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Li J, Tang L, Zhang Y, Gao M, Wang S, Wang X. Hydrodynamic cultivation of aeration-free oxygenic photogranules is favored by sufficient amounts of organic carbon. Bioresour Technol 2024; 401:130736. [PMID: 38670289 DOI: 10.1016/j.biortech.2024.130736] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Revised: 04/09/2024] [Accepted: 04/23/2024] [Indexed: 04/28/2024]
Abstract
Oxygenic photogranules (OPGs) have great potential for the aeration-free treatment of various wastewater, however, the effects of wastewater carbon composition on OPGs remain unknown. This study investigated the hydrodynamic photogranulation in three types of wastewater with the same total carbon concentration but different inorganic/organic carbon compositions, each operated at two replicated reactors. Results showed that photogranulation failed in reactors fed with only inorganic carbon. In reactors with equal inorganic and organic carbon, loose-structured OPGs formed but then disintegrated. Comparatively, reactors treating organic carbon-based wastewater obtained regular and dense OPGs with better settleability, lower effluent turbidity, excellent structural stability, and higher carbon assimilation rate. Sufficient amounts of organic carbon were crucial for the formation and stability of OPGs as they promoted the secretion of extracellular polymeric substances (EPS) and the growth of filamentous cyanobacteria. This study provides a basis for the startup of OPGs process and facilitates its large-scale application.
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Affiliation(s)
- Junrong Li
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, Shandong Key Laboratory of Environmental Processes and Health, School of Environmental Science and Engineering, Shandong University, Qingdao 266237, China
| | - Liaofan Tang
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, Shandong Key Laboratory of Environmental Processes and Health, School of Environmental Science and Engineering, Shandong University, Qingdao 266237, China
| | - Yuqing Zhang
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, Shandong Key Laboratory of Environmental Processes and Health, School of Environmental Science and Engineering, Shandong University, Qingdao 266237, China
| | - Mingming Gao
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, Shandong Key Laboratory of Environmental Processes and Health, School of Environmental Science and Engineering, Shandong University, Qingdao 266237, China
| | - Shuguang Wang
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, Shandong Key Laboratory of Environmental Processes and Health, School of Environmental Science and Engineering, Shandong University, Qingdao 266237, China; Weihai Research Institute of Industrial Technology of Shandong University, Weihai 264209, China
| | - Xinhua Wang
- Shandong Key Laboratory of Water Pollution Control and Resource Reuse, Shandong Key Laboratory of Environmental Processes and Health, School of Environmental Science and Engineering, Shandong University, Qingdao 266237, China.
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2
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Zhi M, Zhao Y, Zeng X, Maddela NR, Xiao Y, Chen Y, Prasad R, Zhou Z. Filamentous cyanobacteria and hydrophobic protein in extracellular polymeric substances facilitate algae-bacteria aggregation during partial nitrification. Int J Biol Macromol 2023; 251:126379. [PMID: 37595699 DOI: 10.1016/j.ijbiomac.2023.126379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 07/08/2023] [Accepted: 08/15/2023] [Indexed: 08/20/2023]
Abstract
In algae-bacteria symbiotic wastewater treatment, the excellent settling performance of algae-bacteria aggregates is critical for biomass separation and recovery. Here, the composition of extracellular polymeric substances (EPS), microbial profiles, and functional genes of algae-bacteria aggregates were investigated at different solid retention times (SRTs) (10, 20, and 40 d) during partial nitrification in photo sequencing bioreactors (PSBRs). Results showed that SRTs greatly influenced the nitrogen transformation and the formation and morphological structure of algae-bacteria aggregates. The highest nitrite accumulation, the largest particle size (~1.54 mm) and the best settling performance were observed for the algae-bacteria aggregates in the PSBR with an SRT of 10 d, where the abundant occurrence of filamentous cyanobacteria with the highest ratio of chlorophyll a/b and the lowest EPS amount with the highest protein-to-polysaccharide ratio were observed. In particular, the EPS at 10 d of SRT contained a higher amount of protein-related hydrophobic groups and a lower ratio of α-helix/(β-sheet + random coil), indicating a looser protein structure, which might facilitate the formation and stabilization of algae-bacteria aggregates. Moreover, algal-bacterial aggregation greatly depended on the composition and evolution of filamentous cyanobacteria (unclassified _o__Oscillatoriales and Phormidium accounted for 56.29 % of the identified algae at SRT 10 d). The metagenomic analysis further revealed that functional genes related to amino acid metabolism (e.g., genes of phenylalanine, tyrosine, and tryptophan biosynthesis) were expressed at high levels within 10 d of SRT. Overall, this study demonstrates the influence of EPS structures and filamentous cyanobacteria on algae-bacteria aggregation and reveals the biological mechanisms driving photogranule structure and function.
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Affiliation(s)
- Mei Zhi
- College of Resources and Environment, Southwest University, Chongqing 400715, China; Chongqing Engineering Research Center of Rural Cleaner Production, Chongqing 400715, China
| | - Yiying Zhao
- College of Resources and Environment, Southwest University, Chongqing 400715, China
| | - Xinyu Zeng
- College of Resources and Environment, Southwest University, Chongqing 400715, China
| | - Naga Raju Maddela
- Departamento de Ciencias Biológicas, Facultad de Ciencias de la Salud, Universidad Técnica de Manabí, Portoviejo 130105, Ecuador
| | - Yeyuan Xiao
- Department of Civil and Environmental Engineering, Shantou University, Shantou 515063, China
| | - Yucheng Chen
- College of Resources and Environment, Southwest University, Chongqing 400715, China; Chongqing Engineering Research Center of Rural Cleaner Production, Chongqing 400715, China
| | - Ram Prasad
- Department of Botany, Mahatma Gandhi Central University, Motihari, Bihar 845401, India.
| | - Zhongbo Zhou
- College of Resources and Environment, Southwest University, Chongqing 400715, China; Chongqing Engineering Research Center of Rural Cleaner Production, Chongqing 400715, China.
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Yang C, Shen X, Shi X, Cui Z, Nan J, Lu H, Li J, Huang Q. Impact of submerged macrophytes on growth and 2-MIB release risk of Pseudanabaena sp.: From field monitoringa to cultural experiments. J Hazard Mater 2023; 442:130052. [PMID: 36182878 DOI: 10.1016/j.jhazmat.2022.130052] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Revised: 09/20/2022] [Accepted: 09/21/2022] [Indexed: 06/16/2023]
Abstract
The off-flavor compound 2-methylisoborneol (2-MIB) is generally associated with the proliferation and metabolism of filamentous cyanobacteria in shallow freshwater ecosystems. Here field monitoring in East Taihu Lake from July to October 2021, along with cultural experiments, was conducted to determine the impact of submerged macrophytes on the growth and 2-MIB production of filamentous cyanobacteria. Pseudanabaena sp. was identified as the 2-MIB producer with the highest detection rate (100%) and correlation coefficient (R=0.68, p < 0.001). The 2-MIB concentration and algal growth in the macrophyte-dominated zones were markedly decreased compared with those in the phytoplankton-dominated zone. Five submerged macrophytes classified into flat-leaf type (Vallisneria natans and Potamogeton crispus) and thin-leaf type (Hydrilla verticillata, Ceratophyllum demersum, and Myriophyllum spicatum) exhibited strong inhibition effects against Pseudanabaena sp.: Overall inhibition efficiencies (IEs) of 92.7% ± 6.8% and 92.7% ± 8.4% for cell growth and 2-MIB production were achieved, respectively. Moreover, the thin-leaf macrophytes exhibited significant higher IEs for cell growth (94.0% vs. 84.7%) and 2-MIB production (99.4% vs. 82.6%) than the flat-leaf macrophytes and can be selected as pioneer species in controlling odor problems. Nutrient uptake, increasing water clarity, shading effects, and allelopathic effects of the submerged macrophytes were found to be the dominant inhibition mechanisms.
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Affiliation(s)
- Changtao Yang
- College of Environmental Science and Engineering, Tongji University, Shanghai 200092, China; Research Center for Aquatic Ecology of East Taihu Lake, Suzhou 215200, China
| | - Xiaobing Shen
- Research Center for Aquatic Ecology of East Taihu Lake, Suzhou 215200, China; Bureau of Water Resource of Wujiang District, Suzhou 215228, China
| | - Xinyi Shi
- College of Environmental Science and Engineering, Tongji University, Shanghai 200092, China; Research Center for Aquatic Ecology of East Taihu Lake, Suzhou 215200, China
| | - Zhijie Cui
- College of Environmental Science and Engineering, Tongji University, Shanghai 200092, China
| | - Jing Nan
- College of Environmental Science and Engineering, Tongji University, Shanghai 200092, China
| | - Haiming Lu
- Nanjing Hydraulic Research Institute, Nanjing 210029, China
| | - Jianhua Li
- College of Environmental Science and Engineering, Tongji University, Shanghai 200092, China
| | - Qinghui Huang
- College of Environmental Science and Engineering, Tongji University, Shanghai 200092, China; Key Laboratory of Yangtze River Water Environment, Ministry of Education of China, Tongji University, Shanghai 200092, China.
