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Zhang W, Gundel PE, Jáuregui R, Card SD, Mace WJ, Johnson RD, Bastías DA. The growth promotion in endophyte symbiotic plants does not penalise the resistance to herbivores and bacterial microbiota. Plant Cell Environ 2024. [PMID: 38616528 DOI: 10.1111/pce.14912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Revised: 03/19/2024] [Accepted: 03/29/2024] [Indexed: 04/16/2024]
Abstract
A trade-off between growth and defence against biotic stresses is common in plants. Fungal endophytes of the genus Epichloë may relieve this trade-off in their host grasses since they can simultaneously induce plant growth and produce antiherbivore alkaloids that circumvent the need for host defence. The Epichloë ability to decouple the growth-defence trade-off was evaluated by subjecting ryegrass with and without Epichloë endophytes to an exogenous treatment with gibberellin (GA) followed by a challenge with Rhopalosiphum padi aphids. In agreement with the endophyte-mediated trade-off decoupling hypothesis, the GA-derived promotion of plant growth increased the susceptibility to aphids in endophyte-free plants but did not affect the insect resistance in endophyte-symbiotic plants. In line with the unaltered insect resistance, the GA treatment did not reduce the concentration of Epichloë-derived alkaloids. The Epichloë mycelial biomass was transiently increased by the GA treatment but at the expense of hyphal integrity. The response of the phyllosphere bacterial microbiota to both GA treatment and Epichloë was also evaluated. Only Epichloë, and not the GA treatment, altered the composition of the phyllosphere microbiota and the abundance of certain bacterial taxa. Our findings clearly demonstrate that Epichloë does indeed relieve the plant growth-defence trade-off.
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Affiliation(s)
- Wei Zhang
- AgResearch Limited, Grasslands Research Centre, Palmerston North, New Zealand
| | - Pedro E Gundel
- Centro de Ecología Integrativa, Instituto de Ciencias Biológicas, Universidad de Talca, Talca, Chile
| | - Ruy Jáuregui
- Animal Health Laboratory, Biosecurity New Zealand, Ministry for Primary Industries, Upper Hutt, New Zealand
| | - Stuart D Card
- AgResearch Limited, Grasslands Research Centre, Palmerston North, New Zealand
| | - Wade J Mace
- AgResearch Limited, Grasslands Research Centre, Palmerston North, New Zealand
| | - Richard D Johnson
- AgResearch Limited, Grasslands Research Centre, Palmerston North, New Zealand
| | - Daniel A Bastías
- AgResearch Limited, Grasslands Research Centre, Palmerston North, New Zealand
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2
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Richardson KA, de Bonth ACM, Beechey-Gradwell Z, Kadam S, Cooney LJ, Nelson KA, Cookson R, Winichayakul S, Reid M, Anderson P, Crowther T, Zou X, Maher D, Xue H, Scott RW, Allan A, Johnson RD, Card SD, Mace WJ, Roberts NJ, Bryan G. Epichloë fungal endophyte interactions in perennial ryegrass (Lolium perenne L.) modified to accumulate foliar lipids for increased energy density. BMC Plant Biol 2023; 23:636. [PMID: 38072924 PMCID: PMC10712098 DOI: 10.1186/s12870-023-04635-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/22/2023] [Accepted: 11/26/2023] [Indexed: 12/18/2023]
Abstract
BACKGROUND Commercial cultivars of perennial ryegrass infected with selected Epichloë fungal endophytes are highly desirable in certain pastures as the resulting mutualistic association has the capacity to confer agronomic benefits (such as invertebrate pest deterrence) largely due to fungal produced secondary metabolites (e.g., alkaloids). In this study, we investigated T2 segregating populations derived from two independent transformation events expressing diacylglycerol acyltransferase (DGAT) and cysteine oleosin (CO) genes designed to increase foliar lipid and biomass accumulation. These populations were either infected with Epichloë festucae var. lolii strain AR1 or Epichloë sp. LpTG-3 strain AR37 to examine relationships between the introduced trait and the endophytic association. Here we report on experiments designed to investigate if expression of the DGAT + CO trait in foliar tissues of perennial ryegrass could negatively impact the grass-endophyte association and vice versa. Both endophyte and plant characters were measured under controlled environment and field conditions. RESULTS Expected relative increases in total fatty acids of 17-58% accrued as a result of DGAT + CO expression with no significant difference between the endophyte-infected and non-infected progeny. Hyphal growth in association with DGAT + CO expression appeared normal when compared to control plants in a growth chamber. There was no significant difference in mycelial biomass for both strains AR1 and AR37, however, Epichloë-derived alkaloid concentrations were significantly lower on some occasions in the DGAT + CO plants compared to the corresponding null-segregant progenies, although these remained within the reported range for bioactivity. CONCLUSIONS These results suggest that the mutualistic association formed between perennial ryegrass and selected Epichloë strains does not influence expression of the host DGAT + CO technology, but that endophyte performance may be reduced under some circumstances. Further investigation will now be required to determine the preferred genetic backgrounds for introgression of the DGAT + CO trait in combination with selected endophyte strains, as grass host genetics is a major determinant to the success of the grass-endophyte association in this species.
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Grants
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- contract C10X1603 Ministry of Business, Innovation and Employment
- AgResearch Strategic Science Investment Fund
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Affiliation(s)
- Kim A Richardson
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand.
| | | | | | - Suhas Kadam
- Division of Plant Sciences & Technology, University of Missouri, Columbia, 65201, MO, USA
- Present address: SGS North America, Crop Sciences, Brookings, SD, 57006, USA
| | - Luke J Cooney
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Kelly A Nelson
- Division of Plant Sciences & Technology, University of Missouri, Novelty, 63460, MO, USA
| | - Ruth Cookson
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | | | - Michele Reid
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Philip Anderson
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Tracey Crowther
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Xiuying Zou
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Dorothy Maher
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Hong Xue
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Richard W Scott
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Anne Allan
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Richard D Johnson
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Stuart D Card
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Wade J Mace
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Nicholas J Roberts
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
| | - Gregory Bryan
- Resilient Agriculture, AgResearch Ltd, Palmerston North, 4442, New Zealand
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3
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Forte FP, Malinowska M, Nagy I, Schmid J, Dijkwel P, Hume DE, Johnson RD, Simpson WR, Asp T. Corrigendum: Methylome changes in Lolium perenne associated with long-term colonisation by the endophytic fungus Epichloë sp. LpTG-3 strain AR37. Front Plant Sci 2023; 14:1332690. [PMID: 38023840 PMCID: PMC10680099 DOI: 10.3389/fpls.2023.1332690] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/03/2023] [Accepted: 11/06/2023] [Indexed: 12/01/2023]
Abstract
[This corrects the article DOI: 10.3389/fpls.2023.1258100.].
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Affiliation(s)
- Flavia Pilar Forte
- Center for Quantitative Genetics and Genomics, Faculty of Technical Sciences, Aarhus University, Aarhus, Denmark
| | - Marta Malinowska
- Center for Quantitative Genetics and Genomics, Faculty of Technical Sciences, Aarhus University, Aarhus, Denmark
| | - Istvan Nagy
- Center for Quantitative Genetics and Genomics, Faculty of Technical Sciences, Aarhus University, Aarhus, Denmark
| | - Jan Schmid
- Ferguson Street Laboratories, Palmerston North, New Zealand
- School of Fundamental Sciences, Massey University, Palmerston North, New Zealand
| | - Paul Dijkwel
- Ferguson Street Laboratories, Palmerston North, New Zealand
| | - David E. Hume
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | | | - Wayne R. Simpson
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | - Torben Asp
- Center for Quantitative Genetics and Genomics, Faculty of Technical Sciences, Aarhus University, Aarhus, Denmark
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4
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Dashwood CD, Walker AH, Kwasigroch MP, Veiga LSI, Faure Q, Vale JG, Porter DG, Manuel P, Khalyavin DD, Orlandi F, Colin CV, Fabelo O, Krüger F, Perry RS, Johnson RD, Green AG, McMorrow DF. Strain control of a bandwidth-driven spin reorientation in Ca 3Ru 2O 7. Nat Commun 2023; 14:6197. [PMID: 37794061 PMCID: PMC10550943 DOI: 10.1038/s41467-023-41714-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2022] [Accepted: 09/15/2023] [Indexed: 10/06/2023] Open
Abstract
The layered-ruthenate family of materials possess an intricate interplay of structural, electronic and magnetic degrees of freedom that yields a plethora of delicately balanced ground states. This is exemplified by Ca3Ru2O7, which hosts a coupled transition in which the lattice parameters jump, the Fermi surface partially gaps and the spins undergo a 90∘ in-plane reorientation. Here, we show how the transition is driven by a lattice strain that tunes the electronic bandwidth. We apply uniaxial stress to single crystals of Ca3Ru2O7, using neutron and resonant x-ray scattering to simultaneously probe the structural and magnetic responses. These measurements demonstrate that the transition can be driven by externally induced strain, stimulating the development of a theoretical model in which an internal strain is generated self-consistently to lower the electronic energy. We understand the strain to act by modifying tilts and rotations of the RuO6 octahedra, which directly influences the nearest-neighbour hopping. Our results offer a blueprint for uncovering the driving force behind coupled phase transitions, as well as a route to controlling them.
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Affiliation(s)
- C D Dashwood
- London Centre for Nanotechnology and Department of Physics and Astronomy, University College London, London, WC1E 6BT, UK.
| | - A H Walker
- London Centre for Nanotechnology and Department of Physics and Astronomy, University College London, London, WC1E 6BT, UK.
| | - M P Kwasigroch
- Department of Mathematics, University College London, London, WC1H 0AY, UK
- Trinity College, Cambridge, CB2 1TQ, UK
| | - L S I Veiga
- London Centre for Nanotechnology and Department of Physics and Astronomy, University College London, London, WC1E 6BT, UK
- Diamond Light Source, Harwell Science and Innovation Campus, Didcot, Oxfordshire, OX11 0DE, UK
| | - Q Faure
- London Centre for Nanotechnology and Department of Physics and Astronomy, University College London, London, WC1E 6BT, UK
- Laboratoire León Brillouin, CEA, CNRS, Université Paris-Saclay, CEA-Saclay, 91191, Gif-sur-Yvette, France
| | - J G Vale
- London Centre for Nanotechnology and Department of Physics and Astronomy, University College London, London, WC1E 6BT, UK
| | - D G Porter
- Diamond Light Source, Harwell Science and Innovation Campus, Didcot, Oxfordshire, OX11 0DE, UK
| | - P Manuel
- ISIS Neutron and Muon Source, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire, OX11 0QX, UK
| | - D D Khalyavin
- ISIS Neutron and Muon Source, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire, OX11 0QX, UK
| | - F Orlandi
- ISIS Neutron and Muon Source, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire, OX11 0QX, UK
| | - C V Colin
- Université Grenoble Alpes, CNRS, Institut Néel, 38000, Grenoble, France
| | - O Fabelo
- Institut Laue-Langevin, 71 Avenue des Martyrs, CS 20156, 38042, Grenoble, France
| | - F Krüger
- London Centre for Nanotechnology and Department of Physics and Astronomy, University College London, London, WC1E 6BT, UK
- ISIS Neutron and Muon Source, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire, OX11 0QX, UK
| | - R S Perry
- London Centre for Nanotechnology and Department of Physics and Astronomy, University College London, London, WC1E 6BT, UK
| | - R D Johnson
- Department of Physics and Astronomy, University College London, London, WC1E 6BT, UK
| | - A G Green
- London Centre for Nanotechnology and Department of Physics and Astronomy, University College London, London, WC1E 6BT, UK
| | - D F McMorrow
- London Centre for Nanotechnology and Department of Physics and Astronomy, University College London, London, WC1E 6BT, UK
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5
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Zhang W, Forester NT, Chettri P, Heilijgers M, Mace WJ, Maes E, Morozova Y, Applegate ER, Johnson RD, Johnson LJ. Characterization of the Biosynthetic Gene Cluster for the Ribosomally Synthesized Cyclic Peptide Epichloëcyclins in Epichloë festucae. J Agric Food Chem 2023; 71:13965-13978. [PMID: 37704203 PMCID: PMC10540207 DOI: 10.1021/acs.jafc.3c03073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Revised: 08/14/2023] [Accepted: 08/16/2023] [Indexed: 09/15/2023]
Abstract
The various grass-induced epichloëcyclins of the Epichloë spp. are ribosomally synthesized and post-translationally modified peptides (RiPPs), produced as small, secreted cyclopeptides from a single gene, gigA. Here, four clustered and coregulated genes (gigA, gigB, gigC, and kexB) with predicted roles in epichloëcyclin production in Epichloë festucae were evaluated through gene disruption. Subsequent chemical analysis indicates that GigB is a DUF3328 domain-containing protein associated with cyclization of epichloëcyclins; GigC is a methyltransferase enzyme responsible for N-methylation of desmethylepichloëcyclins; and KexB is a subtilisin-like enzyme, partly responsible for the propeptide cleavage of epichloëcyclin intermediates. Symbiotic effects on the host phenotype were not observed for gigA, gigC, or kexB mutants, although ΔgigB infection correlated with increased host tiller height and biomass, while only ΔkexB exhibited an effect on endophyte morphology. Disrupting epichloëcyclin biosynthesis showed negligible influence on the biosynthesis of E. festucae-associated alkaloids. Epichloëcyclins may perform other secondary metabolism functions in Epichloë and other fungi.
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Affiliation(s)
- Wei Zhang
- Grasslands
Research Centre, AgResearch Limited, Palmerston North 4442, New Zealand
| | - Natasha T. Forester
- Grasslands
Research Centre, AgResearch Limited, Palmerston North 4442, New Zealand
| | - Pranav Chettri
- Grasslands
Research Centre, AgResearch Limited, Palmerston North 4442, New Zealand
| | - Maurice Heilijgers
- Grasslands
Research Centre, AgResearch Limited, Palmerston North 4442, New Zealand
| | - Wade J. Mace
- Grasslands
Research Centre, AgResearch Limited, Palmerston North 4442, New Zealand
| | - Evelyne Maes
- Lincoln
Research Centre, AgResearch Limited, Lincoln 7608, New Zealand
| | - Yulia Morozova
- Grasslands
Research Centre, AgResearch Limited, Palmerston North 4442, New Zealand
| | - Emma R. Applegate
- Grasslands
Research Centre, AgResearch Limited, Palmerston North 4442, New Zealand
| | - Richard D. Johnson
- Grasslands
Research Centre, AgResearch Limited, Palmerston North 4442, New Zealand
| | - Linda J. Johnson
- Grasslands
Research Centre, AgResearch Limited, Palmerston North 4442, New Zealand
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6
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Forte FP, Malinowska M, Nagy I, Schmid J, Dijkwel P, Hume DE, Johnson RD, Simpson WR, Asp T. Methylome changes in Lolium perenne associated with long-term colonisation by the endophytic fungus Epichloë sp. LpTG-3 strain AR37. Front Plant Sci 2023; 14:1258100. [PMID: 37810388 PMCID: PMC10557135 DOI: 10.3389/fpls.2023.1258100] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Accepted: 08/31/2023] [Indexed: 10/10/2023]
Abstract
Epichloë spp. often form mutualistic interactions with cool-season grasses, such as Lolium perenne. However, the molecular mechanisms underlying this interaction remain poorly understood. In this study, we employed reduced representation bisulfite sequencing method (epiGBS) to investigate the impact of the Epichloë sp. LpTG-3 strain AR37 on the methylome of L. perenne across multiple grass generations and under drought stress conditions. Our results showed that the presence of the endophyte leads to a decrease in DNA methylation across genomic features, with differentially methylated regions primarily located in intergenic regions and CHH contexts. The presence of the endophyte was consistently associated with hypomethylation in plants across generations. This research sheds new light on the molecular mechanisms governing the mutualistic interaction between Epichloë sp. LpTG-3 strain AR37 and L. perenne. It underscores the role of methylation changes associated with endophyte infection and suggests that the observed global DNA hypomethylation in L. perenne may be influenced by factors such as the duration of the endophyte-plant association and the accumulation of genetic and epigenetic changes over time.
