The dilemma of foraging herbivores: dealing with food and fear

Seasonal indices of nutrition and stress in a northern population of snowshoe hares

Cyclic changes in snowshoe hare (Lepus americanus) fecundity have been attributed to changes in winter forage availability and predation pressure. Disentangling how nutrition and predation pressure affect snowshoe hare physiology is complex. As an herbivore of the northern boreal forests, snowshoe hares cope with extreme seasonal changes in diet, ambient temperature, and energy demands. We examined seasonal variation in the body condition index, blood biomarkers indicative of nutritional status, and fecal cortisol metabolite concentrations, in snowshoe hares across five ecologically distinct times of year in relation to adult survival rates. Snowshoe hares sampled from a high-density population in northern Alaska during 2018 showed decreases in survival and in plasma concentrations of total protein (TP), blood urea nitrogen (BUN), hematocrit (Hct), Chloride (Cl) and glucose during March and October. Increased survival and concentrations of Cl, TP, BUN, Hct, sodium (Na) and glucose were observed during August. Decreases in mass and survival from August to October suggest limited forage. Increases in TP, BUN, Hct and glucose in December suggest higher metabolic turnover. Fecal cortisol concentrations were not significantly associated with seasonal nutritional condition. A two-fold increase in mean cortisol was observed during August, potentially associated with energetically costly processes such as increased movement and reproduction. This work provides seasonal observations of snowshoe hare plasma biochemical values (N = 164) indicative of nutritional status, and supports the idea of using a collective biomarker approach to advance our understanding of how seasonality may play a role in snowshoe hare physiology.

Integrating physiology into movement ecology of large terrestrial mammals

Movement paths are influenced by external factors and depend on an individual's navigation capacity (Where to move?), motion capacity (How to move?) and are ultimately driven by internal physiological state (Why move?). Despite physiology underlying most aspects of this movement ecology framework, the physiology-movement nexus remains understudied in large terrestrial mammals. Within this Commentary, we highlight the physiological processes that underpin the movement ecology framework and how integrating physiological measurements can provide mechanistic insights that may enhance our understanding of the drivers of animal movement. We focus on large terrestrial mammals, which are well represented within the movement ecology literature but are under-represented in movement studies that integrate physiological state. Recent advances in biologging technology allow for physiological variables, such as heart rate and body movements, to be recorded remotely and continuously in free-living animals. Biologging of body temperature may provide additional insights into the physiological states driving movement. Body temperature not only provides a measure of thermal stress, but also an index of animal wellbeing through quantification of nutrition, hydration, reproductive and disease states that may drive animal movements. Integrating measures of body temperature with fine-scale GPS locations may provide insights into causality and improve our mechanistic understanding of animal movement, which is crucial for understanding population performance and monitoring reintroduction success. We recommend that baseline studies are undertaken, linking animal movement to the underlying physiological mechanisms, to allow for the development of realistic predictive models to improve conservation efforts in the Anthropocene.

How often are ecosystems top-down controlled? Experiments in grassland, grasshopper, and bird systems over time and space

Ecosystems are frequently considered to be controlled by predation (top-down). Experiments examined this in four bird/spider/grasshopper/prairie habitats over 34 years, employing in each habitat three 100 m2 bird exclosures and controls (121 habitat/year cases) where plant, grasshopper, and spider abundances were measured. Top-down control (plants decrease and grasshoppers increase with bird exclusion) was observed in only 13.2% of cases, while plants increased and grasshoppers decreased in 33.1% of cases, plants decreased and grasshoppers decreased in 25.6% of cases, and plants increased and grasshoppers increased in 28.1% of cases. Therefore, top-down control was not common and system responses were not constant, but varied among sites, years, and directionally over time with climate change. This diversity of responses is expected given the variety of underlying processes in complex ecosystems. For example, decision tree/discriminant analysis found that plant decreases and increases with bird exclusion were correctly identified in 78.3% of cases by grasshopper hatchling abundance, plant cover, and annual net primary production (ANPP), while grasshopper decreases and increases with bird exclusion were correctly identified in 76.7% of cases by edible plant biomass per grasshopper hatchling, grasshopper hatchling abundance, and large grasshopper abundance. Analysis of other system-wide terrestrial trophic experiments indicates that the variety of responses observed by us over time and space may be common so that system-wide trophic responses may, in general, be more variable than either top-down or bottom-up as often considered.

Predation risk and floral rewards: How pollinators balance these conflicts and the consequences on plant fitness

Foraging behavior of pollinators is shaped by, among other factors, the conflict between maximizing resource intake and minimizing predation risk; yet, empirical studies quantifying variation in both forces are rare, compared to those investigating each separately. Here, we discuss the importance of simultaneously assessing bottom-up and top-down forces in the study of plant-pollinator interactions, and propose a conceptual and testable graphical hypothesis for pollinator foraging behavior and plant fitness outcomes as a function of varying floral rewards and predation risk. In low predation risk scenarios, no noticeable changes in pollinator foraging behavior are expected, with reward levels affecting only the activity threshold. However, as predation risk increases we propose that there is a decrease in foraging behavior, with a steeper decline as plants are more rewarding and profitable. Lastly, in high predation risk scenarios, we expect foraging to approach zero, regardless of floral rewards. Thus, we propose that pollinator foraging behavior follows an inverse S-shape curve, with more pronounced changes in foraging activity at intermediate levels of predation risk, especially in high reward systems. We present empirical evidence that is consistent with this hypothesis. In terms of the consequences for plant fitness, we propose that specialized plant-pollinator systems should be more vulnerable to increased predation risk, with a steeper and faster decline in plant fitness, compared with generalist systems, in which pollinator redundancy can delay or buffer the effect of predators. Moreover, whereas we expect that specialist systems follows a similar inverse S-shape curve, in generalist systems we propose three different scenarios as a function not only of reward level but also compatibility, mating-system, and the interplay between growth form and floral display. The incorporation of trade-offs in pollinator behavior balancing the conflicting demands between feeding and predation risk has a promising future as a key feature enabling the development of more complex foraging models.

