Highly clustered mating networks in naturally fragmented riparian tree populations

Understanding how spatial patterns of mating and gene flow respond to habitat loss and geographical isolation is a crucial aspect of forest fragmentation genetics. Naturally fragmented riparian tree populations exhibit unique characteristics that significantly influence these patterns. In this study, we investigate mating patterns, pollen-mediated gene flow, and genetic diversity in relict populations of Frangula alnus in southern Spain by testing specific hypotheses related to the riparian habitat. We employ a novel approach that combines paternity analysis, particularly suited for small and isolated populations, with complex network theory and Bayesian models to predict mating likelihood among tree pairs. Our findings reveal a prevalence of short-distance pollination, resulting in spatially driven local mating clusters with a distinct subset of trees being highly connected in the mating network. Additionally, we observe numerous pollination events over distances of hundreds of metres and considerable pollen immigration. Local neighbourhood density is the primary factor influencing within-population mating patterns and pollen dispersal; moreover, mating network properties reflect the population's size and spatial configuration. Conversely, among-population pollen dispersal is mainly determined by tree size, which influences floral display. Our results do not support a major role of directional pollen dispersal in longitudinal trends of genetic diversity. We provide evidence that long-term fragmented tree populations persist in unique environments that shape mating patterns and impose constraints to pollen-mediated gene flow. Nevertheless, even seemingly strongly isolated populations can maintain functional connectivity over extended periods, especially when animal-mediated mating networks promote genetic diversity, as in this riparian tree species.

Strong above-ground impacts of a non-native ungulate do not cascade to impact below-ground functioning in a boreal ecosystem

1. Experimental studies across biomes demonstrate that herbivores can have significant effects on ecosystem functioning. Herbivore effects, however, can be highly variable with studies demonstrating positive, neutral or negative relationships between herbivore presence and different components of ecosystems. Mixed effects are especially likely in the soil, where herbivore effects are largely indirect mediated through effects on plants. 2. We conducted a long-term experiment to disentangle the effects of non-native moose in boreal forests on plant communities, nutrient cycling, soil composition and soil organism communities. 3. To explore the effect of moose on soils, we conduct separate analyses on the soil organic and mineral horizons. Our data come from 11 paired exclosure-control plots in eastern and central Newfoundland, Canada that provide insight into 22-25 years of moose herbivory. We fit piecewise structural equations models (SEM) to data for the organic and mineral soil horizons to test different pathways linking moose to above-ground and below-ground functioning. 4. The SEMs revealed that moose exclusion had direct positive impacts on adult tree count and an indirect negative impact on shrub percent cover mediated by adult tree count. We detected no significant impact of moose on soil microbial C:N ratio or net nitrogen mineralization in the organic or mineral soil horizon. Soil temperature and moisture, however, was more than twice as variable in the presence (i.e. control) than absence (i.e. exclosure) of moose. Overall, we observed clear impacts of moose on above-ground forest components with limited indirect effects below-ground. Even after 22-25 years of exclusion, we did not find any evidence of moose impacts on soil microbial C:N ratio and net nitrogen mineralization. 5. Our long-term study and mechanistic path analysis demonstrates that soils can be resilient to ungulate herbivore effects despite evidence of strong effects above-ground. Long-term studies and analyses such as this one are relatively rare yet critical for reconciling some of the context-dependency observed across studies of ungulates effects on ecosystem functions. Such studies may be particularly valuable in ecosystems with short growing seasons such as the boreal forest.

The rise of hyperabundant native generalists threatens both humans and nature

In many disturbed terrestrial landscapes, a subset of native generalist vertebrates thrives. The population trends of these disturbance-tolerant species may be driven by multiple factors, including habitat preferences, foraging opportunities (including crop raiding or human refuse), lower mortality when their predators are persecuted (the 'human shield' effect) and reduced competition due to declines of disturbance-sensitive species. A pronounced elevation in the abundance of disturbance-tolerant wildlife can drive numerous cascading impacts on food webs, biodiversity, vegetation structure and people in coupled human-natural systems. There is also concern for increased risk of zoonotic disease transfer to humans and domestic animals from wildlife species with high pathogen loads as their abundance and proximity to humans increases. Here we use field data from 58 landscapes to document a supra-regional phenomenon of the hyperabundance and community dominance of Southeast Asian wild pigs and macaques. These two groups were chosen as prime candidates capable of reaching hyperabundance as they are edge adapted, with gregarious social structure, omnivorous diets, rapid reproduction and high tolerance to human proximity. Compared to intact interior forests, population densities in degraded forests were 148% and 87% higher for wild boar and macaques, respectively. In landscapes with >60% oil palm coverage, wild boar and pig-tailed macaque estimated abundances were 337% and 447% higher than landscapes with <1% oil palm coverage, respectively, suggesting marked demographic benefits accrued by crop raiding on calorie-rich food subsidies. There was extreme community dominance in forest landscapes with >20% oil palm cover where two pig and two macaque species accounted for >80% of independent camera trap detections, leaving <20% for the other 85 mammal species >1 kg considered. Establishing the population trends of pigs and macaques is imperative since they are linked to cascading impacts on the fauna and flora of local forest ecosystems, disease and human health, and economics (i.e., crop losses). The severity of potential negative cascading effects may motivate control efforts to achieve ecosystem integrity, human health and conservation objectives. Our review concludes that the rise of native generalists can be mediated by specific types of degradation, which influences the ecology and conservation of natural areas, creating both positive and detrimental impacts on intact ecosystems and human society.

Behavioral adaptation of sympatric rodents to early germination of oak acorns: radicle pruning and embryo excision

The seed germination schedule is a key factor affecting the food-hoarding behavior of animals and the seedling regeneration of plants. However, little is known about the behavioral adaptation of rodents to the rapid germination of acorns. In this study, we provided Quercus variabilis acorns to several rodent species to investigate how food-hoarding animals respond to seed germination. We found that only Apodemus peninsulae adopted embryo excision behavior to counteract seed germination, which is the first report of embryo excision in nonsquirrel rodents. We speculated that this species may be at an early stage of the evolutionary response to seed perishability in rodents, given the low rate of embryo excision in this species. On the contrary, all rodent species preferred to prune the radicles of germinating acorns before caching, suggesting that radicle pruning is a stable and more general foraging behavior strategy for food-hoarding rodents. Furthermore, scatter-hoarding rodents preferred to scatter-hoard and prune more germinating acorns, whereas they consumed more nongerminating acorns. Acorns with embryos excised rather than radicles pruned were much less likely to germinate than intact acorns, suggesting a behavioral adaptation strategy by rodents to the rapid germination of recalcitrant seeds. This study provides insight into the impact of early seed germination on plant-animal interactions.

Predicting how defaunation-induced changes in seed predation and dispersal will affect tropical tree populations

The loss of large animals due to overhunting and habitat loss potentially affects tropical tree populations and carbon cycling. Trees reliant on large-bodied seed dispersers are thought to be particularly negatively affected by defaunation. But besides seed dispersal, defaunation can also increase or decrease seed predation. It remains unclear how these different defaunation effects on early life stages ultimately affect tree population dynamics. We reviewed the literature on how tropical animal loss affects different plant life stages, and we conducted a meta-analysis of how defaunation affects seed predation. We used this information to parameterize models that altered matrix projection models from a suite of tree species to simulate defaunation-caused changes in seed dispersal and predation. We assessed how applying these defaunation effects affected population growth rates. On average, population-level effects of defaunation were negligible, suggesting that defaunation may not cause the massive reductions in forest carbon storage that have been predicted. In contrast to previous hypotheses, we did not detect an effect of seed size on changes in seed predation rates. The change in seed predation did not differ significantly between exclosure experiments and observational studies, although the results of observational studies were far more variable. Although defaunation surely affects certain tree taxa, species that benefit or are harmed by it and net changes in forest carbon storage cannot currently be predicted based on available data. Further research on how factors such as seed predation vary across tree species and defaunation scenarios is necessary for understanding cascading changes in species composition and diversity.

Exploitation competition between seed predators and dispersers introduced to Hawaiian forests

Exploitation competition occurs when one group of organisms reduces the availability of a resource for another group of organisms. For instance, plants produce a certain number of fruits for seed dispersal by fruit-eating animals (hereafter frugivores), and fruit consumption by one group of frugivores can reduce the number of fruits available for other frugivores. However, it is uncertain whether exploitation competition is common among frugivores, particularly in novel ecosystems, where food resources are generally thought to be abundant and invasive species are dietary generalists. In a novel ecosystem in Hawai'i, we used gut passage experiments with captive birds to identify roles of introduced frugivores and found they were either distinctly seed dispersers or predators. We then experimentally tested how frugivory by seed predators influenced frugivory by seed dispersers. Specifically, we used exclosures around fruiting plants that blocked seed predator access, while permitting seed disperser access, and we had two control treatments that allowed for access by all frugivores (n=139 plants). When seed predators were excluded from plants, there was more frugivory by dispersers compared to controls, and results varied by year and plant species. Overall, we show that introduced frugivores occupied distinct ecological roles (seed predator or seed disperser), exploitation competition occurred between these introduced frugivore groups, and seed predators had both direct (via seed destruction) and indirect (via reduction in frugivory by dispersers) effects on seed dispersal. Thus, in this novel ecosystem, multiple frugivory is subtractive, and competition for fruit between introduced seed predators and seed dispersers scales up to affect invasions and the conservation of native flora.

