Selection of tropical trees and shrubs for urban greening in coal mine complex: a case study of Singrauli, Madhya Pradesh

An experimental investigation was conducted to determine the effectiveness of roadside trees for removing dust and the effects of dust load on the physiology and micromorphology of the foliage. The present study was conducted near an open coal mining complex situated in Singrauli, Madhya Pradesh, India, to assess the air pollution tolerance index (APTI), anticipated performance index (API), dust capturing capacity (DCC), and leaf morphology of trees and shrubs growing around the coal fields. Results showed that Azadirachta indica, Mangifera indica, Ficus religiosa, Ailanthus excelsa, and Ficus benghalensis were the most tolerant species towards air pollution (high APTI scores), while plants like Calotropis gigantea, Lantana camara, and Tectona grandis were proven to be bio-indicator species. Butea monosperma, Ficus benghalensis, Alstonia scholaris, and Terminalia arjuna were plant species with the highest DCC. Two-way ANOVA showed significant differences site-wise and season-wise in the biochemical parameters of APTI and a considerable difference site-wise with respect to dust capturing capacity. Correlation and regression analyses revealed a very high positive correlation between APTI and ascorbic acid value. The study recommends suitable plant species to manage rising air pollution in the coal mine and nearby areas apart from suggesting the development of a green belt.

Garbage to Gains: The role of biochar in sustainable soil quality improvement, arsenic remediation, and crop yield enhancement

Threats of soil quality deterioration and metal pollution have inflicted several parts of the world, apart from the need for surplus crop production. The investigation used biochar prepared from waste biomasses such as wheat and rice straw, kitchen waste, leaf litter, Lantana camara, orange peel, and walnut shell to improve soil quality, reduce As pollution, and enhance plant growth. Biochars were amended at doses of 0%, 2.5%, 5%, and 7.5% and conditioned for 3 months. At a 7.5% dose, the maximum improvements in cation exchange capacity (a 62% increase), anion exchange capacity (a two-fold increase), bulk density (a 31% decrease), porosity (a 32% increase), water holding capacity (an 86% increase), soil respiration (a 32% increase), total carbon (a two-and-a-half-fold increase), total nitrogen (an eleven-fold increase), total phosphorus (3 times rise), total potassium (a two-and-a-half-fold increase), mobile As (a 38% decrease), leachable As (a 53% decrease), and bio-available As (a 56% decrease) were observed. Further, pot experiments revealed augmented biomass growth (61% and 177%), increased length (71% and 209%), and decreased As accumulation (56% and 55%) in the above-ground parts of Bengal gram and coriander plants, respectively. Therefore, the application of biochar was found to enhance the physico-chemical properties of soil, reduce As contamination levels, and improve crop growth. The study recommends using waste biomasses to prepare eco-friendly biochars, which could contribute to advancing sustainable agriculture and the circular economy.

Assessment of heavy metal contamination in street dust: concentrations, bioaccessibility, and human health risks in coal mine and thermal power plant complex

Coal mining has also been associated with adverse environmental and health impacts including cancer and respiratory disorders, with the presence of thermal power plants exacerbating the problem of heavy metal pollution. Minimal studies have been conducted on the environmental impacts, health risks, and bioaccessibility of heavy metals in coal mine areas. Consequently, samples of street dust were collected from different locations in the Singrauli mine complex and analysed. Heavy metals (Cu, Ni, Zn, Cr, Co, As, and Mo) were found to be higher than the background concentration, with the maximum concentration was found in areas close to the Thermal Power Plants, like Near Vindyachal TPP, Near Shakti Nagar TPP, and Anpara. The highest geo-accumulation index value was found for Co, Mo, Zn, and As, indicating moderate to strong pollution levels. Health risk assessment (for both adults and children) revealed that Cr and Fe posed significantly higher Hazard Quotient and Hazard Index (HI) values, indicating significant non-carcinogenic threats. Moreover, Carcinogenic Risk (CR) values for Cd, Cr, and Ni indicated a risk of carcinogenicity to the public exposed to road dust. The study also examined the bioaccessibility of the metals, which showed that the gastric phase accumulated a higher percentage of Ni (42.52%), Pb (34.79%), Co (22.22%), As (20%) and Cu (15%) than the intestinal phase. Strong positive correlation was observed between metal concentration (Cu, Pb, Cr, Fe, Zn, and Mn), HI, and CR of adult and child, while bioaccessibility of intestinal phase was positively correlated with gastric phase of metals (Cu, Ni, Co, As, and Mn).

A state-of-the-art review on cadmium uptake, toxicity, and tolerance in rice: From physiological response to remediation process

Cadmium (Cd), a major contaminant of concern, has been extensively reviewed and debated for its anthropogenic global shifts. Cadmium levels in rice grains raise wide food safety concerns. The aim of this review is therefore to capture the dynamics of Cd in paddy soil, translocation pathways of Cd from soil to consumption rice, and assess its bio-accessibility in human consumption. In crop plants, Cd reduces absorption of nutrients and water, triggers oxidative stress, and inhibits plant metabolism. Understanding the mechanisms and behaviour of Cd in paddy soil and rice allows to explain, predict and intervene in Cd transferability from soil to grains and human exposure. Factors affecting Cd movement in soil, and further to rice grain, are elucidated. Recently, physiological and molecular understanding of Cd transport in rice plants have been advanced. Morphological-biochemical characteristics and Cd transporters of plants in such a movement were also highlighted. Ecologically viable remediation approaches, including low input cost agronomic methods, phytoremediation and microbial bioremediation methods, are emerging.