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Affiliation(s)
- Flavia Pilar Forte
- Center for Quantitative Genetics and Genomics, Faculty of Technical Sciences, Aarhus University, Aarhus, Denmark
| | - Marta Malinowska
- Center for Quantitative Genetics and Genomics, Faculty of Technical Sciences, Aarhus University, Aarhus, Denmark
| | - Istvan Nagy
- Center for Quantitative Genetics and Genomics, Faculty of Technical Sciences, Aarhus University, Aarhus, Denmark
| | - Jan Schmid
- Ferguson Street Laboratories, Palmerston North, New Zealand
- School of Fundamental Sciences, Massey University, Palmerston North, New Zealand
| | - Paul Dijkwel
- Ferguson Street Laboratories, Palmerston North, New Zealand
| | - David E. Hume
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | | | - Wayne R. Simpson
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | - Torben Asp
- Center for Quantitative Genetics and Genomics, Faculty of Technical Sciences, Aarhus University, Aarhus, Denmark
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7
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Dirr EW, Patel Y, Johnson RD, Otto KJ. The effects of targeted vagus nerve stimulation on glucose homeostasis in STZ-induced diabetic rodents. Front Neurosci 2023; 17:1179276. [PMID: 37397461 PMCID: PMC10309008 DOI: 10.3389/fnins.2023.1179276] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2023] [Accepted: 05/15/2023] [Indexed: 07/04/2023] Open
Abstract
During type 1 diabetes, an autoimmune attack destroys pancreatic β-cells leading to the inability to maintain glucose homeostasis. These β-cells are neuroresponsive endocrine cells which normally secrete insulin partially in response to input from the vagus nerve. This neural pathway can be utilized as a point of therapeutic intervention by delivering exogenous stimulation to drive increased insulin secretion. In this study, a cuff electrode was implanted on the pancreatic branch of the vagus nerve just prior to pancreatic insertion in rats, and a continuous glucose meter was implanted into the descending aorta. Streptozotocin (STZ) was used to induce a diabetic state, and changes in blood glucose were assessed using various stimulation parameters. Stimulation driven changes in hormone secretion, pancreatic blood flow, and islet cell populations were assessed. We found increased changes in the rate of blood glucose change during stimulation which subsided after stimulation ended paired with increased concentration of circulating insulin. We did not observe increased pancreatic perfusion, which suggests that the modulation of blood glucose was due to the activation of b-cells rather than changes in the extra-organ transport of insulin. Pancreatic neuromodulation showed potentially protective effects by reducing deficits in islet diameter, and ameliorating insulin loss after STZ treatment.
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Affiliation(s)
- Elliott W. Dirr
- J. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, Gainesville, FL, United States
| | - Yogi Patel
- Department of Biomedical Engineering, Georgia Institute of Technology, Atlanta, GA, United States
| | - Richard D. Johnson
- Department of Neuroscience, University of Florida, Gainesville, FL, United States
- Department of Physiological Sciences, University of Florida, Gainesville, FL, United States
| | - Kevin J. Otto
- J. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, Gainesville, FL, United States
- Department of Neuroscience, University of Florida, Gainesville, FL, United States
- Department of Neurology, University of Florida, Gainesville, FL, United States
- Department of Materials Science and Engineering, University of Florida, Gainesville, FL, United States
- Department of Electrical and Computer Engineering, University of Florida, Gainesville, FL, United States
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8
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Robilotto GL, Yang OJ, Alom F, Johnson RD, Mickle AD. Optogenetic urothelial cell stimulation induces bladder contractions and pelvic nerve afferent firing. Am J Physiol Renal Physiol 2023. [PMID: 37318991 DOI: 10.1152/ajprenal.00035.2023] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Accepted: 06/08/2023] [Indexed: 06/17/2023] Open
Abstract
Urothelial cells, which play an essential role in the barrier function, are also thought to play a sensory role in bladder physiology by releasing signaling molecules in response to sensory stimuli that act upon adjacent sensory neurons. However, it is challenging to study this communication due to the overlap in receptor expression and proximity of urothelial cells to sensory neurons. To overcome this challenge, we have developed a mouse model where we can directly stimulate urothelial cells using optogenetics. We have crossed a uroplakin II-cre mouse (UPK2-Cre) with a mouse that expresses the light-activated cation channel, Channelrhodopsin-2 (ChR2), in the presence of cre-expression. Optogenetic stimulation of urothelial cells cultured from UPK2-ChR2 initiates cellular depolarization and release of adenosine triphosphate. Cystometry recordings demonstrate that optical stimulation of urothelial cells increases bladder pressure and pelvic nerve activity. Increases in bladder pressure persisted, albeit to a lesser extent, when the bladder was excised in an in vitro preparation. The P2X receptor antagonist, PPADS, significantly reduced optically evoked bladder contractions in vivo and ex vivo. Further, corresponding nerve activity was also inhibited with PPADS. Our data suggest that urothelial cells can initiate robust bladder contractions via sensory nerve signaling or contractions through local signaling mechanisms. This data supports a foundation of literature demonstrating communication between sensory neurons and urothelial cells. Importantly, with further use of these optogenetic tools, we hope to scrutinize this signaling mechanism, its importance for normal micturition and nociception, and how it may be altered in pathophysiologic conditions.
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Affiliation(s)
- Gabreilla L Robilotto
- Department of Physiological Sciences, College of Veterinary Medicine, University of Florida, Gainesville, Florida, United States, United States
| | - Olivia J Yang
- Department of Physiological Sciences, College of Veterinary Medicine, University of Florida, Gainesville, Florida, United States, United States
| | - Firoj Alom
- Department of Physiological Sciences, College of Veterinary Medicine, University of Florida, Gainesville, Florida, United States, United States
- Department of Veterinary and Animal Sciences, University of Rajshahi, Rajshahi, Bangladesh
| | - Richard D Johnson
- Department of Physiological Sciences, College of Veterinary Medicine, University of Florida, Gainesville, Florida, United States, United States
- Department of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, United States
| | - Aaron D Mickle
- Department of Physiological Sciences, College of Veterinary Medicine, University of Florida, Gainesville, Florida, United States, United States
- Department of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, United States
- J. Crayton Pruitt Family Department of Biomedical Engineering, College of Engineering, University of Florida, Gainesville, Florida, United States
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9
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Rahnama M, Maclean P, Fleetwood DJ, Johnson RD. Comparative Transcriptomics Profiling of Perennial Ryegrass Infected with Wild Type or a Δ velA Epichloë festucae Mutant Reveals Host Processes Underlying Mutualistic versus Antagonistic Interactions. J Fungi (Basel) 2023; 9:jof9020190. [PMID: 36836305 PMCID: PMC9959145 DOI: 10.3390/jof9020190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2022] [Revised: 01/05/2023] [Accepted: 01/07/2023] [Indexed: 02/05/2023] Open
Abstract
Epichloë species form bioprotective endophytic symbioses with many cool-season grasses, including agriculturally important forage grasses. Despite its importance, relatively little is known about the molecular details of the interaction and the regulatory genes involved. VelA is a key global regulator in fungal secondary metabolism and development. In previous studies, we showed the requirement of velA for E. festucae to form a mutualistic interaction with Lolium perenne. We showed that VelA regulates the expression of genes encoding proteins involved in membrane transport, fungal cell wall biosynthesis, host cell wall degradation, and secondary metabolism, along with several small-secreted proteins in Epichloë festucae. Here, by a comparative transcriptomics analysis on perennial ryegrass seedlings and mature plants, which are endophyte free or infected with wild type (mutualistic interaction) or mutant ΔvelA E. festucae (antagonistic or incompatible interaction), regulatory effects of the endophytic interaction on perennial ryegrass development was studied. We show that ΔvelA mutant associations influence the expression of genes involved in primary metabolism, secondary metabolism, and response to biotic and abiotic stresses compared with wild type associations, providing an insight into processes defining mutualistic versus antagonistic interactions.
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Affiliation(s)
- Mostafa Rahnama
- Department of Biology, Tennessee Tech University, Cookeville, TN 38505, USA
- AgResearch, Grasslands Research Centre, Palmerston North 4442, New Zealand
- Correspondence: (M.R.); (R.D.J.)
| | - Paul Maclean
- AgResearch, Grasslands Research Centre, Palmerston North 4442, New Zealand
| | | | - Richard D. Johnson
- AgResearch, Grasslands Research Centre, Palmerston North 4442, New Zealand
- Correspondence: (M.R.); (R.D.J.)
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10
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Mesa AM, Medrano TI, Sirohi VK, Walker WH, Johnson RD, Tevosian SG, Adkin AM, Cooke PS. Identification and characterization of novel abdominal and pelvic brown adipose depots in mice. Adipocyte 2022; 11:616-629. [PMID: 36260113 PMCID: PMC9586652 DOI: 10.1080/21623945.2022.2133415] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/29/2023] Open
Abstract
Brown adipose tissue (BAT) generates heat through non-shivering thermogenesis, and increasing BAT amounts or activity could facilitate obesity treatment and provide metabolic benefits. In mice, BAT has been reported in perirenal, thoracic and cranial sites. Here, we describe new pelvic and lower abdominal BAT depots located around the urethra, internal reproductive and urinary tract organs and major lower pelvic blood vessels, as well as between adjacent muscles where the upper hind leg meets the abdominal cavity. Immunohistochemical, western blot and PCR analyses revealed that these tissues expressed BAT markers such as uncoupling protein 1 (UCP1) and CIDEA, but not white adipose markers, and β3-adrenergic stimulation increased UCP1 amounts, a classic characteristic of BAT tissue. The newly identified BAT stores contained extensive sympathetic innervation with high mitochondrial density and multilocular lipid droplets similar to interscapular BAT. BAT repositories were present and functional neonatally, and showed developmental changes between the neonatal and adult periods. In summary, several new depots showing classical BAT characteristics are reported and characterized in the lower abdominal/pelvic region of mice. These BAT stores are likely significant metabolic regulators in the mouse and some data suggests that similar BAT depots may also exist in humans.
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Affiliation(s)
- Ana M. Mesa
- Department of Physiological Sciences, University of Florida, Gainesville, FL, USA
| | - Theresa I. Medrano
- Department of Physiological Sciences, University of Florida, Gainesville, FL, USA
| | - Vijay K. Sirohi
- Department of Physiological Sciences, University of Florida, Gainesville, FL, USA
| | - William H. Walker
- Department of Obstetrics, Gynecology and Reproductive Sciences, University of Pittsburgh and Magee-Womens Research Institute, Pittsburgh, PA, USA
| | - Richard D. Johnson
- Department of Physiological Sciences, University of Florida, Gainesville, FL, USA
| | - Sergei G. Tevosian
- Department of Physiological Sciences, University of Florida, Gainesville, FL, USA
| | - Angie M. Adkin
- Department of Physiological Sciences, University of Florida, Gainesville, FL, USA
| | - Paul S. Cooke
- Department of Physiological Sciences, University of Florida, Gainesville, FL, USA,CONTACT Paul S. Cooke Department of Physiological Sciences, University of Florida, Gainesville, FL32610, USA
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11
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Zhang W, Forester NT, Moon CD, Maclean PH, Gagic M, Arojju SK, Card SD, Matthew C, Johnson RD, Johnson LJ, Faville MJ, Voisey CR. Epichloë seed transmission efficiency is influenced by plant defense response mechanisms. Front Plant Sci 2022; 13:1025698. [PMID: 36340377 PMCID: PMC9635450 DOI: 10.3389/fpls.2022.1025698] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Accepted: 09/30/2022] [Indexed: 06/16/2023]
Abstract
Asexual Epichloë are endophytic fungi that form mutualistic symbioses with cool-season grasses, conferring to their hosts protection against biotic and abiotic stresses. Symbioses are maintained between grass generations as hyphae are vertically transmitted from parent to progeny plants through seed. However, endophyte transmission to the seed is an imperfect process where not all seeds become infected. The mechanisms underpinning the varying efficiencies of seed transmission are poorly understood. Host gene expression in response to Epichloë sp. LpTG-3 strain AR37 was examined within inflorescence primordia and ovaries of high and low endophyte transmission genotypes within a single population of perennial ryegrass. A genome-wide association study was conducted to identify population-level single nucleotide polymorphisms (SNPs) and associated genes correlated with vertical transmission efficiency. For low transmitters of AR37, upregulation of perennial ryegrass receptor-like kinases and resistance genes, typically associated with phytopathogen detection, comprised the largest group of differentially expressed genes (DEGs) in both inflorescence primordia and ovaries. DEGs involved in signaling and plant defense responses, such as cell wall modification, secondary metabolism, and reactive oxygen activities were also abundant. Transmission-associated SNPs were associated with genes for which gene ontology analysis identified "response to fungus" as the most significantly enriched term. Moreover, endophyte biomass as measured by quantitative PCR of Epichloë non-ribosomal peptide synthetase genes, was significantly lower in reproductive tissues of low-transmission hosts compared to high-transmission hosts. Endophyte seed-transmission efficiency appears to be influenced primarily by plant defense responses which reduce endophyte colonization of host reproductive tissues.
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Affiliation(s)
- Wei Zhang
- Grasslands Research Centre, AgResearch Limited, Palmerston North, New Zealand
- School of Agriculture and Environment, Massey University, Palmerston North, New Zealand
| | - Natasha T. Forester
- Grasslands Research Centre, AgResearch Limited, Palmerston North, New Zealand
| | - Christina D. Moon
- Grasslands Research Centre, AgResearch Limited, Palmerston North, New Zealand
| | - Paul H. Maclean
- Grasslands Research Centre, AgResearch Limited, Palmerston North, New Zealand
| | - Milan Gagic
- Grasslands Research Centre, AgResearch Limited, Palmerston North, New Zealand
| | - Sai Krishna Arojju
- Grasslands Research Centre, AgResearch Limited, Palmerston North, New Zealand
| | - Stuart D. Card
- Grasslands Research Centre, AgResearch Limited, Palmerston North, New Zealand
| | - Cory Matthew
- School of Agriculture and Environment, Massey University, Palmerston North, New Zealand
| | - Richard D. Johnson
- Grasslands Research Centre, AgResearch Limited, Palmerston North, New Zealand
| | - Linda J. Johnson
- Grasslands Research Centre, AgResearch Limited, Palmerston North, New Zealand
| | - Marty J. Faville
- Grasslands Research Centre, AgResearch Limited, Palmerston North, New Zealand
| | - Christine R. Voisey
- Grasslands Research Centre, AgResearch Limited, Palmerston North, New Zealand
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12
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Middleton SJ, Perini I, Themistocleous AC, Weir GA, McCann K, Barry AM, Marshall A, Lee M, Mayo LM, Bohic M, Baskozos G, Morrison I, Löken LS, McIntyre S, Nagi SS, Staud R, Sehlstedt I, Johnson RD, Wessberg J, Wood JN, Woods CG, Moqrich A, Olausson H, Bennett DL. Nav1.7 is required for normal C-low threshold mechanoreceptor function in humans and mice. Brain 2022; 145:3637-3653. [PMID: 34957475 PMCID: PMC9586547 DOI: 10.1093/brain/awab482] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2021] [Revised: 11/03/2021] [Accepted: 11/24/2021] [Indexed: 11/15/2022] Open
Abstract
Patients with bi-allelic loss of function mutations in the voltage-gated sodium channel Nav1.7 present with congenital insensitivity to pain (CIP), whilst low threshold mechanosensation is reportedly normal. Using psychophysics (n = 6 CIP participants and n = 86 healthy controls) and facial electromyography (n = 3 CIP participants and n = 8 healthy controls), we found that these patients also have abnormalities in the encoding of affective touch, which is mediated by the specialized afferents C-low threshold mechanoreceptors (C-LTMRs). In the mouse, we found that C-LTMRs express high levels of Nav1.7. Genetic loss or selective pharmacological inhibition of Nav1.7 in C-LTMRs resulted in a significant reduction in the total sodium current density, an increased mechanical threshold and reduced sensitivity to non-noxious cooling. The behavioural consequence of loss of Nav1.7 in C-LTMRs in mice was an elevation in the von Frey mechanical threshold and less sensitivity to cooling on a thermal gradient. Nav1.7 is therefore not only essential for normal pain perception but also for normal C-LTMR function, cool sensitivity and affective touch.