Atlantic flower-invertebrate interactions: A data set of occurrence and frequency of floral visits

Encounters between flowers and invertebrates are key events for the functioning of tropical forests. Assessing the structure of networks composed of the interactions between those partners leads to a better understanding of ecosystem functioning and the effects of environmental factors on ecological processes. Gathering such data is, however, costly and time-consuming, especially in the highly diverse tropics. We aimed to provide a comprehensive repository of available flower-invertebrate interaction information for the Atlantic Forest, a South American tropical forest domain. Data were obtained from published works and "gray literature," such as theses and dissertations, as well as self-reports by co-authors. The data set has ~18,000 interaction records forming 482 networks, each containing between one and 1061 interaction links. Each network was sampled for about 200 h or less, with few exceptions. A total of 641 plant genera within 136 different families and 39 orders were reported, with the most abundant and rich families being Asteraceae, Fabaceae, and Rubiaceae. Invertebrates interacting with these plants were all arthropods from 10 orders, 129 families, and 581 genera, comprising 2419 morphotypes (including 988 named species). Hymenoptera was the most abundant and diverse order, with at least six times more records than the second-ranked order (Lepidoptera). The complete data set shows Hymenoptera interacting with all plant orders and also shows Diptera, Lepidoptera, Coleoptera, and Hemiptera to be important nodes. Among plants, Asterales and Fabales had the highest number of interactions. The best sampled environment was forest (~8000 records), followed by pastures and crops. Savanna, grasslands, and urban environments (among others) were also reported, indicating a wide range of approaches dedicated to collecting flower-invertebrate interaction data in the Atlantic Forest domain. Nevertheless, most reported data were from forest understory or lower strata, indicating a knowledge gap about flower-invertebrate interactions at the canopy. Also, access to remote regions remains a limitation, generating sampling bias across the geographical range of the Atlantic Forest. Future studies in these continuous and hard-to-access forested areas will yield important new information regarding the interactions between flowers and invertebrates in the Atlantic Forest. There are no copyright restrictions on the data set. Please cite this data paper if the data are used in publications and teaching events.

On the adequacy of fruit removal as a proxy for fitness in studies of bird-mediated phenotypic selection

PREMISE

In fleshy-fruited plants, fruit removal is widely used as a proxy for plant reproductive success. Nevertheless, this proxy may not accurately reflect the number of seeds dispersed, an assumed better proxy for total fitness (fruit removal × mean number of seeds dispersed per fruit).

METHODS

We examined under what circumstances fruit removal can be reliable as a proxy for total fitness when assessing bird-mediated selection on fruit traits. In three populations of the Blue Passionflower (Passiflora caerulea), we used the number of fruits pecked per plant as a surrogate for fruit removal to estimate phenotypic selection on fruit and seed traits, and simulations of the effect of the fruit-seed number trade-off on the number of fruits removed.

RESULTS

Fruit removal was a good indicator of fitness, accounting for 55 to 68% of the variability in total fitness, measured as total number of seeds removed. Moreover, multivariate selection analyses on fruit crop size, mean fruit diameter and mean seed number using fruit removal as a fitness proxy yielded similar selection regimes to those using total fitness. Simulations showed that producing more fruits, a lower number of seeds per fruit, and a higher variability in seed number can result in a negative relationship between fruit removal and total fitness.

CONCLUSIONS

Our results suggest that fruit removal can be reliably used as a proxy for total fitness when (1) there is a weak fruit number-seed number trade-off, (2) fruit crop size and fruit removal correlate positively, and (3) seed number variability does not largely exceed fruit number variability.

Reciprocity and interaction effectiveness in generalised mutualisms among free-living species

Mutualistic interactions among free-living species generally involve low-frequency interactions and highly asymmetric dependence among partners, yet our understanding of factors behind their emergence is still limited. Using individual-based interactions of a super-generalist fleshy-fruited plant with its frugivore assemblage, we estimated the Resource Provisioning Effectiveness (RPE) and Seed Dispersal Effectiveness (SDE) to assess the balance in the exchange of resources. Plants were highly dependent on a few frugivore species, while frugivores interacted with most individual plants, resulting in strong asymmetries of mutual dependence. Interaction effectiveness was mainly driven by interaction frequency. Despite highly asymmetric dependences, the strong reliance on quantity of fruit consumed determined high reciprocity in rewards between partners (i.e. higher energy provided by the plant, more seedlings recruited), which was not obscured by minor variations in the quality of animal or plant service. We anticipate reciprocity will emerge in low-intimacy mutualisms where the mutualistic outcome largely relies upon interaction frequency.

An early snapshot of plant-herbivore interactions: Psilophyton diakanthon sp. nov. from the Early Devonian of Gaspé (Quebec, Canada)

PREMISE

Trimerophytes are a plexus of early tracheophytes that form the base of the euphyllophyte clade and, thus, represent the link between the earliest land plants and modern-day ferns, sphenophytes, and seed plants. As the best-characterized trimerophyte, the genus Psilophyton occupies a key position in the euphyllophyte fossil record. We describe a new Psilophyton species that has implications for the evolution of plant-animal interactions.

METHODS

The fossil material is preserved by permineralization in the Lower Devonian (Emsian) Battery Point Formation (Québec, Canada) and was studied in serial sections using the cellulose acetate peel technique.

RESULTS

Psilophyton diakanthon sp. nov. differs from other Psilophyton species in possessing fibers that form a discontinuous layer in the inner cortex and two distinct types of spinescent emergences whose anatomy and morphology are consistent with roles in anti-herbivore defense.

CONCLUSIONS

Psilophyton diakanthon adds another species to an already diverse genus. Its two morphologically distinct types of spinescence suggest that herbivory was rampant in plant-animal interactions and demonstrate that anti-herbivory defenses had reached a previously unrecognized level of sophistication by 400 million years ago, in the Early Devonian.

DNA Barcoding Reveals Generalization and Host Overlap in Hummingbird Flower Mites: Implications for the Mating Rendezvous Hypothesis

AbstractHummingbird flower mites are assumed to monopolize single host plant species owing to sexual selection for unique mating rendezvous sites. We tested the main assumption of the mating rendezvous hypothesis-extreme host specialization-by reconstructing interactions among tropical hummingbird flower mites and their host plants using DNA barcoding and taxonomic identifications. We collected 10,654 mites from 489 flowers. We extracted DNA from 1,928 mite specimens and amplified the cytochrome c oxidase I (CO1) DNA barcode. We analyzed the network structure to assess the degree of generalization or specialization of mites to their host plants. We recorded 18 species of hummingbird flower mites from three genera (Proctolaelaps, Rhinoseius, and Tropicoseius) interacting with 14 species of plants. We found that generalist mites are common, and congeneric mite species often share host plants. Our results challenge the assumption of strict specialization that supports this system as an example of mating rendezvous evolution.

Small herbivores with big impacts: Tundra voles (Microtus oeconomus) alter post-fire ecosystem dynamics

Fire is an important ecological disturbance that can reset ecosystems and initiate changes in plant community composition, ecosystem biogeochemistry, and primary productivity. Since herbivores rely on primary producers for food, changes in vegetation may alter plant-herbivore interactions with important - but often unexplored - feedbacks to ecosystems. Here we examined the impact of post-fire changes in plant community composition and structure on habitat suitability and rodent herbivore activity in response to a large, severe, and unprecedented fire in northern Alaskan tundra. In moist acidic tundra where the fire occurred, tundra voles (Microtus oeconomus) are the dominant herbivore and rely on the tussock forming sedge Eriophorum vaginatum for both food and nesting material. Seven to twelve years after the fire, tundra voles were 10 times more abundant at the burned site compared to nearby unburned tundra. Fire increased habitat suitability for voles by increasing plant productivity and biomass, food quality, and cover through both taller vegetation and increased microtopography. As a result of elevated vole abundance, Eriophorum mortality caused by vole herbivory was two orders of magnitude higher than natural mortality and approached the magnitude of the mortality rate resulting directly from the fire. These findings suggest that post-fire increases in herbivore pressure on Eriophorum could, in turn, disrupt graminoid recovery and enhance shrub encroachment. Tundra state transitions from graminoid to shrub dominated are also evident following other disturbances and fertilization experiments, suggesting that as Arctic temperatures rise, greater available nutrients and increased frequencies of large-scale disturbances may also alter plant-animal interactions with cascading impacts on plant communities and ecosystem function.