Removal of toxic dye from dye-laden wastewater using a new nanocomposite material: Isotherm, kinetics and adsorption mechanism

In this study, (hemi)cellulosic biochar-based environment-friendly non-toxic nanocomposite (nAg-AC) was fabricated for an inordinate overlook of toxic dye-laden wastewater depollution. This hybrid nanocomposite grafted with silver nanoparticles, numerous hydroxyl and π-bond containing functional groups exhibited outstanding physicochemical properties. FESEM images indicated the heterogeneous porous structure of nAg-AC, while BET analysis revealed mesoporous property with a significant increment of overall surface area (132%). Imbedding of silver nanoparticles and the presence of multiple hydroxyl groups was evident from the XRD and XPS spectrum. Further, the TGA result indicated excellent thermal stability, and FTIR analysis suggested the involvement of surface functional groups like -OH, =C = O, =NH, =C = C = , and -CH in Rhodamine B (RhB) adsorption. The adsorbent matrix provided the overall mechanical strength and facilitated recycling, while the functional matrix (biochar) provided the adsorptive locus for augmented RhB adsorption efficiency (92.77%). Experiments pertaining to adsorption isotherms and kinetics modeling suggested that RhB was removed through multilayer chemisorption on the heterogeneous nAg-AC surface. The main RhB adsorption mechanism included cumulative efforts of H-bindings, π-π stacking interaction, pore-filling, and electrostatic interactions. The nAg-AC maintained mechanical robustness with significant RhB adsorption even after three consecutive regeneration cycles signifying facile recycling. The nAg-AC displayed an outstanding efficacy for the real industrial wastewater depollution, indicating high effectiveness for practical environmental applications. Finally, the cost analysis (incorporating economic, environmental, and social dimensions) suggested a significant role of the nAg-AC in promoting and establishing sustainable development with the circular economy.

Valorization of fruit waste-based biochar for arsenic removal in soils

Fruit waste disposal is a serious global problem with only 20% of such waste being routinely treated prior to discharge. Two of the most polluting fruit wastes are orange peel and walnut shell and new methods are urgently required to valorize such waste. In the present study, they where valorized via conversion into biochars at 500 °C (OPB500 for orange peel-based biochar produced at 500 °C and WaSB500 for walnut shell-based biochar produced at 500 °C), and evaluated for arsenic adsorption. A pore-rich surface morphology was observed with a low H/C ratio indicating high stability. Spectroscopic studies revealed the presence of minerals and surface functional groups (amide, carbonyl, carboxyl, and hydroxyl) suggesting high potential for arsenic immobilization. Adsorption studies revealed an arsenic removal efficiency of 88.8 ± 0.04% for WaSB500 exposed to initial arsenic concentration of 8 ppm for 5% biochar dose at 25 °C and 30 min contact time. In comparison, OPB500 showed slightly lower removal efficiency of 80.7 ± 0.1% (10 ppm initial concentration, 5% dose, 25 °C, 90 min contact time). Peak shifts in XRD and FTIR spectra together with isotherm, kinetic, and thermodynamic studies suggested arsenic sequestration was achieved via a combination of chemisorption, physisorption, ion exchange, and diffusion. The present investigation suggests valorization of fruit waste into thermo-stable biochars for sustainable arsenic remediation in dynamic soil/water systems and establishes biochar's importance for waste biomass minimization and metal (loid) removal from fertile soils.

Lead time of early warning by wastewater surveillance for COVID-19: Geographical variations and impacting factors

The global data on the temporal tracking of the COVID-19 through wastewater surveillance needs to be comparatively evaluated to generate a proper and precise understanding of the robustness, advantages, and sensitivity of the wastewater-based epidemiological (WBE) approach. We reviewed the current state of knowledge based on several scientific articles pertaining to temporal variations in COVID-19 cases captured via viral RNA predictions in wastewater. This paper primarily focuses on analyzing the WBE-based temporal variation reported globally to check if the reported early warning lead-time generated through environmental surveillance is pragmatic or latent. We have compiled the geographical variations reported as lead time in various WBE reports to strike a precise correlation between COVID-19 cases and genome copies detected through wastewater surveillance, with respect to the sampling dates, separately for WASH and non-WASH countries. We highlighted sampling methods, climatic and weather conditions that significantly affected the concentration of viral SARS-CoV-2 RNA detected in wastewater, and thus the lead time reported from the various climatic zones with diverse WASH situations were different. Our major findings are: i) WBE reports around the world are not comparable, especially in terms of gene copies detected, lag-time gained between monitored RNA peak and outbreak/peak of reported case, as well as per capita RNA concentrations; ii) Varying sanitation facility and climatic conditions that impact virus degradation rate are two major interfering features limiting the comparability of WBE results, and iii) WBE is better applicable to WASH countries having well-connected sewerage system.

Biochar-based nanocomposite from waste tea leaf for toxic dye removal: From facile fabrication to functional fitness

The present study utilized discarded tea leaf waste to produce 'Tea leaf biochar' (TLB) as the functional matrix for the fabrication of hybrid nanocomposite (nAg-TC), with colloidal deposition of silver nanoparticles (nAg) via modified chemical co-precipitation, for treatment of dye-laden wastewater. The chemical composition, physicochemical properties, and morphology of nAg-TC, and active surface functional groups involved in adsorption were identified using BET, FESEM-EDX, FTIR, TGA, XPS, and XRD. The nAg-TC matrix was found to be heterogeneous, mesoporous, thermostable, with rich in active surface functional groups (-OH, =NH, =CH, CC, CO, CN, and CC), and nAg as a dopant material. The dye adsorption results indicated the maximum removal efficiency (RhB = 95.89%, CR = 94.10%) at 300 K for rhodamine B (RhB) and Congo red (CR) concentrations of 25 mg L^-1 and 22.5 mg L^-1, respectively. The present investigation agreed with Freundlich isotherm (R²_CR:0.991; R²_RhB:0.993) and pseudo-second order kinetic (R²_CR:0.999; R²_RhB:0.999) model, indicating overall adsorption of RhB and CR through spontaneous and exothermic chemisorption on the heterogeneous surface of nAg-TC. The mechanism of RhB and CR adsorption was complex where nAg-TC, possessing the synergistic effects of TLB and nAg, showed surface complexation, electrostatic attraction, and H-bonding, leading to chemisorption. Study showed excellent reusability of spent nAg-TC, and commendable treatment efficiency for dye-laden real industrial effluents. The study exhibits substantial techno-economic feasibility of adsorbent and translates the principles of circular economy into synthesis of value-added products through sustainable management of biowaste and bioresource.