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Affiliation(s)
- Steven J Middleton
- Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX3 9DU, UK
| | - Irene Perini
- Center for Social and Affective Neuroscience, Department of Biomedical and Clinical Sciences, Linköping University, Linköping, Sweden
- Center for Medical Image Science and Visualization, Linköping, Sweden
| | - Andreas C Themistocleous
- Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX3 9DU, UK
- Brain Function Research Group, School of Physiology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa
| | - Greg A Weir
- Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX3 9DU, UK
- Institute of Neuroscience and Psychology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK
| | - Kirsty McCann
- Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX3 9DU, UK
| | - Allison M Barry
- Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX3 9DU, UK
| | - Andrew Marshall
- Institute of Aging and Chronic Disease, University of Liverpool, L3 5DA Liverpool, UK
| | - Michael Lee
- University Division of Anaesthesia, University of Cambridge, Cambridge NHS Foundation Trust Hospitals, Hills Road, Cambridge CB2 0QQ, UK
| | - Leah M Mayo
- Center for Social and Affective Neuroscience, Department of Biomedical and Clinical Sciences, Linköping University, Linköping, Sweden
| | - Manon Bohic
- Aix-Marseille-Université, CNRS, Institute de Biologie du Développement de Marseille, UMR 7288, case 907, 13288 Marseille Cedex 09, France
- Department of Cell Biology and Neuroscience, Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA
| | - Georgios Baskozos
- Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX3 9DU, UK
| | - India Morrison
- Center for Social and Affective Neuroscience, Department of Biomedical and Clinical Sciences, Linköping University, Linköping, Sweden
| | - Line S Löken
- Department of Physiology, University of Gothenburg, Gothenburg, Sweden
| | - Sarah McIntyre
- Center for Social and Affective Neuroscience, Department of Biomedical and Clinical Sciences, Linköping University, Linköping, Sweden
| | - Saad S Nagi
- Center for Social and Affective Neuroscience, Department of Biomedical and Clinical Sciences, Linköping University, Linköping, Sweden
| | - Roland Staud
- Department of Physiological Sciences, University of Florida College of Veterinary Medicine, Gainesville, FL, USA
| | - Isac Sehlstedt
- Department of Psychology, University of Gothenburg, Gothenburg, Sweden
| | - Richard D Johnson
- Department of Physiology, University of Gothenburg, Gothenburg, Sweden
- Department of Physiological Sciences, University of Florida College of Veterinary Medicine, Gainesville, FL, USA
| | - Johan Wessberg
- Department of Physiology, University of Gothenburg, Gothenburg, Sweden
| | - John N Wood
- Molecular Nociception Group, Wolfson Institute for Biomedical Research, University College London, Gower Street, London WC1E 6BT, UK
| | - Christopher G Woods
- Cambridge Institute for Medical Research, School of Clinical Medicine, University of Cambridge, Cambridge, UK
| | - Aziz Moqrich
- Aix-Marseille-Université, CNRS, Institute de Biologie du Développement de Marseille, UMR 7288, case 907, 13288 Marseille Cedex 09, France
| | - Håkan Olausson
- Center for Social and Affective Neuroscience, Department of Biomedical and Clinical Sciences, Linköping University, Linköping, Sweden
| | - David L Bennett
- Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX3 9DU, UK
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13
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Lucke-Wold B, Dodd W, Motwani K, Hosaka K, Laurent D, Martinez M, Dugan V, Chalouhi N, Lucke-Wold N, Barpujari A, von Roemeling C, Li C, Johnson RD, Hoh B. Investigation and modulation of interleukin-6 following subarachnoid hemorrhage: targeting inflammatory activation for cerebral vasospasm. J Neuroinflammation 2022; 19:228. [PMID: 36114540 PMCID: PMC9479230 DOI: 10.1186/s12974-022-02592-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Accepted: 09/07/2022] [Indexed: 11/10/2022] Open
Abstract
Abstract
Background
Cerebral vasospasm (CV) can contribute to significant morbidity in subarachnoid hemorrhage (SAH) patients. A key unknown is how CV induction is triggered following SAH.
Methods
Human aneurysmal blood and cerebral spinal fluid were collected for evaluation. To confirm mechanism, c57/bl6 wild type and c57/bl6 IL-6 female knockout (KO) mice were utilized with groups: saline injected, SAH, SAH + IL-6 blockade, SAH IL-6 KO, SAH IL-6 KO + IL-6 administration, SAH + p-STAT3 inhibition. Dual-labeled microglia/myeloid mice were used to show myeloid diapedesis. For SAH, 50 μm blood was collected from tail puncture and administered into basal cisterns. IL-6 blockade was given at various time points. Various markers of neuroinflammation were measured with western blot and immunohistochemistry. Cerebral blood flow was also measured. Vasospasm was measured via cardiac injection of India ink/gelatin. Turning test and Garcia’s modified SAH score were utilized. P < 0.05 was considered significant.
Results
IL-6 expression peaked 3 days following SAH (p < 0.05). Human IL-6 was increased in aneurysmal blood (p < 0.05) and in cerebral spinal fluid (p < 0.01). Receptor upregulation was periventricular and perivascular. Microglia activation following SAH resulted in increased caveolin 3 and myeloid diapedesis. A significant increase in BBB markers endothelin 1 and occludin was noted following SAH, but reduced with IL-6 blockade (p < 0.01). CV occurred 5 days post-SAH, but was absent in IL-6 KO mice and mitigated with IL-6 blockade (p < 0.05). IL-6 blockade, and IL-6 KO mitigated effects of SAH on cerebral blood flow (p < 0.05). SAH mice had impaired performance on turn test and poor modified Garcia scores compared to saline and IL-6 blockade. A distinct microglia phenotype was noted day 5 in the SAH group (overlap coefficients r = 0.96 and r = 0.94) for Arg1 and iNOS, which was altered by IL-6 blockade. Day 7, a significant increase in toll-like receptor 4 and Stat3 was noted. This was mitigated by IL-6 blockade and IL-6 KO, which also reduced Caspase 3 (p < 0.05). To confirm the mechanism, we developed a p-STAT3 inhibitor that targets the IL-6 pathway and this reduced NFΚB, TLR4, and nitrotyrosine (p < 0.001). Ventricular dilation and increased Tunel positivity was noted day 9, but resolved by IL-6 blockade (p < 0.05).
Conclusion
Correlation between IL-6 and CV has been well documented. We show that a mechanistic connection exists via the p-STAT3 pathway, and IL-6 blockade provides benefit in reducing CV and its consequences mediated by myeloid cell origin diapedesis.
Graphical abstract
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14
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Miller TA, Hudson DA, Johnson RD, Singh JS, Mace WJ, Forester NT, Maclean PH, Voisey CR, Johnson LJ. Dissection of the epoxyjanthitrem pathway in Epichloë sp. LpTG-3 strain AR37 by CRISPR gene editing. Front Fungal Biol 2022; 3:944234. [PMID: 37746172 PMCID: PMC10512260 DOI: 10.3389/ffunb.2022.944234] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/14/2022] [Accepted: 07/18/2022] [Indexed: 09/26/2023]
Abstract
Epichloë festucae var. lolii and Epichloë sp. LpTG-3 are filamentous fungal endophytes of perennial ryegrass (Lolium perenne) that have a substantial impact on New Zealand's agricultural economy by conferring biotic advantages to the host grass. Overall, Epichloë endophytes contribute NZ$200 million to the economy annually, with strain AR37 estimated to contribute NZ$3.6 billion to the New Zealand economy over a 20-year period. This strain produces secondary metabolites, including epoxyjanthitrems, which are a class of indole diterpenes, associated with the observed effects of AR37 on livestock and insect pests. Until very recently, AR37 was intractable to genetic modification but this has changed with the application of CRISPR-Cas9 based gene editing techniques. In this paper, gene inactivation by CRISPR-Cas9 was used to deconvolute the genetic basis for epoxyjanthitrem biosynthesis, including creating an AR37 strain that has been edited to remove the biosynthesis of all indole diterpenes. We show that gene editing of Epichloë can be achieved without off-target events or introduction of foreign DNA (footprint-less) through an AMA1-based plasmid that simultaneously expresses the CRISPR-Cas9 system and selectable marker. Genetic modification events in these transformants were investigated through genome sequencing and in planta chemistry.
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Affiliation(s)
| | | | | | | | | | | | | | | | - Linda J. Johnson
- Grasslands Research Centre, AgResearch, Palmerston North, New Zealand
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15
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Liu Q, Johnson LJ, Applegate ER, Arfmann K, Jauregui R, Larking A, Mace WJ, Maclean P, Walker T, Johnson RD. Identification of Genetic Diversity, Pyrrocidine-Producing Strains and Transmission Modes of Endophytic Sarocladium zeae Fungi from Zea Crops. Microorganisms 2022; 10:microorganisms10071415. [PMID: 35889134 PMCID: PMC9316807 DOI: 10.3390/microorganisms10071415] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2022] [Revised: 07/12/2022] [Accepted: 07/12/2022] [Indexed: 12/10/2022] Open
Abstract
Genotyping by sequencing (GBS) was used to reveal the inherent genetic variation within the haploid fungi Sarocladium zeae isolated from diverse Zea germplasm, including modern Zea mays and its wild progenitors—the teosintes. In accordance with broad host relationship parameters, GBS analysis revealed significant host lineages of S. zeae genetic diversity, indicating that S. zeae genetic variation may associate with different evolutionary histories of host species or varieties. Based on a recently identified PKS-NRPS gene responsible for pyrrocidine biosynthesis in S. zeae fungi, a novel PCR assay was developed to discriminate pyrrocidine-producing S. zeae strains. This molecular method for screening bioactive strains of S. zeae is complementary to other approaches, such as chemical analyses. An eGFP-labelled S. zeae strain was also developed to investigate the endophytic transmission of S. zeae in Z. mays seedlings, which has further improved our understanding of the transmission modes of S. zeae endophytes in maize tissues.
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16
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Bastías DA, Gundel PE, Johnson RD, Gianoli E. How and when fungal endophytes can eliminate the plant growth-defence trade-off: mechanistic perspectives. New Phytol 2022; 235:388-390. [PMID: 35548876 PMCID: PMC9321058 DOI: 10.1111/nph.18161] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/20/2022] [Accepted: 04/08/2022] [Indexed: 06/15/2023]
Affiliation(s)
- Daniel A. Bastías
- AgResearch LimitedGrasslands Research CentrePalmerston North4442New Zealand
| | - Pedro E. Gundel
- Facultad de AgronomíaIFEVAUniversidad de Buenos Aires, CONICETBuenos AiresC1417DSEArgentina
- Laboratorio de Biología VegetalInstituto de Ciencias BiológicasUniversidad de TalcaCampus LircayTalca3480094Chile
| | - Richard D. Johnson
- AgResearch LimitedGrasslands Research CentrePalmerston North4442New Zealand
| | - Ernesto Gianoli
- Departamento de BiologíaUniversidad de La SerenaCasilla 554La Serena1700000Chile
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17
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Berry D, Lee K, Winter D, Mace W, Becker Y, Nagabhyru P, Treindl AD, Bogantes EV, Young CA, Leuchtmann A, Johnson LJ, Johnson RD, Cox MP, Schardl CL, Scott B. Cross-species transcriptomics identifies core regulatory changes differentiating the asymptomatic asexual and virulent sexual life cycles of grass-symbiotic Epichloë fungi. G3 (Bethesda) 2022; 12:jkac043. [PMID: 35191483 PMCID: PMC8982410 DOI: 10.1093/g3journal/jkac043] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/21/2021] [Accepted: 02/07/2022] [Indexed: 02/04/2023]
Abstract
Fungi from the genus Epichloë form systemic endobiotic infections of cool season grasses, producing a range of host-protective natural products in return for access to nutrients. These infections are asymptomatic during vegetative host growth, with associations between asexual Epichloë spp. and their hosts considered mutualistic. However, the sexual cycle of Epichloë spp. involves virulent growth, characterized by the envelopment and sterilization of a developing host inflorescence by a dense sheath of mycelia known as a stroma. Microscopic analysis of stromata revealed a dramatic increase in hyphal propagation and host degradation compared with asymptomatic tissues. RNAseq was used to identify differentially expressed genes in asymptomatic vs stromatized tissues from 3 diverse Epichloë-host associations. Comparative analysis identified a core set of 135 differentially expressed genes that exhibited conserved transcriptional changes across all 3 associations. The core differentially expressed genes more strongly expressed during virulent growth encode proteins associated with host suppression, digestion, adaptation to the external environment, a biosynthetic gene cluster, and 5 transcription factors that may regulate Epichloë stroma formation. An additional 5 transcription factor encoding differentially expressed genes were suppressed during virulent growth, suggesting they regulate mutualistic processes. Expression of biosynthetic gene clusters for natural products that suppress herbivory was universally suppressed during virulent growth, and additional biosynthetic gene clusters that may encode production of novel host-protective natural products were identified. A comparative analysis of 26 Epichloë genomes found a general decrease in core differentially expressed gene conservation among asexual species, and a specific decrease in conservation for the biosynthetic gene cluster expressed during virulent growth and an unusual uncharacterized gene.
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Affiliation(s)
- Daniel Berry
- Institute of Fundamental Sciences, Massey University, Palmerston North 4442, New Zealand
| | - Kate Lee
- Institute of Fundamental Sciences, Massey University, Palmerston North 4442, New Zealand
| | - David Winter
- Institute of Fundamental Sciences, Massey University, Palmerston North 4442, New Zealand
| | - Wade Mace
- AgResearch Ltd, Grasslands Research Centre, Palmerston North 4442, New Zealand
| | - Yvonne Becker
- Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn Institute, Federal Research Centre for Cultivated Plants, 38104 Braunschweig, Germany
| | - Padmaja Nagabhyru
- Department of Plant Pathology, University of Kentucky, Lexington, KY 40546, USA
| | - Artemis D Treindl
- Institute of Integrative Biology, ETH Zurich, 8092 Zürich, Switzerland
| | | | | | - Adrian Leuchtmann
- Institute of Integrative Biology, ETH Zurich, 8092 Zürich, Switzerland
| | | | | | - Murray P Cox
- Institute of Fundamental Sciences, Massey University, Palmerston North 4442, New Zealand
| | | | - Barry Scott
- Institute of Fundamental Sciences, Massey University, Palmerston North 4442, New Zealand
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18
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Maselli D, Matos RS, Johnson RD, Chiappini C, Camelliti P, Campagnolo P. Epicardial slices: an innovative 3D organotypic model to study epicardial cell physiology and activation. NPJ Regen Med 2022; 7:7. [PMID: 35039552 PMCID: PMC8764051 DOI: 10.1038/s41536-021-00202-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2021] [Accepted: 11/30/2021] [Indexed: 11/26/2022] Open
Abstract
The epicardium constitutes an untapped reservoir for cardiac regeneration. Upon heart injury, the adult epicardium re-activates, leading to epithelial-to-mesenchymal transition (EMT), migration, and differentiation. While interesting mechanistic and therapeutic findings arose from lower vertebrates and rodent models, the introduction of an experimental system representative of large mammals would undoubtedly facilitate translational advancements. Here, we apply innovative protocols to obtain living 3D organotypic epicardial slices from porcine hearts, encompassing the epicardial/myocardial interface. In culture, our slices preserve the in vivo architecture and functionality, presenting a continuous epicardium overlaying a healthy and connected myocardium. Upon thymosin β4 treatment of the slices, the epicardial cells become activated, upregulating epicardial and EMT genes, resulting in epicardial cell mobilization and differentiation into epicardial-derived mesenchymal cells. Our 3D organotypic model enables to investigate the reparative potential of the adult epicardium, offering an advanced tool to explore ex vivo the complex 3D interactions occurring within the native heart environment.
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Affiliation(s)
- D Maselli
- Faculty of Health & Medical Sciences, School of Biosciences & Medicine, Section of Cardiovascular Sciences, University of Surrey, Guildford, GU2 7XH, UK
| | - R S Matos
- Faculty of Health & Medical Sciences, School of Biosciences & Medicine, Section of Cardiovascular Sciences, University of Surrey, Guildford, GU2 7XH, UK
| | - R D Johnson
- Faculty of Health & Medical Sciences, School of Biosciences & Medicine, Section of Cardiovascular Sciences, University of Surrey, Guildford, GU2 7XH, UK
| | - C Chiappini
- Centre for Craniofacial and Regenerative Biology, King's College London, SE1 9RT, London, United Kingdom
| | - P Camelliti
- Faculty of Health & Medical Sciences, School of Biosciences & Medicine, Section of Cardiovascular Sciences, University of Surrey, Guildford, GU2 7XH, UK
| | - P Campagnolo
- Faculty of Health & Medical Sciences, School of Biosciences & Medicine, Section of Cardiovascular Sciences, University of Surrey, Guildford, GU2 7XH, UK.
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19
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Roodi D, Millner JP, McGill CR, Johnson RD, Hea SY, Brookes JJ, Glare TR, Card SD. Development of Plant-Fungal Endophyte Associations to Suppress Phoma Stem Canker in Brassica. Microorganisms 2021; 9:microorganisms9112387. [PMID: 34835512 PMCID: PMC8620040 DOI: 10.3390/microorganisms9112387] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Revised: 11/17/2021] [Accepted: 11/18/2021] [Indexed: 11/29/2022] Open
Abstract
Endophytic microorganisms are found within the tissues of many plants species, with some conferring several benefits to the host plant including resistance to plant diseases. In this study, two putative endophytic fungi that were previously isolated from wild seeds of Brassica, identified as Beauveria bassiana and Pseudogymnoascus pannorum, were inoculated into cultivars of three Brassica species—Brassica napus, Br. rapa and Br. oleracea. Both fungal endophytes were reisolated from above- and below-ground tissues of inoculated plants at four different plant-growth stages, including cotyledon, one-leaf, two-leaf, and four-leaf stages. None of the plants colonised by these fungi exhibited any obvious disease symptoms, indicating the formation of novel mutualistic associations. These novel plant–endophyte associations formed between Brassica plants and Be. bassiana significantly inhibited phoma stem canker, a devastating disease of Brassica crops worldwide, caused by the fungal pathogen Leptosphaeria maculans. The novel association formed with P. pannorum significantly suppressed the amount of disease caused by L. maculans in one out of two experiments. Although biological control is not a new strategy, endophytic fungi with both antiinsect and antifungal activity are a highly conceivable, sustainable option to manage pests and diseases of economically important crops.