The important role of animal social status in vertebrate seed dispersal

Seed dispersal directly affects plant establishment, gene flow and fitness. Understanding patterns in seed dispersal is, therefore, fundamental to understanding plant ecology and evolution, as well as addressing challenges of extinction and global change. Our ability to understand dispersal is limited because seeds may be dispersed by multiple agents, and the effectiveness of these agents can be highly variable both among and within species. We provide a novel framework that links seed dispersal to animal social status, a key component of behaviour. Because social status affects individual resource access and movement, it provides a critical link to two factors that determine seed dispersal: the quantity of seeds dispersed and the spatial patterns of dispersal. Social status may have unappreciated effects on post-dispersal seed survival and recruitment when social status affects individual habitat use. Hence, environmental changes, such as selective harvesting and urbanisation, that affect animal social structure may have unappreciated consequences for seed dispersal. This framework highlights these exciting new hypotheses linking environmental change, social structure and seed dispersal. By outlining experimental approaches to test these hypotheses, we hope to facilitate studies across a wide diversity of plant-animal networks, which may uncover emerging hotspots or significant declines in seed dispersal.

Invasive predators affect community-wide pollinator visitation

Disruption of plant-pollinator interactions by invasive predators is poorly understood but may pose a critical threat for native ecosystems. In a multiyear field experiment in Hawai'i, we suppressed abundances of globally invasive predators and then observed insect visitation to flowers of six native plant species. Three plant species are federally endangered (Haplostachys haplostachya, Silene lanceolata, Tetramolopium arenarium) and three are common throughout their range (Bidens menziesii, Dubautia linearis, Sida fallax). Insect visitors were primarily generalist pollinators, including taxa that occur worldwide such as solitary bees (e.g., Lasioglossum impavidum), social bees (e.g., Apis mellifera), and syrphid flies (e.g., Allograpta exotica). We found that suppressing invasive rats (Rattus rattus), mice (Mus musculus), ants (Linepithema humile, Tapinoma melanocephalum), and yellowjacket wasps (Vespula pensylvanica) had positive effects on pollinator visitation to plants in 16 of 19 significant predator-pollinator-plant interactions. We found only positive effects of suppressing rats and ants, and both positive and negative effects of suppressing mice and yellowjacket wasps, on the frequency of interactions between pollinators and plants. Model results predicted that predator eradication could increase the frequency of insect visitation to flowering species, in some cases by more than 90%. Previous results from the system showed that these flowering species produced significantly more seed when flowers were allowed to outcross than when flowers were bagged to exclude pollinators, indicating limited autogamy. Our findings highlight the potential benefits of suppression or eradication of invasive rodents, ants, and yellowjackets to reverse pollination disruption, particularly in locations with high numbers of at-risk plant species or already imperiled pollinator populations.

Plant-animal interactions mediate climatic effects on selection on flowering time

Selection on flowering time in plants is often mediated by multiple agents, including climatic conditions and the intensity of mutualistic and antagonistic interactions with animals. These selective agents can have both direct and indirect effects. For example, climate might not only influence phenotypic selection on flowering time directly by affecting plant physiology, but it can also alter selection indirectly by modifying the seasonal activity and relative timing of animals interacting with plants. We used 21 yr of data to identify the drivers of selection on flowering time in the perennial herb Lathyrus vernus, and to examine if antagonistic plant-animal interactions mediate effects of climate on selection. We examined the fitness consequences of vertebrate grazing and predispersal seed predation, and how these effects varied among years and among individuals within years. Although both antagonistic plant-animal interactions had important negative effects on plant fitness, only grazing intensity was consistently related to plant phenology, being higher in early-flowering individuals. Spring temperature influenced the intensity of both plant-animal interactions, as well as the covariance between seed predation and plant phenology. However, only differences in grazing intensity among years were associated with differences in selection on flowering time; the strength of selection for early flowering being stronger in years with lower mean intensity of grazing. Our results illustrate how climatic conditions can influence plant-animal interactions that are important selective agents for plant traits. A broader implication of our findings is that both ecological and evolutionary responses to climatic changes might be indirect, and largely mediated by species interactions.

Sowing forests: a synthesis of seed dispersal and predation by agoutis and their influence on plant communities

Granivorous rodents have been traditionally regarded as antagonistic seed predators. Agoutis (Dasyprocta spp.), however, have also been recognized as mutualistic dispersers of plants because of their role as scatter-hoarders of seeds, especially for large-seeded species. A closer look shows that such definitions are too simplistic for these Neotropical animals because agoutis can influence plant communities not only through seed dispersal of large seeds but also through predation of small seeds and seedlings, evidencing their dual role. Herein, we summarize the literature on plant-agouti interactions, decompose agouti seed dispersal into its quantitative and qualitative components, and discuss how environmental factors and plant traits determine whether these interactions result in mutualisms or antagonisms. We also look at the role of agoutis in a community context, assessing their effectiveness as substitutes for extinct megafaunal frugivores and comparing their ecological functions to those of other extant dispersers of large seeds. We also discuss how our conclusions can be extended to the single other genus in the Dasyproctidae family (Myoprocta). Finally, we examine agoutis' contribution to carbon stocks and summarize current conservation threats and efforts. We recorded 164 interactions between agoutis and plants, which were widespread across the plant phylogeny, confirming that agoutis are generalist frugivores. Seed mass was a main factor determining seed hoarding probability of plant species and agoutis were found to disperse larger seeds than other large-bodied frugivores. Agoutis positively contributed to carbon storage by preying upon seeds of plants with lower carbon biomass and by dispersing species with higher biomass. This synthesis of plant-agouti interactions shows that ecological services provided by agoutis to plant populations and communities go beyond seed dispersal and predation, and we identify still unanswered questions. We hope to emphasise the importance of agoutis in Neotropical forests.

The last meal of an Eocene pollen-feeding fly

One of the most important trophic interactions today is that between insects and their floral hosts. This biotic association is believed to have been critical to the radiation of flowering plants and many pollinating insect lineages over the last 120 million years (Ma). Trophic interactions among fossil organisms are challenging to study, and most inferences are based on indirect evidence. Fossil records providing direct evidence for pollen feeding, i.e., fossil stomach and gut contents, are exceptionally rare.^1,2 Such records have the potential to provide information on aspects of animal behavior and ecology as well as plant-animal interactions that are sometimes not yet recognized for their extant relatives. The dietary preferences of short-proboscid nemestrinids are unknown, and pollinivory has not been recorded for extant Nemestrinidae.³ We analyzed the contents of the conspicuously swollen abdomen of an ca. 47.5 Ma old nemestrinid fly of the genus Hirmoneura from Messel, Germany, with photogrammetry and state-of-the-art palynological methods. The fly fed on pollen from at least four plant families-Lythraceae, Vitaceae, Sapotaceae, and Oleaceae-and presumably pollinated flowers of two extant genera, Decodon and Parthenocissus. We interpret the feeding and foraging behavior of the fly, reconstruct its preferred habitat, and conclude about its pollination role and importance in paratropical environments. This represents the first evidence that short-proboscid nemestrinid flies fed, and possibly feed to this day, on pollen, demonstrating how fossils can provide vital information on the behavior of insects and their ecological relationships with plants.

Mutualistic and antagonistic interactions differ in wild and domesticated papaya (Carica papaya) in its centre of origin

Shifts in phenotypes derived from the domestication syndromes impact plant performance but may also affect interactions with other species in the community (e.g. mutualists and antagonists). Moreover, plantations often differ from the natural conditions experienced by the wild relatives of cultivated plants, potentially altering the nature of ecological interactions. However, apart from herbivory, little is known about how domestication and cultivation practices (e.g. insecticide application) can modify multiple ecological interactions simultaneously in wild and domesticated plants. In four sites on the Yucatan Peninsula, we compared the diversity of mutualists (e.g. moths) and antagonists (e.g. viruses) in wild and domesticated plants of papaya. For each individual, we recorded floral visitors and rates of visitation at three time periods during the day. We recorded type and percentage of damage by antagonists in three leaves of all individuals. Finally, we explored if plant sex had an effect on the interaction with floral visitors. The main floral visitors were ants and Trigona species, whereas viruses caused the main type of foliar damage. Wild individuals had a higher diversity and visitation rate of floral visitors, and less foliar damage from antagonists. Wild male individuals were more visited, but we observed a similar amount and diversity of damage in both sexes. The time of day did not have an effect on diversity of floral visitors. Together, cultivation practices and domestication appear to have an effect on the reduction in diversity of floral visitors in domesticated papaya, as well as an increase in foliar damage.