Removal of Arsenic by Wheat Straw Biochar from Soil

Biochar prepared from wheat straw (Triticum aestivum) at different pyrolysis temperatures was screened, followed by its application to soil for arsenic removal in the present study. Characterization of biochar by Field emission scanning electron microscope studies and Fourier thermal Infrared imaging showed smooth and porous biochar surface and abundance of surface functional groups. A low value of H/C was obtained by CHNS analyzer, indicating high stability of biochar. The surface area was 15.86 m²/g on an average. Batch sorption experiments were carried out to optimize conditions for arsenic sorption. Maximum arsenic removal of 83.7% was obtained when applied at a 7.5% dose for a contact time of 60 min at 25 °C. Isotherm, kinetic and thermodynamic studies revealed the feasibility of sorption and removal of arsenic through physisorption, chemisorption, ion exchange, and diffusion.

Ecological and human health risks from pseudo-total and bio-accessible metals in street dusts

Street dust samples were collected from industrial and commercial cities (Jamshedpur and Ranchi during monsoon and post-monsoon seasons) for detecting the levels of Cr, Cd, Cu, Ni, Pb, Zn, As, Co, Al, and Mn. The industrial city recorded higher metal concentrations compared to commercial. Similar trend of pseudo-total metal concentrations was observed in both the seasons at industrial city (Al > Mn > Zn > Cr > Pb > Cu > Ni > Cd) and only monsoon season at commercial city (Al > Mn > Zn > Cu > Cr > Pb > Ni > Cd). Zn > Cd was the most bioaccessible metal throughout the cities (monsoon and post-monsoon). The geochemical parameters (Igeo, EF, CF) were highest for Cd and lowest for Ni (both cities for the two seasons). Pollution Load Indices (PLI zone) were highest during the post-monsoon season in the industrial city. The highest carcinogenic risk was posed by Cr ranging from 1.87E-05 to 4.80E-05, in both the cities through ingestion and inhalation pathways. Children were found at higher risks, while the bioaccessible fractions posed neither carcinogenic nor non-carcinogenic threats to the population. Principal component analysis and correlation analysis indicated the influence of vehicular and industrial emissions, especially steel industry and coal-based thermal power plants as the major source of metals in street-dust. The outcomes of this work will be useful in providing baseline information of pollution along with their consequent environmental and human health risks of Jharkhand state.

Potential and safe utilization of Fly ash as fertilizer for Pisum sativum L. Grown in phytoremediated and non-phytoremediated amendments

The present study focuses on the possibility of applying fly ash to agricultural fields for enhancing the production of agricultural crops. In this study, Pisum sativum L. was grown from germination stage to maturation stage in phytoremediated and non-phytoremediated or raw fly ash-amended soil. All the morphological (height, biomass, number of leaf, and leaf size) and physiological parameters like, protein content, chlorophyll content, nitrate reductase activity, and peroxidase activity were monitored to understand the effects of fly ash or its usefulness for using it as a fertilizer for facilitating micronutrients. Major finding of this study is that 40% (w/w) of non-phytoremediated fly ash amendment could be used for field application. Percentage increase of toxic metals in below ground organs was 6% for Cd, 6% for Cr, 5% for Cu, 15% for Mn, and 7% for Pb when compared with the control. In the non-phytoremediated fly ash-amended set, heavy metals and metalloids were present in the grains only at higher amendments T3 (60%) and T4 (80%). However, except Cd, all the metals were below the permissible limits suggested by the WHO. Phytoremediated fly ash could be used as a fertilizer up to 100% for the cultivation of pea plant as metals concentrations were found either below detection limit or below the WHO permissible limit.

Performance evaluation of crop residue and kitchen waste-derived biochar for eco-efficient removal of arsenic from soils of the Indo-Gangetic plain: A step towards sustainable pollution management

Biochar was produced from wheat straw (Triticum aestivum), rice straw (Oryza sativa), and kitchen waste at varying pyrolysis temperatures (300°C-700 °C). The biochars were screened depending on their production and physicochemical properties for the adsorptive removal of arsenic (As). The morphological analysis by Field emission scanning electron microscope revealed a porous biochar surface. Spectroscopic characterization of biochars indicated the co-existence of minerals, carboxyl, carbonyl, amide, and hydroxyl groups, which implies the suitability of biochar to immobilize metal (loid)s from soils. Changes in peaks were observed in Fourier-transform infrared and X-ray diffraction images after As sorption indicating the involvement of chemisorption. The thermogravimetric analysis and a low H/C value derived from the CHNS analyzer confirmed the high stability of biochar. The BET analysis was used to estimate the surface areas of wheat straw (15.8 m² g^-1), rice straw (12.5 m² g^-1), and kitchen waste (2.57 m² g^-1) -derived biochars. Batch sorption studies were performed to optimize experimental parameters for maximum removal of As. Maximum removal of As was observed for wheat straw-derived biochar (pyrolyzed at 500 °C) at 8 mg L^-1 initial concentration (IC), 7.5 % dose, 25 °C temperature, and 60 min contact time (83.7 ± 0.06 %); in rice straw-derived biochar (pyrolyzed at 500 °C) at 8 mg L^-1 IC, 7.5 % dose, 25 °C temperature, 90 min contact time (83.6 ± 0.37 %); and in kitchen waste-derived biochar (pyrolyzed at 500 °C) at 8 mg L^-1 IC, 5 % dose, 25 °C temperature, 60 min contact time (76.7 ± 0.16 %). The sorption model parameters suggested the possibility of chemisorption, physisorption, diffusion, and ion exchange for the removal of As. Therefore, it could be recommended to farmers that instead of disposing or burning straws and waste openly, they could adopt the process of charring to generate livelihood security and mitigation of geogenic contaminants from the soil/water dynamic systems.

Air pollution tolerance, metal accumulation and dust capturing capacity of common tropical trees in commercial and industrial sites

Total nine tree species of common tropical trees were assessed for their air pollution tolerance, dust capturing capacity and possibility to act as metal bio-monitors in commercial, industrial and control sites. Two seasons sampling was done respectively in monsoon and post-monsoon, to study their seasonal variations. According to Air Pollution Tolerance Index (APTI) values Mangifera indica, Azadirachta indica and Ficus religiosa were the most tolerant species while Ficus bengalensis and Alstonia scholaris were intermediately tolerant towards air pollution. Single factor ANOVA of biochemical parameters between the sampling sites, revealed that APTI of plants did not vary significantly in both the seasons. Site-wise variation was significant both at commercial and industrial sites. The same trend of result was also found in Anticipated Performance Index (API) which also includes other social benefits. So, these species can be recommended for the green belt development in urban commercial and industrial areas. Ficus bengalensis, Ficus religiosa and Mangifera indica were also having the best dust capturing capacity as Scanning Electron Microscope image revealed that they have rough and large surface area of leaf with short petiole and large canopy structure. According to the Geoaccumulation index (Igeo) and Enrichment Factor (EF) of soil in the sampling sites were found to be contaminated with copper and cadmium. Psidium guajava, Mangifera indica, Alstonia scholaris and Ficus religiosa were found to be good phytoextractors of copper. They did not accumulate cadmium. So, these plants can be recommended as copper bioindicators. However, the metals accumulation efficiencies were high for Mangifera indica and Ficus religiosa.