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Affiliation(s)
- Davood Roodi
- Resilient Agriculture, AgResearch Limited, Grasslands Research Centre, Private Bag 11008, Palmerston North 4410, New Zealand; (D.R.); (R.D.J.)
- School of Agriculture & Environment, Massey University, Private Bag 11222, Palmerston North 4442, New Zealand; (J.P.M.); (C.R.M.)
- Khorasan Razavi Agricultural and Natural Resources Research and Education Center, Agricultural Research, Education and Extension Organization (AREEO), Mashhad 91769-83641, Iran
| | - James P. Millner
- School of Agriculture & Environment, Massey University, Private Bag 11222, Palmerston North 4442, New Zealand; (J.P.M.); (C.R.M.)
| | - Craig R. McGill
- School of Agriculture & Environment, Massey University, Private Bag 11222, Palmerston North 4442, New Zealand; (J.P.M.); (C.R.M.)
| | - Richard D. Johnson
- Resilient Agriculture, AgResearch Limited, Grasslands Research Centre, Private Bag 11008, Palmerston North 4410, New Zealand; (D.R.); (R.D.J.)
| | - Shen-Yan Hea
- Digital Agriculture, AgResearch Limited, Invermay Agricultural Centre, Private Bag 50034, Mosgiel 9053, New Zealand;
| | - Jenny J. Brookes
- Bio-Protection Research Centre, P.O. Box 85084, Lincoln University, Lincoln 7647, New Zealand; (J.J.B.); (T.R.G.)
| | - Travis R. Glare
- Bio-Protection Research Centre, P.O. Box 85084, Lincoln University, Lincoln 7647, New Zealand; (J.J.B.); (T.R.G.)
| | - Stuart D. Card
- Resilient Agriculture, AgResearch Limited, Grasslands Research Centre, Private Bag 11008, Palmerston North 4410, New Zealand; (D.R.); (R.D.J.)
- Correspondence:
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Abstract
This study develops and empirically examines a model of voluntary employee self-development behaviours and presents a unique lens for the study of self-development behaviours that integrates the disparate social exchange and motivational models currently applied in the management and training motivation literature. Specifically, the current model utilizes the Theory of Planned Behavior (TPB) as a guiding framework in the combination and expansion of these streams to create an integrated model. This model was validated using a survey of 203 employees. Structural Equation Modelling (SEM) was used to analyse the data. The results indicated support for nine out of eleven theorized relationships in the model, and the new model explained more variance in self-development behaviours (38%) than either lens: the social exchange (8.5%) or the motivational (19%). Thus, the results indicate there is important value in integrating the lenses. Implications for research and practice are also discussed.
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Affiliation(s)
| | - Richard D. Johnson
- Carson College of Business, Washington State University, Pullman, WA, USA
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21
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Rahnama M, Fleetwood DJ, Johnson RD. Histological Methods to Detect Early-stage Plant Defense Responses during Artificial Inoculation of Lolium perenne with Epichloë festucae. Bio Protoc 2021; 11:e4013. [PMID: 34124312 PMCID: PMC8161103 DOI: 10.21769/bioprotoc.4013] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2020] [Revised: 02/19/2021] [Accepted: 02/24/2021] [Indexed: 12/31/2022] Open
Abstract
Epichloë species form agriculturally important symbioses with many cool season grasses. To study these symbioses, such as the interaction of Epichloë festucae with perennial ryegrass (Lolium perenne), host plants can be infected by artificial inoculation of etiolated seedlings. This inoculation is performed by placing mycelium into an incision in the meristem, as previously described by Latch and Christensen (1985). In recent years, this method has been broadly used to study this interaction at the molecular level using different Epichloë festucae mutants that can cause incompatible interactions. We have developed and adapted methods to study four of the most important host plant responses to infection, including cell death, callose deposition, lignin production, and hydrogen peroxide (H2O2) production, which are useful in defining the host response to infection at a very early time point.
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Affiliation(s)
- Mostafa Rahnama
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
- School of Biological Sciences, University of Auckland, New Zealand
| | - Damien J. Fleetwood
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
- Biotelliga Ltd, Auckland, New Zealand
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22
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Zhou L, Li C, White JF, Johnson RD. Synergism between calcium nitrate applications and fungal endophytes to increase sugar concentration in Festuca sinensis under cold stress. PeerJ 2021; 9:e10568. [PMID: 35070512 PMCID: PMC8759379 DOI: 10.7717/peerj.10568] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2020] [Accepted: 11/23/2020] [Indexed: 11/20/2022] Open
Abstract
Epichloë endophytes have been shown to increase tolerance to biotic and abiotic stresses in many cool-season grasses. We investigated the impact of endophyte infection of Festuca sinensis, on root metabolic activity, photosynthetic pigments, leaf relative water content (RWC) and soluble carbohydrates in a field experiment carried out during chilling and irrigation with Ca(NO3)2. A highly significant (P < 0.001) correlation for Epichloë endophytes was observed for root metabolic activity. Ca(NO3)2 affected very significantly root metabolic activity and total chlorophyll (P < 0.001). Low temperature led to highly significant (P < 0.001) reductions in root metabolic activity, RWC, total chlorophyll, chlorophyll a/b ratio, and carotenoid contents. In addition, the fructose concentrations of shoots were greater on the 14th day than on the 28th day and before treatment, whilst the glucose concentration of roots was much higher on the 28th day than before and after 14 days treatment. Moreover, our results indicated that the addition of calcium nitrate contributed to higher levels of total chlorophylls, soluble sugars, sucrose, fructose or glucose in the shoots and roots in both E+ and E- plants during long periods of chilling. These results suggest that Epichloë endophyte infection and/or exogenous calcium nitrate can confer better tolerance to cold stress.
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Affiliation(s)
- Lianyu Zhou
- State Key Laboratory of Grassland Agro-ecosystems; Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs; Engineering Research Center of Grassland Industry, Ministry of Education; Gansu Tech Innovation Centre, Lanzhou University, Lanzhou, Gansu, China
- Key Laboratory of Medicinal Plant and Animal Resources of the Qinghai-Tibetan Plateau, School of Life Science, Qinghai Normal University, Xining, Qinghai, China
| | - Chunjie Li
- State Key Laboratory of Grassland Agro-ecosystems; Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs; Engineering Research Center of Grassland Industry, Ministry of Education; Gansu Tech Innovation Centre, Lanzhou University, Lanzhou, Gansu, China
| | - James F. White
- Department of Plant Biology, Rutgers University, New Brunswick, NJ, United States of America
| | - Richard D. Johnson
- Grasslands Research Centre, AgResearch Limited, Palmerston North, New Zealand
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23
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Griffiths LJ, Johnson RD, Broadhurst K, Bedston S, Cusworth L, Alrouh B, Ford DV, John A. Maternal health, pregnancy and birth outcomes for women involved in care proceedings in Wales: a linked data study. BMC Pregnancy Childbirth 2020; 20:697. [PMID: 33198668 PMCID: PMC7667744 DOI: 10.1186/s12884-020-03370-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Accepted: 10/28/2020] [Indexed: 01/16/2023] Open
Abstract
BACKGROUND Under the Children Act 1989, local authorities in Wales, UK, can issue care proceedings if they are concerned about the welfare of a child, which can lead to removal of a child from parents. For mothers at risk of child removal, timely intervention during pregnancy may avert the need for this and improve maternal/fetal health; however, little is known about this specific population during the antenatal period. The study examined maternity characteristics of mothers whose infants were subject to care proceedings, with the aim of informing preventative interventions targeted at high risk mothers. METHODS Anonymised administrative data from Cafcass Cymru, who provide child-focused advice and support for family court proceedings in Wales, were linked to population-based maternity and health records held within the Secure Anonymised Information Linkage Databank. Linked data were available for 1111 birth mothers of infants involved in care proceedings between 2015 and 2018. Findings were benchmarked with reference to an age-deprivation-matched comparison group (n = 23,414), not subject to care proceedings but accessing maternity services during this period. Demographic characteristics, maternal health, reproductive history, interaction with midwifery services, and pregnancy and birth outcomes were examined. Descriptive and statistical tests of independence were used. RESULTS Half of the women in the cohort (49.4%) resided in the most deprived areas. They were more likely to be younger at entry to motherhood (63.5% < 21 years-of-age compared to 42.7% in the comparison group), to have mental health (28.6% compared to 8.2%) and substance use issues (10.4% compared to 0.6%) and to smoke (62.7% compared to 24.8%) during pregnancy. The majority first engaged with maternity services within their first trimester of pregnancy (63.5% compared to 84.4%). Babies were more likely to be born preterm (14.2% compared to 6.7%) and, for full-term babies, to have low birthweights (8.0% compared to 2.8%). CONCLUSION This novel linkage study highlights multiple vulnerabilities experienced by pregnant mothers who have experienced care proceedings concerning an infant. Policy and practice colleagues require a clearer picture of women's needs if child protection and health services are to offer effective services which prevent the need for family court proceedings and infant removal.
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Affiliation(s)
- L J Griffiths
- Population Data Science, Swansea University Medical School, Swansea, SA2 8PP, UK.
| | - R D Johnson
- Population Data Science, Swansea University Medical School, Swansea, SA2 8PP, UK
| | - K Broadhurst
- Centre for Child & Family Justice Research, Lancaster University, Lancaster, LA1 4YW, UK
| | - S Bedston
- Centre for Child & Family Justice Research, Lancaster University, Lancaster, LA1 4YW, UK
| | - L Cusworth
- Centre for Child & Family Justice Research, Lancaster University, Lancaster, LA1 4YW, UK
| | - B Alrouh
- Centre for Child & Family Justice Research, Lancaster University, Lancaster, LA1 4YW, UK
| | - D V Ford
- Population Data Science, Swansea University Medical School, Swansea, SA2 8PP, UK
| | - A John
- Population Data Science, Swansea University Medical School, Swansea, SA2 8PP, UK
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24
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Nan T, Quintela CX, Irwin J, Gurung G, Shao DF, Gibbons J, Campbell N, Song K, Choi SY, Guo L, Johnson RD, Manuel P, Chopdekar RV, Hallsteinsen I, Tybell T, Ryan PJ, Kim JW, Choi Y, Radaelli PG, Ralph DC, Tsymbal EY, Rzchowski MS, Eom CB. Controlling spin current polarization through non-collinear antiferromagnetism. Nat Commun 2020; 11:4671. [PMID: 32938910 PMCID: PMC7494910 DOI: 10.1038/s41467-020-17999-4] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2020] [Accepted: 07/22/2020] [Indexed: 11/09/2022] Open
Abstract
The interconversion of charge and spin currents via spin-Hall effect is essential for spintronics. Energy-efficient and deterministic switching of magnetization can be achieved when spin polarizations of these spin currents are collinear with the magnetization. However, symmetry conditions generally restrict spin polarizations to be orthogonal to both the charge and spin flows. Spin polarizations can deviate from such direction in nonmagnetic materials only when the crystalline symmetry is reduced. Here, we show control of the spin polarization direction by using a non-collinear antiferromagnet Mn3GaN, in which the triangular spin structure creates a low magnetic symmetry while maintaining a high crystalline symmetry. We demonstrate that epitaxial Mn3GaN/permalloy heterostructures can generate unconventional spin-orbit torques at room temperature corresponding to out-of-plane and Dresselhaus-like spin polarizations which are forbidden in any sample with two-fold rotational symmetry. Our results demonstrate an approach based on spin-structure design for controlling spin-orbit torque, enabling high-efficient antiferromagnetic spintronics. In the typical spin-hall effect, spin-current, charge current, and spin polarisation are all mutually perpendicular, a feature enforced by symmetry. Here, using an anti-ferromagnet with a triangular spin structure, the authors demonstrate a spin-hall effect without a perpendicular spin alignment.
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Affiliation(s)
- T Nan
- Department of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - C X Quintela
- Department of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - J Irwin
- Department of Physics, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - G Gurung
- Department of Physics and Astronomy & Nebraska Center for Materials and Nanoscience, University of Nebraska, Lincoln, NE, 68588, USA
| | - D F Shao
- Department of Physics and Astronomy & Nebraska Center for Materials and Nanoscience, University of Nebraska, Lincoln, NE, 68588, USA
| | - J Gibbons
- Laboratory of Atomic and Solid State Physics, Cornell University, Ithaca, NY, 14853, USA
| | - N Campbell
- Department of Physics, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - K Song
- Department of Materials Modeling and Characterization, KIMS, Changwon, 51508, South Korea
| | - S -Y Choi
- Department of Materials Science and Engineering, POSTECH, Pohang, 37673, South Korea
| | - L Guo
- Department of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - R D Johnson
- Clarendon Laboratory, Department of Physics, University of Oxford, Parks Road, Oxford, OX1 3PU, UK.,ISIS Facility, Rutherford Appleton Laboratory, Chilton, Didcot, OX11 0QX, UK.,Department of Physics and Astronomy, University College London, Gower Street, London, WC1E 6BT, UK
| | - P Manuel
- Department of Physics and Astronomy, University College London, Gower Street, London, WC1E 6BT, UK
| | - R V Chopdekar
- Advanced Light Source, Lawrence Berkeley National Laboratory (LBNL), 1 Cyclotron Road, Berkeley, CA, 94720, USA
| | - I Hallsteinsen
- Advanced Light Source, Lawrence Berkeley National Laboratory (LBNL), 1 Cyclotron Road, Berkeley, CA, 94720, USA.,Department of Electronic Systems, Norwegian University of Science and Technology, Trondheim, 7491, Norway
| | - T Tybell
- Department of Electronic Systems, Norwegian University of Science and Technology, Trondheim, 7491, Norway
| | - P J Ryan
- Advanced Photon Source, Argonne National Laboratory, Argonne, IL, 60439, USA.,School of Physical Sciences, Dublin City University, Dublin, 11, Ireland
| | - J -W Kim
- Advanced Photon Source, Argonne National Laboratory, Argonne, IL, 60439, USA
| | - Y Choi
- Advanced Photon Source, Argonne National Laboratory, Argonne, IL, 60439, USA
| | - P G Radaelli
- Clarendon Laboratory, Department of Physics, University of Oxford, Parks Road, Oxford, OX1 3PU, UK
| | - D C Ralph
- Laboratory of Atomic and Solid State Physics, Cornell University, Ithaca, NY, 14853, USA.,Kavli Institute at Cornell for Nanoscale Science, Ithaca, NY, 14853, USA
| | - E Y Tsymbal
- Department of Physics and Astronomy & Nebraska Center for Materials and Nanoscience, University of Nebraska, Lincoln, NE, 68588, USA
| | - M S Rzchowski
- Department of Physics, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - C B Eom
- Department of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, 53706, USA.
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25
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Johnson RD, Khalyavin DD, Manuel P, Zhang L, Yamaura K, Belik AA. Emergence of a Magnetostructural Dipolar Glass in the Quadruple Perovskite Dy_{1-δ}Mn_{7+δ}O_{12}. Phys Rev Lett 2020; 125:097601. [PMID: 32915605 DOI: 10.1103/physrevlett.125.097601] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2020] [Revised: 05/15/2020] [Accepted: 07/28/2020] [Indexed: 06/11/2023]
Abstract
We show that a polar, pseudo-Jahn-Teller instability exists for the underbonded rare-earth A-site cations in the quadruple perovskite Dy_{1-δ}Mn_{7+δ}O_{12}, which leads to the spontaneous formation of a dipolar glass. This observation alone expands the applicability of pseudo-Jahn-Teller physics in perovskite-derived materials, for which it is typically confined to B-site cations. We demonstrate that the dipolar glass order parameter is coupled to a ferrimagnetic order parameter via strain, leading to a first order magnetostructural phase transition that can be tuned by magnetic field. This phenomenology may emerge in a broad range of perovskite-derived materials in which A-site cation ordering and octahedral tilting are mutually tied to meet the criteria of structural stability.