Pollinator assemblage and pollen load differences on sympatric diploid and tetraploid cytotypes of the desert-dominant Larrea tridentata

PREMISE

Whole-genome duplication (polyploidy) is an important force shaping flowering-plant evolution. Ploidy-specific plant-pollinator interactions represent important community-level biotic interactions that can lead to nonrandom mating and the persistence of mixed-ploidy populations.

METHODS

At a naturally occurring diploid-tetraploid contact zone of the autopolyploid desert shrub Larrea tridentata, we combined flower phenology analyses, collections of bees on plants of known cytotype, and flow cytometry analyses of bee-collected pollen loads to investigate whether (1) diploid and tetraploid plants have unique bee pollinator assemblages, (2) bee taxa exhibit ploidy-specific visitation and pollen collection biases, and (3) specialist and generalist bee taxa have ploidy-specific visitation and pollen collection biases.

RESULTS

Although bee assemblages overlapped, we found significant differences in bee visitation to co-occurring diploids and tetraploids, with the introduced honeybee (Apis mellifera) and one native species (Andrena species 12) more frequently visiting tetraploids. Consistent with bee assemblage differences, we found that diploid pollen was overrepresented among pollen loads on native bees, while pollen loads on A. mellifera did not deviate from the random expectation. However, mismatches between the ploidy of pollen loads and plants were common, consistent with ongoing intercytotype gene flow.

CONCLUSIONS

Our data are consistent with cytotype-specific bee visitation and suggest that pollinator behavior contributes to reduced diploid-tetraploid mating. Differences in bee visitation and pollen movement potentially contribute to an easing of minority cytotype exclusion and the facilitation of cytotype co-occurrence.

Ecological correlates of species' roles in highly invaded seed dispersal networks

Ecosystems with a mix of native and introduced species are increasing globally as extinction and introduction rates rise, resulting in novel species interactions. While species interactions are highly vulnerable to disturbance, little is known about the roles that introduced species play in novel interaction networks and what processes underlie such roles. Studying one of the most extreme cases of human-modified ecosystems, the island of O'ahu, Hawaii, we show that introduced species there shape the structure of seed dispersal networks to a greater extent than native species. Although both neutral and niche-based processes influenced network structure, niche-based processes played a larger role, despite theory predicting neutral processes to be predominantly important for islands. In fact, ecological correlates of species' roles (morphology, behavior, abundance) were largely similar to those in native-dominated networks. However, the most important ecological correlates varied with spatial scale and trophic level, highlighting the importance of examining these factors separately to unravel processes determining species contributions to network structure. Although introduced species integrate into interaction networks more deeply than previously thought, by examining the mechanistic basis of species' roles we can use traits to identify species that can be removed from (or added to) a system to improve crucial ecosystem functions, such as seed dispersal.

When do Janzen-Connell effects matter? A phylogenetic meta-analysis of conspecific negative distance and density dependence experiments

The Janzen-Connell (J-C) hypothesis suggests that specialised natural enemies cause distance- or density-dependent mortality among host plants and is regarded as an important mechanism for species coexistence. However, there remains debate about whether this phenomenon is widespread and how variation is structured across taxa and life stages. We performed the largest meta-analysis of experimental studies conducted under natural settings to date. We found little evidence of distance-dependent or density-dependent mortality when grouping all types of manipulations. Our analysis also reveals very large variation in response among species, with 38.5% of species even showing positive responses to manipulations. However, we found a strong signal of distance-dependent mortality among seedlings but not seed experiments, which we attribute to (a) seedlings sharing susceptible tissues with adults (leaves, wood, roots), (b) seedling enemies having worse dispersal than seed enemies and (c) seedlings having fewer physical and chemical defences than seeds. Both density- and distance-dependent mortality showed large variation within genera and families, suggesting that J-C effects are not strongly phylogenetically conserved. There were no clear trends with latitude, rainfall or study duration. We conclude that J-C effects may not be as pervasive as widely thought. Understanding the variation in J-C effects provides opportunities for new discoveries that will refine our understanding of J-C effects and its role in species coexistence.

Local and regional variation in effects of burrowing crabs on plant community structure

Burrowing animals can profoundly influence the structure of surrounding communities, as well as the performance of individual species. Changes in the community structure of burrowing animals or plants together with changing abiotic parameters could shift the influence of burrowers on surrounding habitats. For example, prior studies in salt marshes suggest that fiddler crabs stimulate cordgrass production, but leaf-grazing crabs suppress cordgrass production. Unfortunately, testing this prediction and others are impeded because few studies have examined crab impacts on the plant community and across multiple sites, multiple years, or both. This challenges our ability to predict how burrowing animals will influence plant community structure, and when and where these impacts will occur. We manipulated the densities of the dominant burrowing crabs in plant assemblages dominated by Pacific cordgrass (Spartina foliosa) and perennial pickleweed (Sarcocornia pacifica) at three sites in southern California for three years (2016, 2017, 2018). Crab impacts on plant community structure differed among each of our three sites. In contrast to our predictions, (1) leaf-grazing crabs (Pachygrapsus crassipes) had positive effects on cordgrass cover at one site and no effect on cordgrass production at a nearby site in the same marsh and (2) fiddler crabs (Uca crenulata) did not stimulate cordgrass production at another marsh. Because crabs affected traits of cordgrass, but not pickleweed, in the direction consistent with changes in cordgrass cover, we propose that marsh-specific crab effects on community structure were largely mediated through changes in cordgrass, as opposed to pickleweed. Importantly, crabs facilitated cordgrass during marsh-wide cordgrass loss, suggesting that crabs may mitigate environmental stress for this ecologically important plant. Because cordgrass abundance can be a critical measure of marsh functioning and is often a restoration target, we suggest that managing cordgrass populations would benefit from additional information about crab populations and their impacts among years, and among and within marshes.

Vertical stratification of seed-dispersing vertebrate communities and their interactions with plants in tropical forests

Vertical stratification (VS) is a widespread phenomenon in plant and animal communities in forests and a key factor for structuring their species richness and biodiversity, particularly in tropical forests. The organisms composing forest communities adjust and shape the complex three-dimensional structure of their environment and inhabit a large variety of niches along the vertical gradient of the forest. Even though the degree of VS varies among different vertebrate groups, patterns of compositional stratification can be observed across taxa. Communities of birds, bats, primates, and non-flying small mammals are vertically stratified in terms of abundance, species richness, diversity, and community composition. Frugivorous members of these taxa play important roles as seed dispersers and forage on fruit resources that, in turn, vary in quantity and nutritional value along the vertical gradient. As a consequence, plant-seed disperser interaction networks differ among strata, which is manifested in differences in interaction frequencies and the degree of mutual specialization. In general, the canopy stratum is composed of strong links and generalized associations, while the lower strata comprise weaker links and more specialized interactions. Investigating the VS of communities can provide us with a better understanding of species habitat restrictions, resource use, spatial movement, and species interactions. Especially in the face of global change, this knowledge will be important as these characteristics can imply different responses of species and taxa at a fine spatial scale.

Individual specialization in the use of space by frugivorous bats

Natural populations are not homogenous systems but sets of individuals that occupy subsets of the species' niche. This phenomenon is known as individual specialization. Recently, several studies found evidence of individual specialization in animal diets. Diet is a critical dimension of a species' niche that affects several other dimensions, including space use, which has been poorly studied under the light of individual specialization. In this study, which harnesses the framework of the movement ecology paradigm and uses yellow-shouldered bats Sturnira lilium as a model, we ask how food preferences lead individual bats of the same population to forage mainly in different locations and habitats. Ten individual bats were radiotracked in a heterogeneous Brazilian savanna. First, we modelled intraspecific variation in space use as a network of individual bats and the landscape elements visited by them. Second, we developed two novel metrics, the spatial individual specialization index (SpatIS) and the spatial individual complementary specialization index (SpatICS). Additionally, we tested food-plant availability as a driver of interindividual differences in space use. There was large interindividual variation in space use not explained by sex or weight. Our results point to individual specialization in space use in the studied population of S. lilium, most probably linked to food-plant distribution. Individual specialization affects not only which plant species frugivores consume, but also the way they move in space, ultimately with consequences for seed dispersal and landscape connectivity.