Effect of two biodegradable chelates on metals uptake, translocation and biochemical changes of Lantana Camara growing in fly ash amended soil

The present work had two purposes firstly to evaluate the potential of Lantana Camara for phytoextraction of heavy metals from fly ash amended soil and to assess the suitability of a proper biodegradable chelating agent for chelate assisted phytoextraction. Plants were grown in manure mixed soil amended with various concentration of fly ash. Two biodegradable chelating agents were added (EDDS and MGDA) in the same dose separately before maturation stage. Sampling was done at different growing stages. The plant took up metal in different plant parts in the following order: for Cu, and Zn leaf >root >stem, for Cr and Mn leaf>stem >root, for Ni root >leaf>stem and for Pb root≈leaf>stem respectively. For Cu, Zn, Cr and Mn Lantana camara acted as phytoextractor. Translocation factor and bioaccumulation coefficient was>1 signifying enrichment and translocation of metals in the plant. Morphological studies showed no toxicity symptom in the plant. Among biochemical parameters protein and nitrate reductase activity decreased, whereas, chlorophyll and peroxidise activity increased with the growth stages. Finally, it was evident from the results that Lantana Camara can be used as efficient phytoextractor of metals, with proper harvesting cycle and both chelate were proved as effective chelators for phytoextraction of metals.

Assessment of soil characteristics in the vicinity of open cast coal mine and its suitability for vegetative reclamation in Charhi and Kuju of Jharkhand, India

Coal mining is inevitable for economic growth of a country, but at the same time deteriorates the quality of the environment. Open cast mine, especially affects the top soil most negatively. In the present study, soil samples from three representative areas of mining viz proposed, operational and abandoned sites from Charhi and Kuju of Jharkhand were collected and analysed for physicochemical parameters and metals with an objective to determine their suitability for vegetative reclamation. Soil samples appeared to be slightly acidic (5.97 ± 0.66) with low EC values (101 ± 76 μScm(-1)), total organic carbon (0.71 ± 0.35 %), organic matter (1.34 ± 0.66%) and overall nutrient, especially nitrogen (167 ± 64 kg ha(-1)) contents than required for reclamation by revegetation. However, bulk density was found conducive for reclamation. Total Cr (317 ± 287 to 417 ± 393 mg kg(-1)), Cu (121 ± 72 to 344 ± 143 mg kg(-1)), Ni (171 ± 46 to 373 ± 134 mg kg(-1)) and Pb (114 ± 115 to 182 ± 145 mg kg(-1)) content were found to be higher in soil. Sitewise variation was also significant for Cu and Ni. Pearson's correlation suggested significant (p ≤ 0.05) positive inter elemental correlation between Cr-Fe, Cr-Mn, Cu-Ni, Fe-Mn and Mn-Ni. Positive geoaccumulation index (Igeo) values for all the metals except Fe, overall contamination degree of 31.10 and significant enrichment factor indicated considerable contamination. This baseline data could be utilized for vegetative reclamation planning of the study area in future.

Metal phytoremediation potential of naturally growing plants on fly ash dumpsite of Patratu thermal power station, Jharkhand, India

Three naturally growing plants Ipomoea carnea, Lantana camara, and Solanum surattense were found in fly ash dumpsite of Patratu thermal power station, Jharkhand, India. They were assessed for their metal uptake potential. The fly ash was slightly alkaline with very less nitrogen and organic carbon but enriched with phosphorus and heavy metals. Lantana camara and Ipomoea carnea showed good translocation from root to shoot for most of the metals except Mn and Pb. The order of metal accumulation in stem of both the plants were Fe(205mg/kg)>Mn(65mg/kg)>Cu(22.35mg/kg)>Pb(6.6mg/kg)>Cr(3.05mg/kg)>Ni(1 mg/kg)>Cd(0.5 mg/kg) and Fe(741 mg/kg)>Mn(154.05 mg/kg)>Cu(20.75 mg/kg)>Pb(6.75 mg/kg)>Ni(4.0 mg/kg)>Cr(3.3mg/kg)>Cd(0.05mg/kg), respectively. But Solanum surattense accumulated most of the metals in roots. The order was in the following order, Mn (382.2mg/kg) >Fe (264.1mg/kg) > Cu (25.35mg/kg) >Pb (5.95 mg/kg) > Ni (1.9 mg/kg) > Cr (1.8mg/kg) > Cd (0.55 mg/kg). The order of Bioconcentration factor (BCF) in root and shoot followed almost the same order as, Mn>Fe>Ni>Pb>Cu>Cr≈ Cd in all the three species. ANOVA showed significant variation in metal accumulation by root and stem between the species. Finally, it can be concluded that Solanum surattense can be used as phytostabilizer and other two species as phytoextractor of metal for fly ash dumpsite reclamation.

Co-existence of psoriasis and melanoma in a large urban academic centre population: a cross-sectional retrospective study

BACKGROUND

Psoriasis has been linked to increased malignancy risk, particularly lympho-haematopoietic and non-melanoma skin cancers; however, its association with cutaneous melanoma remains unclear.

OBJECTIVE

The aim of this study was to determine if there is an association between melanoma and psoriasis in a large, urban academic population through an electronic medical record database.

METHODS

We searched our institution's electronic medical record database (EDW-Electronic Data Warehouse) from 1/2001 to 11/2013. Subjects were identified by ICD-9 codes. Melanoma diagnosis was included only if documented at least 1 month after the psoriasis diagnosis was documented. Odds ratio (OR) was obtained for association between cutaneous melanoma and psoriasis. The OR was then adjusted for phototherapy and age. To minimize detection bias, we also obtained the OR for association between cutaneous melanoma and atopic dermatitis.