Dietary tannins alter growth, behavior, and the gut microbiome of larval amphibians

Research has shown that leached plant toxins negatively impact the growth and development of larval amphibians. However, tadpoles may encounter these same toxins in food material, and differential exposure routes and distribution of toxic chemicals can yield variable downstream effects on animals. To date, most research understanding the interactions between dietary plant toxins and herbivores has been conducted in terrestrial systems. Despite the abundance of plant toxins in food and water sources, the effects of dietary plant toxins on larval amphibians have not been studied, and tannins could negatively affect these species. Here, green frog tadpoles (Lithobates clamitans) were fed diets with or without 2% tannic acid to test how their growth, development, behavior, and gut microbiome respond to dietary tannins. At the end of the trial, we conducted a behavioral assay to measure tadpole activity and boldness and inventoried the gut microbiome using 16S rRNA sequencing. Dietary tannins significantly decreased body mass by 66% and length by 28%, without influencing tadpole developmental stage. We found significant differences in exploratory behavior and boldness during the first minute of our behavioral assay, demonstrating that tannins have the potential to influence behavior during novel or stressful events. Finally, tannins significantly sculpted the gut microbiome, with an increase in the measurement of Shannon entropy. We observed 7 microbial phyla and 153 microbial genera that exhibited significantly differential abundances differences between control and tannic acid-fed tadpoles. Collectively, our results demonstrate that dietary tannins have the potential to alter amphibian growth, behavior, and microbiome.

Niche overlap across landscape variability in summer between two large herbivores using eDNA metabarcoding

Understanding the relationship between a species feeding strategy and its environment (trophic ecology) is critical to assess environmental requirements and improve management policies. However, measuring trophic interactions remains challenging. Among the available methods, quantifying the plant composition of a species' diet indicates how species use their environment and their associated niche overlap. Nevertheless, most studies focusing on herbivore trophic ecology ignore the influence that landscape variability may have. Here, we explored how landscape variability influences diet composition through niche overlap. We used eDNA metabarcoding to quantify the diet composition of two large herbivores of the Bialowieza Forest, red deer (Cervus elaphus) and European bison (Bison bonasus) to investigate how increasing habitat quality (i.e. higher abundance of deciduous forage species) and predation risk (i.e. density of wolf in the area) influence their diet composition and niche partitioning. Our findings indicate diet composition is non-homogeneous across the landscape, both within and between species. Red deer showed greater diet variability and lower niche overlap within species compared to bison. We detected a reduction of niche overlap for red deer with increasing predation risk, leading to more dissimilar diets, suggesting their feeding behaviour is affected by wolf presence. This correlation was not found for bison, which are rarely predated by wolf. Higher habitat quality was associated with higher niche overlap only within bison, probably due to their suboptimal feeding strategy as browsers. These results show the importance of integrating environment-induced diet variation in studies aimed at determining the landscape usage or niche overlap of a species.

Landscape use by large grazers in a grassland is restructured by wildfire

Animals navigate landscapes based on perceived risks vs. rewards, as inferred from features of the landscape. In the wild, knowing how strongly animal movement is directed by landscape features is difficult to ascertain but widespread disturbances such as wildfires can serve as natural experiments. We tested the hypothesis that wildfires homogenize the risk/reward landscape, causing movement to become less directed, given that fires reduce landscape complexity as habitat structures (e.g., tree cover, dense brush) are burned. We used satellite imagery of a research reserve in Northern California to count and categorize paths made primarily by mule deer (Odocoileus hemionus) in grasslands. Specifically, we compared pre-wildfire (August 2014) and post-wildfire (September 2018) image history layers among locations that were or were not impacted by wildfire (i.e., a Before/After Control/Impact design). Wildfire significantly altered spatial patterns of deer movement: more new paths were gained and more old paths were lost in areas of the reserve that were impacted by wildfire; movement patterns became less directed in response to fire, suggesting that the risk/reward landscape became more homogenous, as hypothesized. We found evidence to suggest that wildfire affects deer populations at spatial scales beyond their scale of direct impact and raises the interesting possibility that deer perceive risks and rewards at different spatial scales. In conclusion, our study provides an example of how animals integrate spatial information from the environment to make movement decisions, setting the stage for future work on the broader ecological implications for populations, communities, and ecosystems, an emerging interest in ecology.

Small rodent population cycles and plants - after 70 years, where do we go?

Small rodent population cycles characterise northern ecosystems, and the cause of these cycles has been a long-lasting central topic in ecology, with trophic interactions currently considered the most plausible cause. While some researchers have rejected plant-herbivore interactions as a cause of rodent cycles, others have continued to research their potential roles. Here, we present an overview of whether plants can cause rodent population cycles, dividing this idea into four different hypotheses with different pathways of plant impacts and related assumptions. Our systematic review of the existing literature identified 238 studies from 150 publications. This evidence base covered studies from the temperate biome to the tundra, but the studies were scattered across study systems and only a few specific topics were addressed in a replicated manner. Quantitative effects of rodents on vegetation was the best studied topic, and our evidence base suggests such that such effects may be most pronounced in winter. However, the regrowth of vegetation appears to take place too rapidly to maintain low rodent population densities over several years. The lack of studies prevented assessment of time lags in the qualitative responses of vegetation to rodent herbivory. We conclude that the literature is currently insufficient to discard with confidence any of the four potential hypotheses for plant-rodent cycles discussed herein. While new methods allow analyses of plant quality across more herbivore-relevant spatial scales than previously possible, we argue that the best way forward to rejecting any of the rodent-plant hypotheses is testing specific predictions of dietary variation. Indeed, all identified hypotheses make explicit assumptions on how rodent diet taxonomic composition and quality will change across the cycle. Passing this bottleneck could help pinpoint where, when, and how plant-herbivore interactions have - or do not have - plausible effects on rodent population dynamics.