Host-plant availability drives the spatiotemporal dynamics of interacting metapopulations across a fragmented landscape

The dynamics of ecological communities depend partly on species interactions within and among trophic levels. Experimental work has demonstrated the impact of species interactions on the species involved, but it remains unclear whether these effects can also be detected in long‐term time series across heterogeneous landscapes. We analyzed a 19‐yr time series of patch occupancy by the Glanville fritillary butterfly Melitaea cinxia, its specialist parasitoid wasp Cotesia melitaearum, and the specialist fungal pathogen Podosphaera plantaginis infecting Plantago lanceolata, a host plant of the Glanville fritillary. These species share a network of more than 4,000 habitat patches in the Åland islands, providing a metacommunity data set of unique spatial and temporal resolution. To assess the influence of interactions among the butterfly, parasitoid, and mildew on metacommunity dynamics, we modeled local colonization and extinction rates of each species while including or excluding the presence of potentially interacting species in the previous year as predictors. The metapopulation dynamics of all focal species varied both along a gradient in host plant abundance, and spatially as indicated by strong effects of local connectivity. Colonization and to a lesser extent extinction rates depended also on the presence of interacting species within patches. However, the directions of most effects differed from expectations based on previous experimental and modeling work, and the inferred influence of species interactions on observed metacommunity dynamics was limited. These results suggest that although local interactions among the butterfly, parasitoid, and mildew occur, their roles in metacommunity spatiotemporal dynamics are relatively weak. Instead, all species respond to variation in plant abundance, which may in turn fluctuate in response to variation in climate, land use, or other environmental factors.

Topographic heterogeneity lengthens the duration of pollinator resources

The availability of sufficient and diverse resources across time is important for maintenance of biodiversity and ecosystem functioning. In this study, we examine the potential for variation in environmental conditions across topographic gradients to extend floral resource timing. Flowering time on a landscape may vary across topography due to differences in abiotic factors, species turnover, or genotypic differences. However, the extent to which this variation in phenology affects overall flowering duration on a landscape, and the components of diversity that influence flowering duration, are unexplored. We investigate whether differences in flowering time due to topography yield an overall extension in duration of flowering resources in a northern California grassland. We recorded flowering time of pollinator resource species across four successive spring growing seasons (2015-2018) on paired north and south aspects. Flowering time differences were evaluated both at the community level and within species present on both paired aspects. The role of plasticity was examined in an experimental case study using genotypes of Lasthenia gracilis. We found that aspect is a strong determinant of phenology, with earlier flowering on warmer south-facing slopes. Aspect differences resulted in complementarity in timing of flowering resources across sites, as aspects that started flowering earlier also ended earlier. Complementarity between north and south aspects served to extend the flowering time of pollinator resources by an average of 4-8 days (8%-15%), depending on the year. This extension can be attributed to both within-species responses to aspect differences and species turnover. Flowering of L. gracilis genotypes was distinct across aspects, demonstrating that plasticity can drive the extension of flowering duration. Our findings indicate that heterogeneous topography can extend overall flowering time of pollinator resources, which may support pollinator biodiversity. Extension was most pronounced at the community level, which incorporates species turnover as well as plastic and genotypic differences within species.

Distinct responses of antagonistic and mutualistic networks to agricultural intensification

Species interaction networks, which govern the maintenance of biodiversity and ecosystem processes within ecological communities, are being rapidly altered by anthropogenic activities worldwide. Studies on the response of species interaction networks to anthropogenic disturbance have almost exclusively focused on one interaction type at a time, such as mutualistic or antagonistic interactions, making it challenging to decipher how networks of different interaction types respond to the same anthropogenic disturbance. Moreover, few studies have simultaneously focused on the two main components of network structure: network topology (i.e., architecture) and network ecology (i.e., species identities and interaction turnover), thereby limiting our understanding of the ecological drivers underlying changes in network topology in response to anthropogenic disturbance. Here, we used 16,400 plant-pollinator and plant-herbivore interaction observations from 16 sites along an agricultural intensification gradient to compare changes in network topology and ecology between mutualistic and antagonistic networks. We measured two aspects of network topology-nestedness and modularity-and found that although the mutualistic networks were consistently more nested than antagonistic networks and antagonistic networks were consistently more modular, the rate of change in nestedness and modularity along the gradient was comparable between the two network types. Change in network ecology, however, was distinct between mutualistic and antagonistic networks, with partner switching making a significantly larger contribution to interaction turnover in the mutualistic networks than in the antagonistic networks, and species turnover being a strong contributor to interaction turnover in the antagonistic networks. The ecological and topological changes we observed in the antagonistic and mutualistic networks have different implications for pollinator and herbivore communities in agricultural landscapes, and support the idea that pollinators are more labile in their interaction partner choice, whereas herbivores form more reciprocally specialized, and therefore more vulnerable, interactions. Our results also demonstrate that studying both topological and ecological network structure can help to elucidate the effects of anthropogenic disturbance on ecological communities, with applications for conservation and restoration of species interactions and the ecosystem processes they maintain.

Herbicides as anthropogenic drivers of eco-evo feedbacks in plant communities at the agro-ecological interface

Herbicides act as human-mediated novel selective agents and community disruptors, yet their full effects on eco-evolutionary dynamics in natural communities have only begun to be appreciated. Here, we synthesize how herbicide exposures can result in dramatic phenotypic and compositional shifts within communities at the agro-ecological interface and how these in turn affect species interactions and drive plant (and plant-associates') evolution in ways that can feedback to continue to affect the ecology and ecosystem functions of these assemblages. We advocate a holistic approach to understanding these dynamics that includes plastic changes and plant community transformations and also extends beyond this single trophic level targeted by herbicides to the effects on nontarget plant-associated organisms and their potential to evolve, thereby embracing the complexity of these real-world systems. We make explicit recommendations for future research to achieve this goal and specifically address impacts of ecology on evolution, evolution on ecology and their feedbacks so that we can gain a more predictive view of the fates of herbicide-impacted communities.

Metabolomic Profiling of Nicotiana Spp. Nectars Indicate That Pollinator Feeding Preference Is a Stronger Determinant Than Plant Phylogenetics in Shaping Nectar Diversity

Floral nectar is a rich secretion produced by the nectary gland and is offered as reward to attract pollinators leading to improved seed set. Nectars are composed of a complex mixture of sugars, amino acids, proteins, vitamins, lipids, organic and inorganic acids. This composition is influenced by several factors, including floral morphology, mechanism of nectar secretion, time of flowering, and visitation by pollinators. The objective of this study was to determine the contributions of flowering time, plant phylogeny, and pollinator selection on nectar composition in Nicotiana. The main classes of nectar metabolites (sugars and amino acids) were quantified using gas chromatography/mass spectrometric analytical platforms to identify differences among fifteen Nicotiana species representing day- and night-flowering plants from ten sections of the genus that are visited by five different primary pollinators. The nectar metabolomes of different Nicotiana species can predict the feeding preferences of the target pollinator(s) of each species, and the nectar sugars (i.e., glucose, fructose, and sucrose) are a distinguishing feature of Nicotiana species phylogeny. Moreover, comparative statistical analysis indicate that pollinators are a stronger determinant of nectar composition than plant phylogeny.

Bioturbation by a reintroduced digging mammal reduces fuel loads in an urban reserve

Digging animals may alter many characteristics of their environment as they disrupt and modify the ground's surface by creating foraging pits or burrows. Extensive disturbance to the soil and litter layer changes litter distribution and availability, potentially altering fuel loads. In many landscapes, including peri-urban areas, fire management to reduce fuel loads is complex and challenging. The reintroduction of previously common digging animals, many of which are now threatened, may have the added benefit of reducing fuel loads. We experimentally examined how the reintroduction of a marsupial bandicoot, quenda (Isoodon fusciventer), altered surface fuel loads in an urban bush reserve in Perth, Western Australia. Foraging activities of quenda (where they dig for subterranean food) were substantial throughout the reserve, creating a visibly patchy distribution in surface litter. Further, in open plots where quenda had access, compared to fenced plots where quenda were excluded, quenda foraging significantly reduced litter cover and litter depth. Similarly, estimated surface fuel loads were nearly halved in open plots where quenda foraged compared to fenced plots where quenda were absent (3.6 cf. 6.4 Mg/ha). Fire behavior modeling, using the estimated surface fuel loads, indicated the predicted rate of spread of fire were significantly lower for open plots where quenda foraged compared to fenced plots under both low (29.2 cf. 51.4 m/h; total fuels) and high (74.3 cf. 130.4 m/h; total fuels) fire conditions. Although many environments require fire, including the bushland where this study occurred, fire management can be a considerable challenge in many landscapes, including urban bushland reserves, which are usually small and close to human infrastructure. The reintroduction of previously common digging species may have potential value as a complimentary tool for reducing fuel loads, and potentially, fire risk.