RESULTS

We identified 10 947 patients with psoriasis, 64 of whom had a subsequent diagnosis of cutaneous melanoma. We detected a significant association between melanoma and psoriasis (OR = 1.77; 95%CI 1.38-2.26; P < 0.0001; total n = 1 525 252). After adjusting for phototherapy and age, a statistically significant association between melanoma and psoriasis remained detectable (OR = 1.9; 95%CI 1.55-2.55; P < 0.0001 and OR = 1.64; 95%CI 1.17-2.26; P = 0.003 respectively). The OR for melanoma with atopic dermatitis in the same patient database showed a statistically significant inverse association between the two diseases (OR = 0.35; 95%CI 0.16-0.73; P = 0.005).

CONCLUSION

Our findings show a statistically significant association between psoriasis and melanoma. After adjusting the OR for phototherapy and age, a statistically significant association remained. Further investigations exploring these associations are warranted in order to establish the relative risk for melanoma in psoriasis patients.

Benthic macroalgae as biological indicators of heavy metal pollution in the marine environments: a biomonitoring approach for pollution assessment

Metal pollution in the marine coastline environment is an important topical issue in the context of ecological disturbance and climate change. Heavy metal contaminations (Cd, Cr, Cu, Mn, Ni, Pb and Zn) in seawater and surficial sediments, as well as macroalgal diversity, were determined in six different locations along the coast of the Gulf of Kutch in India. The marine coastline environment was found to be enriched with Cd and Zn in comparison to other metals. Significant (p ≤ 0.05) inter-elemental positive-correlations were observed between Fe-Mn, Fe-Cu, Fe-Cr, Fe-Zn, Cr-Cu, Cu-Mn, and Cd-Zn, as well as negative-correlations between Cd-Pb, Ni-Pb, and Zn-Pb. Though genus specific macroalgal responses to heavy metal accumulation were significant, species specific response was insignificant (p ≤ 0.05). The relative abundance of metals in macroalgae followed the order of Fe>Zn>Mn>Cu>Cd>Cr>Ni>Pb. The high uptake of metals in green algae (Ulva lactuca and Enteromorpha intestinalis) and brown algae (Padina gymnospora and Dictyota bartayresiana) suggested that these algae may be used as potential biomonitors for heavy metal pollution. Three pollution indicators, Contamination Factor (CF), Enrichment Factor (EF) and Geochemical Index (Igeo) were calculated to determine the degree of metal pollution in the marine coastline and the contribution of anthropogenic influence.

Umbilical Myiasis in a Newborn: a case report

Myiasis is an infection of live mammalian tissue by the larval forms of dipteran flies, usually infects domestic and wild animal but human may be affected sometimes. Although adult cases have been reported, neonatal myiasis is a rare condition. Umbilical myiasis is very rare in newborns with few reported cases in the literature. In this article we are reporting an eight day old female neonate from urban slum area in West Bengal (India) presented with umbilical myiasis and omphalitis. She was infected with Chrysomya spp. larvae, was clinically well. Journal of College of Medical Sciences-Nepal, 2012, Vol-8, No-4, 42-45 DOI: http://dx.doi.org/10.3126/jcmsn.v8i4.8700  

A note on two-sample tests for comparing intra-individual genetic sequence diversity between populations

Gilbert, Rossini, and Shankarappa (2005, Biometrics 61, 106-117) present four U-statistic based tests to compare genetic diversity between different samples. The proposed tests improved upon previously used methods by accounting for the correlations in the data. We find, however, that the same correlations introduce an unacceptable bias in the sample estimators used for the variance and covariance of the inter-sequence genetic distances for modest sample sizes. Here, we compute unbiased estimators for these and test the resulting improvement using simulated data. We also show that, contrary to the claims in Gilbert et al., it is not always possible to apply the Welch-Satterthwaite approximate t-test, and we provide explicit formulas for the degrees of freedom to be used when, on the other hand, such approximation is indeed possible.

Long term effect of monosodium glutamate in liver of albino mice after neo-natal exposure

Mono Sodium Glutamate (MSG) is a naturally occurring excitatory neurotransmitter. It is extensively used as a food additive and flavoring agent for its UMAMI taste. Simultaneously it is being implicated for varied pathological condition like obesity, gonadal dysfunction, learning difficulty etc. It produces oxygen derived free radicals and metabolized in liver. Neonate mice are sensitive and suffer from adverse effects. Present work was undertaken to study the long term effects on histology of liver following MSG injection in neonates. The changes in the liver parenchyma of 75 days old mice showed variable changes. Areas around central vein were most affected. The liver cords were disrupted, dilated sinusoids, prominent Kupffer cells with accumulation of particulate matter.There were inflammatory cells around central vein. The hepatocyte cell membrane were disrupted, cytoplasm vacuolated, nucleus were pyknotic. Even the normal looking cells showed depletion of PAS +ve material in the cytoplasm.The long term effect on histology showed moderate and patchy hepatocellular damage.

Heavy metal uptake and its effect on macronutrients, chlorophyll, protein, and peroxidase activity of Paspalum distichum grown on sludge-dosed soils. Heavy metal uptake and its effect on P. distichum

This study assessed the heavy metal (Cr, Mn, Ni, Cu, Zn, and Pb) uptake and its effect on biochemical parameters in Paspalum distichum, a wetland plant. Sludge collected from Bhalswa waste dump, New Delhi, was used as heavy metal source and dosed in different proportions viz. 20%, 40%, 60%, and 80% to the garden soil. The plants accumulated metals mostly in belowground organs. The metal accumulation followed the order: Cr>Mn>Cu>Zn>Ni>Pb. The range of heavy metal concentration in tissue of belowground organs after 180 days of growth was 1,778.65-4,288.01 ppm Cr, 828.11-1,360 ppm Mn, 236.52-330.07 ppm Ni, 155.79-282.35 ppm Cu, 27.05-91.16 ppm Zn, and 27.09-50.87 ppm Pb. The biochemical parameters viz. chlorophyll and protein contents and peroxidase (POD) activity exhibited no considerable adverse effect indicating the plants' tolerance towards heavy metals. The high POD activity and synthesis of new protein bands at high sludge-dosed plants were also in support of this fact.

