The Australian SuperSite Network: A continental, long-term terrestrial ecosystem observatory

Strategic roadmap to assess forest vulnerability under air pollution and climate change

Although it is an integral part of global change, most of the research addressing the effects of climate change on forests have overlooked the role of environmental pollution. Similarly, most studies investigating the effects of air pollutants on forests have generally neglected the impacts of climate change. We review the current knowledge on combined air pollution and climate change effects on global forest ecosystems and identify several key research priorities as a roadmap for the future. Specifically, we recommend (1) the establishment of much denser array of monitoring sites, particularly in the South Hemisphere; (2) further integration of ground and satellite monitoring; (3) generation of flux-based standards and critical levels taking into account the sensitivity of dominant forest tree species; (4) long-term monitoring of N, S, P cycles and base cations deposition together at global scale; (5) intensification of experimental studies, addressing the combined effects of different abiotic factors on forests by assuring a better representation of taxonomic and functional diversity across the ~73,000 tree species on Earth; (6) more experimental focus on phenomics and genomics; (7) improved knowledge on key processes regulating the dynamics of radionuclides in forest systems; and (8) development of models integrating air pollution and climate change data from long-term monitoring programs.

Bridge to the future: Important lessons from 20 years of ecosystem observations made by the OzFlux network

In 2020, the Australian and New Zealand flux research and monitoring network, OzFlux, celebrated its 20th anniversary by reflecting on the lessons learned through two decades of ecosystem studies on global change biology. OzFlux is a network not only for ecosystem researchers, but also for those 'next users' of the knowledge, information and data that such networks provide. Here, we focus on eight lessons across topics of climate change and variability, disturbance and resilience, drought and heat stress and synergies with remote sensing and modelling. In distilling the key lessons learned, we also identify where further research is needed to fill knowledge gaps and improve the utility and relevance of the outputs from OzFlux. Extreme climate variability across Australia and New Zealand (droughts and flooding rains) provides a natural laboratory for a global understanding of ecosystems in this time of accelerating climate change. As evidence of worsening global fire risk emerges, the natural ability of these ecosystems to recover from disturbances, such as fire and cyclones, provides lessons on adaptation and resilience to disturbance. Drought and heatwaves are common occurrences across large parts of the region and can tip an ecosystem's carbon budget from a net CO2 sink to a net CO2 source. Despite such responses to stress, ecosystems at OzFlux sites show their resilience to climate variability by rapidly pivoting back to a strong carbon sink upon the return of favourable conditions. Located in under-represented areas, OzFlux data have the potential for reducing uncertainties in global remote sensing products, and these data provide several opportunities to develop new theories and improve our ecosystem models. The accumulated impacts of these lessons over the last 20 years highlights the value of long-term flux observations for natural and managed systems. A future vision for OzFlux includes ongoing and newly developed synergies with ecophysiologists, ecologists, geologists, remote sensors and modellers.

Eucalyptus obliqua tall forest in cool, temperate Tasmania becomes a carbon source during a protracted warm spell in November 2017

Tasmania experienced a protracted warm spell in November 2017. Temperatures were lower than those usually characterising heatwaves. Nonetheless the warm spell represented an extreme anomaly based on the historical local climate. Eddy covariance measurements of fluxes in a Eucalyptus obliqua tall forest at Warra, southern Tasmania during the warm spell were compared with measurements in the same period of the previous year when temperatures were closer to average. Compared with previous year, the warm spell resulted in 31% lower gross primary productivity (GPP), 58% higher ecosystem respiration (ER) and the forest switching from a carbon sink to a source. Significantly higher net radiation received during the warm spell was dissipated by increased latent heat flux, while canopy conductance was comparable with the previous year. Stomatal regulation to limit water loss was therefore unlikely as the reason for the lower GPP during the warm spell. Temperatures during the warm spell were supra-optimal for GPP for 75% of the daylight hours. The decline in GPP at Warra during the warm spell was therefore most likely due to temperatures exceeding the optimum for GPP. All else being equal, these forests will be weaker carbon sinks if, as predicted, warming events become more common.

Spectral Retrieval of Eucalypt Leaf Biochemical Traits by Inversion of the Fluspect-Cx Model