Frugivory and seed dispersal by chelonians: a review and synthesis

In recent years, it has become clear that frugivory and seed dispersal (FSD) by turtles and tortoises is much more common than previously thought. We here review published and unpublished records of chelonian FSD, and assess the role of chelonians as seed dispersers, from individual species to the community level. We first discuss the distribution of chelonian FSD and the characteristics of the fruit and/or seed species eaten and dispersed by chelonians. We then use the seed dispersal efficiency framework to explore the quantitative and qualitative components of seed dispersal by tortoises and turtles, embarking on a journey from when the fruits and/or seeds are consumed, to when and where they are deposited, and assess how efficient chelonians are as seed dispersers. We finally discuss chelonian FSD in the context of communities and of chelonians as megafauna. A substantial proportion of the world's aquatic and terrestrial turtles and a major part of testudinid tortoises (71 species in 12 families) include fruits and/or seeds in their diet; fruits of at least 588 plant species in 121 families are ingested and/or dispersed by chelonians. For some chelonians, overall or in certain seasons, fruit may even form the largest part of their diet. Contrary to seed dispersal by lizards, the other major reptilian frugivores, chelonian FSD is not an island phenomenon in terms of geographic distribution. Nevertheless, on islands tortoises are often among the largest native terrestrial vertebrates - or were until humans arrived. We synthesise our knowledge of chelonian FSD, and discuss the relevance of our findings for conservation and restoration, especially in relation to rewilding with large and giant tortoises.

Frugivory and seed dispersal by chelonians: a review and synthesis

In recent years, it has become clear that frugivory and seed dispersal (FSD) by turtles and tortoises is much more common than previously thought. We here review published and unpublished records of chelonian FSD, and assess the role of chelonians as seed dispersers, from individual species to the community level. We first discuss the distribution of chelonian FSD and the characteristics of the fruit and/or seed species eaten and dispersed by chelonians. We then use the seed dispersal efficiency framework to explore the quantitative and qualitative components of seed dispersal by tortoises and turtles, embarking on a journey from when the fruits and/or seeds are consumed, to when and where they are deposited, and assess how efficient chelonians are as seed dispersers. We finally discuss chelonian FSD in the context of communities and of chelonians as megafauna. A substantial proportion of the world's aquatic and terrestrial turtles and a major part of testudinid tortoises (71 species in 12 families) include fruits and/or seeds in their diet; fruits of at least 588 plant species in 121 families are ingested and/or dispersed by chelonians. For some chelonians, overall or in certain seasons, fruit may even form the largest part of their diet. Contrary to seed dispersal by lizards, the other major reptilian frugivores, chelonian FSD is not an island phenomenon in terms of geographic distribution. Nevertheless, on islands tortoises are often among the largest native terrestrial vertebrates - or were until humans arrived. We synthesise our knowledge of chelonian FSD, and discuss the relevance of our findings for conservation and restoration, especially in relation to rewilding with large and giant tortoises.

A gradient of pollination specialization in three species of Bolivian Centropogon

PREMISE

Closely related plant species with overlapping ranges often experience competition for pollination services. Such competition can select for divergence in floral traits that attract pollinators or determine pollen placement. While most species in Centropogon (Campanulaceae: Lobelioideae) have flowers that suggest adaptation to bat or hummingbird pollination, actual pollinators are rarely documented, and a few species have a mix of traits from both pollination syndromes. We studied the pollination biology of a "mixed-syndrome" species and its co-occurring congeners to examine the relationship between floral traits and visitation patterns for Centropogon.

METHODS

Fieldwork at two sites in Bolivian cloud forests involved filming floral visitors, quantifying pollen transfer, and measuring floral traits. Stamen exsertion, which determines pollen placement, was measured from herbarium specimens across the geographic range of these species to test for character displacement.

RESULTS

Results show a generalization gradient, from primarily bat pollination in white-flowered Centropogon incanus, to bat pollination with secondary hummingbird pollination in the cream-flowered C. brittonianus, to equal reliance on both pollinators in the red-flowered, mixed-syndrome C. mandonis. Pollen transfer between these species is further reduced by differences in stamen exsertion that are accentuated in zones of sympatry, a pattern consistent with character displacement.

CONCLUSIONS

Our results demonstrate that key differences in floral color and shape mediate a gradient of specialization in Bolivian Centropogon. Interspecific pollen transfer is further reduced by potential character displacement of a key trait. Broadly, our results have implications for understanding the hyper-diversity of Andean cloud forests, in which multiple species of the same genus frequently co-occur.

Competition, seed dispersal and hunting: what drives germination and seedling survival in an Afrotropical forest?

Disentangling the contributions of different processes that influence plant recruitment, such as competition and seed dispersal, is important given the increased human-mediated changes in tropical forest ecosystems. Previous studies have shown that seedling communities in an Afrotropical rainforest in southeastern Nigeria are strongly affected by the loss of important seed-dispersing primates, including Cross River gorillas (Gorilla gorilla diehli), chimpanzee (Pan troglodytes elioti) and drill (Mandrillus leucophaeus). Here we study how germination and survival of tree seedlings are affected by competition and reduced seed dispersal in three contiguous forest reserves, in southeastern Nigeria, with similar mature tree species composition and structure. We use an experimental design aimed at manipulating the effect of competition among seedlings in three protected and three hunted sites within the reserves. We use a total of sixty 5 × 5 m plots of three types: plots cleared of all seedlings, plots selectively cleared of all primate-dispersed seedlings and control plots. All seedlings were identified, measured, assigned to dispersal mode and tagged, and after 1 year we evaluated survival, mortality and new recruits. We found that in hunted sites germination of abiotically dispersed species was over four times higher in cleared plots compared to control plots, whereas germination of primate-dispersed species was the same, which indicated that dispersal limitation was the dominant force in seedling recruitment in hunted sites. This was supported by the fact that the germination of all dispersal modes in the selectively cleared plots in protected sites was similar to the control plots in the same sites, but germination of abiotically dispersed species was significantly lower than in cleared plots in hunted sites. Competition among seedlings was mostly evident from the fact that 75 % more seedlings of primate-dispersed species germinated in cleared compared to control plots in protected sites. We conclude that inter-seedling competition may be irrelevant to seedling recruitment in hunted sites, where dispersal limitation appears to be a much stronger force shaping the seedling plant community, and thus hunting indirectly reverses the importance of competition and dispersal limitation in structuring seedling communities.

The influence of logging on vertebrate responses to mast fruiting

Periods of extreme food abundance, such as irregular masting events, can dramatically affect animal populations and communities, but the extent to which anthropogenic disturbances alter animal responses to mast events is not clear. In South-East Asia, dipterocarp trees reproduce in mast fruiting events every 2-10 years in some of the largest masting events on the planet. These trees, however, are targeted for selective logging, reducing the intensity of fruit production and potentially affecting multiple trophic levels. Moreover, animal responses to resource pulse events have largely been studied in systems where the major mast consumers have been extirpated. We sought to evaluate the influence of human-induced habitat disturbance on animal responses to masting in a system where key mast consumers remain extant. We used motion-triggered camera traps to quantify terrestrial mammal and bird occurrences in Sabah, Malaysian Borneo, relative to variation in fruit biomass from 69 plant families during a major (2014) and minor (2015) masting event and a non-mast year (2013), in both logged and unlogged forests. Bearded pigs (Sus barbatus) showed the clearest responses to masting and occurrence rates were highest in unlogged forest in the year following the major mast, suggesting that the pulse in fruit availability increased immigration or reproduction. We also detected local-scale spatial tracking of dipterocarp fruits in bearded pigs in unlogged forest, while this was equivocal in other species. In contrast, pigs and other vertebrate taxa in our study showed limited response to spatial or temporal variation in fruit availability in logged forest. Our findings suggest that vertebrates, namely bearded pigs, may respond to masting via movement and increased reproduction, but that these responses may be attenuated by habitat disturbance.

The influence of spatial sampling scales on ant-plant interaction network architecture

Despite great interest in metrics to quantify the structure of ecological networks, the effects of sampling and scale remain poorly understood. In fact, one of the most challenging issues in ecology is how to define suitable scales (i.e., temporal or spatial) to accurately describe and understand ecological systems. Here, we sampled a series of ant-plant interaction networks in the southern Brazilian Amazon rainforest in order to determine whether the spatial sampling scale, from local to regional, affects our understanding of the structure of these networks. To this end, we recorded ant-plant interactions in adjacent 25 × 30 m subplots (local sampling scale) nested within twelve 250 × 30 m plots (regional sampling scale). Moreover, we combined adjacent or random subplots and plots in order to increase the spatial sampling scales at the local and regional levels. We then calculated commonly used binary and quantitative network-level metrics for both sampling scales (i.e., number of species and interactions, nestedness, specialization and modularity), all of which encompass a wide array of structural patterns in interaction networks. We observed increasing species and interactions across sampling scales, and while most network descriptors remained relatively constant at the local level, there was more variation at the regional scale. Among all metrics, specialization was most constant across different spatial sampling scales. Furthermore, we observed that adjacent assembly did not generate more variation in network descriptor values compared to random assembly. This finding indicates that the spatially aggregated distribution of species/individuals and abiotic conditions does not affect the organization of these interacting assemblages. Our results have a direct impact on our empirical and theoretical understanding of the ecological dynamics of species interactions by demonstrating that small spatial sampling scales should suffice to record some patterns commonly found in ant-plant interaction networks in a highly diverse tropical rainforest.