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Papadopoulos KP, Economou CN, Stefanidou N, Moustaka-Gouni M, Genitsaris S, Aggelis G, Tekerlekopoulou AG, Vayenas DV. A semi-continuous algal-bacterial wastewater treatment process coupled with bioethanol production. J Environ Manage 2023; 326:116717. [PMID: 36399810 DOI: 10.1016/j.jenvman.2022.116717] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Revised: 11/01/2022] [Accepted: 11/03/2022] [Indexed: 06/16/2023]
Abstract
Harnessing the biomass energy potential through biofuel production offers new outlets for a circular economy. In this study an integrated system which combine brewery wastewater treatment using algal-bacterial aggregates instead of activated sludge was developed. The use of algal-bacterial aggregates can eliminate the aeration requirements and significantly reduce the high biomass harvesting costs associated with algal monocultures. A sequencing batch reactor (SBR) setup operating with and without biomass recirculation was used to investigate pollutant removal rates, aggregation capacity and microbial community characteristics under a range of hydraulic retention times (HRTs) and solid retention times (SRTs). It was observed that biomass recirculation strategy significantly enhanced aggregation and pollutant removal (i.e., 78.7%, 94.2% and 75.2% for d-COD, TKN, and PO43--P, respectively). The microbial community established was highly diverse consisting of 161 Bacterial Operational Taxonomic Units (B-OTUs) and 16 unicellular Eukaryotic OTUs (E-OTUs). Escalation the optimal conditions (i.e., HRT = 4 d, SRT = 10 d) at pilot-scale resulted in nutrient starvation leading to 38-44% w/w carbohydrate accumulation. The harvested biomass was converted to bioethanol after acid hydrolysis followed by fermentation with Saccharomyces cerevisiae achieving a bioethanol production yield of 0.076 g bioethanol/g biomass. These data suggest that bioethanol production coupled with high-performance wastewater treatment using algal-bacterial aggregates is feasible, albeit less productive concerning bioethanol yields than systems exclusively designed for third and fourth-generation biofuel production.
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Affiliation(s)
| | - Christina N Economou
- Department of Chemical Engineering, University of Patras, Rio, GR-26504 Patras, Greece.
| | - Natassa Stefanidou
- School of Biology - Aristotle University of Thessaloniki, Thessaloniki, GR-54124, Greece
| | - Maria Moustaka-Gouni
- School of Biology - Aristotle University of Thessaloniki, Thessaloniki, GR-54124, Greece
| | - Savvas Genitsaris
- Section of Ecology and Taxonomy, School of Biology, National and Kapodistrian University of Athens, Zografou Campus, GR-15784 Athens, Greece
| | - George Aggelis
- Department of Biology, University of Patras, Rio, GR-26504 Patras, Greece
| | | | - Dimitris V Vayenas
- Department of Chemical Engineering, University of Patras, Rio, GR-26504 Patras, Greece; Institute of Chemical Engineering and High Temperature Chemical Processes (FORTH/ ICE-HT), Stadiou Str., Platani, GR-26504 Patras, Greece
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5
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Karlson B, Arneborg L, Johansson J, Linders J, Liu Y, Olofsson M. A suggested climate service for cyanobacteria blooms in the Baltic Sea - Comparing three monitoring methods. Harmful Algae 2022; 118:102291. [PMID: 36195413 PMCID: PMC9559175 DOI: 10.1016/j.hal.2022.102291] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Revised: 07/07/2022] [Accepted: 07/11/2022] [Indexed: 05/06/2023]
Abstract
Dense blooms of filamentous cyanobacteria are recurrent phenomena in the Baltic Sea, with occasional negative effects on the surrounding ecosystem, as well as on tourism, human health, aquaculture, and fisheries. Establishing a climate service is therefore suggested; including multi-method observations of cyanobacteria biomass, biodiversity, and biogeography, in correspondence to biotic and abiotic factors. Three different approaches were compared for determination of spatial and temporal variability and trends of the blooms; 1) microscopy-based long-term data, 2) satellite remote sensing, and 3) phycocyanin fluorescence mounted on a merchant vessel. Firstly, microscopy-based data on cyanobacteria biomass from the period 2000-2020 showed that the toxin producing genus Nodularia and non-toxic Aphanizomenon both had summer means of 15 µg C L-1, while Dolichospermum was less dominant with a mean of 8 µg C L-1. Some years also the Kattegat was affected by cyanobacteria blooms, likely transported here by ocean currents. Secondly, the satellite remote sensing time series for the period 2002-2020 indicated that near surface blooms were most frequent in the Northern Baltic Proper and that near surface blooms have increased in the Bothnian Sea, starting later in the season than in the Baltic Proper. The largest extents (i.e., total area covered) were observed in 2005, 2008, and 2018. Thirdly, phycocyanin fluorescence from a flow through sensor mounted on a merchant vessel was used as a proxy for cyanobacteria biomass and correlated to cyanobacteria biomass estimated by microscopy. However, the satellite remote sensing data on surface accumulations showed little resemblance to the data on cyanobacteria biomass based on water sampling and microscopy, interpreted as an effect of methods. Sensors on satellites mainly detect surface accumulations of cyanobacteria while the microscopy data was based on samples 0-10 m, thereby comprising a larger community. Data from satellite remote sensing of cyanobacteria was correlated to the phycocyanin fluorescence indicating that similar bio-optical properties are observed. Finally, results from a downscaled ocean climate model (NEMONordic) were used to produce future scenarios for temperature and salinity, which directly affects cyanobacteria blooms in the Baltic Sea, supposedly by increasing in abundance and change in species composition. Short-term forecasts can be used together with observations for early warning of cyanobacteria blooms, and we suggest an internationally coordinated cyanobacteria observation and warning system for the Baltic Sea area.
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Affiliation(s)
- Bengt Karlson
- Research and Development, Oceanography, Swedish Meteorological and Hydrological Institute, Västra Frölunda, Sweden.
| | - Lars Arneborg
- Research and Development, Oceanography, Swedish Meteorological and Hydrological Institute, Västra Frölunda, Sweden
| | - Johannes Johansson
- Oceanographic Services, Swedish Meteorological and Hydrological Institute, Västra Frölunda, Sweden
| | - Johanna Linders
- Oceanographic Services, Swedish Meteorological and Hydrological Institute, Västra Frölunda, Sweden
| | - Ye Liu
- Research and Development, Oceanography, Swedish Meteorological and Hydrological Institute, Västra Frölunda, Sweden
| | - Malin Olofsson
- Research and Development, Oceanography, Swedish Meteorological and Hydrological Institute, Västra Frölunda, Sweden; Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, Uppsala, Sweden
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6
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Su M, Suruzzaman MD, Zhu Y, Lu J, Yu J, Zhang Y, Yang M. Ecological niche and in-situ control of MIB producers in source water. J Environ Sci (China) 2021; 110:119-128. [PMID: 34593182 DOI: 10.1016/j.jes.2021.03.026] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2021] [Accepted: 03/10/2021] [Indexed: 06/13/2023]
Abstract
Odor problems in source water caused by 2-methylisoborneol (MIB) have been a common issue in China recently, posing a high risk to drinking water safety. The earthy-musty odorant MIB has an extremely low odor threshold (4-16 ng/L) and is hard to remove via conventional processes in drinking water plants (DWP), and therefore could easily provoke complaints from consumers. This compound is produced by a group of filamentous cyanobacteria, mainly belonging to Oscillatoriales. Different from the well-studied surface-blooming Microcystis, filamentous cyanobacteria have specific niche characteristics that allow them to stay at a subsurface or deep layer in the water column. The underwater bloom of these MIB producers is therefore passively determined by the underwater light availability, which is governed by the cell density of surface scum. This suggests that drinking water reservoirs with relatively low nutrient contents are not able to support surface blooms, but are a fairly good fit to the specialized ecological niche of filamentous cyanobacteria; this could explain the widespread odor problems in source water. At present, MIB is mainly treated in DWP using advanced treatment processes and/or activated carbon, but these post-treatment methods have high cost, and not able to deal with water containing high MIB concentrations. Thus, in situ control of MIB producers in source water is an effective complement and is desirable. Lowering the underwater light availability is a possible measure to control MIB producers according to their niche characteristics, which can be obtained by either changing the water level or other measures.