Nutritional needs and mortality risk combine to shape foraging decisions in ants

When foraging, internal needs for particular nutrients might affect food choice, and external constraints, such as predation risk, might impact trade-offs between foraging and risk avoidance. Examining both internal and external constraints simultaneously can provide important insights into how animals make decisions. We examined how internal nutritional needs and external cues of mortality risk jointly impact the foraging behavior of ants. Ant colonies require carbohydrates to support workers energetically and proteins to raise brood. Furthermore, colonies adjust their foraging activity in response to the environment, such as food availability and the presence of predators or heterospecifics. Here we examine the foraging decisions of groups of Argentine ants Linepithema humile, which differ in their nutritional needs in high-risk environments. We starved groups of ants for either proteins or carbohydrates and determined the foraging choices that ants made when cues of heterospecifics were present. We found that ants preferentially forage for carbohydrates in high-risk conditions. Furthermore, starvation for carbohydrates increased the ants' preference for carbohydrates, even when cues of heterospecifics were present at both carbohydrates and protein resources. Starvation for protein also resulted in preferential foraging for carbohydrates, but it increased visitation to a protein food source in high-risk environments compared to when ants were starved for carbohydrates or for both resources. Examining the effect of both nutrition and mortality risk on foraging simultaneously provides insights about state-dependent risk-taking behavior that may have important implications for predicting the invasion of species into novel habitats.

Traces of dietary patterns in saliva of hominids: Profiling salivary amino acid fingerprints in great apes and humans

Herbivorous animals that regularly consume tannin-rich food are known to secrete certain tannin-binding salivary proteins (TBSPs), especially proline-rich proteins and histidine-rich proteins, as an effective measure to counteract the antinutritive effects of dietary tannins. Due to their high binding capacity, TBSPs complex with tannins in the oral cavity, and thereby protect dietary proteins and digestive enzymes. Although the natural diet of great apes (Hominidae) is biased toward ripe fruits, analyses of food plants revealed that their natural diet contains considerable amounts of tannins, which is raising the question of possible counter-measures to cope with dietary tannins. In our study, we investigated the salivary amino acid profiles of zoo-housed Pan paniscus, Pan troglodytes, Gorilla gorilla, and Pongo abelii, and compared their results with corresponding data from Homo sapiens. Individual saliva samples of 42 apes and 17 humans were collected and quantitated by amino acid analysis, using cation-exchange chromatography with postcolumn derivatization, following acid hydrolysis. We found species-specific differences in the salivary amino acid profiles with average total salivary protein concentration ranging from 308.8 mg/dL in Po. abelii to 1165.6 mg/dL in G. gorilla. Total salivary protein was consistently higher in ape than in human saliva samples (174 mg/dL). All apes had on average also higher relative proline levels than humans did. Histidine levels had the highest concentration in the samples from Po. abelii followed by P. paniscus. In all ape species, the high salivary concentrations of proline and histidine are considered to be indicative of high concentrations of TBSPs in hominids. Given that the species differences in salivary composition obtained in this study correspond with overall patterns of secondary compound content in the diet of wild populations, we assume that salivary composition is resilient to acute and long-lasting changes in diet composition in general and tannin content in particular.

Refining the stress gradient hypothesis for mixed species groups of African mammals

Species interactions such as facilitation and predation influence food webs, yet it is unclear how they are mediated by environmental gradients. Here we test the stress gradient hypothesis which predicts that positive species interactions increase with stress. Drawing upon spatially-explicit data of large mammals in an African savanna, we tested how predation risk and primary productivity mediate the occurrence of mixed species groups. Controlling for habitat structure, predation risk by lions and primary productivity affected the frequency of mixed species groups in species-specific ways, likely reflecting distinct stress perceptions. To test whether mixed species groups indicate positive interactions, we conducted network analyses for specific scenarios. Under predation risk, dyadic associations with giraffes were more pronounced and metrics of animal networks changed markedly. However, dyadic association and network metrics were weakly mediated by primary productivity. The composition of mixed species groups was associated with similarities in prey susceptibility but not with similarities in feeding habits of herbivores. Especially predation risk favoured the frequency of mixed species groups and pronounced dyadic associations which dilute predation risk and increase predator detection. While our results provide support for the stress gradient hypothesis, they also highlight that the relative importance of stressors is context-dependent.

Wolf risk fails to inspire fear in two mesocarnivores suggesting facilitation prevails

Large carnivores not only supress mesocarnivores via killing and instilling fear, but also facilitate them through carrion provisioning. Hence, mesocarnivores frequently face a trade-off between risk avoidance and food acquisition. Here we used the raccoon dog and red fox in Białowieża Forest, Poland as models for investigating how large carnivores shape mesocarnivore foraging behaviour in an area with widespread large carnivore carrion provisioning. Using a giving up density experiment we quantified mesocarnivore foraging responses to wolf body odour across a landscape-scale gradient in wolf encounter rates. At locations with higher wolf encounter rates, raccoon dogs depleted feeding trays more than at plots with lower wolf encounter rates. Simulating wolf presence by adding wolf body odour caused raccoon dogs to deplete feeding trays more at locations with low wolf encounter rates, but less at locations with high wolf encounter rates. Fox foraging costs did not vary with the application of wolf body odour or wolf encounter rates. The frequency that the mesocarnivores visited experimental foraging patches was unaffected by wolf body odour or landscape level encounter rates. These results provide further evidence that large carnivore suppression can play a subordinate role to facilitation in determining mesocarnivore behaviour. The varying raccoon dog response to wolf odour across the landscape-scale gradient in wolf encounter rates shows how mesocarnivore-large carnivore interactions can be context-dependent. We suggest that rather than testing the effects of single risk cues on prey behaviour, future studies should focus on understanding how context modifies the ecological impacts of large carnivores.

Patch quality and habitat fragmentation shape the foraging patterns of a specialist folivore

Research on use of foraging patches has focused on why herbivores visit or quit patches, yet little is known about visits to patches over time. Food quality, as reflected by higher nutritional quality and lower plant defenses, and physical patch characteristics, which offer protection from predators and weather, affect patch use and hence should influence their revisitation. Due to the potentially high costs of moving between patches, fragmented habitats are predicted to complicate foraging decisions of many animals. We aimed to determine how food quality, shelter availability and habitat fragmentation influence tree reuse by a specialist folivore, the koala, in a fragmented agricultural landscape. We GPS-tracked 23 koalas in northern New South Wales, Australia and collated number of revisits, average residence time, and average time-to-return to each tree. We measured tree characteristics including food quality (foliar nitrogen and toxic formylated phloroglucinol compounds, FPCs concentrations), tree size, and tree connectedness. We also modeled the costs of locomotion between trees. Koalas re-visited isolated trees with high leaf nitrogen disproportionately often. They spent longer time in trees with high leaf nitrogen, and in large trees used for shelter. They took longer to return to trees with low leaf nitrogen. Tree connectivity reduced travel costs between patches, being either individual or groups of trees. FPC levels had no detectable effect on patch revisitation. We conclude that food quality and shelter drive koala tree re-visits. Scattered, isolated trees with nutrient-rich leaves are valuable resource patches for koalas despite movement costs to reach them.