Effects of howler monkey reintroduction on ecological interactions and processes

Rewilding has been an increasingly popular tool to restore plant-animal interactions and ecological processes impaired by defaunation. However, the reestablishment of such processes has seldom been assessed. We investigated the restoration of ecological interactions following the reintroduction of the brown howler monkey (Alouatta guariba) to a defaunated Atlantic forest site. We expected the reintroduction to restore plant-animal interactions and interactions between howlers and dung beetles, which promote secondary seed dispersal. We estimated the number of interactions expected to be restored by the reintroduction to provide the baseline interaction richness that could be restored. We followed the reintroduced howler monkeys twice a week for 24 months (337 hours total) to assess their diet. We used howler monkey dung in secondary seed dispersal experiments with 2484 seed mimics to estimate the removal rates by dung beetles and collected the beetles to assess community attributes. We compared the potential future contribution of howler monkeys and other frugivores to seed dispersal based on the seed sizes they disperse in other areas where they occur. In 2 years, howler monkeys consumed 60 animal-dispersed plant species out of the 330 estimated. Twenty-one dung beetle species were attracted to experimentally provided dung; most of them were tunnelers, nocturnal, and large-sized (>10 mm). On average 30% (range 0-100%) of the large seed mimics (14 mm) were moved by dung beetles. About 91% of the species consumed by howlers (size range 0.3-34.3 mm) overlapped in seed size with those removed by dung beetles. In our study area, howler monkeys may consume more large-seeded fruit species than most other frugivores, highlighting their potential to affect forest regeneration. Our results show reintroductions may effectively restore ecological links and enhance ecological processes.

The role of plant epigenetics in biotic interactions

Contents Summary 731 I. Biotic interactions in the context of genetic, epigenetic and environmental diversity 731 II. Biotic interactions affect epigenetic configuration 732 III. Plant epigenetic configuration influences biotic interactions 733 IV. Epigenetic memory in the context of biotic interactions 734 V. Conclusions and future research 735 Acknowledgements 735 Author contributions 735 References 735 SUMMARY: Plants are hubs of a wide range of biotic interactions with mutualist and antagonist animals, microbes and neighboring plants. Because the quality and intensity of those relationships can change over time, a fast and reversible response to stress is required. Here, we review recent studies on the role of epigenetic factors such as DNA methylation and histone modifications in modulating plant biotic interactions, and discuss the state of knowledge regarding their potential role in memory and priming. Moreover, we provide an overview of strategies to investigate the contribution of epigenetics to environmentally induced phenotypic changes in an ecological context, highlighting possible transitions from whole-genome high-resolution analyses in plant model organisms to informative reduced representation analyses in genomically less accessible species.

Effects of temporal variation in community-level fruit abundance on seed dispersal by birds across woody species

PREMISE OF THE STUDY

In animal-dispersed plants, seed dispersal patterns of the same species in the same habitat can greatly differ among individuals and temporally. Many studies have revealed the pervasive effects of spatial variation in fruit abundance on seed dispersal of individual plants. By contrast, very few studies have investigated the temporal variation in seed dispersal.

METHODS

We investigated the effects of conspecific and community-level fruit abundance on fruit removal rate and seed dispersal distance of six bird-dispersed woody species in a Japanese temperate forest for 3 yr. The six species share similar fruit characteristics but have different fruiting seasons. In addition, we also considered the effects of bird seasonality in diet and species composition on seed dispersal.

KEY RESULTS

Inter-annual and inter-seasonal variation in community-level fruit abundance determined both fruit removal and the seed dispersal distance across species, but the effect differed with seasonal changes in bird behavior. Abundant fruit satiated fruit removal by birds only during fruit-feeding periods, not during insect-feeding periods. A scarcity of fruit increased the dispersal distance, but only during the migratory period. This difference was probably due to the different foraging behaviors of passing migrants and territorial birds.

CONCLUSIONS

Our results illustrated that temporal variation in community-level fruit abundance could be a determining factor for seed dispersal in temperate forests. The effects of temporal variations in fruit abundance on seed dispersal patterns should be investigated in other ecosystems in order to understand their importance and associations with frugivore phenology.

Caterpillar seed predators mediate shifts in selection on flowering phenology in their host plant

Variation in selection among populations and years has important implications for evolutionary trajectories of populations. Yet, the agents of selection causing this variation have rarely been identified. Selection on the time of reproduction within a season in plants might differ both among populations and among years, and selection can be mediated by both mutualists and antagonists. We investigated if differences in the direction of phenotypic selection on flowering phenology among 20 populations of Gentiana pneumonanthe during 2 yr were related to the presence of the butterfly seed predator Phengaris alcon, and if butterfly incidence was associated with the abundance of the butterfly's second host, Myrmica ants. In plant populations without the butterfly, phenotypic selection favored earlier flowering. In populations where the butterfly was present, caterpillars preferentially attacked early-flowering individuals, shifting the direction of selection to favoring later flowering. Butterfly incidence in plant populations increased with ant abundance. Our results demonstrate that antagonistic interactions can shift the direction of selection on flowering phenology, and suggest that such shifts might be associated with differences in the community context.

Phenotypic trait matching predicts the topology of an insular plant-bird pollination network

Conceptualizing species interactions as networks has broadened our understanding of ecological communities. However, the factors shaping interaction patterns among species and, therefore, network structure remain unclear. One potentially important factor is the matching of phenotypic traits. Here, we tested for trait matching in a bird-flower visitation network from New Zealand. We first quantified the overall network structure and tested whether flower size could account for differences in the visitation rates of flowering plants. We then explored the relationship between the flower size and bill size. The results showed that the interaction network is nested. Plant species with large flowers received more visits from birds than plant species with small flowers. Moreover, plant species with large flowers were visited more frequently by birds with large bills, while species with smaller flowers were visited more frequently by birds with small bills. Overall, the interaction patterns between birds and flowering plants could be predicted by their morphology, suggesting that phenotypic trait matching is an important predictor of network structure.

Müllerian and Batesian mimicry out, Darwinian and Wallacian mimicry in, for rewarding/rewardless flowers

Müllerian and Batesian mimicry were originally defined in defensive (anti-predetory) animal systems. Later these terms were adopted by botanists studying pollination that defined rewarding flowers as Müllerian mimics and rewardless flowers as Batesian mimics. The use of these terms concerning pollination predated our recent understanding of how common plant aposematism is and the related defensive Müllerian and Batesian mimicry types. Being non-defensive, using the terms Müllerian and Batesian mimicry for rewarding/rewardless flowers is, however, confusing if not misleading, and is also logically inappropriate. I suggest to first stop using the terms Batesian and Müllerian mimicry concerning rewarding/rewardless flowers and pollination, and second, to define the guild of flowers that reward pollinatiors as Darwinian mimics and those that do not reward pollinators as Wallacian mimics.

Effects of chronic anthropogenic disturbance and rainfall on the specialization of ant-plant mutualistic networks in the Caatinga, a Brazilian dry forest

Anthropogenic disturbance and climate change might negatively affect the ecosystem services provided by mutualistic networks. However, the effects of such forces remain poorly characterized. They may be especially important in dry forests, which (1) experience chronic anthropogenic disturbances (CADs) as human populations exploit forest resources, and (2) are predicted to face a 22% decline in rainfall under climate change. In this study, we investigated the separate and combined effects of CADs and rainfall levels on the specialization of mutualistic networks in the Caatinga, a seasonally dry tropical forest typical of north-eastern Brazil. More specifically, we examined interactions between plants bearing extrafloral nectaries (EFNs) and ants. We analysed whether differences in network specialization could arise from environmentally mediated variation in the species composition, namely via the replacement of specialist by generalist species. We characterized these ant-plant networks in 15 plots (20 × 20 m) that varied in CAD intensity and mean annual rainfall. We quantified CAD intensity by calculating three indices related to the main sources of disturbance in the Caatinga: livestock grazing (LG), wood extraction (WE) and miscellaneous resource use (MU). We determined the degree of ant-plant network specialization using four metrics: generality, vulnerability, interaction evenness and H₂ '. Our results indicate that CADs differentially influenced network specialization: we observed positive, negative, and neutral responses along LG, MU and WE gradients, respectively. The pattern was most pronounced with LG. Rainfall also shaped network specialization, markedly increasing it. While LG and rainfall were associated with changes in network species composition, this trend was not related to the degree of species specialization. This result suggests that shifts in network specialization might be related to changes in species behaviour, not species composition. Our study highlights the vulnerability of such dry forest ant-plant networks to climate change. Moreover, dry forests experience highly heterogeneous anthropogenic disturbances, creating a geographic mosaic of selective forces that may shape the co-evolution of interactions between ants and EFN-bearing plants.