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Affiliation(s)
- Ming Su
- Key Laboratory of Drinking Water Science and Technology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - M D Suruzzaman
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yiping Zhu
- Shanghai Chengtou Raw Water Co. Ltd., Shanghai 200125, China
| | - Jinping Lu
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jianwei Yu
- Key Laboratory of Drinking Water Science and Technology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yu Zhang
- Key Laboratory of Drinking Water Science and Technology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Min Yang
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
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7
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Xu H, Pang Y, Li Y, Zhang S, Pei H. Using sodium percarbonate to suppress vertically distributed filamentous cyanobacteria while maintaining the stability of microeukaryotic communities in drinking water reservoirs. Water Res 2021; 197:117111. [PMID: 33857892 DOI: 10.1016/j.watres.2021.117111] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2020] [Revised: 11/20/2020] [Accepted: 03/31/2021] [Indexed: 06/12/2023]
Abstract
The increasing frequency and intensity of blooms of toxin- and taste & odour-producing filamentous cyanobacteria in water sources is a growing global issue. Compared to the common spherical Microcystis genus, the removal of filamentous cyanobacteria is more difficult in drinking water treatment plants; hence, abatement and control of the occurrence and proliferation of harmful filamentous cyanobacteria within drinking water sources is important for water supply. In this study, the solid sodium percarbonate (SPC), Na2CO3·1.5H2O2, was used as an algaecide to eliminate the cyanobacteria distributed throughout the water column in the surface and bottom layer of a reservoir serving as a drinking water source. Results showed that although the oxidation capacity of SPC was higher in the surface water due to the higher light intensity than in the bottom water, 3.0 mg/L SPC can still suppress the harmful cyanobacteria in the bottom water after 36 h because the carbonate ion generated by SPC decomposition can act as an activator of H2O2 to generate many reactive oxygen species - including superoxide radicals, carbonate radical anions, and hydroxyl radicals - even in the light-limited environment. The obtained inactivation rates for the main cyanobacteria in this reservoir followed the order: Pseudanabaena limnetica > Raphidiopsis curvata > Cylindrospermopsis raciborskii. 3.0 mg/L SPC has a slight impact on microeukaryotic communities according to the 18S rRNA gene sequencing, while 6.0 mg/L SPC changed the composition of eukaryotic phytoplankton and zooplankton clearly. Eukaryotic co-occurrence networks showed that although the network of eukaryotic plankton in treated surface water was more compact and clustered, stability of microeukaryotes in the treated surface water was lower than for the treated bottom water, owing to the higher oxidation capacity of SPC in the surface water. The results above not only have important implications for full-scale control of harmful cyanobacteria in drinking water sources, especially filamentous cyanobacteria with vertical distributions, but also help to ensure the health and stability of the whole aquatic ecosystem.
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Affiliation(s)
- Hangzhou Xu
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, China; School of Environmental Science and Engineering, Shandong University, Qingdao, 266237, China; Shandong Provincial Engineering Center on Environmental Science and Technology, Jinan, 250061, China
| | - Yiming Pang
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, China; School of Environmental Science and Engineering, Shandong University, Qingdao, 266237, China
| | - Yizhen Li
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, China; School of Environmental Science and Engineering, Shandong University, Qingdao, 266237, China
| | - Shasha Zhang
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, China; School of Environmental Science and Engineering, Shandong University, Qingdao, 266237, China
| | - Haiyan Pei
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, China; School of Environmental Science and Engineering, Shandong University, Qingdao, 266237, China; Shandong Provincial Engineering Center on Environmental Science and Technology, Jinan, 250061, China.
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Olofsson M, Klawonn I, Karlson B. Nitrogen fixation estimates for the Baltic Sea indicate high rates for the previously overlooked Bothnian Sea. Ambio 2021; 50:203-214. [PMID: 32314265 PMCID: PMC7708615 DOI: 10.1007/s13280-020-01331-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2019] [Revised: 11/22/2019] [Accepted: 03/20/2020] [Indexed: 05/05/2023]
Abstract
Dense blooms of diazotrophic filamentous cyanobacteria are formed every summer in the Baltic Sea. We estimated their contribution to nitrogen fixation by combining two decades of cyanobacterial biovolume monitoring data with recently measured genera-specific nitrogen fixation rates. In the Bothnian Sea, estimated nitrogen fixation rates were 80 kt N year-1, which has doubled during recent decades and now exceeds external loading from rivers and atmospheric deposition of 69 kt year-1. The estimated contribution to the Baltic Proper was 399 kt N year-1, which agrees well with previous estimates using other approaches and is greater than the external input of 374 kt N year-1. Our approach can potentially be applied to continuously estimate nitrogen loads via nitrogen fixation. Those estimates are crucial for ecosystem adaptive management since internal nitrogen loading may counteract the positive effects of decreased external nutrient loading.
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Affiliation(s)
- Malin Olofsson
- Research and Development, Oceanography, Swedish Meteorological and Hydrological Institute, Sven Källfelts Gata 15, 426 71 Västra Frölunda, Gothenburg, Sweden
- Present Address: Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, Uppsala, Sweden
| | - Isabell Klawonn
- Department of Experimental Limnology, IGB-Leibniz-Institute of Freshwater Ecology and Inland Fisheries, Alte Fischerhütte 2, OT Neuglobsow, Stechlin, 16775 Berlin, Germany
| | - Bengt Karlson
- Research and Development, Oceanography, Swedish Meteorological and Hydrological Institute, Sven Källfelts Gata 15, 426 71 Västra Frölunda, Gothenburg, Sweden
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Clemente A, Wilson A, Oliveira S, Menezes I, Gois A, Capelo-Neto J. The role of hydraulic conditions of coagulation and flocculation on the damage of cyanobacteria. Sci Total Environ 2020; 740:139737. [PMID: 32927561 DOI: 10.1016/j.scitotenv.2020.139737] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Revised: 05/04/2020] [Accepted: 05/25/2020] [Indexed: 06/11/2023]
Abstract
Limited information exists on the damage of harmful cyanobacteria cells, such as Raphidiopsis raciborskii and Dolichospermum circinale, caused by the hydraulic conditions at water treatment plants especially when it comes to the mechanical stresses imposed by coagulation and flocculation. To close this gap, this study evaluated the impacts of rapid and slow-mixing on R. raciborskii and D. circinale cells and trichomes. The hydraulic conditions used during the experiment were selected based on AWWA, which are widely applied in the absence of specific treatability tests. Cellular integrity was evaluated by the Erythrosine B staining method and logistic regression was used to study the association between organism integrity and hydraulic conditions (i.e., velocity gradient and mixing time). Wilcoxon rank-sum test was used to verify if there was a significant reduction of the trichome length and cell integrity. Rapid-mixing (velocity gradient of 750 s-1 for 60 s) reduced the odds of finding intact D. circinale to <50%, whereas the odds of finding intact R. raciborskii cells did not significantly decrease. The odds of finding intact cells of R. raciborskii were 124 times greater than D. circinale. Rapid-mixing also reduced the length of D. circinale trichomes by approximately 50% but did not significantly decrease R. raciborskii trichomes. Slow-mixing did not significantly affect organisms or trichomes of either species. The results indicate that AWWA recommendations for coagulation may cause damage to D. circinale but not to R. raciborskii, suggesting that the operation of water treatment plants could be adjusted according to the dominant cyanobacterium present in the reservoir to avoid cell rupture and metabolite release.
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Affiliation(s)
- Allan Clemente
- Federal University of Ceara, Department of Hydraulic and Environmental Engineering, Block 713, Campus Pici, Fortaleza, Ceará, Brazil.
| | - Alan Wilson
- Auburn University, School of Fisheries, Aquaculture, and Aquatic Sciences, Auburn, AL 36849, USA.
| | - Samylla Oliveira
- Federal University of Ceara, Department of Hydraulic and Environmental Engineering, Block 713, Campus Pici, Fortaleza, Ceará, Brazil
| | - Indira Menezes
- Federal University of Ceara, Department of Hydraulic and Environmental Engineering, Block 713, Campus Pici, Fortaleza, Ceará, Brazil
| | - Amanda Gois
- Federal University of Ceara, Department of Hydraulic and Environmental Engineering, Block 713, Campus Pici, Fortaleza, Ceará, Brazil
| | - Jose Capelo-Neto
- Federal University of Ceara, Department of Hydraulic and Environmental Engineering, Block 713, Campus Pici, Fortaleza, Ceará, Brazil.