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Affiliation(s)
- R D Johnson
- Department of Physics and Astronomy, University College London, Gower Street, London WC1E 6BT, United Kingdom
| | - D D Khalyavin
- ISIS facility, Rutherford Appleton Laboratory-STFC, Chilton, Didcot OX11 0QX, United Kingdom
| | - P Manuel
- ISIS facility, Rutherford Appleton Laboratory-STFC, Chilton, Didcot OX11 0QX, United Kingdom
| | - L Zhang
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
- Graduate School of Chemical Sciences and Engineering, Hokkaido University, North 10 West 8, Kita-ku, Sapporo, Hokkaido 060-0810, Japan
| | - K Yamaura
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
- Graduate School of Chemical Sciences and Engineering, Hokkaido University, North 10 West 8, Kita-ku, Sapporo, Hokkaido 060-0810, Japan
| | - A A Belik
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
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Roodi D, Millner JP, McGill C, Johnson RD, Jauregui R, Card SD. Methylobacterium, a major component of the culturable bacterial endophyte community of wild Brassica seed. PeerJ 2020; 8:e9514. [PMID: 32728495 PMCID: PMC7357558 DOI: 10.7717/peerj.9514] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2020] [Accepted: 06/18/2020] [Indexed: 01/14/2023] Open
Abstract
BACKGROUND Plants are commonly colonized by a wide diversity of microbial species and the relationships created can range from mutualistic through to parasitic. Microorganisms that typically form symptomless associations with internal plant tissues are termed endophytes. Endophytes associate with most plant species found in natural and managed ecosystems. They are extremely important plant partners that provide improved stress tolerance to the host compared with plants that lack this symbiosis. Plant domestication has reduced endophyte diversity and therefore the wild relatives of many crop species remain untapped reservoirs of beneficial microbes. Brassica species display immense diversity and consequently provide the greatest assortment of products used by humans from a single plant genus important for agriculture, horticulture, bioremediation, medicine, soil conditioners, composting crops, and in the production of edible and industrial oils. Many endophytes are horizontally transmitted, but some can colonize the plant's reproductive tissues, and this gives these symbionts an efficient mechanism of propagation via plant seed (termed vertical transmission). METHODS This study surveyed 83 wild and landrace Brassica accessions composed of 14 different species with a worldwide distribution for seed-originating bacterial endophytes. Seed was stringently disinfected, sown within sterile tissue culture pots within a sterile environment and incubated. After approximately 1-month, direct isolation techniques were used to recover bacterial endophytes from roots and shoots of symptomless plants. Bacteria were identified based on the PCR amplification of partial 16S rDNA gene sequences and annotated using the BLASTn program against the NCBI rRNA database. A diversity index was used as a quantitative measure to reflect how many different bacterial species there were in the seed-originating microbial community of the Brassica accessions sampled. RESULTS Bacterial endophytes were recovered from the majority of the Brassica accessions screened. 16S rDNA gene sequencing identified 19 different bacterial species belonging to three phyla, namely Actinobacteria, Firmicutes and Proteobacteria with the most frequently isolated species being Methylobacterium fujisawaense, Stenotrophomonas rhizophila and Pseudomonas lactis. Methylobacterium was the dominant genus composing 56% of the culturable isolated bacterial community and was common in 77% of accessions possessing culturable bacterial endophytes. Two selected isolates of Methylobacterium significantly promoted plant growth when inoculated into a cultivar of oilseed rape and inhibited the growth of the pathogen Leptosphaeria maculans in dual culture. This is the first report that investigates the seed-originating endophytic microorganisms of wild Brassica species and highlights the Brassica microbiome as a resource for plant growth promoting bacteria and biological control agents.
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Affiliation(s)
- Davood Roodi
- School of Agriculture & Environment, Massey University, Palmerston North, Manawatu, New Zealand
- Agricultural Research, Education and Extension Organization (AREEO), Seed and Plant Improvement Institute, Karaj, Alborz, Iran
- Forage Science, AgResearch Limited, Grasslands Research Centre, Palmerston North, Manawatu, New Zealand
| | - James P Millner
- School of Agriculture & Environment, Massey University, Palmerston North, Manawatu, New Zealand
| | - Craig McGill
- School of Agriculture & Environment, Massey University, Palmerston North, Manawatu, New Zealand
| | - Richard D Johnson
- Forage Science, AgResearch Limited, Grasslands Research Centre, Palmerston North, Manawatu, New Zealand
| | - Ruy Jauregui
- Knowledge & Analytics, AgResearch Limited, Grasslands Research Centre, Palmerston North, Manawatu, New Zealand
| | - Stuart D Card
- Forage Science, AgResearch Limited, Grasslands Research Centre, Palmerston North, Manawatu, New Zealand
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Dirr EW, Urdaneta ME, Patel Y, Johnson RD, Campbell-Thompson M, Otto KJ. Designing a bioelectronic treatment for Type 1 diabetes: targeted parasympathetic modulation of insulin secretion. Bioelectron Med (Lond) 2020; 3:17-31. [PMID: 33169091 PMCID: PMC7604671 DOI: 10.2217/bem-2020-0006] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2020] [Accepted: 06/29/2020] [Indexed: 12/31/2022]
Abstract
The pancreas is a visceral organ with exocrine functions for digestion and endocrine functions for maintenance of blood glucose homeostasis. In pancreatic diseases such as Type 1 diabetes, islets of the endocrine pancreas become dysfunctional and normal regulation of blood glucose concentration ceases. In healthy individuals, parasympathetic signaling to islets via the vagus nerve, triggers release of insulin from pancreatic β-cells and glucagon from α-cells. Using electrical stimulation to augment parasympathetic signaling may provide a way to control pancreatic endocrine functions and ultimately control blood glucose. Historical data suggest that cervical vagus nerve stimulation recruits many visceral organ systems. Simultaneous modulation of liver and digestive function along with pancreatic function provides differential signals that work to both raise and lower blood glucose. Targeted pancreatic vagus nerve stimulation may provide a solution to minimizing off-target effects through careful electrode placement just prior to pancreatic insertion.
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Affiliation(s)
- Elliott W Dirr
- J. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, Gainesville, FL 32611, USA
| | - Morgan E Urdaneta
- Department of Neuroscience, University of Florida, Gainesville, FL 32611, USA
| | - Yogi Patel
- Department of Biomedical Engineering, Georgia Institute of Technology University of Florida, Gainesville, FL 32611, USA
| | - Richard D Johnson
- Department of Neuroscience, University of Florida, Gainesville, FL 32611, USA
- Department of Physiological Sciences, University of Florida, Gainesville, FL 32611, USA
| | - Martha Campbell-Thompson
- J. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, Gainesville, FL 32611, USA
- Department of Pathology, Immunology, & Laboratory Medicine University of Florida, Gainesville, FL 32611, USA
| | - Kevin J Otto
- J. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, Gainesville, FL 32611, USA
- Department of Neuroscience, University of Florida, Gainesville, FL 32611, USA
- Department of Neurology, University of Florida, Gainesville, FL 32611, USA
- Department of Materials Science & Engineering, University of Florida, Gainesville, FL 32611, USA
- Department of Electrical & Computer Engineering, University of Florida, Gainesville, FL 32611, USA
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28
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Johnson RD, Ford DV, Broadhurst K, Cusworth L, Jones KH, Akbari A, Bedston S, Alrouh B, Doebler S, Lee A, Smart J, Thompson S, Trinder L, Griffiths LJ. Data Resource: population level family justice administrative data with opportunities for data linkage. Int J Popul Data Sci 2020; 5:1339. [PMID: 34233348 PMCID: PMC7473282 DOI: 10.23889/ijpds.v5i1.1339] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022] Open
Abstract
INTRODUCTION Although there has been considerable progress in the use of administrative data for applied health research, the family justice field lags behind. Better use of administrative data are essential to enhance understanding of how the family justice system is working, as well as the characteristics of, and outcomes for, children and families. The Family Justice Data Partnership (FJDP) supports this aim through analyses of core family justice and linked datasets in the SAIL Databank (Secure Anonymised Information Linkage). Cafcass Cymru provide expert advice for children involved in family court proceedings in Wales, ensuring decisions are made in the best interests of the child. We provide an overview of Cafcass Cymru data. We also describe and illustrate linkage to administrative datasets within SAIL. METHODS Cafcass Cymru data was transferred to SAIL using a standardised approach to provide de-identified data with Anonymised Linking Fields (ALF) for successfully matched records. Three cohorts were created: all individuals involved in family court applications; all individuals with an ALF allowing subsequent health data linkage; and all individuals with a Residential Anonymised Linking Field (RALF) enabling area-level deprivation analysis. RESULTS Cafcass Cymru application data are available for child protection matters (public law, range 2011-2019, n=12,745), and child arrangement disputes (private law, range 2005-2019, n=52,023). An 80% data linkage match rate was achieved. 40% had hospital admissions within two years pre or post application; 54% had emergency department attendances and 61% had outpatient appointments. Individuals were more likely to reside in deprived areas regardless of law type. CONCLUSION Cafcass Cymru data can be accessed through the SAIL Databank. The FJDP will continue to enhance research opportunities for all to better understand the family justice system, and outcomes for those involved, such as health and wellbeing for children and family members.
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Affiliation(s)
- RD Johnson
- Population Data Science, Swansea University Medical School, Swansea, SA2 8PP, UK
| | - DV Ford
- Population Data Science, Swansea University Medical School, Swansea, SA2 8PP, UK
| | - K Broadhurst
- Centre for Child & Family Justice Research, Lancaster University, Lancaster, LA1 4YW, UK
| | - L Cusworth
- Centre for Child & Family Justice Research, Lancaster University, Lancaster, LA1 4YW, UK
| | - KH Jones
- Population Data Science, Swansea University Medical School, Swansea, SA2 8PP, UK
| | - A Akbari
- Population Data Science, Swansea University Medical School, Swansea, SA2 8PP, UK
| | - S Bedston
- Centre for Child & Family Justice Research, Lancaster University, Lancaster, LA1 4YW, UK
| | - B Alrouh
- Centre for Child & Family Justice Research, Lancaster University, Lancaster, LA1 4YW, UK
| | - S Doebler
- Centre for Child & Family Justice Research, Lancaster University, Lancaster, LA1 4YW, UK
| | - A Lee
- Population Data Science, Swansea University Medical School, Swansea, SA2 8PP, UK
| | - J Smart
- Population Data Science, Swansea University Medical School, Swansea, SA2 8PP, UK
| | - S Thompson
- Population Data Science, Swansea University Medical School, Swansea, SA2 8PP, UK
| | - L Trinder
- Law School, University of Exeter, Exeter, EX4 4RJ, UK
| | - LJ Griffiths
- Population Data Science, Swansea University Medical School, Swansea, SA2 8PP, UK
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Vibhakar AM, Khalyavin DD, Manuel P, Liu J, Belik AA, Johnson RD. Spontaneous Rotation of Ferrimagnetism Driven by Antiferromagnetic Spin Canting. Phys Rev Lett 2020; 124:127201. [PMID: 32281828 DOI: 10.1103/physrevlett.124.127201] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2019] [Accepted: 02/28/2020] [Indexed: 06/11/2023]
Abstract
Spin-reorientation phase transitions that involve the rotation of a crystal's magnetization have been well characterized in distorted-perovskite oxides such as orthoferrites. In these systems spin reorientation occurs due to competing rare-earth and transition metal anisotropies coupled via f-d exchange. Here, we demonstrate an alternative paradigm for spin reorientation in distorted perovskites. We show that the R_{2}CuMnMn_{4}O_{12} (R=Y or Dy) triple A-site columnar-ordered quadruple perovskites have three ordered magnetic phases and up to two spin-reorientation phase transitions. Unlike the spin-reorientation phenomena in other distorted perovskites, these transitions are independent of rare-earth magnetism, but are instead driven by an instability towards antiferromagnetic spin canting likely originating in frustrated Heisenberg exchange interactions, and the competition between Dzyaloshinskii-Moriya and single-ion anisotropies.
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Affiliation(s)
- A M Vibhakar
- Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, United Kingdom
| | - D D Khalyavin
- ISIS facility, Rutherford Appleton Laboratory-STFC, Chilton, Didcot OX11 0QX, United Kingdom
| | - P Manuel
- ISIS facility, Rutherford Appleton Laboratory-STFC, Chilton, Didcot OX11 0QX, United Kingdom
| | - J Liu
- Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, United Kingdom
| | - A A Belik
- Research Center for Functional Materials, National Institute for Materials Science (NIMS), Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
| | - R D Johnson
- Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, United Kingdom
- Department of Physics and Astronomy, University College London, Gower Street, London WC1E 6BT, United Kingdom
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Affiliation(s)
- David E. Hume
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | - Alan V. Stewart
- PGG Wrightson Seeds Limited, Kimihia Research Centre, Lincoln, New Zealand
| | - Wayne R. Simpson
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
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Forte FP, Schmid J, Dijkwel PP, Nagy I, Hume DE, Johnson RD, Simpson WR, Monk SM, Zhang N, Sehrish T, Asp T. Fungal Endophyte Colonization Patterns Alter Over Time in the Novel Association Between Lolium perenne and Epichloë Endophyte AR37. Front Plant Sci 2020; 11:570026. [PMID: 33193501 PMCID: PMC7658011 DOI: 10.3389/fpls.2020.570026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Accepted: 09/22/2020] [Indexed: 05/16/2023]
Abstract
Infection of the pasture grass Lolium perenne with the seed-transmitted fungal endophyte Epichloë festucae enhances its resilience to biotic and abiotic stress. Agricultural benefits of endophyte infection can be increased by generating novel symbiotic associations through inoculating L. perenne with selected Epichloë strains. Natural symbioses have coevolved over long periods. Thus, artificial symbioses will probably not have static properties, but symbionts will coadapt over time improving the fitness of the association. Here we report for the first time on temporal changes in a novel association of Epichloë strain AR37 and the L. perenne cultivar Grasslands Samson. Over nine generations, a seed maintenance program had increased the endophyte seed transmission rates to > 95% (from an initial 76%). We observed an approximately fivefold decline in endophyte biomass concentration in vegetative tissues over time (between generations 2 and 9). This indicates strong selection pressure toward reducing endophyte-related fitness costs by reducing endophyte biomass, without compromising the frequency of endophyte transmission to seed. We observed no obvious changes in tillering and only minor transcriptomic changes in infected plants over time. Functional analysis of 40 plant genes, showing continuously decreasing expression over time, suggests that adaptation of host metabolism and defense mechanisms are important for increasing the fitness of this association, and possibly fitness of such symbioses in general. Our results indicate that fitness of novel associations is likely to improve over time and that monitoring changes in novel associations can assist in identifying key features of endophyte-mediated enhancement of host fitness.
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Affiliation(s)
- Flavia Pilar Forte
- Center for Quantitative Genetics and Genomics, Aarhus University, Slagelse, Denmark
- School of Fundamental Sciences, Massey University, Palmerston North, New Zealand
- *Correspondence: Flavia Pilar Forte,
| | - Jan Schmid
- School of Fundamental Sciences, Massey University, Palmerston North, New Zealand
- Ferguson Street Laboratories, Palmerston North, New Zealand
| | - Paul P. Dijkwel
- School of Fundamental Sciences, Massey University, Palmerston North, New Zealand
| | - Istvan Nagy
- Center for Quantitative Genetics and Genomics, Aarhus University, Slagelse, Denmark
| | - David E. Hume
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | | | - Wayne R. Simpson
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | | | - Ningxin Zhang
- School of Fundamental Sciences, Massey University, Palmerston North, New Zealand
| | - Tina Sehrish
- School of Fundamental Sciences, Massey University, Palmerston North, New Zealand
| | - Torben Asp
- Center for Quantitative Genetics and Genomics, Aarhus University, Slagelse, Denmark
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Rahnama M, Maclean P, Fleetwood DJ, Johnson RD. VelA and LaeA are Key Regulators of Epichloë festucae Transcriptomic Response during Symbiosis with Perennial Ryegrass. Microorganisms 2019; 8:microorganisms8010033. [PMID: 31878026 PMCID: PMC7023048 DOI: 10.3390/microorganisms8010033] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2019] [Revised: 12/20/2019] [Accepted: 12/20/2019] [Indexed: 12/29/2022] Open
Abstract
VelA (or VeA) is a key global regulator in fungal secondary metabolism and development which we previously showed is required during the symbiotic interaction of Epichloë festucae with perennial ryegrass. In this study, comparative transcriptomic analyses of ∆velA mutant compared to wild-type E. festucae, under three different conditions (in culture, infected seedlings, and infected mature plants), were performed to investigate the impact of VelA on E. festucae transcriptome. These comparative transcriptomic studies showed that VelA regulates the expression of genes encoding proteins involved in membrane transport, fungal cell wall biosynthesis, host cell wall degradation, and secondary metabolism, along with a number of small secreted proteins and a large number of proteins with no predictable functions. In addition, these results were compared with previous transcriptomic experiments that studied the impact of LaeA, another key global regulator of secondary metabolism and development that we have shown is important for E. festucae–perennial ryegrass interaction. The results showed that although VelA and LaeA regulate a subset of E. festucae genes in a similar manner, they also regulated many other genes independently of each other suggesting specialised roles.
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Affiliation(s)
- Mostafa Rahnama
- AgResearch, Grasslands Research Centre, Palmerston North 4442, New Zealand; (P.M.); (D.J.F.)
- School of Biological Sciences, University of Auckland, Auckland 1010, New Zealand
- Correspondence: (M.R.); (R.D.J.)
| | - Paul Maclean
- AgResearch, Grasslands Research Centre, Palmerston North 4442, New Zealand; (P.M.); (D.J.F.)
| | - Damien J. Fleetwood
- AgResearch, Grasslands Research Centre, Palmerston North 4442, New Zealand; (P.M.); (D.J.F.)