Evaluating the summer landscapes of predation risk and forage quality for elk (Cervus canadensis)

The recovery of carnivore populations in North American has consequences for trophic interactions and population dynamics of prey. In addition to direct effects on prey populations through killing, predators can influence prey behavior by imposing the risk of predation. The mechanisms through which patterns of space use by predators are linked to behavioral response by prey and nonconsumptive effects on prey population dynamics are poorly understood. Our goal was to characterize population- and individual-level patterns of resource selection by elk (Cervus canadensis) in response to risk of wolves (Canis lupus) and mountain lions (Puma concolor) and evaluate potential nonconsumptive effects of these behavioral patterns. We tested the hypothesis that individual elk risk-avoidance behavior during summer would result in exposure to lower-quality forage and reduced body fat and pregnancy rates. First, we evaluated individuals' second-order and third-order resource selection with a used-available sampling design. At the population level, we found evidence for a positive relationship between second- and third-order selection and forage, and an interaction between forage quality and mountain lion risk such that the relative probability of use at low mountain lion risk increased with forage quality but decreased at high risk at both orders of selection. We found no evidence of a population-level trade-off between forage quality and wolf risk. However, we found substantial among-individual heterogeneity in resource selection patterns such that population-level patterns were potentially misleading. We found no evidence that the diversity of individual resource selection patterns varied predictably with available resources, or that patterns of individual risk-related resource selection translated into biologically meaningful changes in body fat or pregnancy rates. Our work highlights the importance of evaluating individual responses to predation risk and predator hunting technique when assessing responses to predators and suggests nonconsumptive effects are not operating at a population scale in this system.

Validation of an Enzyme Immunoassay to Measure Faecal Glucocorticoid Metabolites in Common Brushtail Possums (Trichosurus vulpecula) to Evaluate Responses to Rehabilitation

Simple Summary

Little is known about how exposure to novel stimuli during rescue and rehabilitation could affect the physiology of native wildlife. We investigated this question in a species commonly rescued for rehabilitation, the common brushtail possum (Trichosurus vulpecula). Glucocorticoids (major hormones involved in stress responses) are metabolised in the body and excreted in the form of faecal glucocorticoid metabolites, which can be measured as a way of evaluating the response of animals to potential stressors. Comparing five enzyme immunoassay options, we found that the 11-oxoaetiocholanolone (abbreviation: 72a) EIA was the most suitable for measuring these metabolites in brushtail possums. This assay was then used to measure faecal glucocorticoid metabolite concentrations in 20 possums during rehabilitation. The probability of a physiological “stress” response occurring within five days of a potentially stressful event was about 50%, regardless of the type of event. There was a high level of variation in hormone profiles between possums. Our study has demonstrated that injured and orphaned possums show detectable changes in faecal glucocorticoid metabolites during captivity and rehabilitation, and has identified events that can induce a physiological response in some individuals. This is the first step toward understanding the relationship between these responses during rehabilitation and survival.

Abstract

Volunteer wildlife rehabilitators rescue and rehabilitate thousands of native animals every year in Australia. However, there is little known about how exposure to novel stimuli during rehabilitation could affect the physiology of wildlife. We investigated this question in a species that commonly enters rehabilitation, the common brushtail possum (Trichosurus vulpecula). We evaluated five enzyme immunoassays (EIA) to determine the most suitable for measuring faecal glucocorticoid metabolites (FGM) as a proxy for evaluating the response of brushtail possums to potential stressors during rehabilitation. An adrenocorticotrophin hormone (ACTH) challenge was conducted on wild-caught possums to determine the best-performing EIA based on the successful detection of FGM peaks in at least two of three possums. While a number of assays met these criteria, the 11-oxoaetiocholanolone (abbreviation: 72a) EIA was selected as it had the largest amplitude of change in response to the ACTH challenge. This assay was then used to measure FGM concentrations in 20 possums during rehabilitation. There was high variation in baseline FGM concentrations and response to captivity between possums. Significant changes in FGM levels were detected in most possums during captivity, but were not reliably associated with potentially stressful events that were identified by rehabilitators. The probability of an FGM peak occurring within five days of a potentially stressful event was about 50%, regardless of the type of event. Our study has demonstrated that injured and orphaned possums show changes in FGMs during captivity and rehabilitation and has identified events that can induce a physiological response in some individuals. We recommend that research now focus on the relationship between these responses during rehabilitation and pre- and post-release survival.

Food quality, security, and thermal refuge influence the use of microsites and patches by pygmy rabbits ( Brachylagus idahoensis ) across landscapes and seasons

How intensely animals use habitat features depends on their functional properties (i.e., how the feature influences fitness) and the spatial and temporal scale considered. For herbivores, habitat use is expected to reflect the competing risks of starvation, predation, and thermal stress, but the relative influence of each functional property is expected to vary in space and time. We examined how a dietary and habitat specialist, the pygmy rabbit (Brachylagus idahoensis), used these functional properties of its sagebrush habitat—food quality, security, and thermal refuge—at two hierarchical spatial scales (microsite and patch) across two seasons (winter and summer). At the microsite and patch scales, we determined which plant functional traits predicted the number of bites (i.e., foraging) by pygmy rabbits and the number of their fecal pellets (i.e., general habitat use). Pygmy rabbits used microsites and patches more intensely that had higher crude protein and aerial concealment cover and were closer to burrows. Food quality was more influential when rabbits used microsites within patches. Security was more influential in winter than summer, and more at Cedar Gulch than Camas. However, the influence of functional properties depended on phytochemical and structural properties of sagebrush and was not spatiotemporally consistent. These results show function‐dependent habitat use that varied according to specific activities by a central‐place browsing herbivore. Making spatially explicit predictions of the relative value of habitat features that influence different types of habitat use (i.e., foraging, hiding, and thermoregulating) will improve how we predict patterns of habitat use by herbivores and how we monitor and manage functional traits within habitats for wildlife.