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Yang Y, Zheng X, Tang Q, Gu J, Lei L, Han BP. Species diversity and seasonal dynamics of filamentous cyanobacteria in urban reservoirs for drinking water supply in tropical China. Ecotoxicology 2020; 29:780-789. [PMID: 32185603 DOI: 10.1007/s10646-020-02189-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 02/28/2020] [Indexed: 06/10/2023]
Abstract
Filamentous cyanobacteria have been observed to become the dominant species in reservoirs, especially in small reservoirs for drinking water supply in southern China. The occurrences of filamentous cyanobacteria blooms in such reservoirs add additional costs for water plants by decreasing the filtration efficiency and the potential of toxin production. To serve the purpose of drinking water supply, the effective risk assessment requires the dynamic pattern of filamentous cyanobacteria. This study seasonally collected samples from 25 reservoirs in Dongguan, one of the most important 'world factories' in China in July, December and March, and investigated the temporal dynamics of phytoplankton, particularly cyanobacteria community. Our investigation showed that filamentous cyanobacteria, Planktothrix sp, Limnothrix sp. and Cylindrospermopsis raciborskii dominated in these reservoirs and climate-related water temperature was the primary factor for the seasonal shift of filamentous cyanobacteria. High abundance of filamentous cyanobacteria occurred in the high water level period with increasing temperature but less relevant with nutrient conditions. Our study observed the seasonal dynamics of filamentous cyanobacteria in tropical urban reservoirs and highlighted the association between temperature and filamentous cyanobacteria. our data and analysis provided an evidence that increased temperature could increase the likelihood of frequency and intensity of filamentous cyanobacteria blooms. In the scenario of global warming, more frequent monitoring of filamentous cyanobacteria and the potential to produce toxin should be considered for water quality and reservoir management.
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Affiliation(s)
- Yang Yang
- Department of Ecology, Jinan University, Guangzhou, 510632, China
- School of Life Sciences, Guizhou Normal University, Guiyang, 550001, China
| | - Xunhao Zheng
- Department of Ecology, Jinan University, Guangzhou, 510632, China
| | - Quehui Tang
- Department of Ecology, Jinan University, Guangzhou, 510632, China
| | - Jiguang Gu
- Department of Ecology, Jinan University, Guangzhou, 510632, China
| | - Lamei Lei
- Department of Ecology, Jinan University, Guangzhou, 510632, China
| | - Bo-Ping Han
- Department of Ecology, Jinan University, Guangzhou, 510632, China.
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11
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Iasimone F, Seira J, Desmond-Le Quéméner E, Panico A, De Felice V, Pirozzi F, Steyer JP. Bioflocculation and settling studies of native wastewater filamentous cyanobacteria using different cultivation systems for a low-cost and easy to control harvesting process. J Environ Manage 2020; 256:109957. [PMID: 31822456 DOI: 10.1016/j.jenvman.2019.109957] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2019] [Revised: 11/07/2019] [Accepted: 12/03/2019] [Indexed: 06/10/2023]
Abstract
Bioflocculation phenomena for filamentous cyanobacteria were studied and analysed in two different cultivation systems (i.e. based on air-bubbling and on shaking) and for different initial biomass concentrations. Floc formation and biomass settling were monitored during batch cultivation tests according to an innovative protocol. Results showed that the two cultivation systems enhanced two different flocculation behaviours: air bubbling led to the formation of small and dense flocs, while the shaking table resulted in larger (14 mm2 vs 4 mm2) but mechanically weaker flocs. Floc analysis evidenced that the different mixing systems also affected the speciation of biomass. A mathematical model was developed to simulate and predict the settling performance during the bioflocculation process of filamentous cyanobacteria. Natural settling was examined at different phases of biomass growth. Optimal conditions were obtained at the end of the exponential growth phase, when 70% of the total cultivated biomass could be recovered.
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Affiliation(s)
- Floriana Iasimone
- Università degli Studi del Molise, Dipartimento di Bioscienze e Territorio, C.da Fonte Lappone, 86090, Pesche (IS), Italy.
| | - Jordan Seira
- LBE, Univ Montpellier, INRA, 102 Avenue des Étangs, 11100, Narbonne, France
| | | | - Antonio Panico
- Università Telematica Pegaso, Piazza Trieste e Trento 48, 80132, Napoli, Italy
| | - Vincenzo De Felice
- Università degli Studi del Molise, Dipartimento di Bioscienze e Territorio, C.da Fonte Lappone, 86090, Pesche (IS), Italy
| | - Francesco Pirozzi
- Università degli Studi di Napoli, Dipartimento di Ingegneria Civile Edile Ambientale, Via Claudio 21, 80125, Napoli, Italy
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12
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Lu Y, Zhuo C, Li Y, Li H, Yang M, Xu D, He H. Evaluation of filamentous heterocystous cyanobacteria for integrated pig-farm biogas slurry treatment and bioenergy production. Bioresour Technol 2020; 297:122418. [PMID: 31761632 DOI: 10.1016/j.biortech.2019.122418] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/2019] [Revised: 11/10/2019] [Accepted: 11/11/2019] [Indexed: 06/10/2023]
Abstract
The study evaluates 36 filamentous heterocystous cyanobacteria for the treatment of biogas slurry from pig farm and the accumulation of biomass for bioenergy production. The results showed that only the strains B, J, and L were able to adapt to a 10% biogas slurry. The removal rates of ammonia nitrogen, total nitrogen, and total phosphorus for strains J and L were 92.46%-97.97%, 73.79%-79.90%, and 97.14%-98.46%, respectively, higher than that of strain B. Strain J had the highest biomass productivity and lipid productivity. Based on the biodiesel prediction results, it was concluded that strains J and L are more suitable for biodiesel production. The estimation of theoretical methane potential suggests that the algal biomass of strain J also have the desirable possibility of biogas generation. In summary, algal strain J (Nostoc sp.) offers great potential for biogas slurry treatment and for the production of bioenergy.
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Affiliation(s)
- Yuzhen Lu
- Key Laboratory of Agro-Environment in the Tropics, Ministry of Agriculture, Guangdong Provincial Key Laboratory of Eco-Circular Agriculture, South China Agricultural University, Guangzhou 510642, China
| | - Chen Zhuo
- Key Laboratory of Agro-Environment in the Tropics, Ministry of Agriculture, Guangdong Provincial Key Laboratory of Eco-Circular Agriculture, South China Agricultural University, Guangzhou 510642, China
| | - Yongjun Li
- Qingyuan Polytechnic, Qingyuan 511510, China
| | - Huashou Li
- Key Laboratory of Agro-Environment in the Tropics, Ministry of Agriculture, Guangdong Provincial Key Laboratory of Eco-Circular Agriculture, South China Agricultural University, Guangzhou 510642, China
| | - Mengying Yang
- Key Laboratory of Agro-Environment in the Tropics, Ministry of Agriculture, Guangdong Provincial Key Laboratory of Eco-Circular Agriculture, South China Agricultural University, Guangzhou 510642, China
| | - Danni Xu
- Key Laboratory of Agro-Environment in the Tropics, Ministry of Agriculture, Guangdong Provincial Key Laboratory of Eco-Circular Agriculture, South China Agricultural University, Guangzhou 510642, China
| | - Hongzhi He
- Key Laboratory of Agro-Environment in the Tropics, Ministry of Agriculture, Guangdong Provincial Key Laboratory of Eco-Circular Agriculture, South China Agricultural University, Guangzhou 510642, China.
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13
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Olofsson M, Suikkanen S, Kobos J, Wasmund N, Karlson B. Basin-specific changes in filamentous cyanobacteria community composition across four decades in the Baltic Sea. Harmful Algae 2020; 91:101685. [PMID: 32057344 DOI: 10.1016/j.hal.2019.101685] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2019] [Revised: 09/23/2019] [Accepted: 09/29/2019] [Indexed: 06/10/2023]
Abstract
Almost every summer, dense blooms of filamentous cyanobacteria are formed in the Baltic Sea. These blooms may cause problems for tourism and ecosystem services, where surface accumulations and beach fouling are commonly occurring. Future changes in environmental drivers, including climate change and other anthropogenic disturbances, may further enhance these problems. By compiling monitoring data from countries adjacent to the Baltic Sea, we present spatial and temporal genus-specific distribution of diazotrophic filamentous cyanobacteria (Nostocales) during four decades (1979-2017). While the summer surface salinity decreased with a half up to one unit, the surface temperature in July-August increased with 2-3 °C in most sub-basins of the Baltic Sea, during the time period. The biovolumes of the toxic Nodularia spumigena did not change in any of the sub-basins during the period. On the other hand, the biovolume of the non-toxic Aphanizomenon sp. and the potentially toxic Dolichospermum spp. increased in the northern parts of the Baltic Sea, along with the decreased salinity and elevated temperatures, but Aphanizomenon sp. decreased in the southern parts despite decreased salinity and increased temperatures. These contradictory changes in biovolume of Aphanizomenon sp. between the northern and southern parts of the Baltic Sea may be due to basin-specific effects of the changed environmental conditions, or can be related to local adaptation by sub-populations of the genera. Overall, this comprehensive dataset presents insights to genus-specific bloom dynamics by potentially harmful diazotrophic filamentous cyanobacteria in the Baltic Sea.