Wildlife species benefitting from a greener Arctic are most sensitive to shrub cover at leading range edges

Widespread expansion of shrubs is occurring across the Arctic. Shrub expansion will substantially alter arctic wildlife habitats. Identifying which wildlife species are most affected by shrubification is central to predicting future arctic community composition. Through meta-analysis, we synthesized the published evidence for effects of canopy-forming shrubs on birds and mammals in the Arctic and Subarctic. We examined variation in species behaviour, distribution and population dynamics in birds and mammals in response to shrub cover (including shrub cover indicators such as shrub occurrence, extent, density and height). We also assessed the degree of heterogeneity in wildlife responses to shrub cover and synthesized the remaining literature that did not fit the criteria for our quantitative meta-analyses. Species from higher green vegetation biomass habitats (high Normalized Difference Vegetation Index, NDVI, across their distribution) were more likely to respond positively to shrub cover, demonstrating the potential for species to expand from boreal to arctic habitats under shrubification. Wildlife populations located in the lowest vegetation biomass (low NDVI) areas of their species' range had the greatest proportion of positive responses to shrub cover, highlighting how increases in performance at leading edges of invaders distributions may be particularly rapid. This demonstrates the need to study species at these leading edges to accurately predict expansion potential. Arctic specialists were poorly represented across studies (limited to 5 bird and 0 mammal species), this knowledge gap potentially explains the few reported negative effects of shrub cover (3 of 29 species). Species responses to shrub cover showed substantial heterogeneity and varied among sites and years in all studies with sufficient replication to detect such variation. Our study highlights the importance of responses at species range edges in determining outcomes of shrubification for arctic birds and mammals and the need for greater examination of potential wildlife losers under shrubification.

Deciphering the effects of disperser assemblages and seed mass on patterns of seed dispersal in a rodent community

The sizes of both seed dispersers and seeds are traits that are likely to interact to influence seed fate in many synzoochoric plant species. Here, we examined whether members of a granivorous rodent community consisting of species of different body size vary in their effectiveness as seed dispersers, and how this relationship may be altered by seed size. We marked northern red oak (Quercus rubra) acorns with plastic tags and placed them in size-selective rodent exclosures. The exclosures allowed differential access of rodent groups based on different body size: (i) small (e.g. Peromyscus spp.); (ii) small and medium (e.g. Tamias striatus); and (iii) small, medium and large (e.g. Sciurus carolinensis) species of rodents. Acorn removal did not differ among exclosure types, but more seeds were missing when removed by small rodents, probably because of larderhoarding. The treatments did not influence the relative frequency of acorn consumption. However, small rodents cached considerably fewer and partially ate more acorns than the other 2 groups. The mean dispersal distance was the longest for cages with medium openings, intermediate for cages with large openings and the shortest for cages with small openings. Acorn mass positively affected the probability of caching and this relationship was unaffected by exclosure type. In conclusion, granivorous rodents of different body sizes strongly differed in their interactions with acorns, with small rodents acting primarily as acorn predators and medium and large species contributing significantly more to dispersal of red oaks.

Effects of zoochory on the spatial genetic structure of plant populations

Spatial genetic structure (SGS) of plants results from the nonrandom distribution of related individuals. SGS provides information on gene flow and spatial patterns of genetic diversity within populations. Seed dispersal creates the spatial template for plant distribution. Thus, in zoochorous plants, dispersal mode and disperser behaviour might have a strong impact on SGS. However, many studies only report the taxonomic group of seed dispersers, without further details. The recent increase in studies on SGS provides the opportunity to review findings and test for the influence of dispersal mode, taxonomic affiliation of dispersers and their behaviour. We compared the proportions of studies with SGS among groups and tested for differences in strength of SGS using Sp statistics. The presence of SGS differed among taxonomic groups, with reduced presence in plants dispersed by birds. Strength of SGS was instead significantly influenced by the behaviour of seed dispersal vectors, with higher SGS in plant species dispersed by animals with behavioural traits that result in short seed dispersal distances. We observed high variance in the strength of SGS in plants dispersed by animals that actively or passively accumulate seeds. Additionally, we found SGS was also affected by pollination and marker type used. Our study highlights the importance of vector behaviour on SGS even in the presence of variance created by other factors. Thus, more detailed information on the behaviour of seed dispersers would contribute to better understand which factors shape the spatial scale of gene flow in animal-dispersed plant species.

Indirect effects of ecosystem engineering combine with consumer behaviour to determine the spatial distribution of herbivory

Ecosystem engineers alter environments by creating, modifying or destroying habitats. The indirect impacts of ecosystem engineering on trophic interactions should depend on the combination of the spatial distribution of engineered structures and the foraging behaviour of consumers that use these structures as refuges. In this study, we assessed the indirect effects of ecosystem engineering by a wood-boring beetle in a neotropical mangrove forest system. We identified herbivory patterns in a dwarf mangrove forest on the archipelago of Twin Cays, Belize. Past wood-boring activity impacted more than one-third of trees through the creation of tree holes that are now used, presumably as predation or thermal refuge, by the herbivorous mangrove tree crab Aratus pisonii. The presence of these refuges had a significant impact on plant-animal interactions; herbivory was more than fivefold higher on trees influenced by tree holes relative to those that were completely isolated from these refuges. Additionally, herbivory decreased exponentially with increasing distance from tree holes. We use individual-based simulation modelling to demonstrate that the creation of these herbivory patterns depends on a combination of the use of engineered tree holes for refuge by tree crabs, and the use of two behaviour patterns in this species-site fidelity to a "home tree," and more frequent foraging near their home tree. We demonstrate that understanding the spatial distribution of herbivory in this system depends on combining both the use of ecosystem engineering structures with individual behavioural patterns of herbivores.

The timing of leaf damage affects future herbivory in mountain sagebrush (Artemisia tridentata)

Many plants respond to herbivory by increasing expression of defensive traits. The defensive response of plants can vary depending on plant condition, seasonality, and time of day. Due to a lack of field-based studies, it is unclear how temporal variability in defensive response may alter future rates of herbivory within ecological communities. In a series of simulated herbivory experiments, I quantified how the timing of leaf damage in mountain sagebrush (Artemisia tridentata ssp. vaseyana) affects future herbivory. An identical leaf damage treatment was applied across 12 time windows to test how the effectiveness of response to herbivore damage changes along three interacting temporal scales: diel, seasonal, and annual. In contrast to several studies demonstrating induced resistance to herbivory in sagebrush, prevention of future herbivory was only detected following summer afternoon leaf damage in one of three years. These findings suggest that the timing of experimental leaf damage is one of many factors contributing to variability in field-based plant defensive induction studies.

VARIABLE SELECTION ON EUROSTA'S GALL SIZE, I: THE EXTENT AND NATURE OF VARIATION IN PHENOTYPIC SELECTION

Natural fluctuations in environmental conditions are likely to induce variation in the intensity or direction of natural selection. A long-term study of the insect, Eurosta solidaginins Fitch (Diptera; Tephritidae), which induces stem galls on the perennial herb Solidago altissima (Asteraceae) was performed to explore the patterns of variation in phenotypic selection. The intensity of selection imposed by parasitoids and predators on gallmaking larvae, for gall size, was measured across 16 populations over the course of 4 generations, for a total of 64 population-generations. Directional selection was quantified by i, the selection intensity, and variance selection by j', a measure of the intensity of selection on phenotypic variance. Size-dependent attack by parasitoids caused upward directional selection (mean i_p = 0.42; SE = 0.023), while size-dependent bird attack favored larvae that induced smaller galls (mean i_b = -0.07; SE = 0.013. The mean net directional selection intensity was 0.35 (SE = 0.030), which indicates that insects inducing larger galls are generally favored by selection. The opposing patterns of size-dependent attack resulted in stabilizing selection in half the population generations, with an overall average. j' of -0.11 (SE = 0.078). The magnitude of directional selection was strongly influenced by the population mean gall size and weakly by the optimal gall size. The intensity of variance selection was strongly influenced by the shape of the fitness function, with sigmoidal and Gaussian-like shapes causing greater depletion of phenotypic variance.