The gut microbiome influences host diet selection behavior

The behavior of diet selection or diet choice can have wide-reaching implications, scaling from individual animals to ecological and evolutionary processes. Previous work in this area has largely ignored the potential for intestinal microbiota to modulate host foraging decisions. The notion that the gut microbiome may influence host foraging behavior has been highly speculated for years but has not yet been explicitly tested. Here, we show that germ-free mice colonized by differential microbiomes from wild rodents with varying natural feeding strategies exhibited significant differences in their voluntary dietary selection. Specifically, colonized mice differed in voluntary carbohydrate selection, and divergent feeding preferences were associated with differences in circulating essential amino acids, bacterial tryptophan metabolism, and intestinal morphology. Together, these results demonstrate a role for the microbiome in host nutritional physiology and foraging behavior.

Diet selection is a fundamental aspect of animal behavior with numerous ecological and evolutionary implications. While the underlying mechanisms are complex, the availability of essential dietary nutrients can strongly influence diet selection behavior. The gut microbiome has been shown to metabolize many of these same nutrients, leading to the untested hypothesis that intestinal microbiota may influence diet selection. Here, we show that germ-free mice colonized by gut microbiota from three rodent species with distinct foraging strategies differentially selected diets that varied in macronutrient composition. Specifically, we found that herbivore-conventionalized mice voluntarily selected a higher protein:carbohydrate (P:C) ratio diet, while omnivore- and carnivore-conventionalized mice selected a lower P:C ratio diet. In support of the long-standing hypothesis that tryptophan—the essential amino acid precursor of serotonin—serves as a peripheral signal regulating diet selection, bacterial genes involved in tryptophan metabolism and plasma tryptophan availability prior to the selection trial were significantly correlated with subsequent voluntary carbohydrate intake. Finally, herbivore-conventionalized mice exhibited larger intestinal compartments associated with microbial fermentation, broadly reflecting the intestinal morphology of their donor species. Together, these results demonstrate that gut microbiome can influence host diet selection behavior, perhaps by mediating the availability of essential amino acids, thereby revealing a mechanism by which the gut microbiota can influence host foraging behavior.

“Ecology of fear” in ungulates: Opportunities for improving conservation

Because ungulates are important contributors to ecosystem function, understanding the “ecology of fear” could be important to the conservation of ecosystems. Although studying ungulate ecology of fear is common, knowledge from ungulate systems is highly contested among ecologists. Here, we review the available literature on the ecology of fear in ungulates to generalize our current knowledge and how we can leverage it for conservation. Four general focus areas emerged from the 275 papers included in our literature search (and some papers were included in multiple categories): behavioral responses to predation risk (79%), physiological responses to predation risk (15%), trophic cascades resulting from ungulate responses to predation risk (20%), and manipulation of predation risk (1%). Of papers focused on behavior, 75% were about movement and habitat selection. Studies were biased toward North America (53%), tended to be focused on elk (Cervus canadensis; 29%), and were dominated by gray wolves (40%) or humans (39%) as predators of interest. Emerging literature suggests that we can utilize predation risk for conservation with top‐down (i.e., increasing predation risk) and bottom‐up (i.e., manipulating landscape characteristics to increase risk or risk perception) approaches. It is less clear whether fear‐related changes in physiology have population‐level fitness consequences or cascading effects, which could be fruitful avenues for future research. Conflicting evidence of trait‐mediated trophic cascades might be improved with better replication across systems and accounting for confounding effects of ungulate density. Improving our understanding of mechanisms modulating the nature of trophic cascades likely is most important to ensure desirable conservation outcomes. We recommend future work embrace the complexity of natural systems by attempting to link together the focal areas of study identified herein.

Contrasting physiological responses to habitat degradation in two arboreal mammals

To cope with the challenges presented by habitat degradation and loss, animals must often respond by adjusting physiological and behavioral mechanisms. Here we quantified physiological and behavioral traits, including body temperature and food consumption, of two mammals with differing thermoregulatory strategies in response to changes in climate and habitat. We show that both species responded to challenging climatic conditions by increasing torpor use to save energy, yet their responses were impacted by varying vegetation levels. Sugar gliders decreased torpor use in a dense habitat likely due to a signal of greater food production and protection from predators. Conversely, eastern pygmy possums employed more torpor perhaps to build up fat reserves in anticipation of leaner times. Indeed, in dense habitat eastern pygmy possums did not alter food intake yet showed an increase in body mass, whereas sugar gliders consumed less food and lost body mass, revealing the large energetic savings provided by torpor.

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Physiological responses to habitat degradation differ among mammals

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Hibernating eastern pygmy possums employ less torpor in degraded habitat

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Whereas sugar gliders, daily heterotherms, employ more torpor in degraded habitat

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These differing responses are perhaps due to perceived predation risk

Mule deer do more with less: comparing their nutritional requirements and tolerances with white-tailed deer

Congeneric species often share ecological niche space resulting in competitive interactions that either limit co-occurrence or lead to niche partitioning. Differences in fundamental nutritional niches mediated through character displacement or isolation during evolution are potential mechanisms that could explain overlapping distribution patterns of congenerics. We directly compared nutritional requirements and tolerances that influence the fundamental niche of mule (Odocoileus hemionus) and white-tailed deer (O. virginianus), which occur in allopatry and sympatry in similar realized ecological niches across their ranges in North America. Digestible energy and protein requirements and tolerances for plant fiber and plant secondary metabolites (PSMs) of both deer species were quantified using in vivo digestion and intake tolerance trials with six diets ranging in content of fiber, protein, and PSMs using tractable deer raised under identical conditions in captivity. We found that compared with white-tailed deer, mule deer required 54% less digestible protein and 21% less digestible energy intake per day to maintain body mass and nitrogen balance. In addition, they had higher fiber, energy, and dry matter digestibility and produced glucuronic acid (a byproduct of PSM detoxification) at a slower rate when consuming the monoterpene α-pinene. The mule deers’ enhanced physiological abilities to cope with low-quality, chemically defended forages relative to white-tailed deer might minimize potential competitive interactions in shared landscapes and provide a modest advantage to mule deer in habitats dominated by low-quality forages.