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Affiliation(s)
- Malin Olofsson
- Research and Development, Oceanography, Swedish Meteorological and Hydrological Institute, Sven Källfelts Gata 15, 426 71, Västra Frölunda, Sweden.
| | - Sanna Suikkanen
- Marine Research Centre, Finnish Environment Institute, Latokartanonkaari 11, 00790, Helsinki, Finland.
| | - Justyna Kobos
- University of Gdansk, Faculty of Oceanography and Geography, Institute of Oceanography, Division of Marine Biotechnology, al. Marszałka Józefa Piłsudskiego 46, 81-378, Gdynia, Poland.
| | - Norbert Wasmund
- Leibniz Institute for Baltic Sea Research, Warnemünde, Seestrasse 15, D-18119, Rostock, Germany.
| | - Bengt Karlson
- Research and Development, Oceanography, Swedish Meteorological and Hydrological Institute, Sven Källfelts Gata 15, 426 71, Västra Frölunda, Sweden.
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14
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Qian K, Dokulil M, Chen Y. Do the regular annual extreme water level changes affect the seasonal appearance of Anabaena in Poyang Lake? PeerJ 2019; 7:e6608. [PMID: 30997284 PMCID: PMC6463853 DOI: 10.7717/peerj.6608] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2018] [Accepted: 02/02/2019] [Indexed: 11/20/2022] Open
Abstract
Background Poyang Lake is an ecosystem experiencing annual variations in water level of up to 14 m. Water level changes were 8.03 and 11.22 m, respectively, in the years 2013 and 2014. The biomass and heterocyst frequency of Anabaena increased in the summers of recent years. Methods A weekly to bi-weekly monitoring from June to November 2013 and 2014 was set up to explain the variations of Anabaena appearance in different phases of the water level. Results Anabaena was present in the lake throughout the year. The average relative biomass of Anabaena in the present study was over 40%, being most abundant in summer. The average heterocyst frequency was 0.23% in 2013 and 0.76% in 2014. Correlation analysis indicated a positive trend of Anabaena biomass with water temperature and water level and a negative one with total nitrogen (TN), which is the reason for the increase of heterocyst frequency in 2013 and 2014. Heterocyst frequency of Anabaena was positively correlated with water temperature, water level and PO4-P, and negatively with dissolved inorganic nitrogen (DIN/DIP), NO3-N and TN. Moreover, water temperature and DIN/DIP were significantly correlated with water level, indicating that water level changes have a direct effect on Anabaena and heterocyst formation in Poyang Lake. Conclusions The results of this study support the hypothesis that increasing biomass and heterocyst formation of Anabaena can be primarily caused by seasonal changes of the water level in Poyang Lake.
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Affiliation(s)
- Kuimei Qian
- College of Environmental Engineering, Xuzhou University of Technology; Jiangsu Laboratory of Pollution Control and Resources Reuse, Xuzhou, China
| | - Martin Dokulil
- Research Department for Limnology, Mondsee, University of Innsbruck, Monsee, Austria
| | - Yuwei Chen
- Nanchang Institute of Technology, Nanchang, China
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15
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Li H, Alsanea A, Barber M, Goel R. High-throughput DNA sequencing reveals the dominance of pico- and other filamentous cyanobacteria in an urban freshwater Lake. Sci Total Environ 2019; 661:465-480. [PMID: 30677691 DOI: 10.1016/j.scitotenv.2019.01.141] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2018] [Revised: 01/10/2019] [Accepted: 01/12/2019] [Indexed: 06/09/2023]
Abstract
The current study presents findings related to algal blooms in a fresh water lake, which has been experiencing severe cyanobacterial blooms (CyanoHABs). Primarily, picocyanobacteria belonging to the genus Synechococcus and filamentous cyanobacterial group belonging to Aphanizomenon and Dolichospermum dominated top water column during non-bloom and bloom periods respectively. The dominance of Synechococcus in early summer informs that blooming in Utah Lake starts in early summer and then later is taken over by other bloom-forming cyanobacteria, such as species belonging to the genus Aphanizomenon. A strong negative correlation (r = -0.9, p < 0.001) was found between the occurrence of Aphanizomenon and Synechococcus which correlates very well with the fact that the blooms of these two different cyanobacteria never coexisted. The predominance of cyanobacteria in 2017 was attributed more to temperature (r = 0.18, p < 0.001). The Actinobacteria was negatively correlated with primary production and high chlorophyll a concentration. Flavobacterium and Limnohabitans were the main phytoplankton colonizers and predators detected that could secrete extracellular enzymes to degrade algal exudates (such as proteins and polysaccharides). Additionally, cyanotoxins producers Microcystis aeruginosa and Planktothrix accounted for up to 12.43% and 7.04% of total cyanobacteria abundance during blooms. The relative abundance of chloroplast reads was overall lower than the cyanobacteria reads, except for the May 5th sampling in 2017. There was inter-annual variability in the bloom-associated heterotrophic bacterial populations, but these populations were consistent with bloom-associated bacterial populations found in other lakes. Community diversity analysis for both Shannon and Simpson indices indicated lower community diversity during the bloom period. The beta diversity conducted by PCoA and UPGMA trees suggested the significant temporal rather than spatial impacts on shaping the phytoplankton community structures during the summer season.
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Affiliation(s)
- Hanyan Li
- Department of Civil and Environmental Engineering, University of Utah, UT, USA
| | - Anwar Alsanea
- Department of Civil and Environmental Engineering, University of Utah, UT, USA
| | - Michael Barber
- Department of Civil and Environmental Engineering, University of Utah, UT, USA
| | - Ramesh Goel
- Department of Civil and Environmental Engineering, University of Utah, UT, USA.
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16
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Šulčius S, Mazur-Marzec H, Vitonytė I, Kvederavičiūtė K, Kuznecova J, Šimoliūnas E, Holmfeldt K. Insights into cyanophage-mediated dynamics of nodularin and other non-ribosomal peptides in Nodularia spumigena. Harmful Algae 2018; 78:69-74. [PMID: 30196926 DOI: 10.1016/j.hal.2018.07.004] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2018] [Revised: 07/09/2018] [Accepted: 07/10/2018] [Indexed: 06/08/2023]
Abstract
The effect of cyanophage infection and lysis on the dynamics of the hepatotoxin nodularin (NOD) and other non-ribosomal peptides (NRPs) produced by cyanobacteria is poorly understood. In this study, changes in concentration of NOD and other NRPs during cyanophage infection of the filamentous cyanobacteria Nodularia spumigena were assessed using incubation experiments. Viral infection and lysis were associated with a significant reduction (93% at the 96 h post infection) of N. spumigena cell density. While no correlation between N. spumigena abundance and total concentration of NOD (ng mL-1) within the infected cells was observed, cellular NOD quota (ng cell-1) gradually increased in the remaining cyanophage resistant N. spumigena subpopulation. Lysis of N. spumigena cells resulted in a substantial increase (>57 times) of dissolved NOD concentration in the culture medium. The relative concentration of other cyclic (anabaenopeptins) and linear (aeruginosins, spumigins) NRPs produced by N. spumigena also increased in response to cyanophage addition. This study highlights the importance of cyanophage infection on the population toxicity of filamentous cyanobacteria and demonstrates a significant contribution of virus-mediated cell lysis on the conversion of NOD from the particulate to dissolved phase.
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Affiliation(s)
- Sigitas Šulčius
- Laboratory of Algology and Microbial Ecology, Nature Research Centre, Akademijos str. 2, LT-08412, Vilnius, Lithuania; Center for Ecology and Evolution in Microbial Model Systems, Department of Biology and Environmental Science, Linnaeus University, Barlastgatan 11, SE-39231, Kalmar, Sweden.
| | - Hanna Mazur-Marzec
- Department of Marine Biotechnology, Institute of Oceanography, University of Gdańsk, Marszałka Józefa Piłsudskiego 46, PL-81378, Gdynia, Poland; Institute of Oceanology, Polish Academy of Sciences, Powstańców Warszawy 55, PL-81712 Sopot, Poland
| | - Irma Vitonytė
- Laboratory of Algology and Microbial Ecology, Nature Research Centre, Akademijos str. 2, LT-08412, Vilnius, Lithuania
| | - Kotryna Kvederavičiūtė
- MAP Kinase Resource, Melchiorstrasse 9, CH-3027, Bern, Switzerland; Institute of Biotechnology, Vilnius University, Saulėtekio av. 7, LT-10257, Vilnius, Lithuania
| | - Jolita Kuznecova
- Laboratory of Algology and Microbial Ecology, Nature Research Centre, Akademijos str. 2, LT-08412, Vilnius, Lithuania
| | - Eugenijus Šimoliūnas
- Institute of Biochemistry, Vilnius University, Saulėtekio av. 7, LT-10257, Vilnius, Lithuania
| | - Karin Holmfeldt
- Center for Ecology and Evolution in Microbial Model Systems, Department of Biology and Environmental Science, Linnaeus University, Barlastgatan 11, SE-39231, Kalmar, Sweden
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Driscoll CB, Meyer KA, Šulčius S, Brown NM, Dick GJ, Cao H, Gasiūnas G, Timinskas A, Yin Y, Landry ZC, Otten TG, Davis TW, Watson SB, Dreher TW. A closely-related clade of globally distributed bloom-forming cyanobacteria within the Nostocales. Harmful Algae 2018; 77:93-107. [PMID: 30005805 DOI: 10.1016/j.hal.2018.05.009] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2018] [Revised: 05/18/2018] [Accepted: 05/24/2018] [Indexed: 06/08/2023]
Abstract
In order to better understand the relationships among current Nostocales cyanobacterial blooms, eight genomes were sequenced from cultured isolates or from environmental metagenomes of recent planktonic Nostocales blooms. Phylogenomic analysis of publicly available sequences placed the new genomes among a group of 15 genomes from four continents in a distinct ADA clade (Anabaena/Dolichospermum/Aphanizomenon) within the Nostocales. This clade contains four species-level groups, two of which include members with both Anabaena-like and Aphanizomenon flos-aquae-like morphology. The genomes contain many repetitive genetic elements and a sizable pangenome, in which ABC-type transporters are highly represented. Alongside common core genes for photosynthesis, the differentiation of N2-fixing heterocysts, and the uptake and incorporation of the major nutrients P, N and S, we identified several gene pathways in the pangenome that may contribute to niche partitioning. Genes for problematic secondary metabolites-cyanotoxins and taste-and-odor compounds-were sporadically present, as were other polyketide synthase (PKS) and nonribosomal peptide synthetase (NRPS) gene clusters. By contrast, genes predicted to encode the ribosomally generated bacteriocin peptides were found in all genomes.