- Biotelliga Ltd, Auckland 1052, New Zealand
| | - Richard D. Johnson
- AgResearch, Grasslands Research Centre, Palmerston North 4442, New Zealand; (P.M.); (D.J.F.)
- Correspondence: (M.R.); (R.D.J.)
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Maselli D, Johnson RD, Szilveszter Matos R, Chiappini C, Camelliti P, Campagnolo P. P4488Organotypic culture of the epicardium: a new tool for cardiovascular research. Eur Heart J 2019. [DOI: 10.1093/eurheartj/ehz745.0881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Abstract
Background
The epicardium, the most external layer of the heart, is composed of a layer of epithelial cells and underlying connective tissue. Following myocardial infarction, epicardial cells are activated and provide a source of paracrine factors and progenitor cells. In the border zone of the ischaemic tissue, the activated epicardial cells support cardiac and vascular regeneration by releasing pro-angiogenic and pro-survival factors, and by differentiating towards multiple cell lineages. During this process, activated epicardial cells migrate to the site of injury where they contribute to both post-ischemic remodelling and fibrosis. There is limited knowledge of the cellular and molecular regulation of these processes in large animals and humans, in part due to the lack of robust and representative models.
Purpose
In this project, we developed an ex vivo 3D organotypic model derived from porcine hearts, amenable to culture, which enables structural, molecular and cellular studies of the epicardium.
Methods
Thin epicardial/cardiac tissue slices (EpCardio-TS) were obtained by using a vibratome to cut the first layer of tissue from the epicardial side of porcine heart cubes. Slices were cultured for up to 72h in a bioreactor that uses a 3D printed chamber connected to a control system that allows maintenance and adjustment of culture conditions, and ensures continuous media flow. Local intracellular delivery of fluorescent quantum-dots (Qdots) was performed using nanoneedle chips to track epicardial cells, whilst cell fate is visualised in 3D by performing immunofluorescence on decolourised slices.
Results
Intact EpCardio-TS obtained from porcine heart included a viable epicardium, expressing typical epicardial markers (wt-1, mesothelin, uroplakin), and an electrically active myocardium. Live/dead staining showed epicardial (67.8±16.2%, N=5) and myocardial (40.8±28.6%, N=3) viability, and TUNEL assay confirmed low levels of apoptosis (6.3±5.1% of wt-1+ epicardial cells N=1). Moreover, the presence of proliferating epicardial cells (PCNA+), the increase in wt-1+ cells, and the increase in epicardial gene expression (Tbx18 and TCF21) suggested that cells maintain their progenitor phenotype and undergo activation in culture. Nanoinjection of fluorescent Qdots to EpCardio-TS localized them to the wt-1+ cells on the slice surface, presenting a strategy to mark the epicardial layer. This, combined with the successful decolourisation of the slices, provides an in vitro platform to track the role of epicardial cells in cardiac remodelling and fibrosis.
Conclusions
EpCardio-TS represents a robust ex vivo model merging the complexity of a 3D organotypic culture with the simplicity of the in vitro culture. EpCardio-TS are amenable to culture and cell tracking, and can therefore find application in toxicology and gene therapy screening for the modulation of epicardial interactions with myocardial and non-myocardial cells of the heart.
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Affiliation(s)
- D Maselli
- University of Surrey, Guildford, United Kingdom
| | - R D Johnson
- University of Surrey, Guildford, United Kingdom
| | | | - C Chiappini
- King's College London, London, United Kingdom
| | - P Camelliti
- University of Surrey, Guildford, United Kingdom
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Rahnama M, Maclean P, Fleetwood DJ, Johnson RD. The LaeA orthologue in Epichloë festucae is required for symbiotic interaction with Lolium perenne. Fungal Genet Biol 2019; 129:74-85. [PMID: 31071427 DOI: 10.1016/j.fgb.2019.05.001] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2018] [Revised: 05/02/2019] [Accepted: 05/02/2019] [Indexed: 10/26/2022]
Abstract
LaeA is a conserved global regulator of secondary metabolism and development in fungi. It is often required for successful pathogenic interactions. In this study, the laeA homologue in the fungal grass endophyte E. festucae was deleted and functionally characterised in vitro and its role in the mutualistic E. festucae interaction with Lolium perenne (perennial ryegrass) was determined. We showed that laeA in E. festucae is required for normal hyphal morphology, resistance to oxidative stress, and conidiation under nutrient-limited in vitro conditions. In planta studies revealed that laeA is expressed in a tissue-specific manner and is required to form a compatible plant interaction, with the majority of seedlings inoculated with a laeA deletion mutant either dying or being uninfected. In mature infected plants no difference was observed in the number or morphology of endophytic hyphae. However, the number of epiphyllous hyphae were greatly increased. Comparative transcriptomics analyses suggested roles for plant cell wall degradation, fungal cell wall composition, secondary metabolism and small-secreted proteins in Epichloë foliar symbiosis.
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Affiliation(s)
- M Rahnama
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand; School of Biological Sciences, University of Auckland, New Zealand
| | - P Maclean
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | - D J Fleetwood
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand; Biotelliga Ltd, Auckland, New Zealand.
| | - R D Johnson
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand.
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Liu J, Kittaka S, Johnson RD, Lancaster T, Singleton J, Sakakibara T, Kohama Y, van Tol J, Ardavan A, Williams BH, Blundell SJ, Manson ZE, Manson JL, Goddard PA. Unconventional Field-Induced Spin Gap in an S=1/2 Chiral Staggered Chain. Phys Rev Lett 2019; 122:057207. [PMID: 30822013 DOI: 10.1103/physrevlett.122.057207] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2018] [Indexed: 06/09/2023]
Abstract
We investigate the low-temperature magnetic properties of the molecule-based chiral spin chain [Cu(pym)(H_{2}O)_{4}]SiF_{6}·H_{2}O (pym=pyrimidine). Electron-spin resonance, magnetometry and heat capacity measurements reveal the presence of staggered g tensors, a rich low-temperature excitation spectrum, a staggered susceptibility, and a spin gap that opens on the application of a magnetic field. These phenomena are reminiscent of those previously observed in nonchiral staggered chains, which are explicable within the sine-Gordon quantum-field theory. In the present case, however, although the sine-Gordon model accounts well for the form of the temperature dependence of the heat capacity, the size of the gap and its measured linear field dependence do not fit with the sine-Gordon theory as it stands. We propose that the differences arise due to additional terms in the Hamiltonian resulting from the chiral structure of [Cu(pym)(H_{2}O)_{4}]SiF_{6}·H_{2}O, particularly a uniform Dzyaloshinskii-Moriya coupling and a fourfold periodic staggered field.
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Affiliation(s)
- J Liu
- Department of Physics, Clarendon Laboratory, University of Oxford, Parks Road, Oxford OX1 3PU, United Kingdom
| | - S Kittaka
- Institute for Solid State Physics, University of Tokyo, Kashiwa, Chiba 277-8581, Japan
| | - R D Johnson
- Department of Physics, Clarendon Laboratory, University of Oxford, Parks Road, Oxford OX1 3PU, United Kingdom
| | - T Lancaster
- Centre for Materials Physics, Durham University, South Road, Durham DH1 3LE, United Kingdom
| | - J Singleton
- National High Magnetic Field Laboratory, Los Alamos National Laboratory, MS-E536, Los Alamos, New Mexico 87545, USA
| | - T Sakakibara
- Institute for Solid State Physics, University of Tokyo, Kashiwa, Chiba 277-8581, Japan
| | - Y Kohama
- Institute for Solid State Physics, University of Tokyo, Kashiwa, Chiba 277-8581, Japan
| | - J van Tol
- National High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310, USA
| | - A Ardavan
- Department of Physics, Clarendon Laboratory, University of Oxford, Parks Road, Oxford OX1 3PU, United Kingdom
| | - B H Williams
- Department of Physics, Clarendon Laboratory, University of Oxford, Parks Road, Oxford OX1 3PU, United Kingdom
| | - S J Blundell
- Department of Physics, Clarendon Laboratory, University of Oxford, Parks Road, Oxford OX1 3PU, United Kingdom
| | - Z E Manson
- Department of Chemistry and Biochemistry, Eastern Washington University, Cheney, Washington 99004, USA
| | - J L Manson
- Department of Chemistry and Biochemistry, Eastern Washington University, Cheney, Washington 99004, USA
| | - P A Goddard
- Department of Physics, University of Warwick, Gibbet Hill Road, Coventry, CV4 7AL, United Kingdom
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Mendoza P, Giglio RF, Olmo C, Abbott JR, Johnson RD, Berry CR. Anatomic characterization of pulmonary accessory fissures in canine cadavers. Anat Histol Embryol 2019; 48:157-163. [PMID: 30657203 DOI: 10.1111/ahe.12424] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2017] [Revised: 09/02/2018] [Accepted: 12/17/2018] [Indexed: 11/28/2022]
Abstract
Accessory fissures in the lungs are well described in humans, considered a normal finding, being identified in 60% of autopsied lungs, and more prevalent in the right lung (Gesase, ; Nene, Gajendra, & Sarma, 2011). In dogs, interlobar fissures are well recognized, but there is the lack of anatomic characterization for accessory fissures in the accessible literature. The purpose of this descriptive study was to identify the prevalence and to describe the anatomic localization of accessory fissures. The lungs from 87 dog cadavers used to teach veterinary gross anatomy were collected. Accessory fissures were characterized for each lung lobe, specific lung lobe location, orientation, length and the number of accessory fissures per lobe. Accessory fissures were recognized in 48/87 (55%) of canine lungs, all located in the periphery of the individual lobes. We found a significant association between the presence of accessory fissures and the costal surface of the lung (p < 0.0001), the right lung (p < 0.004), the right cranial lung lobe (p < 0.002) and the left cranial lung lobe (p < 0.04). Histologic results showed normal alveolar and respiratory bronchioles to the level of the accessory fissures. Our results show that accessory fissures are a common finding and should be considered a normal variant. They are more prevalent in the right lung, in the costal surface, and in the right and left cranial lung lobes. An anatomic nomenclature for accessory fissures based on the current Nomina Anatomica Veterinaria and the human literature is proposed. Further studies include a comparison among anatomical accessory fissures, and radiographic and computed tomographic images.
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Affiliation(s)
- Patricia Mendoza
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine, University of Florida, Gainesville, Florida
| | - Robson F Giglio
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine, University of Florida, Gainesville, Florida
| | - Christopher Olmo
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine, University of Florida, Gainesville, Florida
| | - Jeffrey R Abbott
- Department of Infectious Diseases and Pathology College of Veterinary Medicine, University of Florida, Gainesville, Florida
| | - Richard D Johnson
- Department of Physiological Sciences, College of Veterinary Medicine, University of Florida, Gainesville, Florida
| | - Clifford R Berry
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine, University of Florida, Gainesville, Florida
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Ackerley R, Wiklund Fernström K, Backlund Wasling H, Watkins RH, Johnson RD, Vallbo Å, Wessberg J. Differential effects of radiant and mechanically applied thermal stimuli on human C-tactile afferent firing patterns. J Neurophysiol 2018; 120:1885-1892. [PMID: 30044679 DOI: 10.1152/jn.00940.2017] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
C-tactile (CT) afferents respond to gentle tactile stimulation, but only a handful of studies in humans and animals have investigated whether their firing is modified by temperature. We describe the effects of radiant thermal stimuli, and of stationary and very slowly moving mechanothermal stimuli, on CT afferent responses. We find that CT afferents are primarily mechanoreceptors, as they fired little during radiant thermal stimuli, but they exhibited different patterns of firing during combined mechano-cool stimulation compared with warming. CTs fired optimally to gentle, very slowly moving, or stationary mechanothermal stimuli delivered at neutral temperature (~32°C, normal skin temperature), but they responded with fewer spikes (median 67% decrease) and at significantly lower rates (47% decrease) during warm (~42°C) tactile stimuli. During cool tactile stimuli (~18°C), their mean instantaneous firing frequency significantly decreased by 35%, but they often fired a barrage of afterdischarge spikes at a low frequency (~5 Hz) that outlasted the mechanical stimulus. These effects were observed under a variety of stimulus conditions, including during stationary and slowly moving touch (0.1 cm/s), and we complemented these tactile approaches using a combined electrical-thermal stimulation experiment where we found a suppression of spiking during warming. Overall, CT afferents are exquisitely sensitive to tactile events, and we show that their firing is modulated with touch temperatures above and below neutral skin temperature. Warm touch consistently decreased their propensity to fire, whereas cool touch produced lower firing rates but afterdischarge spiking. NEW & NOTEWORTHY C-tactile (CT) afferents are thought to underpin pleasant touch, and previous work has shown that they respond optimally to a slow caress delivered at typical (neutral) skin temperature. Here, we show that, although CTs are primarily mechanoreceptive afferents, they are modified by temperature: warm touch decreases their firing, whereas cool touch produces lower firing rates but long-lasting spiking, frequently seen as afterdischarges. This has implications for the encoding of affective sensory events in human skin.
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Affiliation(s)
- Rochelle Ackerley
- Aix Marseille Université, CNRS, LNSC (Laboratoire de Neurosciences Sensorielles et Cognitives - UMR 7260), Marseille , France.,Department of Physiology, University of Gothenburg , Gothenburg , Sweden
| | | | | | - Roger H Watkins
- Department of Physiology, University of Gothenburg , Gothenburg , Sweden
| | - Richard D Johnson
- Department of Physiology, University of Gothenburg , Gothenburg , Sweden.,Department of Physiological Sciences, University of Florida College of Veterinary Medicine , Gainesville, Florida
| | - Åke Vallbo
- Department of Physiology, University of Gothenburg , Gothenburg , Sweden
| | - Johan Wessberg
- Department of Physiology, University of Gothenburg , Gothenburg , Sweden
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Chmiel FP, Waterfield Price N, Johnson RD, Lamirand AD, Schad J, van der Laan G, Harris DT, Irwin J, Rzchowski MS, Eom CB, Radaelli PG. Observation of magnetic vortex pairs at room temperature in a planar α-Fe 2O 3/Co heterostructure. Nat Mater 2018; 17:581-585. [PMID: 29915425 DOI: 10.1038/s41563-018-0101-x] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2018] [Accepted: 05/08/2018] [Indexed: 06/08/2023]
Abstract
Vortices, occurring whenever a flow field 'whirls' around a one-dimensional core, are among the simplest topological structures, ubiquitous to many branches of physics. In the crystalline state, vortex formation is rare, since it is generally hampered by long-range interactions: in ferroic materials (ferromagnetic and ferroelectric), vortices are observed only when the effects of the dipole-dipole interaction are modified by confinement at the nanoscale1-3, or when the parameter associated with the vorticity does not couple directly with strain 4 . Here, we observe an unprecedented form of vortices in antiferromagnetic haematite (α-Fe2O3) epitaxial films, in which the primary whirling parameter is the staggered magnetization. Remarkably, ferromagnetic topological objects with the same vorticity and winding number as the α-Fe2O3 vortices are imprinted onto an ultra-thin Co ferromagnetic over-layer by interfacial exchange. Our data suggest that the ferromagnetic vortices may be merons (half-skyrmions, carrying an out-of plane core magnetization), and indicate that the vortex/meron pairs can be manipulated by the application of an in-plane magnetic field, giving rise to large-scale vortex-antivortex annihilation.
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Affiliation(s)
- F P Chmiel
- Clarendon Laboratory, Department of Physics, University of Oxford, Oxford, UK
| | - N Waterfield Price
- Clarendon Laboratory, Department of Physics, University of Oxford, Oxford, UK
| | - R D Johnson
- Clarendon Laboratory, Department of Physics, University of Oxford, Oxford, UK
| | - A D Lamirand
- Diamond Light Source, Harwell Science and Innovation Campus, Didcot, UK
| | - J Schad
- Department of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, USA
| | - G van der Laan
- Diamond Light Source, Harwell Science and Innovation Campus, Didcot, UK
| | - D T Harris
- Department of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, USA
| | - J Irwin
- Department of Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - M S Rzchowski
- Department of Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - C-B Eom
- Department of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, USA.
| | - P G Radaelli
- Clarendon Laboratory, Department of Physics, University of Oxford, Oxford, UK.