Olfactory cues of large carnivores modify red deer behavior and browsing intensity

This study examined the effect of perceived predation risk imposed by lynx (Lynx lynx) and wolf (Canis lupus) on red deer (Cervus elaphus) foraging behavior under experimental conditions. We hypothesized that in response to large carnivore scent red deer would increase their vigilance, although reducing the frequency and duration of visits to foraging sites. Consequently, browsing intensity on tree saplings was expected to decrease, whereas a higher proportion of more preferred species was expected to be browsed to compensate for higher foraging costs. We expected stronger responses towards the ambush predator lynx, compared with the cursorial predator wolf. These hypotheses were tested in a cafeteria experiment conducted within three red deer enclosures, each containing four experimental plots with olfactory cues of wolf, lynx, cow, and water as control. On each plot, a camera trap was placed and browsing intensity was measured for one consecutive week, repeated three times. Red deer reduced their visitation duration and browsing intensity on plots with large carnivore scent. Despite red deer showing a clear preference for certain tree species, the presence of large carnivore scent did not change selectivity towards different tree species. Contrary to our hypothesis, we found more pronounced effects of wolf (cursorial) compared with lynx (ambush). This study is the first to experimentally assess the perceived risk effects on the red deer foraging behavior of large carnivores differing in hunting modes. Our findings provide insights into the role of olfactory cues in predator-prey interactions and how they can modify fine-scale herbivore-plant interactions.

Sublethal effects of a rapidly spreading native alga on a key herbivore

Multiple anthropogenic stressors are causing a global decline in foundation species, including macrophytes, often resulting in the expansion of functionally different, more stressor-tolerant macrophytes. Previously subdominant species may experience further positive demographic feedback if they are exposed to weaker plant-herbivore interactions, possibly via decreased palatability or being structurally different from the species they are replacing. However, the consequences of the spread of opportunistic macrophytes for the local distribution and life history of herbivores are unknown.The green alga, Caulerpa filiformis, previously a subdominant macrophyte on low intertidal-shallow subtidal rock shores, is becoming locally more abundant and has spread into warmer waters across the coast of New South Wales, Australia.In this study, we measured (a) the distribution and abundance of a key consumer, the sea urchin Heliocidaris erythrogramma, across a seascape at sites where C. filiformis has become dominant, (b) performed behavioral field experiments to test the role of habitat selection in determining the local distribution of H. erythrogramma, and (c) consumer experiments to test differential palatability between previously dominant higher quality species like Ecklonia radiata and Sargassum sp. and C. filiformis and the physiological consequences of consuming it.At all sites, urchin densities were positively correlated with distance away from C. filiformis beds, and they actively moved away from beds. Feeding experiments showed that, while urchins consumed C. filiformis, sometimes in equal amounts to higher quality algae, there were strong sublethal consequences associated with C. filiformis consumption, mainly on reproductive potential (gonad size). Specifically, the gonad size of urchins that fed on C. filiformis was equivalent to that in starved urchins. There was also a tendency for urchin mortality to be greater when fed C. filiformis.Overall, strong negative effects on herbivore life-history traits and potentially their survivorship may establish further positive feedback on C. filiformis abundance that contributes to its spread and may mediate shifts from top-down to bottom-up control at locations where C. filiformis has become dominant.

The impact of variable predation risk on stress in snowshoe hares over the cycle in North America's boreal forest: adjusting to change

The boreal forest is one of the world's ecosystems most affected by global climate warming. The snowshoe hare, its predators, and their population dynamics dominate the mammalian component of the North American boreal forest. Our past research has shown the 9-11-year hare cycle to be predator driven, both directly as virtually all hares that die are killed by their predators, and indirectly through sublethal risk effects on hare stress physiology, behavior, and reproduction. We replicated this research over the entire cycle by measuring changes in predation risk expected to drive changes in chronic stress. We examined changes in hare condition and stress axis function using a hormonal challenge protocol in the late winter of 7 years-spanning all phases of the cycle from the increase through to the low (2014-2020). We simultaneously monitored changes in hare abundance as well as those of their primary predators, lynx and coyotes. Despite observing the expected changes in hare-predator numbers over the cycle, we did not see the predicted changes in chronic stress metrics in the peak and decline phases. Thus, the comprehensive physiological signature indicative of chronic predator-induced stress seen from our previous work was not present in this current cycle. We postulate that hares may now be increasingly showing behavior-mediated rather than stress-mediated responses to their predators. We present evidence that increases in primary productivity have affected boreal community structure and function. We speculate that climate change has caused this major shift in the indirect effects of predation on hares.

Among-individual differences in foraging modulate resource exploitation under perceived predation risk

Foraging is risky and involves balancing the benefits of resource acquisition with costs of predation. Optimal foraging theory predicts where, when and how long to forage in a given spatiotemporal distribution of risks and resources. However, significant variation in foraging behaviour and resource exploitation remain unexplained. Using single foragers in artificial landscapes of perceived risks and resources with diminishing returns, we aimed to test whether foraging behaviour and resource exploitation are adjusted to risk level, vary with risk during different components of foraging, and (co)vary among individuals. We quantified foraging behaviour and resource exploitation for 21 common voles (Microtus arvalis). By manipulating ground cover, we created simple landscapes of two food patches varying in perceived risk during feeding in a patch and/or while travelling between patches. Foraging of individuals was variable and adjusted to risk level and type. High risk during feeding reduced feeding duration and food consumption more strongly than risk while travelling. Risk during travelling modified the risk effects of feeding for changes between patches and resulting evenness of resource exploitation. Across risk conditions individuals differed consistently in when and how long they exploited resources and exposed themselves to risk. These among-individual differences in foraging behaviour were associated with consistent patterns of resource exploitation. Thus, different strategies in foraging-under-risk ultimately lead to unequal payoffs and might affect lower trophic levels in food webs. Inter-individual differences in foraging behaviour, i.e. foraging personalities, are an integral part of foraging behaviour and need to be fully integrated into optimal foraging theory.