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Affiliation(s)
- Connor B Driscoll
- Department of Microbiology, Oregon State University, 226 Nash Hall, Corvallis, OR, 97331, USA
| | - Kevin A Meyer
- Department of Earth & Environmental Sciences, University of Michigan, Ann Arbor, MI 48109-1005, USA; Cooperative Institute for Great Lakes Research (CIGLR), University of Michigan, Ann Arbor, MI 48109-1005, USA
| | - Sigitas Šulčius
- Laboratory of Algology and Microbial Ecology, Akademijos Str. 2, LT-08412, Vilnius, Lithuania
| | - Nathan M Brown
- Department of Microbiology, Oregon State University, 226 Nash Hall, Corvallis, OR, 97331, USA
| | - Gregory J Dick
- Department of Earth & Environmental Sciences, University of Michigan, Ann Arbor, MI 48109-1005, USA
| | - Huansheng Cao
- Biodesign Center for Fundamental and Applied Microbiomics, Arizona State University, 427 E Tyler Mall, Tempe, AZ 85287, USA
| | - Giedrius Gasiūnas
- Department of Protein-DNA Interactions, Institute of Biotechnology, Vilnius University, Saulėtekio av. 7, LT-10257, Vilnius, Lithuania
| | - Albertas Timinskas
- Department of Bioinformatics, Institute of Biotechnology, Vilnius University, Saulėtekio 7, LT-10257 Vilnius, Lithuania
| | - Yanbin Yin
- Department of Biological Sciences, Northern Illinois University, DeKalb, IL, USA
| | - Zachary C Landry
- Department of Microbiology, Oregon State University, 226 Nash Hall, Corvallis, OR, 97331, USA
| | - Timothy G Otten
- Department of Microbiology, Oregon State University, 226 Nash Hall, Corvallis, OR, 97331, USA
| | - Timothy W Davis
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43402, USA
| | - Susan B Watson
- Environment and Climate Change Canada, Canada Centre for Inland Waters, Burlington, ON L7S 1A1, Canada
| | - Theo W Dreher
- Department of Microbiology, Oregon State University, 226 Nash Hall, Corvallis, OR, 97331, USA; Center for Genome Research and Biocomputing, Oregon State University, Corvallis, OR 97331, USA.
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Aoki J, Kawamata T, Kodaka A, Minakawa M, Imamura N, Tsuzuki M, Asayama M. Biofuel production utilizing a dual-phase cultivation system with filamentous cyanobacteria. J Biotechnol 2018; 280:55-61. [PMID: 29678391 DOI: 10.1016/j.jbiotec.2018.04.011] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2017] [Revised: 03/29/2018] [Accepted: 04/16/2018] [Indexed: 01/11/2023]
Abstract
Biomass yields and biofuel production were examined in a dual (solid and liquid)-phase cultivation system (DuPHA) with the unique filamentous cyanobacteria, Pseudanabaena sp. ABRG 5-3 and Limnothrix sp. SK1-2-1. Continuous circular cultivation was driven under the indoor closed (IC) or indoor opened (IO) conditions and provided biomass yields of approximately 8-27 g dry cell weight (DCW) floor m-2 d-1. Alkanes of heptadecane (C17H36) or pentadecane (C15H32) as liquid biofuels were also recovered from the lower liquid-phase, in which cyanobacteria were dropped from the upper solid-phase and continuously cultivated with a small amount of medium. After the main cultivation in DuPHA, the upper solid-phase of a cotton cloth on which cyanobacteria grew was dried and directly subjected to a combustion test. This resulted in the thermal power (kJ s-1) of the cloth with microalgae increasing approximately 20-50% higher than that of the cloth only, suggesting a possibility of using the solid phase with microalgae as solid biofuel.
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Affiliation(s)
- Jinichi Aoki
- College of Agriculture, Ibaraki University, 3-21-1 Ami, Ibaraki, 300-0393, Japan; United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, 3-5-8 Fuchu, Tokyo 183-8509, Japan
| | - Toru Kawamata
- College of Agriculture, Ibaraki University, 3-21-1 Ami, Ibaraki, 300-0393, Japan
| | - Asuka Kodaka
- College of Agriculture, Ibaraki University, 3-21-1 Ami, Ibaraki, 300-0393, Japan
| | - Masayuki Minakawa
- College of Agriculture, Ibaraki University, 3-21-1 Ami, Ibaraki, 300-0393, Japan
| | - Nobukazu Imamura
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan
| | - Mikio Tsuzuki
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan
| | - Munehiko Asayama
- College of Agriculture, Ibaraki University, 3-21-1 Ami, Ibaraki, 300-0393, Japan; Japan Science and Technology Agency (JST), Precursory Research for Embryonic Science and Technology (PRESTO), 4-1-8 Honcho Kawaguchi, Saitama, 332-0012, Japan; United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, 3-5-8 Fuchu, Tokyo 183-8509, Japan.
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19
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Sugawara T, Chinzei M, Numano S, Kitazaki C, Asayama M. Flocculation and pentadecane production of a novel filamentous cyanobacterium Limnothrix sp. strain SK1-2-1. Biotechnol Lett 2018; 40:829-836. [PMID: 29508163 DOI: 10.1007/s10529-018-2525-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2017] [Accepted: 02/06/2018] [Indexed: 12/25/2022]
Abstract
OBJECTIVE A novel filamentous cyanobacterium, a photosynthesizing microorganism, was isolated from a river, and its unique features of flocculation and pentadecane production were characterized. RESULTS Microscopic observations and a phylogenetic analysis with 16S rDNA revealed that this strain was a Limnothrix species denoted as the SK1-2-1 strain. Auto cell-flocculation was observed when this strain was exposed to a two-step incubation involving a standing cultivation following a shaking preincubation. Flocculation was enhanced by blue light at a wavelength at 470 nm and irradiation for several hours to 1 day. Moreover, the strain exhibiting exponential cell growth may preferentially accumulate alkanes as pentadecane C15H32 alkane, which may be used as jet fuel, at a range of approximately 1% in the dry cell weight of flocculated cells. CONCLUSION This is the first study on biofuel production using flocculated cells in which the specific manner of production may be regulated by cultivation conditions.
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Affiliation(s)
- Takuya Sugawara
- Laboratory of Molecular Genetics, College of Agriculture, Ibaraki University, 3-21-1 Ami, Ibaraki, 300-0393, Japan
| | - Mariko Chinzei
- Laboratory of Molecular Genetics, College of Agriculture, Ibaraki University, 3-21-1 Ami, Ibaraki, 300-0393, Japan
| | - Setsuko Numano
- Laboratory of Molecular Genetics, College of Agriculture, Ibaraki University, 3-21-1 Ami, Ibaraki, 300-0393, Japan
| | - Chifumi Kitazaki
- Laboratory of Molecular Genetics, College of Agriculture, Ibaraki University, 3-21-1 Ami, Ibaraki, 300-0393, Japan
| | - Munehiko Asayama
- Laboratory of Molecular Genetics, College of Agriculture, Ibaraki University, 3-21-1 Ami, Ibaraki, 300-0393, Japan. .,Japan Science and Technology Agency (JST), Precursory Research for Embryonic Science and Technology (PRESTO), 4-1-8 Honcho Kawaguchi, Saitama, 332-0012, Japan. .,United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, 3-5-8 Saiwaicho Fuchu, Tokyo, 183-8509, Japan.