Biodegradation of phenol by native microorganisms isolated from coke processing wastewater

The present investigation was undertaken to assess the biodegradation of phenol by native bacteria strains isolated from coke oven processing wastewater. The strains were designated ESDSPB1, ESDSPB2 and ESDSPB3 and examined for colony morphology Gram stain characters and biochemical tests. Phenol degrading performance of all the strains was evaluated initially. One of the strains namely ESDSPB2 was found to be highly effective for the removal of phenol, which was used as sole carbon and energy source. From an initial concentration of 200 mg I(-1) it degraded to 79.84 +/- 1.23 mg l(-1). In turn the effect of temperature (20 to 45 degrees C), pH (5-10) and glucose concentration (0, 0.25 and 0.5%) on the rate of phenol degradation by that particular strain was investigated. Observations revealed that the rate of phenol biodegradation was significantly affected by pH, temperature of incubation and glucose concentration. The optimal conditions for phenol removal were found to be pH of 7 (84.63% removal), temperature, 30 degrees C (76.69% removal) and 0.25% supplemented glucose level (97.88% removal). The main significance of the study is the utilization of native bacterial strains from the waste water itself having potential of bioremediation.

Isolation and characterization of high quality DNA from marine benthic macroalgae

The isolation of high quality DNA is essential for many molecular biology applications including polymerase chain reaction (PCR) and endonuclease restriction digestion based techniques. An easy and inexpensive protocol has been developed for extracting genomic DNA from seven species of algae viz. Lola capillaries, Enteromorpha intestinalis, Ulva lactuca and Rhizoclonium sp belonging to Chlorophyceae, Catenella nipae, Polysiphonia mollis belonging to Rhodophyceae and Dictyota ceylanica belonging to Phaeophyceae group were collected from the coastal regions of Sunderban delta in West Bengal, India dominantly growing on mud flats, bark of different mangrove trees, pneumatophores, stilt roots, concrete surfaces, wooden and bamboo poles, sides of the boats and other water vehicles inundated during high tides. The DNA was found suitable for restriction endonuclease digestion and PCR amplification with randomely amplified polymorphic DNA (RAPD) primers. The A260/A280 ratio of 1.15 0.14 to 1.94 indicated little contamination from proteins and polysaccharides. The PCR amplification with RAPD primers showed its suitability in PCR based techniques and the restriction digestion with Eco RV confirmed its suitability for hybridization based techniques. The protocol is equally good for isolating DNA from both fresh as well as preserved materials.

Heavy metal uptake by Scirpus Littoralis Schrad. from fly ash dosed and metal spiked soils

Scirpus littoralis is a wetland plant commonly found in Yamuna flood plains of Delhi, India. The ability of Scirpus littoralis to take up and translocate five metals- Mn, Ni, Cu, Zn and Pb from fly ash dosed and metal spiked soils were studied under waterlogged and field conditions for 90 days. Scirpus littoralis accumulated Mn, Ni, Cu, Zn and Pb upto a maximum of 494.92, 56.37, 144.98, 207.95 and 93.08 ppm dry wt., respectively in below ground organs (BO) in 90 days time. The metal content ratios BO/soil (B/S) were higher than shoot/soil ratios (T/S) for all the metals, the highest being for Ni. Metal ratios BO/water (B/W) were also higher than shoot/water (T/W) ratios but the B/W ratio was maximum for Zn. The changes in nutrient status (N, P) in soil water and plants were also studied at interval of 30 days. The Pearson's correlation between metal uptake and N, P uptake were calculated. All the metals except Ni showed negative correlation with nitrogen but they were all non-significant. However, P uptake showed positive correlations with all the metals and all were significant at 1% confidence limit.

Primary electron-transfer dynamics in 2-phenylindole-9-cyanoanthracene system. A comparative study with 2-methylindole

Electrochemical measurements by cyclic voltammetry predict the possibility of occurrence of photoinduced electron-transfer (PET) reactions between the ground state of 2-phenylindole (2PI) (electron donor) and the excited singlet of 9-cyanoanthracene (9CNA) molecule acting as an electron acceptor. However, 2PI should be expected to behave as a relatively weaker electron donating agent than the structurally related donor 2-methylindole (2MI) as it possesses higher oxidation potential value. Both steady-state and time-resolved spectroscopic measurements in the polar acetonitrile (ACN) and ethanol (EtOH) solvents show that the fluorescence quenching phenomenon of 9CNA in presence of 2PI is primarily due to the involvement of dynamic process which in high probability should be PET. Nevertheless, in less polar tetrahydrofuran (THF) medium, the quenching of 9CNA results from the combined effect of dynamic and static modes. The transient absorption spectra, measured by using nanosecond laser flash photolysis, of 9CNA in presence of 2PI exhibit the signature of the bands of the anionic species of 9CNA, cation of the donor 2PI and the contact neutral radical. Observations of the transient absorption at the different delays infer that ion-recombination mechanism is responsible for production of the monomeric triplets of both 9CNA and 2PI. From the transient absorption decays in ACN medium, it has been demonstrated that the diffusional separation of ions from geminate ion-pair is facilitated in the case of 2MI-9CNA pair whereas for 2PI-9CNA system the energy wasting charge recombination dominates over the process of charge dissociation. From the above observations, the possibility of developing much potential photosynthetic model compounds with the donor 2MI, rather than with the other donor 2PI molecule has been hinted.

Non-radiative depletion of the excited electronic states of 9-cyanoanthracene in presence of tetrahydronaphthols

Both steady state and time resolved spectroscopic measurements reveal that the prime process involved in quenching mechanism of the lowest excited singlet (S1) and triplet (T1) states of the well known electron acceptor 9-Cyanoanthracene (9CNA) in presence of 5,6,7,8-tetrahydro-1-naphthol (TH1N) or 5,6,7,8-tetrahydro-2-naphthol (TH2N) is H-bonding interaction. It has been confirmed that the fluorescence of 9CNA is not at all affected in presence of 5,6,7,8-tetrahydro-2-methoxy naphthalene (TH2MN) both in non-polar n-heptane (NH) and highly polar acetonitrile (ACN) media. This indicates that the H-bonding interaction is crucial for the occurrence of the quenching phenomenon observed in the present investigations with TH1N (or TH2N) donors and 9CNA acceptor. In ACN solvent both contact ion-pair (CIP) and solvent-separated (or dissociated) ions are formed due to intermolecular H-bonding interactions in the excited electronic states (both singlet and triplet). In NH environment due to stronger H-bonding interactions, the large proton shift within excited charge transfer (CT) or ion-pair complex, 1 or 3(D+-H...A-), causes the formation of the neutral radical, 3(D+H-A)*, due to the complete detachment of the H-atom. It is hinted that both TH1N and TH2N due to their excellent H-bonding ability could be used as antioxidants.