The power of odour cues in shaping fine-scale search patterns of foraging mammalian herbivores

Foraging by mammalian herbivores has profound impacts on natural and modified landscapes, yet we know little about how they find food, limiting our ability to predict and manage their influence. Mathematical models show that foragers exploiting odour cues outperform a random walk strategy. However, discovering how free-ranging foragers exploit odours in real, complex landscapes has proven elusive because of technological constraints. We took a novel approach, using a sophisticated purpose-built thermal camera system to record fine-scale foraging by a generalist mammalian herbivore, the swamp wallaby (Wallabia bicolor). We tested the hypothesis that odour cues shape forager movement and behaviour in vegetation patches. To do this, we compared wallaby foraging in two odour landscapes: Control (natural vegetation with food and non-food plants interspersed) and +Apple (the same natural vegetation plus a single, highly palatable food source with novel odour (apple)). The +Apple treatment led to strongly directed foraging by wallabies: earlier visits to vegetation patches, straighter movement paths, more hopping and fewer stops than in the Control treatment. Our results provide clear empirical evidence that odour cues are harnessed for efficient, directed search even at this fine scale. We conclude that random walk models miss a key feature shaping foraging within patches.

Dual-locus DNA metabarcoding reveals southern hairy-nosed wombats (Lasiorhinus latifrons Owen) have a summer diet dominated by toxic invasive plants

Habitat degradation and summer droughts severely restrict feeding options for the endangered southern hairy-nosed wombat (SHNW; Lasiorhinus latifrons). We reconstructed SHNW summer diets by DNA metabarcoding from feces. We initially validated rbcL and ndhJ diet reconstructions using autopsied and captive animals. Subsequent diet reconstructions of wild wombats broadly reflected vegetative ground cover, implying local rather than long-range foraging. Diets were all dominated by alien invasives. Chemical analysis of alien food revealed Carrichtera annua contains high levels of glucosinolates. Clinical examination (7 animals) and autopsy (12 animals) revealed that the most degraded site also contained most individuals showing signs of glucosinolate poisoning. We infer that dietary poisoning through the ingestion of alien invasives may have contributed to the recent population crashes in the region. In floristically diverse sites, individuals appear to be able to manage glucosinolate intake by avoidance or episodic feeding but this strategy is less tractable in the most degraded sites. We conclude that recovery of the most affected populations may require effective Carrichtera management and interim supplementary feeding. More generally, we argue that protection against population decline by poisoning in territorial herbivores requires knowledge of their diet and of those food plants containing toxic principles.

Space use by animals on the urban fringe: interactive effects of sex and personality

Personality traits shape individual perceptions of risks and rewards, and so, should affect how animals value and use their environment. Evidence is emerging that personality affects foraging, space use, and exploitation of novel environments such as urban habitat. But the influence of personality is also hypothesized to be sex-dependent when primary motivation for space use differs between sexes, as often occurs in polygynous species. We tested the influence of personality traits, interacting with sex, on space use by the polygynous common brushtail possum, Trichosurus vulpecula, in an urban-woodland boundary in Sydney, Australia. We quantified personality traits, including exploration, using behavioral assays in an artificial arena. We also GPS-tracked free-ranging individuals, and measured range size, core area: home range, and proportional urban range. We found that personality traits affected space use either as a main effect or, as predicted, an interaction with sex. More exploratory animals, regardless of sex, had higher core area: home range ratios and proportionally larger ranges within urban habitat. However, less exploratory females yet more exploratory males had larger ranges. Our findings provide new insight into movement ecology by demonstrating, for the first time, the sex-dependent influence of personality. The demonstrated influence of personality on urban use by possums also suggests a personality filter for wildlife, as populations transition into urban areas. Finally, as individuals at the interface between urban and natural habitat are also a conduit between the two, a corollary of our findings is that there may be personality-mediated spread of disease across this boundary.

Variation in anti-predator behaviors of white-tailed deer (Odocoileus virginianus) in a multi-predator system

Anti-predator responses to perceived predation risk can influence population demography. Understanding the relative effect of predator exposure and intraspecific interactions across a variety of anti-predator behaviors provides important insight into inter- and intra-specific drivers of species-specific behaviors. We merged classical behavioral observation methods with camera trapping techniques to examine anti-predator behaviors of white-tailed deer (Odocoileus virginianus (Zimmermann, 1780)) relative to variation in predator exposure and interspecific interactions. We coded 772 behavioral observations from >180 000 images spanning 605 trap-nights. Seasonal differences in behavioral responses to diminishing returns on foraging effort indicated that deer are risk-averse foragers and are more likely to exhibit risky behaviors in the presence of a concentrated food resource when the nutritional value of food resources are high. However, deer tended to spend less time at a site as resources diminished, supporting marginal value theories of habitat use. Intraspecific interaction predicted vigilance and the amount of time spent at a site. Similar to many other species, deer tended to be less vigilant and spend more time at a site as group size increased. Our research suggests that white-tailed deer in Wisconsin make foraging decisions based on factors associated with individual fitness, presence of conspecifics, and habitat characteristics.

A framework to measure the wildness of managed large vertebrate populations

As landscapes continue to fall under human influence through habitat loss and fragmentation, fencing is increasingly being used to mitigate anthropogenic threats and enhance the commercial value of wildlife. Subsequent intensification of management potentially erodes wildness by disembodying populations from landscape-level processes, thereby disconnecting species from natural selection. Tools are needed to measure the degree to which populations of large vertebrate species in formally protected and privately owned wildlife areas are self-sustaining and free to adapt. We devised a framework to measure such wildness based on 6 attributes relating to the evolutionary and ecological dynamics of vertebrates (space, disease and parasite resistance, exposure to predation, exposure to limitations and fluctuations of food and water supply, and reproduction). For each attribute, we set empirical, species-specific thresholds between 5 wildness states based on quantifiable management interventions. We analysed data from 205 private wildlife properties with management objectives spanning ecotourism to consumptive utilization to test the framework on 6 herbivore species representing a range of conservation statuses and commercial values. Wildness scores among species differed significantly, and the proportion of populations identified as wild ranged from 12% to 84%, which indicates the tool detected site-scale differences both among populations of different species and populations of the same species under different management regimes. By quantifying wildness, this framework provides practitioners with standardized measurement units that link biodiversity with the sustainable use of wildlife. Applications include informing species management plans at local scales; standardizing the inclusion of managed populations in red-list assessments; and providing a platform for certification and regulation of wildlife-based economies. Applying this framework may help embed wildness as a normative value in policy and mitigate the shifting baseline of what it means to truly conserve a species.

