian-type orbitals, numerical basis sets and real-space grids. J Chem Phys 2010;133:034111. [DOI: 10.1063/1.3457362] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
31
Rehr JJ, Vila FD, Gardner JP, Svec L, Prange M. Scientific Computing in the Cloud. Comput Sci Eng 2010. [DOI: 10.1109/mcse.2010.70] [Citation(s) in RCA: 68] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
32
Rehr JJ, Kas JJ, Vila FD, Prange MP, Jorissen K. Parameter-free calculations of X-ray spectra with FEFF9. Phys Chem Chem Phys 2010;12:5503-13. [DOI: 10.1039/b926434e] [Citation(s) in RCA: 810] [Impact Index Per Article: 57.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
33
Fister TT, Seidler GT, Shirley EL, Vila FD, Rehr JJ, Nagle KP, Linehan JC, Cross JO. The local electronic structure of alpha-Li3N. J Chem Phys 2008. [PMID: 18681665 DOI: 10.1103/physrevb.79.174117] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/14/2023]  Open
34
Fister TT, Vila FD, Seidler GT, Svec L, Linehan JC, Cross JO. Local Electronic Structure of Dicarba-closo-dodecarboranes C2B10H12. J Am Chem Soc 2007;130:925-32. [DOI: 10.1021/ja074794u] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
35
Isborn CM, Leclercq A, Vila FD, Dalton LR, Brédas JL, Eichinger BE, Robinson BH. Comparison of Static First Hyperpolarizabilities Calculated with Various Quantum Mechanical Methods. J Phys Chem A 2007;111:1319-27. [PMID: 17256825 DOI: 10.1021/jp064096g] [Citation(s) in RCA: 112] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
36
Vila FD, Jordan KD. Theoretical Study of the Dipole-Bound Excited States of I-(H2O)4. J Phys Chem A 2002. [DOI: 10.1021/jp013169n] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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