Preferential association of the heat-stable enterotoxin gene (stn) with environmental strains of Vibrio cholerae belonging to the O14 serogroup

Toxigenic Vibrio cholerae O1 and O139 serogroups have the capacity of causing epidemic and pandemic cholera but are infrequently found in the environment. The other serogroups are abundant in aquatic environments but do not possess the virulence genes necessary for causing the disease. Of the 559 environmental strains of V. cholerae, collected during different periods from environmental samples in Calcutta, 9 (1.6%) harboured the heat-stable enterotoxin gene (stn). Six of the 9 strains belonged to the O14 serogroup. Thus, V. cholerae strains carrying the stn gene revealed preferential association with the O14 serogroup. Three of the six strains harboured the tcpA gene of the E1 Tor type, which is an unusual feature among environmental V. cholerae strains. A strain that possessed the E1 Tor type tcpA also had the CTX prophage. Pulsed field gel electrophoresis (PFGE) revealed that the stn gene positive O14 strains of V. cholerae were not clonal.

Side bias and accidents: are they related?

This study purports to examine the role of different forms of side bias, handedness, footedness, eyedness, and earedness, in eliciting accident-proneness in individuals. A representative sample (N = 150) was administered a Side Bias Questionnaire (Handedness: 22 items, footedness: 5 items, eyedness: 5 items, earedness: 5 items) to ascertain their preferential bias. The questionnaire also required subjects to report the number of accidents committed during their lifetime while performing activities like sports, driving, household work, etc., that required attention of medical professionals. Regression analysis of data indicated that accident-prone behavior was significantly predicted from handedness. Analysis of variance, 3 (Accident groups: low, moderate, high) x 4 (Side bias: hand, foot, eye, ear), indicated that 'mixed' handers committed more accidents as compared with clear handers. The other forms of side bias, foot, ear, and eye were unrelated to frequency of accidents.

Using human immunodeficiency virus type 1 sequences to infer historical features of the acquired immune deficiency syndrome epidemic and human immunodeficiency virus evolution

In earlier work, human immunodeficiency virus type 1 (HIV-1) sequences were analysed to estimate the timing of the ancestral sequence of the main group of HIV-1, the virus that is responsible for the acquired immune deficiency syndrome pandemic, yielding a best estimate of 1931 (95% confidence interval of 1915-1941). That work will be briefly reviewed, outlining how phylogenetic tools were extended to incorporate improved evolutionary models, how the molecular clock model was adapted to incorporate variable periods of latency, and how the approach was validated by correctly estimating the timing of two historically documented dates. The advantages, limitations, and assumptions of the approach will be summarized, with particular consideration of the implications of branch length uncertainty and recombination. We have recently undertaken new phylogenetic analysis of an extremely diverse set of human immunodeficiency virus envelope sequences from the Democratic Republic of the Congo (the DRC, formerly Zaire). This analysis both corroborates and extends the conclusions of our original study. Coalescent methods were used to infer the demographic history of the HIV-1 epidemic in the DRC, and the results suggest an increase in the exponential growth rate of the infected population through time.

Serodiagnosis of ascariasis with specific IgG4 antibody and its use in an epidemiological study

In an earlier study Ascaris-specific IgG4 antibody was found to be elevated in cases of ascariasis. However, the usefulness of the elevated levels of this antibody in Ascaris infection as a diagnostic marker has not been well established. In India, in early 1999, blood samples of 83 cases of Ascaris infection, 35 cases of other nematode infection and 53 control subjects (without any helminth infection) were tested for anti-Ascaris IgG4 by ELISA. Further anti-Ascaris IgG4 levels in the blood of Ascaris-infected patients were determined, after eradication of the worms with drugs, at regular intervals to ascertain the duration of elevation of titre of the serological marker following initial infection. This information would indicate the sensitivity of the test as a diagnostic marker for recent infection. Blood samples of 422 rural people were also tested for anti-Ascaris IgG4 titre to ascertain the prevalence of ascariasis in the community. High levels of anti-Ascaris IgG4 antibody (OD 1.246 +/- 0.212) were found in all the 83 Ascaris-infected subjects compared to controls (OD 0.158 +/- 0.047). Anti-Ascaris IgG4 antibody levels of other nematode-infected subjects were comparable to the controls. Anthelmintic treatment of 8 Ascaris-infected subjects caused sequential fall of IgG4 level in their blood, and its titre reached control level within 6 months of deworming. Of 422 individuals from the rural community 229 (54.3%) had significantly high levels of specific IgG4 antibody against Ascaris excretory-secretory antigen, suggesting that they were infested with Ascaris. Thus, this study demonstrated that anti-Ascaris IgG4 antibody is a very sensitive and specific marker for the diagnosis of Ascaris infection. Utilizing this test, a significant number of a rural population could be diagnosed with Ascaris infection in West Bengal, India.

Continuous quantum measurement and the emergence of classical chaos

We formulate the conditions under which the dynamics of a continuously measured quantum system becomes indistinguishable from that of the corresponding classical system. In particular, we demonstrate that even in a classically chaotic system the quantum state vector conditioned by the measurement remains localized and, under these conditions, follows a trajectory characterized by the classical Lyapunov exponent.

Timing the ancestor of the HIV-1 pandemic strains

HIV-1 sequences were analyzed to estimate the timing of the ancestral sequence of the main group of HIV-1, the strains responsible for the AIDS pandemic. Using parallel supercomputers and assuming a constant rate of evolution, we applied maximum-likelihood phylogenetic methods to unprecedented amounts of data for this calculation. We validated our approach by correctly estimating the timing of two historically documented points. Using a comprehensive full-length envelope sequence alignment, we estimated the date of the last common ancestor of the main group of HIV-1 to be 1931 (1915-41). Analysis of a gag gene alignment, subregions of envelope including additional sequences, and a method that relaxed the assumption of a strict molecular clock also supported these results.