Contingent strategies of risk management by snowshoe hares

Prey individuals employ several adaptive behaviours to reduce predation risk. We need to learn how those behaviours interact in an overall strategy of risk management, how strategies vary with changing conditions, and whether some behaviours might compensate for others. I addressed these issues with manipulative experiments evaluating how snowshoe hares’ ( Lepus americanus) vigilance varies with their giving-up densities (GUDs) in artificial food patches. I tested whether the results, collected when there was no evidence of predation, were congruent with an earlier study under higher predation. When predator sign was common, vigilance depended directly on habitat. But when risk was low, habitat’s influence on vigilance was indirect. Hares were least vigilant during the new moon where the distance to escape habitat was far, but only in open risky habitat. Hares were more vigilant during the full moon, but only at stations far from escape habitat. Moon phase and additional cover had no effect on GUDs that were highest at open risky stations far from escape habitat. The results suggest that reduced risk allowed hares to allocate less time to vigilance, but they needed to forage for similar amounts of food during each moon phase to maintain their energetic state.

Advances in population ecology and species interactions in mammals

The study of mammals has promoted the development and testing of many ideas in contemporary ecology. Here we address recent developments in foraging and habitat selection, source–sink dynamics, competition (both within and between species), population cycles, predation (including apparent competition), mutualism, and biological invasions. Because mammals are appealing to the public, ecological insight gleaned from the study of mammals has disproportionate potential in educating the public about ecological principles and their application to wise management. Mammals have been central to many computational and statistical developments in recent years, including refinements to traditional approaches and metrics (e.g., capture-recapture) as well as advancements of novel and developing fields (e.g., spatial capture-recapture, occupancy modeling, integrated population models). The study of mammals also poses challenges in terms of fully characterizing dynamics in natural conditions. Ongoing climate change threatens to affect global ecosystems, and mammals provide visible and charismatic subjects for research on local and regional effects of such change as well as predictive modeling of the long-term effects on ecosystem function and stability. Although much remains to be done, the population ecology of mammals continues to be a vibrant and rapidly developing field. We anticipate that the next quarter century will prove as exciting and productive for the study of mammals as has the recent one.

Bottom-up behaviourally mediated trophic cascades in plankton food webs

Our traditional view of the interactions between marine organisms is conceptualized as food webs where species interact with one another mainly via direct consumption. However, recent research suggests that understudied non-consumptive interactions, such as behaviourally mediated indirect interactions (BMIIs), can influence marine ecosystems as much as consumptive effects. Here, we show, to our knowledge, the first experimental evidence and quantification of bottom-up BMIIs in plankton food webs. We used observational, modelling and experimental approaches to investigate how behavioural responses to resource availability influence predation mortality on grazers with different foraging strategies (ambushing versus active foraging). A three-level food chain was used: phytoplankton as resource, copepod nauplii as grazers of phytoplankton and a large copepod as a predator. Ambushers showed little change in foraging activity with resource availability, whereas active foragers decreased their foraging activity with increasing resources, which led to a decrease (24-50%) in predation mortality. Therefore, an increase in resources ('initiator') causes behavioural changes in active grazers ('transmitter'), which ultimately negatively affects predator ('receiver') consumption rates. Consequently, increase in resource abundance may result in decreasing energy transfer to higher trophic levels. These results indicate that behaviourally mediated interactions drive marine food web dynamics differently from that predicted by only density-mediated or consumptive interactions.

Landscapes of Fear: Spatial Patterns of Risk Perception and Response

Animals experience varying levels of predation risk as they navigate heterogeneous landscapes, and behavioral responses to perceived risk can structure ecosystems. The concept of the landscape of fear has recently become central to describing this spatial variation in risk, perception, and response. We present a framework linking the landscape of fear, defined as spatial variation in prey perception of risk, to the underlying physical landscape and predation risk, and to resulting patterns of prey distribution and antipredator behavior. By disambiguating the mechanisms through which prey perceive risk and incorporate fear into decision making, we can better quantify the nonlinear relationship between risk and response and evaluate the relative importance of the landscape of fear across taxa and ecosystems.

Trade-offs between sight lines and escape habitat determine spatial strategies of risk management by a keystone herbivore

Prey individuals possess four basic strategies to manage predation risk while foraging: time allocation, space use, apprehension, and foraging tenacity. But there are no direct tests of theory detailing how spatial strategies change and covary from fine to coarse scales of environmental variability. We address this shortcoming with experiments that estimated space use and vigilance of snowshoe hares while we measured foraging tenacity in artificial resource patches placed in risky open versus safe alder habitat. Hares employed only two of eight a priori options to manage risk. Hares increased vigilance and reduced foraging in open areas as the distance from cover increased. Hares did not differentiate between open and alder habitats, increase vigilance at the coarse-grained scale, or reduce vigilance and foraging tenacity under supplemental cover. Hares were more vigilant in the putatively safe alder than in the purportedly risky open habitat. These apparently paradoxical results appear to reflect a trade-off between the benefit of alder as escape habitat and the cost of obscured sight lines that reduce predator detection. The trade-off also appears to equalize safety between habitats at small scales and suggests that common-sense predictions detailing how prey reduce risk may make no sense at all.

Experimental evolution of personality traits: open-field exploration in bank voles from a multidirectional selection experiment

Evolution of complex physiological adaptations could be driven by natural selection acting on behavioral traits. Consequently, animal personality traits and their correlation with physiological traits have become an engaging research area. Here, we applied a unique experimental evolution model-lines of bank voles selected for (A) high exercise-induced aerobic metabolism, (H) ability to cope with low-quality herbivorous diet, and (P) intensity of predatory behavior, that is, traits shaping evolutionary path and diversity of mammals-and asked how the selection affected the voles' personality traits, assessed in an open field test. The A- and P-line voles were more active, whereas the H-line voles were less active, compared those from unselected control lines (C). H-line voles moved slower but on more meandering trajectories, which indicated a more thorough exploration, whereas the A- and P-line voles moved faster and on straighter trajectories. A-line voles showed also an increased escape propensity, whereas P-line voles tended to be bolder. The remarkable correlated responses to the selection indicate a common genetic underlying mechanism of behavioral and physiological traits, and support the paradigm of evolutionary physiology built around the concept of correlated evolution of behavior and physiology.