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LeBlanc MM, Johnson RD, Calderwood Mays MB, Valderrama C. Lymphatic Clearance of India Ink in Reproductively Normal Mares and Mares Susceptible to Endometritis1. Biol Reprod 2018. [DOI: 10.1093/biolreprod/52.monograph_series1.501] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
| | - Richard D. Johnson
- College of Veterinary Medicine, University of Florida, Gainesville, Florida
| | | | - Claudia Valderrama
- College of Veterinary Medicine, University of Florida, Gainesville, Florida
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Johnson RD, Mezzadri F, Manuel P, Khalyavin DD, Gilioli E, Radaelli PG. Evolution of Magneto-Orbital order Upon B-Site Electron Doping in Na_{1-x}Ca_{x}Mn_{7}O_{12} Quadruple Perovskite Manganites. Phys Rev Lett 2018; 120:257202. [PMID: 29979054 DOI: 10.1103/physrevlett.120.257202] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2018] [Revised: 03/28/2018] [Indexed: 06/08/2023]
Abstract
We present the discovery and refinement by neutron powder diffraction of a new magnetic phase in the Na_{1-x}Ca_{x}Mn_{7}O_{12} quadruple perovskite phase diagram, which is the incommensurate analogue of the well-known pseudo-CE phase of the simple perovskite manganites. We demonstrate that incommensurate magnetic order arises in quadruple perovskites due to the exchange interactions between A and B sites. Furthermore, by constructing a simple mean field Heisenberg exchange model that generically describes both simple and quadruple perovskite systems, we show that this new magnetic phase unifies a picture of the interplay between charge, magnetic, and orbital ordering across a wide range of compounds.
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Affiliation(s)
- R D Johnson
- Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, United Kingdom
| | - F Mezzadri
- Istituto dei Materiali per Elettronica e Magnetismo, CNR, Area delle Scienze, 43100 Parma, Italy
| | - P Manuel
- ISIS Facility, Rutherford Appleton Laboratory-STFC, Chilton, Didcot OX11 0QX, United Kingdom
| | - D D Khalyavin
- ISIS Facility, Rutherford Appleton Laboratory-STFC, Chilton, Didcot OX11 0QX, United Kingdom
| | - E Gilioli
- Istituto dei Materiali per Elettronica e Magnetismo, CNR, Area delle Scienze, 43100 Parma, Italy
| | - P G Radaelli
- Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, United Kingdom
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Rahnama M, Johnson RD, Voisey CR, Simpson WR, Fleetwood DJ. The Global Regulatory Protein VelA Is Required for Symbiosis Between the Endophytic Fungus Epichloë festucae and Lolium perenne. Mol Plant Microbe Interact 2018; 31:591-604. [PMID: 29315021 DOI: 10.1094/mpmi-11-17-0286-r] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Epichloë species fungi form bioprotective endophytic symbioses with many cool-season grasses, including agriculturally important forage grasses. Despite its importance, relatively little is known about the molecular details of the interaction and the regulatory genes involved. The conserved velvet-domain protein VelA (or VeA) is a global regulator of a number of cellular and developmental functions in fungi. In this study, the E. festucae velA gene was functionally characterized in vitro and during interaction with perennial ryegrass. The velA gene is required in E. festucae for resistance to osmotic and cell wall-damaging stresses, repression of conidiation, and normal hyphal morphology during nutrient-limited in-vitro conditions. Expression of velA in E. festucae is light- and nitrogen-dependent and is tissue-specific in mature infected plants. In-planta studies showed that velA is required in E. festucae for a compatible interaction. Inoculating seedlings with mutant ΔvelA induced callose deposition and H2O2 production, and a high level of seedling death was observed. In surviving plants infected with ΔvelA mutant fungi, plants were stunted and we observed increased biomass and invasion of vascular bundles. Overall, this work characterizes a key fungal regulatory factor in this increasingly important model symbiotic association.
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Affiliation(s)
- M Rahnama
- 1 AgResearch, Grasslands Research Centre, Palmerston North, New Zealand; and
- 2 School of Biological Sciences, University of Auckland, New Zealand
| | - R D Johnson
- 1 AgResearch, Grasslands Research Centre, Palmerston North, New Zealand; and
| | - C R Voisey
- 1 AgResearch, Grasslands Research Centre, Palmerston North, New Zealand; and
| | - W R Simpson
- 1 AgResearch, Grasslands Research Centre, Palmerston North, New Zealand; and
| | - D J Fleetwood
- 1 AgResearch, Grasslands Research Centre, Palmerston North, New Zealand; and
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Campbell MA, Tapper BA, Simpson WR, Johnson RD, Mace W, Ram A, Lukito Y, Dupont PY, Johnson LJ, Scott DB, Ganley ARD, Cox MP. Epichloë hybrida, sp. nov., an emerging model system for investigating fungal allopolyploidy. Mycologia 2018; 109:715-729. [PMID: 29370579 DOI: 10.1080/00275514.2017.1406174] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Endophytes of the genus Epichloë (Clavicipitaceae, Ascomycota) frequently occur within cool-season grasses and form interactions with their hosts that range from mutualistic to antagonistic. Many Epichloë species have arisen via interspecific hybridization, resulting in species with two or three subgenomes that retain all or nearly all of their original parental genomes, a process termed allopolyploidization. Here, we characterize Epichloë hybrida, sp. nov., a mutualistic species that has increasingly become a model system for investigating allopolyploidy in fungi. The Epichloë species so far identified as the closest known relatives of the two progenitors of E. hybrida are E. festucae var. lolii and E. typhina. We confirm that the nuclear genome of E. hybrida contains two homeologs of most protein-coding genes from E. festucae and E. typhina, with genome-wide gene expression analysis indicating a slight bias in overall gene expression from the E. typhina subgenome. Mitochondrial DNA is detectable only from E. festucae, whereas ribosomal DNA is detectable only from E. typhina. Inheriting ribosomal DNA from just one parent might be expected to preferentially favor interactions with ribosomal proteins from the same parent, but we find that ribosomal protein genes from both parental subgenomes are nearly all expressed equally in E. hybrida. Finally, we provide a comprehensive set of resources for this model system that are intended to facilitate further study of fungal hybridization by other researchers.
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Affiliation(s)
- Matthew A Campbell
- a Institute of Fundamental Sciences, Massey University , Private Bag 11 222, Palmerston North 4410 , New Zealand
| | - Brian A Tapper
- b AgResearch Ltd., Grasslands Research Centre , Tennent Drive, Palmerston North 4442 , New Zealand
| | - Wayne R Simpson
- b AgResearch Ltd., Grasslands Research Centre , Tennent Drive, Palmerston North 4442 , New Zealand
| | - Richard D Johnson
- b AgResearch Ltd., Grasslands Research Centre , Tennent Drive, Palmerston North 4442 , New Zealand
| | - Wade Mace
- b AgResearch Ltd., Grasslands Research Centre , Tennent Drive, Palmerston North 4442 , New Zealand
| | - Arvina Ram
- a Institute of Fundamental Sciences, Massey University , Private Bag 11 222, Palmerston North 4410 , New Zealand
| | - Yonathan Lukito
- a Institute of Fundamental Sciences, Massey University , Private Bag 11 222, Palmerston North 4410 , New Zealand
| | - Pierre-Yves Dupont
- a Institute of Fundamental Sciences, Massey University , Private Bag 11 222, Palmerston North 4410 , New Zealand
| | - Linda J Johnson
- b AgResearch Ltd., Grasslands Research Centre , Tennent Drive, Palmerston North 4442 , New Zealand
| | - D Barry Scott
- a Institute of Fundamental Sciences, Massey University , Private Bag 11 222, Palmerston North 4410 , New Zealand
| | - Austen R D Ganley
- c School of Biological Sciences, University of Auckland , Private Bag 92019, Auckland 1142 , New Zealand
| | - Murray P Cox
- a Institute of Fundamental Sciences, Massey University , Private Bag 11 222, Palmerston North 4410 , New Zealand
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Gagic M, Faville MJ, Zhang W, Forester NT, Rolston MP, Johnson RD, Ganesh S, Koolaard JP, Easton HS, Hudson D, Johnson LJ, Moon CD, Voisey CR. Seed Transmission of Epichloë Endophytes in Lolium perenne Is Heavily Influenced by Host Genetics. Front Plant Sci 2018; 9:1580. [PMID: 30483280 PMCID: PMC6242978 DOI: 10.3389/fpls.2018.01580] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2018] [Accepted: 10/10/2018] [Indexed: 05/14/2023]
Abstract
Vertical transmission of symbiotic Epichloë endophytes from host grasses into progeny seed is the primary mechanism by which the next generation of plants is colonized. This process is often imperfect, resulting in endophyte-free seedlings which may have poor ecological fitness if the endophyte confers protective benefits to its host. In this study, we investigated the influence of host genetics and environment on the vertical transmission of Epichloë festucae var. lolii strain AR37 in the temperate forage grass Lolium perenne. The efficiency of AR37 transmission into the seed of over 500 plant genotypes from five genetically diverse breeding populations was determined. In Populations I-III, which had undergone previous selection for high seed infection by AR37, mean transmission was 88, 93, and 92%, respectively. However, in Populations IV and V, which had not undergone previous selection, mean transmission was 69 and 70%, respectively. The transmission values, together with single-nucleotide polymorphism data obtained using genotyping-by-sequencing for each host, was used to develop a genomic prediction model for AR37 seed transmission. The predictive ability of the model was estimated at r = 0.54. While host genotype contributed greatly to differences in AR37 seed transmission, undefined environmental variables also contributed significantly to seed transmission across different years and geographic locations. There was evidence for a small host genotype-by-environment effect; however this was less pronounced than genotype or environment alone. Analysis of endophyte infection levels in parent plants within Populations I and IV revealed a loss of endophyte infection over time in Population IV only. This population also had lower average tiller infection frequencies than Population I, suggesting that AR37 failed to colonize all the daughter tillers and therefore seeds. However, we also observed that infection of seed by AR37 may fail during or after initiation of floral development from plants where all tillers remained endophyte-infected over time. While the effects of environment and host genotype on fungal endophyte transmission have been evaluated previously, this is the first study that quantifies the relative impacts of host genetics and environment on endophyte vertical transmission.
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Affiliation(s)
- Milan Gagic
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | - Marty J. Faville
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | - Wei Zhang
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | | | | | | | - Siva Ganesh
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | - John P. Koolaard
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | - H. Sydney Easton
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | - Debbie Hudson
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | - Linda J. Johnson
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | - Christina D. Moon
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
| | - Christine R. Voisey
- AgResearch, Grasslands Research Centre, Palmerston North, New Zealand
- *Correspondence: Christine R. Voisey,
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Agbelele A, Sando D, Toulouse C, Paillard C, Johnson RD, Rüffer R, Popkov AF, Carrétéro C, Rovillain P, Le Breton JM, Dkhil B, Cazayous M, Gallais Y, Méasson MA, Sacuto A, Manuel P, Zvezdin AK, Barthélémy A, Juraszek J, Bibes M. Strain and Magnetic Field Induced Spin-Structure Transitions in Multiferroic BiFeO 3. Adv Mater 2017; 29:1602327. [PMID: 28036128 DOI: 10.1002/adma.201602327] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2016] [Revised: 09/23/2016] [Indexed: 06/06/2023]
Abstract
The magnetic-field-dependent spin ordering of strained BiFeO3 films is determined using nuclear resonant scattering and Raman spectroscopy. The critical field required to destroy the cycloidal modulation of the Fe spins is found to be significantly lower than in the bulk, with appealing implications for field-controlled spintronic and magnonic devices.
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Affiliation(s)
- A Agbelele
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, GPM, 76800, Rouen, France
| | - D Sando
- Unité Mixte de Physique, CNRS, Thales, Univ. Paris-Sud, Université Paris-Saclay, 91767, Palaiseau, France
- School of Materials Science and Engineering, UNSW Australia, Sydney, NSW, 2052, Australia
| | - C Toulouse
- Laboratoire Matériaux et Phénomènes Quantiques (UMR 7162 CNRS), Université Paris Diderot-Paris 7, 75205, Paris Cedex 13, France
| | - C Paillard
- Laboratoire Structure, Propriétés et Modélisation des Solides, CentraleSupelec, CNRS-UMR8580, Université Paris-Saclay, 92290, Châtenay-Malabry, France
| | - R D Johnson
- Clarendon Laboratory, University of Oxford, Parks Road, Oxford, OX1 3PU, UK
| | - R Rüffer
- European Synchrotron Radiation Facility, CS 40220, F-38043, Grenoble Cedex 9, France
| | - A F Popkov
- Moscow Institute of Physics and Technology (State University), 141700, Dolgoprudny, Russia
- National Research University of Electronic Technology (MIET), Pas. 4806, Bld. 5, Zelenograd, 124498, Moscow, Russia
| | - C Carrétéro
- Unité Mixte de Physique, CNRS, Thales, Univ. Paris-Sud, Université Paris-Saclay, 91767, Palaiseau, France
| | - P Rovillain
- Laboratoire Matériaux et Phénomènes Quantiques (UMR 7162 CNRS), Université Paris Diderot-Paris 7, 75205, Paris Cedex 13, France
| | - J-M Le Breton
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, GPM, 76800, Rouen, France
| | - B Dkhil
- Laboratoire Structure, Propriétés et Modélisation des Solides, CentraleSupelec, CNRS-UMR8580, Université Paris-Saclay, 92290, Châtenay-Malabry, France
| | - M Cazayous
- Laboratoire Matériaux et Phénomènes Quantiques (UMR 7162 CNRS), Université Paris Diderot-Paris 7, 75205, Paris Cedex 13, France
| | - Y Gallais
- Laboratoire Matériaux et Phénomènes Quantiques (UMR 7162 CNRS), Université Paris Diderot-Paris 7, 75205, Paris Cedex 13, France
| | - M-A Méasson
- Laboratoire Matériaux et Phénomènes Quantiques (UMR 7162 CNRS), Université Paris Diderot-Paris 7, 75205, Paris Cedex 13, France
| | - A Sacuto
- Laboratoire Matériaux et Phénomènes Quantiques (UMR 7162 CNRS), Université Paris Diderot-Paris 7, 75205, Paris Cedex 13, France
| | - P Manuel
- ISIS Facility, STFC, Rutherford Appleton Laboratory, Didcot, OX11 0QX, UK
| | - A K Zvezdin
- Moscow Institute of Physics and Technology (State University), 141700, Dolgoprudny, Russia
- Prokhorov General Physics Institute, Russian Academy of Sciences, 119991, Moscow, Russia
- Russian Quantum Center, Skolkovo, Moscow, 143025, Russia
| | - A Barthélémy
- Unité Mixte de Physique, CNRS, Thales, Univ. Paris-Sud, Université Paris-Saclay, 91767, Palaiseau, France
| | - J Juraszek
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, GPM, 76800, Rouen, France
| | - M Bibes
- Unité Mixte de Physique, CNRS, Thales, Univ. Paris-Sud, Université Paris-Saclay, 91767, Palaiseau, France
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45
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Watkins RH, Wessberg J, Backlund Wasling H, Dunham JP, Olausson H, Johnson RD, Ackerley R. Optimal delineation of single C-tactile and C-nociceptive afferents in humans by latency slowing. J Neurophysiol 2017; 117:1608-1614. [PMID: 28123010 PMCID: PMC5376601 DOI: 10.1152/jn.00939.2016] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2016] [Revised: 01/23/2017] [Accepted: 01/23/2017] [Indexed: 11/24/2022] Open
Abstract
Human skin encodes a plethora of touch interactions, and affective tactile information is primarily signaled by slowly conducting C-mechanoreceptive afferents. We show that electrical stimulation of low-threshold C-tactile afferents produces markedly different patterns of activity compared with high-threshold C-mechanoreceptive nociceptors, although the populations overlap in their responses to mechanical stimulation. This fundamental distinction demonstrates a divergence in affective touch signaling from the first stage of sensory processing, having implications for the processing of interpersonal touch. C-mechanoreceptors in humans comprise a population of unmyelinated afferents exhibiting a wide range of mechanical sensitivities. C-mechanoreceptors are putatively divided into those signaling gentle touch (C-tactile afferents, CTs) and nociception (C-mechanosensitive nociceptors, CMs), giving rise to positive and negative affect, respectively. We sought to distinguish, compare, and contrast the properties of a population of human C-mechanoreceptors to see how fundamental the divisions between these putative subpopulations are. We used microneurography to record from individual afferents in humans and applied electrical and mechanical stimulation to their receptive fields. We show that C-mechanoreceptors can be distinguished unequivocally into two putative populations, comprising CTs and CMs, by electrically evoked spike latency changes (slowing). After both natural mechanical stimulation and repetitive electrical stimulation there was markedly less latency slowing in CTs compared with CMs. Electrical receptive field stimulation, which bypasses the receptor end organ, was most effective in classifying C-mechanoreceptors, as responses to mechanical receptive field stimulation overlapped somewhat, which may lead to misclassification. Furthermore, we report a subclass of low-threshold CM responding to gentle mechanical stimulation and a potential subclass of CT afferent displaying burst firing. We show that substantial differences exist in the mechanisms governing axonal conduction between CTs and CMs. We provide clear electrophysiological “signatures” (extent of latency slowing) that can be used in unequivocally identifying populations of C-mechanoreceptors in single-unit and multiunit microneurography studies and in translational animal research into affective touch. Additionally, these differential mechanisms may be pharmacologically targetable for separate modulation of positive and negative affective touch information. NEW & NOTEWORTHY Human skin encodes a plethora of touch interactions, and affective tactile information is primarily signaled by slowly conducting C-mechanoreceptive afferents. We show that electrical stimulation of low-threshold C-tactile afferents produces markedly different patterns of activity compared with high-threshold C-mechanoreceptive nociceptors, although the populations overlap in their responses to mechanical stimulation. This fundamental distinction demonstrates a divergence in affective touch signaling from the first stage of sensory processing, having implications for the processing of interpersonal touch.