Expanding multiple antibiotic resistance among clinical strains of Vibrio cholerae isolated from 1992-7 in Calcutta, India

Antimicrobial susceptibilities of Vibrio cholerae strains isolated from cholera patients admitted to the Infectious Diseases Hospital, Calcutta, India for 6 years were analysed to determine the changing trends; 840 V. cholerae strains isolated in 1992-1997 were included in this study. Among V. cholerae serogoup O1 and O139, ampicillin resistance increased from 1992 (35 and 70%, respectively) to 1997 (both serogroups 100%). Resistance to furazolidone and streptomycin was constantly high among V. cholerae O1 strains with gradual increase in resistance to other drugs such as ciprofloxacin, co-trimoxazole, neomycin and nalidixic acid. V. cholerae O139 strains exhibited susceptibilities to furazolidone and streptomycin comparable with those of O1 strains. However, after initial increase in resistance to chloramphenicol and co-trimoxazole, all the V. cholerae O139 strains became susceptible to these two drugs from 1995 onwards. Both V. cholerae O1 and O139 remained largely susceptible to gentamicin and tetracycline. V. cholerae non-O1, non-O139 strains, in contrast, exhibited high levels of resistance to virtually every class of antimicrobial agents tested in this study especially from 1995. Kruskal-Wallis one-way analysis showed that V. cholerae O1 Ogawa serogroup exhibited significant yearly increase in resistance to nine antibiotics followed by non-O1 non-O139 and O139 strains to six antibiotics and two antibiotics respectively. Interesting observation encountered in this study was the dissipation of some of the resistant patterns commonly found among V. cholerae non-O1 non-O139 or O1 serogroups to the O139 serogroup and vice versa during the succeeding years.

Vibrio cholerae O139 in Calcutta, 1992-1998: incidence, antibiograms, and genotypes

We report results of surveillance for cholera caused by Vibrio cholerae O139 from September 1992, when it was first identified, to December 1998. V. cholerae O139 dominated as the causative agent of cholera in Calcutta during 1992-93 and 1996- 97, while the O1 strains dominated during the rest of the period. Dramatic shifts in patterns of resistance to cotrimoxazole, neomycin, and streptomycin were observed. Molecular epidemiologic studies showed clonal diversity among the O139 strains and continuous emergence of new epidemic clones, reflected by changes in the structure, organization, and location of the CTX prophages in the V. cholerae O139

Fibrin sealant for treatment of cerebrospinal fluid leaks

OBJECTIVE

Persistent cerebrospinal fluid leaks in the human population are rarely found in otherwise healthy individuals, but occur in patients with comorbid illnesses. These leaks are frequently resistant to dural suturing or closure of the defect site with connective tissue, cartilage, or plastic materials. In this study, fibrin sealant (ViGuard Fibrin Sealant was used to adhere muscle grafts to surgically created dural defects to close cerebrospinal fluid leaks in chinchillas. Histologic evaluation of the defect sites were conducted to assess healing and tissue response in the test and control groups.

METHOD

In 20 chinchillas, after a skin incision, a 6 mm X 6 mm window was created in the right superior bulla exposing the underlying bony tegmen. Using a microcutting burr, a 3 mm X 3 mm area of tegmen was drilled out and the exposed dura was resected to create a large cerebrospinal fluid (CSF) leak. In the control group (n = 10), a small muscle graft from the surrounding tissue was placed into the defect site. In the test group (n = 10), the muscle graft was glued into the defect with ViGuard Fibrin Sealant. Bulla and skin were then closed. All animals were killed at 3 weeks into the experiment, and tissue was harvested for histologic examination.

SETTING

The Department of Otolaryngology, Head and Neck Surgery Research Laboratory. University of Illinois, Chicago.

RESULTS

Three weeks after surgery in the test group the tegmen defects were found to be closed by bone or connective tissue or both. Meninges had regrown, and the underlying brain appeared histologically normal. There was no evidence of CSF leak, toxicity, infection or other deleterious tissue reactions. In the control group, again the meningeal and bony tegmen defects were seen to be closed by connective tissue or bone or both. Brain tissues appeared histologically normal. There was no evidence of CSF leak, toxicity, or other deleterious tissue reactions. One animal of the test group died of unknown causes. On autopsy, no signs of meningitis or encephalitis could be detected and the cause of death was unapparent.

CONCLUSION

Fibrin Sealant, made from pooled donor blood and treated with viral elimination procedures, was found in combination with muscle grafts to securely close induced CSF leaks in the chinchilla model. Inflammation, infection, or toxic reactions were not observed. We believe that ViGuard Fibrin Sealant has stronger bonding power compared with available autologous fibrin tissue adhesives.

Evaluation of pooled fibrin sealant for ear surgery

HYPOTHESIS

This study investigated the bonding strength and tissue toxicity of a commercially prepared dual-virally-inactivated pooled-blood fibrin tissue adhesive (ViGuard-FS; Melville Biologics, Inc., NY, U.S.A.) and compared it with an autologous fibrin tissue adhesive made by the precipitation of fibrinogen using ethanol and freezing (AFTA-E).

METHODS

The bonding strength of FS was optimized by varying the concentrations of fibrinogen and human or bovine thrombin using three different surface media: inorganic (silastic), animal skin, and human dura mater. Furthermore, tissue reactions and duration of fibrin clots were studied by injecting FS into the auricles of rats.

RESULTS

This study showed that optimized FS with human thrombin was superior in bonding strength to AFTA-E on all three surface media, and that FS does not produce any toxic tissue responses when injected into rat auricles. Minimal traces of the adhesive clot could be observed in a few auricles at 35 days after application.

CONCLUSIONS

Because it is made from pooled-donor blood that has been treated with virus elimination procedures, FS is superior to autologous fibrin tissue adhesive in which fibrinogen is precipitated by the ethanol/freezing method. FS has not shown any undesirable tissue reactions when injected into live rat auricles. We believe that these results provide a rationale for further clinical development of ViGuard-FS as a tissue adhesive for otologic surgery.