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Stauch-White K, Srinivasan VN, Camilla Kuo-Dahab W, Park C, Butler CS. The role of inorganic nitrogen in successful formation of granular biofilms for wastewater treatment that support cyanobacteria and bacteria. AMB Express 2017; 7:146. [PMID: 28697582 PMCID: PMC5503847 DOI: 10.1186/s13568-017-0444-8] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2017] [Accepted: 06/22/2017] [Indexed: 11/29/2022] Open
Abstract
Recently, the use of phototrophs for wastewater treatment has been revisited because of new approaches to separate them from effluent streams. One manifestation uses oxygenic photogranules (OPGs) which are dense, easily-settleable granular biofilms of cyanobacteria, which surrounding populations of heterotrophs, autotrophs, and microalgae. OPGs can remove COD and nitrogenous compounds without external aeration. To better grow and maintain biomass in the proposed wastewater process, this study seeks to understand the factors that contribute to successful granulation. Availability of initial inorganic nitrogen, particularly ammonium, was associated with successful cultivation of OPGs. In the first days of granulation, a decrease in ammonium coupled with an increase in a cyanobacterial-specific 16S rRNA gene, may suggest that ammonium was assimilated in cyanobacteria offering a competitive environment for growth. Though both successful and unsuccessful OPG formation demonstrated a shift from non-phototrophic bacterial dominated communities on day 0 to cyanobacterial dominated communities on day 42, the successful community had a greater relative abundance (46%) of OTUs associated with genera Oscillatoria and Geitlernema than the unsuccessful community (27%), supporting that filamentous cyanobacteria are essential for successful OPG formation. A greater concentration of chlorophyll b in the unsuccessful OPG formation suggested a greater abundance of algal species. This study offers indicators of granulation success, notably availability of inorganic nitrogen and chlorophyll a and b concentrations for monitoring the health and growth of biomass for a potential OPG process.
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Affiliation(s)
- Kristie Stauch-White
- Department of Civil and Environmental Engineering, University of Massachusetts, Amherst, 01003 USA
| | - Varun N. Srinivasan
- Department of Civil and Environmental Engineering, University of Massachusetts, Amherst, 01003 USA
| | - W. Camilla Kuo-Dahab
- Department of Civil and Environmental Engineering, University of Massachusetts, Amherst, 01003 USA
| | - Chul Park
- Department of Civil and Environmental Engineering, University of Massachusetts, Amherst, 01003 USA
| | - Caitlyn S. Butler
- Department of Civil and Environmental Engineering, University of Massachusetts, Amherst, 01003 USA
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Sneed JM, Meickle T, Engene N, Reed S, Gunasekera S, Paul VJ. Bloom dynamics and chemical defenses of benthic cyanobacteria in the Indian River Lagoon, Florida. Harmful Algae 2017; 69:75-82. [PMID: 29122244 DOI: 10.1016/j.hal.2017.10.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2017] [Revised: 10/03/2017] [Accepted: 10/06/2017] [Indexed: 05/27/2023]
Abstract
Cyanobacterial blooms are predicted to become more prominent in the future as a result of increasing seawater temperatures and the continued addition of nutrients to coastal waters. Many benthic marine cyanobacteria have potent chemical defenses that protect them from top down pressures and contribute to the persistence of blooms. Blooms of benthic cyanobacteria have been observed along the coast of Florida and within the Indian River Lagoon (IRL), a biodiverse estuary system that spans 250km along Florida's east coast. In this study, the cyanobacterial bloom progression at three sites within the central IRL was monitored over the course of two summers. The blooms consisted of four unique cyanobacterial species, including the recently described Okeania erythroflocculosa. The cyanobacteria produced a range of known bioactive compounds including malyngolide, lyngbyoic acid, microcolins A-B, and desacetylmicrocolin B. Ecologically-relevant assays showed that malyngolide inhibited the growth of marine fungi (Dendryphiella salina and Lindra thalassiae); microcolins A-B and desacetylmicrocolin B inhibited feeding by a generalist herbivore, the sea urchin Lytechinus variegatus; and lyngbyoic acid inhibited fungal growth and herbivore feeding. These chemical defenses likely contribute to the persistence of cyanobacterial blooms in the IRL during the summer growing period.
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Affiliation(s)
- Jennifer M Sneed
- Smithsonian Marine Station at Fort Pierce, 701 Seaway Dr., Ft. Pierce, FL 34949, USA.
| | - Theresa Meickle
- Smithsonian Marine Station at Fort Pierce, 701 Seaway Dr., Ft. Pierce, FL 34949, USA
| | - Niclas Engene
- Smithsonian Marine Station at Fort Pierce, 701 Seaway Dr., Ft. Pierce, FL 34949, USA; Department of Biological Sciences, Florida International University, Miami, FL 33199, USA
| | - Sherry Reed
- Smithsonian Marine Station at Fort Pierce, 701 Seaway Dr., Ft. Pierce, FL 34949, USA
| | - Sarath Gunasekera
- Smithsonian Marine Station at Fort Pierce, 701 Seaway Dr., Ft. Pierce, FL 34949, USA
| | - Valerie J Paul
- Smithsonian Marine Station at Fort Pierce, 701 Seaway Dr., Ft. Pierce, FL 34949, USA
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22
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Abeynayaka HDL, Asaeda T, Kaneko Y. Buoyancy Limitation of Filamentous Cyanobacteria under Prolonged Pressure due to the Gas Vesicles Collapse. Environ Manage 2017; 60:293-303. [PMID: 28477239 DOI: 10.1007/s00267-017-0875-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2016] [Accepted: 04/25/2017] [Indexed: 05/17/2023]
Abstract
Freshwater cyanobacterium Pseudanabaena galeata were cultured in chambers under artificially generated pressures, which correspond to the hydrostatic pressures at deep water. Variations occurred in gas vesicles volume, and buoyancy state of cells under those conditions were analyzed at different time intervals (5 min, 1 day, and 5 days). Variations in gas vesicles morphology of cells were observed by transmission electron microscopy images. Settling velocity (Vs) of cells which governs the buoyancy was observed with the aid of a modified optical microscope. Moreover, effects of the prolonged pressure on cell ballast composition (protein and polysaccharides) were examined. Elevated pressure conditions reduced the cell ballast and caused a complete disappearance of gas vesicles in Pseudanabaena galeata cells. Hence cyanobacteria cells were not able to float within the study period. Observations and findings of the study indicate the potential application of hydrostatic pressure, which naturally occurred in hypolimnion of lakes, to inhibit the re-suspension of cyanobacteria cells.
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Affiliation(s)
| | - Takashi Asaeda
- Department of Environmental Science and Technology, Saitama University, Saitama, Japan.
| | - Yasuko Kaneko
- Graduate School of Science and Engineering, Saitama University, Saitama, Japan
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23
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Rai J, Kumar D, Pandey LK, Yadav A, Gaur JP. Potential of cyanobacterial biofilms in phosphate removal and biomass production. J Environ Manage 2016; 177:138-144. [PMID: 27088210 DOI: 10.1016/j.jenvman.2016.04.010] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2015] [Revised: 03/08/2016] [Accepted: 04/06/2016] [Indexed: 06/05/2023]
Abstract
Four cyanobacterial biofilms, raised from cyanobacterial mats and dominated by Phormidium and Oscillatoria spp., were successfully grown attached to polyester mesh discs, and were tested for their probable application in [Formula: see text] -P removal from domestic sewage and other nutrient enriched wastewaters. Biofilm # 2, dominated by Phormidium fragile, best removed [Formula: see text] -P; nevertheless, some of it also grew outside the substrate making harvesting difficult. Other biofilms also efficiently removed [Formula: see text] -P from the medium in the following order: Biofilm # 1 > Biofilm # 3 > Biofilm # 4. Their growths were restricted to discs and are therefore better candidates as they can be efficiently harvested after [Formula: see text] -P removal. [Formula: see text] -P removal was primarily due to its uptake during growth of the biofilm rather than because of precipitation as pH of the medium remained <8.5. [Formula: see text] -N concentration in the medium determined [Formula: see text] -P removal efficiency of the test biofilms and therefore optimum N:P ratio is necessary for optimizing [Formula: see text] -P removal. The test biofilms could also efficiently remove [Formula: see text] -N from the medium.
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Affiliation(s)
- Jyoti Rai
- Laboratory of Algal Biology, Department of Botany, Banaras Hindu University, Varanasi 221 005, India
| | - Dhananjay Kumar
- Department of Botany, School of Life Sciences, H.N.B. Garhwal University, Garhwal, Srinagar 246 174, India
| | - Lalit K Pandey
- Laboratory of Algal Biology, Department of Botany, Banaras Hindu University, Varanasi 221 005, India; Department of Marine Science, Incheon National University, Incheon 406 840, Republic of Korea
| | - Arpana Yadav
- Laboratory of Algal Biology, Department of Botany, Banaras Hindu University, Varanasi 221 005, India
| | - J P Gaur
- Laboratory of Algal Biology, Department of Botany, Banaras Hindu University, Varanasi 221 005, India.