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Affiliation(s)
- Roger H Watkins
- Department of Physiology, University of Gothenburg, Gothenburg, Sweden; .,School of Physiology and Pharmacology, University of Bristol, Bristol, United Kingdom
| | - Johan Wessberg
- Department of Physiology, University of Gothenburg, Gothenburg, Sweden
| | | | - James P Dunham
- University Division of Anaesthesia, Cambridge University Hospitals, NHS Foundation Trust, Cambridge, United Kingdom
| | - Håkan Olausson
- Department of Physiology, University of Gothenburg, Gothenburg, Sweden.,Center for Social and Affective Neuroscience, Department of Clinical and Experimental Medicine, Linkoping University, Linkoping, Sweden; and
| | - Richard D Johnson
- Department of Physiology, University of Gothenburg, Gothenburg, Sweden.,Department of Physiological Sciences, University of Florida, Gainesville, Florida
| | - Rochelle Ackerley
- Department of Physiology, University of Gothenburg, Gothenburg, Sweden.,Laboratoire de Neurosciences Intégratives et Adaptatives (UMR 7260), Aix-Marseille Université-CNRS, Marseille, France
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Bell NL, Adam KH, Jones RJ, Johnson RD, Mtandavari YF, Burch G, Cave V, Cameron C, Maclean P, Popay AJ, Fleetwood D. Detection of Invertebrate Suppressive Soils, and Identification of a Possible Biological Control Agent for Meloidogyne Nematodes Using High Resolution Rhizosphere Microbial Community Analysis. Front Plant Sci 2016; 7:1946. [PMID: 28082997 PMCID: PMC5183635 DOI: 10.3389/fpls.2016.01946] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2016] [Accepted: 12/07/2016] [Indexed: 05/29/2023]
Abstract
White clover (Trifolium repens) is the key legume component of New Zealand pastoral agriculture due to the high quality feed and nitrogen inputs it provides. Invertebrate pests constrain white clover growth and this study investigated rhizosphere-associated fungal controls for two of these pests and attempts to disentangle the underpinning mechanisms. The degree of suppressiveness of 10 soils, in a latitudinal gradient down New Zealand, to added Meloidogyne hapla and Costelytra zealandica scarab larvae was measured in untreated soil. Most of the soils showed no suppressive activity against these pests but two showed activity against M. hapla and two against C. zealandica. Rhizosphere fungi responsible for pest suppressive responses were elucidated via next-generation sequencing. In the M. hapla-suppressive soils nematode-trapping Orbiliomycetes fungi were present in significantly greater abundance than non-suppressive soils and their abundance increased further with addition of M. hapla. A comparison of plant growth and the rhizosphere fungal community between untreated and irradiated soil was carried out on 5 of the 10 soils using Pyronota as the scarab larvae. Soil irradiation either: reduced (by 60-70%); increased (16×) or made no difference to white clover growth across the five soils tested, illustrating the range of microbial impacts on plant production. In one of the M. hapla suppressive soils irradiation resulted in a significant increase in nematode galling suggesting that Orbiliomycetes fungi were indeed responsible for the suppressive effect. Lack of consistent changes in soil macronutrients and pH post-irradiation suggest these were not responsible for plant or invertebrate responses. The use of next generation sequencing in controlled pot trials has allowed identification of a potential biological control organism and bioindicator for M. hapla suppression.
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Affiliation(s)
- Nigel L. Bell
- Soil Biology Team, AgResearch Ltd, Ruakura Research CentreHamilton, New Zealand
| | - Katharine H. Adam
- Soil Biology Team, AgResearch Ltd, Ruakura Research CentreHamilton, New Zealand
| | - Rhys J. Jones
- Soil Biology Team, AgResearch Ltd, Ruakura Research CentreHamilton, New Zealand
| | - Richard D. Johnson
- Plant/Fungal Interactions Team, AgResearch Ltd, Grasslands Research CentrePalmerston North, New Zealand
| | | | - Gabriela Burch
- Soil Biology Team, AgResearch Ltd, Ruakura Research CentreHamilton, New Zealand
| | - Vanessa Cave
- Bioinformatics and Statistics Team, AgResearch Ltd, Ruakura Research CentreHamilton, New Zealand
| | - Catherine Cameron
- Bioinformatics and Statistics Team, AgResearch Ltd, Ruakura Research CentreHamilton, New Zealand
| | - Paul Maclean
- Bioinformatics and Statistics Team, AgResearch Ltd, Lincoln Research CentreChristchurch, New Zealand
| | - Alison J. Popay
- Soil Biology Team, AgResearch Ltd, Ruakura Research CentreHamilton, New Zealand
| | - Damien Fleetwood
- Biotelliga Ltd, Institute for Innovation in BiotechnologyAuckland, New Zealand
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47
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Flunker LK, Nutter TJ, Johnson RD, Cooper BY. DEET potentiates the development and persistence of anticholinesterase dependent chronic pain signs in a rat model of Gulf War Illness pain. Toxicol Appl Pharmacol 2016; 316:48-62. [PMID: 28025109 DOI: 10.1016/j.taap.2016.12.014] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2016] [Revised: 12/16/2016] [Accepted: 12/20/2016] [Indexed: 12/18/2022]
Abstract
Exposure to DEET (N,N-diethyl-meta-toluamide) may have influenced the pattern of symptoms observed in soldiers with GWI (Gulf War Illness; Haley and Kurt, 1997). We examined how the addition of DEET (400mg/kg; 50% topical) to an exposure protocol of permethrin (2.6mg/kg; topical), chlorpyrifos (CP; 120mg/kg), and pyridostigmine bromide (PB;13mg/kg) altered the emergence and pattern of pain signs in an animal model of GWI pain (Nutter et al., 2015). Rats underwent behavioral testing before, during and after a 4week exposure: 1) hindlimb pressure withdrawal threshold; 2) ambulation (movement distance and rate); and 3) resting duration. Additional studies were conducted to assess the influence of acute DEET (10-100μM) on muscle and vascular nociceptor Kv7, KDR, Nav1.8 and Nav1.9. We report that a 50% concentration of DEET enhanced the development and persistence of pain-signs. Rats exposed to all 4 compounds exhibited ambulation deficits that appeared 5-12weeks post-exposure and persisted through weeks 21-24. Rats exposed to only three agents (CP or PB excluded), did not fully develop ambulation deficits. When PB was excluded, rats also developed rest duration pain signs, in addition to ambulation deficits. There was no evidence that physiological doses of DEET acutely modified nociceptor Kv7, KDR, Nav1.8 or Nav1.9 activities. Nevertheless, DEET augmented protocols decreased the conductance of Kv7 expressed in vascular nociceptors harvested from chronically exposed rats. We concluded that DEET enhanced the development and persistence of pain behaviors, but the anticholinesterases CP and PB played a determinant role.
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Affiliation(s)
- L K Flunker
- Division of Neuroscience, Dept. of Oral and Maxillofacial Surgery, Box 100416, JHMHC, University of Florida College of Dentistry, Gainesville, FL 32610, USA.
| | - T J Nutter
- Division of Neuroscience, Dept. of Oral and Maxillofacial Surgery, Box 100416, JHMHC, University of Florida College of Dentistry, Gainesville, FL 32610, USA.
| | - R D Johnson
- Dept. of Physiological Sciences, University of Florida College of Veterinary Science, Gainesville, FL 32610, USA.
| | - B Y Cooper
- Division of Neuroscience, Dept. of Oral and Maxillofacial Surgery, Box 100416, JHMHC, University of Florida College of Dentistry, Gainesville, FL 32610, USA.
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48
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Santisteban MM, Qi Y, Zubcevic J, Kim S, Yang T, Shenoy V, Cole-Jeffrey CT, Lobaton GO, Stewart DC, Rubiano A, Simmons CS, Garcia-Pereira F, Johnson RD, Pepine CJ, Raizada MK. Hypertension-Linked Pathophysiological Alterations in the Gut. Circ Res 2016; 120:312-323. [PMID: 27799253 DOI: 10.1161/circresaha.116.309006] [Citation(s) in RCA: 319] [Impact Index Per Article: 39.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/29/2016] [Revised: 10/24/2016] [Accepted: 10/31/2016] [Indexed: 12/24/2022]
Abstract
RATIONALE Sympathetic nervous system control of inflammation plays a central role in hypertension. The gut receives significant sympathetic innervation, is densely populated with a diverse microbial ecosystem, and contains immune cells that greatly impact overall inflammatory homeostasis. Despite this uniqueness, little is known about the involvement of the gut in hypertension. OBJECTIVE Test the hypothesis that increased sympathetic drive to the gut is associated with increased gut wall permeability, increased inflammatory status, and microbial dysbiosis and that these gut pathological changes are linked to hypertension. METHODS AND RESULTS Gut epithelial integrity and wall pathology were examined in spontaneously hypertensive rat and chronic angiotensin II infusion rat models. The increase in blood pressure in spontaneously hypertensive rat was associated with gut pathology that included increased intestinal permeability and decreased tight junction proteins. These changes in gut pathology in hypertension were associated with alterations in microbial communities relevant in blood pressure control. We also observed enhanced gut-neuronal communication in hypertension originating from paraventricular nucleus of the hypothalamus and presenting as increased sympathetic drive to the gut. Finally, angiotensin-converting enzyme inhibition (captopril) normalized blood pressure and was associated with reversal of gut pathology. CONCLUSIONS A dysfunctional sympathetic-gut communication is associated with gut pathology, dysbiosis, and inflammation and plays a key role in hypertension. Thus, targeting of gut microbiota by innovative probiotics, antibiotics, and fecal transplant, in combination with the current pharmacotherapy, may be a novel strategy for hypertension treatment.
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Affiliation(s)
- Monica M Santisteban
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Yanfei Qi
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville.
| | - Jasenka Zubcevic
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Seungbum Kim
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Tao Yang
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Vinayak Shenoy
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Colleen T Cole-Jeffrey
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Gilberto O Lobaton
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Daniel C Stewart
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Andres Rubiano
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Chelsey S Simmons
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Fernando Garcia-Pereira
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Richard D Johnson
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Carl J Pepine
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville
| | - Mohan K Raizada
- From the Department of Physiology and Functional Genomics, College of Medicine (M.M.S., S.K., C.T.C.-J., G.O.L., M.K.R.), Division of Cardiovascular Medicine, Department of Medicine (Y.Q., C.S.S., C.J.P.), Department of Physiological Sciences, College of Veterinary Medicine (J.Z., T.Y., F.G.-P., R.D.J.), Department of Pharmacodynamics, College of Pharmacy (V.S.), J. Crayton Pruitt Family Department of Biomedical Engineering (D.C.S., C.S.S.); Mechanical and Aerospace Engineering, Herbert Wertheim College of Engineering (A.R., C.S.S.), University of Florida, Gainesville.
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49
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Voisey CR, Christensen MT, Johnson LJ, Forester NT, Gagic M, Bryan GT, Simpson WR, Fleetwood DJ, Card SD, Koolaard JP, Maclean PH, Johnson RD. cAMP Signaling Regulates Synchronised Growth of Symbiotic Epichloë Fungi with the Host Grass Lolium perenne. Front Plant Sci 2016; 7:1546. [PMID: 27833620 PMCID: PMC5082231 DOI: 10.3389/fpls.2016.01546] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2016] [Accepted: 10/03/2016] [Indexed: 05/04/2023]
Abstract
The seed-transmitted fungal symbiont, Epichloë festucae, colonizes grasses by infecting host tissues as they form on the shoot apical meristem (SAM) of the seedling. How this fungus accommodates the complexities of plant development to successfully colonize the leaves and inflorescences is unclear. Since adenosine 3', 5'-cyclic monophosphate (cAMP)-dependent signaling is often essential for host colonization by fungal pathogens, we disrupted the cAMP cascade by insertional mutagenesis of the E. festucae adenylate cyclase gene (acyA). Consistent with deletions of this gene in other fungi, acyA mutants had a slow radial growth rate in culture, and hyphae were convoluted and hyper-branched suggesting that fungal apical dominance had been disrupted. Nitro blue tetrazolium (NBT) staining of hyphae showed that cAMP disruption mutants were impaired in their ability to synthesize superoxide, indicating that cAMP signaling regulates accumulation of reactive oxygen species (ROS). Despite significant defects in hyphal growth and ROS production, E. festucae ΔacyA mutants were infectious and capable of forming symbiotic associations with grasses. Plants infected with E. festucae ΔacyA were marginally less robust than the wild-type (WT), however hyphae were hyper-branched, and leaf tissues heavily colonized, indicating that the tight regulation of hyphal growth normally observed in maturing leaves requires functional cAMP signaling.
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Affiliation(s)
- Christine R. Voisey
- Forage Science, AgResearch Ltd., Grasslands Research CentrePalmerston North, New Zealand
| | - Michael T. Christensen
- Formally of Forage Improvement, AgResearch Ltd., Grasslands Research CentrePalmerston North, New Zealand
| | - Linda J. Johnson
- Forage Science, AgResearch Ltd., Grasslands Research CentrePalmerston North, New Zealand
| | - Natasha T. Forester
- Forage Science, AgResearch Ltd., Grasslands Research CentrePalmerston North, New Zealand
| | - Milan Gagic
- Forage Science, AgResearch Ltd., Grasslands Research CentrePalmerston North, New Zealand
| | - Gregory T. Bryan
- Forage Science, AgResearch Ltd., Grasslands Research CentrePalmerston North, New Zealand
| | - Wayne R. Simpson
- Forage Science, AgResearch Ltd., Grasslands Research CentrePalmerston North, New Zealand
| | - Damien J. Fleetwood
- Biotelliga Ltd., Institute for Innovation in BiotechnologyAuckland, New Zealand
| | - Stuart D. Card
- Forage Science, AgResearch Ltd., Grasslands Research CentrePalmerston North, New Zealand
| | - John P. Koolaard
- Bioinformatics and Statistics Team, AgResearch Ltd., Grasslands Research CentrePalmerston North, New Zealand
| | - Paul H. Maclean
- Bioinformatics and Statistics Team, AgResearch Ltd., Lincoln Research CentreChristchurch, New Zealand
| | - Richard D. Johnson
- Forage Science, AgResearch Ltd., Grasslands Research CentrePalmerston North, New Zealand
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50
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Waterfield Price N, Johnson RD, Saenrang W, Maccherozzi F, Dhesi SS, Bombardi A, Chmiel FP, Eom CB, Radaelli PG. Coherent Magnetoelastic Domains in Multiferroic BiFeO_{3} Films. Phys Rev Lett 2016; 117:177601. [PMID: 27824475 DOI: 10.1103/physrevlett.117.177601] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2015] [Indexed: 06/06/2023]
Abstract
The physical properties of epitaxial films can fundamentally differ from those of bulk single crystals even above the critical thickness. By a combination of nonresonant x-ray magnetic scattering, neutron diffraction and vector-mapped x-ray magnetic linear dichroism photoemission electron microscopy, we show that epitaxial (111)-BiFeO_{3} films support submicron antiferromagnetic domains, which are magnetoelastically coupled to a coherent crystallographic monoclinic twin structure. This unique texture, which is absent in bulk single crystals, should enable control of magnetism in BiFeO_{3} film devices via epitaxial strain.
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Affiliation(s)
- N Waterfield Price
- Clarendon Laboratory, Department of Physics, University of Oxford, Parks Road, Oxford OX1 3PU, United Kingdom
- Diamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom
| | - R D Johnson
- Clarendon Laboratory, Department of Physics, University of Oxford, Parks Road, Oxford OX1 3PU, United Kingdom
- ISIS Facility, Rutherford Appleton Laboratory, Chilton, Didcot OX11 0QX, United Kingdom
| | - W Saenrang
- Department of Materials Science and Engineering, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA
| | - F Maccherozzi
- Diamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom
| | - S S Dhesi
- Diamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom
| | - A Bombardi
- Diamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom
| | - F P Chmiel
- Clarendon Laboratory, Department of Physics, University of Oxford, Parks Road, Oxford OX1 3PU, United Kingdom
| | - C-B Eom
- Department of Materials Science and Engineering, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA
| | - P G Radaelli
- Clarendon Laboratory, Department of Physics, University of Oxford, Parks Road, Oxford OX1 3PU, United Kingdom
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