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Gandola E, Antonioli M, Traficante A, Franceschini S, Scardi M, Congestri R. Dataset exploited for the development and validation of automated cyanobacteria quantification algorithm, ACQUA. Data Brief 2016; 8:817-23. [PMID: 27500194 PMCID: PMC4957007 DOI: 10.1016/j.dib.2016.06.042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2016] [Revised: 06/16/2016] [Accepted: 06/23/2016] [Indexed: 11/26/2022] Open
Abstract
The estimation and quantification of potentially toxic cyanobacteria in lakes and reservoirs are often used as a proxy of risk for water intended for human consumption and recreational activities. Here, we present data sets collected from three volcanic Italian lakes (Albano, Vico, Nemi) that present filamentous cyanobacteria strains at different environments. Presented data sets were used to estimate abundance and morphometric characteristics of potentially toxic cyanobacteria comparing manual Vs. automated estimation performed by ACQUA (“ACQUA: Automated Cyanobacterial Quantification Algorithm for toxic filamentous genera using spline curves, pattern recognition and machine learning” (Gandola et al., 2016) [1]). This strategy was used to assess the algorithm performance and to set up the denoising algorithm. Abundance and total length estimations were used for software development, to this aim we evaluated the efficiency of statistical tools and mathematical algorithms, here described. The image convolution with the Sobel filter has been chosen to denoise input images from background signals, then spline curves and least square method were used to parameterize detected filaments and to recombine crossing and interrupted sections aimed at performing precise abundances estimations and morphometric measurements.
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Affiliation(s)
- Emanuele Gandola
- University of Rome Tor Vergata, Department of Biology, Via della Ricerca Scientifica 1, 00133 Rome, Italy
- Department of Mathematics, University of Rome Tor Vergata, Via della Ricerca Scientifica 1, 00133 Rome, Italy
- Corresponding author at: University of Rome Tor Vergata, Department of Biology, Via della Ricerca Scientifica 1, 00133 Rome, Italy.University of Rome Tor Vergata, Department of BiologyVia della Ricerca Scientifica 1Rome00133Italy
| | - Manuela Antonioli
- University of Rome Tor Vergata, Department of Biology, Via della Ricerca Scientifica 1, 00133 Rome, Italy
- National Institute for Infectious Diseases ‘L. Spallanzani’ IRCCS, Via Portuense, 292, 00149 Rome, Italy
- Freiburg Institute for Advanced Studies (FRIAS), University of Freiburg, Freiburg 79104, Germany
| | - Alessio Traficante
- The University of Manchester, Jodrell Bank Centre for Astrophysics, School of Physics and Astronomy, Manchester M13 9PL, UK
| | - Simone Franceschini
- University of Rome Tor Vergata, Department of Biology, Via della Ricerca Scientifica 1, 00133 Rome, Italy
| | - Michele Scardi
- University of Rome Tor Vergata, Department of Biology, Via della Ricerca Scientifica 1, 00133 Rome, Italy
| | - Roberta Congestri
- University of Rome Tor Vergata, Department of Biology, Via della Ricerca Scientifica 1, 00133 Rome, Italy
- AlgaRes, Spin off of University of Rome Tor Vergata, Via della Ricerca Scientifica 1, 00133 Rome, Italy
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Sen S, Agrawal C, Mishra Y, Rai S, Chatterjee A, Yadav S, Singh S, Rai LC. Exploring the membrane proteome of the diazotropic cyanobacterium Anabaena PCC7120 through gel-based proteomics and in silico approaches. J Proteomics 2015. [PMID: 26210591 DOI: 10.1016/j.jprot.2015.07.022] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
UNLABELLED This paper focuses on the gel-based membrane proteomics from diazotrophic cyanobacterium Anabaena PCC7120 by modifying the protocol of Hall et al. [1]. The bioinformatic analysis revealed that 59 (29 integral, 30 peripheral) of the 67 proteins identified were membrane proteins. Of the 29 integral proteins, except Alr0834, the remaining 28 contained 1-12 transmembrane helices. Sixteen integral proteins harboring signal peptides (Sec/TAT/LipoP) suggest that protein targeting in Anabaena involves both sec-dependent and sec-independent pathways. While majority of photosynthesis and respiration proteins (21 of 24) were confined to broad pH gradient the hypothetical and unknown (12 of 13), and cell envelope proteins (3 of 3) preferred the narrow pH range. Of the 5 transporters and binding proteins, Na(+)/H(+)-exchanging protein and Alr2372 were present in broad, pstS1 and cmpD in narrow and cmpA was common to both pH ranges. The distribution of proteins across pH gradient, thus clearly indicates the functional and structural diversity in membrane proteome of Anabaena. It requires mention that protochlorophyllide oxido-reductase, Na(+)/H(+)-exchanging protein, All1355, Alr2055, Alr3514, Alr2903 and Alr2751 were new entries to the 2DE membrane protein profile of Anabaena. This study demonstrates suitability of the modified protocol for the study of membrane protein from filamentous cyanobacteria. SIGNIFICANCE Anabaena sp. PCC7120 is used as a model organism due to its agriculture significance as biofertilizer, close resemblance with higher plant chloroplast and availability of full genome sequence. Although cytosolic proteome has been explored a lot membrane proteins are still understudied as they are notoriously difficult to display using 2-D technology. Identification and characterization of these proteins is therefore required to elucidate and understand cellular mechanisms. The purpose of this study was to develop a protocol suitable for membrane protein extraction from Anabaena. Additionally, by homology comparison or domain assignment a possible function could be ascribed to novel uncharacterized proteins which will serve as a useful reference for further detailed studies of membrane system in filamentous cyanobacteria. Resolution of membrane proteins ranging from least (single transmembrane helix) to highly hydrophobic (several transmembrane helices) one on 2D gels recommends the gel based approach for identification of membrane proteomics from filamentous cyanobacteria. This article is part of a Special Issue entitled: Proteomics in India.
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Affiliation(s)
- Sonia Sen
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Chhavi Agrawal
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Yogesh Mishra
- Department of Botany, Punjab University, Sector 14, Chandigarh 160014, India
| | - Shweta Rai
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Antra Chatterjee
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Shivam Yadav
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Shilpi Singh
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - L C Rai
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India.
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Johnson TJ, Hildreth MB, Gu L, Zhou R, Gibbons WR. Testing a dual-fluorescence assay to monitor the viability of filamentous cyanobacteria. J Microbiol Methods 2015; 113:57-64. [PMID: 25889626 DOI: 10.1016/j.mimet.2015.04.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2015] [Revised: 04/10/2015] [Accepted: 04/12/2015] [Indexed: 10/23/2022]
Abstract
Filamentous cyanobacteria are currently being engineered to produce long-chain organic compounds, including 3rd generation biofuels. Because of their filamentous morphology, standard methods to quantify viability (e.g., plate counts) are not possible. This study investigated a dual-fluorescence assay based upon the LIVE/DEAD® BacLight™ Bacterial Viability Kit to quantify the percent viability of filamentous cyanobacteria using a microplate reader in a high throughput 96-well plate format. The manufacturer's protocol calls for an optical density normalization step to equalize the numbers of viable and non-viable cells used to generate calibration curves. Unfortunately, the isopropanol treatment used to generate non-viable cells released a blue pigment that altered absorbance readings of the non-viable cell solution, resulting in an inaccurate calibration curve. Thus we omitted this optical density normalization step, and carefully divided cell cultures into two equal fractions before the isopropanol treatment. While the resulting calibration curves had relatively high correlation coefficients, their use in various experiments resulted in viability estimates ranging from below 0% to far above 100%. We traced this to the apparent inaccuracy of the propidium iodide (PI) dye that was to stain only non-viable cells. Through further analysis via microplate reader, as well as confocal and wide-field epi-fluorescence microscopy, we observed non-specific binding of PI in viable filamentous cyanobacteria. While PI will not work for filamentous cyanobacteria, it is possible that other fluorochrome dyes could be used to selectively stain non-viable cells. This will be essential in future studies for screening mutants and optimizing photobioreactor system performance for filamentous cyanobacteria.
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Affiliation(s)
- Tylor J Johnson
- Department of Biology and Microbiology, South Dakota State University, PO Box 2204A, Brookings, SD, USA
| | - Michael B Hildreth
- Department of Biology and Microbiology, South Dakota State University, PO Box 2204A, Brookings, SD, USA
| | - Liping Gu
- Department of Biology and Microbiology, South Dakota State University, PO Box 2204A, Brookings, SD, USA
| | - Ruanbao Zhou
- Department of Biology and Microbiology, South Dakota State University, PO Box 2204A, Brookings, SD, USA
| | - William R Gibbons
- Department of Biology and Microbiology, South Dakota State University, PO Box 2204A, Brookings, SD, USA
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