Leaf biochemical traits indicating early symptoms of plant stress can be assessed using imaging spectroscopy combined with radiative transfer modelling (RTM). In this study, we assessed the potential applicability of the leaf radiative transfer model Fluspect-Cx to simulate optical properties and estimate leaf biochemical traits through inversion of two native Australian eucalypt species: Eucalyptus dalrympleana and E. delegetensis. The comparison of measured and simulated optical properties revealed the necessity to recalibrate the refractive index and specific absorption coefficients of the eucalypt leaves’ biochemical constituents. Subsequent validation of the modified Fluspect-Cx showed a closer agreement with the spectral measurements. The average root mean square error (RMSE) of reflectance, transmittance and absorptance values within the wavelength interval of 450–1600 nm was smaller than 1%. We compared the performance of both the original and recalibrated Fluspect-Cx versions through inversions aiming to simultaneously retrieve all model inputs from leaf optical properties with and without prior information. The inversion of recalibrated Fluspect-Cx constrained by laboratory-based measurements produced a superior accuracy in estimations of leaf water content (RMSE = 0.0013 cm, NRMSE = 6.55%) and dry matter content (RMSE = 0.0036 g·cm−2, NRMSE = 21.28%). The estimation accuracies of chlorophyll content (RMSE = 8.46 µg·cm−2, NRMSE = 24.73%), carotenoid content (RMSE = 3.83 µg·cm−2, NRMSE = 30.82%) and anthocyanin content (RMSE = 1.69 µg·cm−2, NRMSE = 37.12%) were only marginally better than for the inversion without any constraints. Additionally, we investigated the possibility to substitute the prior information derived in the laboratory by non-destructive reflectance-based spectral indices sensitive to the retrieved biochemical traits, resulting in the most accurate estimation of carotenoid content (RMSE = 3.65 µg·cm−2, NRMSE = 29%). Future coupling of the recalibrated Fluspect with a forest canopy RTM is expected to facilitate retrieval of biophysical traits from spectral air/space-borne image data, allowing for assessing the actual physiological status and health of eucalypt forest canopies.

Living on the edge: A continental-scale assessment of forest vulnerability to drought

Globally, forests are facing an increasing risk of mass tree mortality events associated with extreme droughts and higher temperatures. Hydraulic dysfunction is considered a key mechanism of drought-triggered dieback. By leveraging the climate breadth of the Australian landscape and a national network of research sites (Terrestrial Ecosystem Research Network), we conducted a continental-scale study of physiological and hydraulic traits of 33 native tree species from contrasting environments to disentangle the complexities of plant response to drought across communities. We found strong relationships between key plant hydraulic traits and site aridity. Leaf turgor loss point and xylem embolism resistance were correlated with minimum water potential experienced by each species. Across the data set, there was a strong coordination between hydraulic traits, including those linked to hydraulic safety, stomatal regulation and the cost of carbon investment into woody tissue. These results illustrate that aridity has acted as a strong selective pressure, shaping hydraulic traits of tree species across the Australian landscape. Hydraulic safety margins were constrained across sites, with species from wetter sites tending to have smaller safety margin compared with species at drier sites, suggesting trees are operating close to their hydraulic thresholds and forest biomes across the spectrum may be susceptible to shifts in climate that result in the intensification of drought.

Acclimation of leaf respiration temperature responses across thermally contrasting biomes

Short-term temperature response curves of leaf dark respiration (R-T) provide insights into a critical process that influences plant net carbon exchange. This includes how respiratory traits acclimate to sustained changes in the environment. Our study analysed 860 high-resolution R-T (10-70°C range) curves for: (a) 62 evergreen species measured in two contrasting seasons across several field sites/biomes; and (b) 21 species (subset of those sampled in the field) grown in glasshouses at 20°C : 15°C, 25°C : 20°C and 30°C : 25°C, day : night. In the field, across all sites/seasons, variations in R₂₅ (measured at 25°C) and the leaf T where R reached its maximum (T_max ) were explained by growth T (mean air-T of 30-d before measurement), solar irradiance and vapour pressure deficit, with growth T having the strongest influence. R₂₅ decreased and T_max increased with rising growth T across all sites and seasons with the single exception of winter at the cool-temperate rainforest site where irradiance was low. The glasshouse study confirmed that R₂₅ and T_max thermally acclimated. Collectively, the results suggest: (1) thermal acclimation of leaf R is common in most biomes; and (2) the high T threshold of respiration dynamically adjusts upward when plants are challenged with warmer and hotter climates.

Exploring the Variability of Tropical Savanna Tree Structural Allometry with Terrestrial Laser Scanning

Individual tree carbon stock estimates typically rely on allometric scaling relationships established between field-measured stem diameter (DBH) and destructively harvested biomass. The use of DBH-based allometric equations to estimate the carbon stored over larger areas therefore, assumes that tree architecture, including branching and crown structures, are consistent for a given DBH, and that minor variations cancel out at the plot scale. We aimed to explore the degree of structural variation present at the individual tree level across a range of size-classes. We used terrestrial laser scanning (TLS) to measure the 3D structure of each tree in a 1 ha savanna plot, with coincident field-inventory. We found that stem reconstructions from TLS captured both the spatial distribution pattern and the DBH of individual trees with high confidence when compared with manual measurements (R2 = 0.98, RMSE = 0.0102 m). Our exploration of the relationship between DBH, crown size and tree height revealed significant variability in savanna tree crown structure (measured as crown area). These findings question the reliability of DBH-based allometric equations for adequately representing diversity in tree architecture, and therefore carbon storage, in tropical savannas. However, adoption of TLS outside environmental research has been slow due to considerable capital cost and monitoring programs often continue to rely on sub-plot monitoring and traditional allometric equations. A central aspect of our study explores the utility of a lower-cost TLS system not generally used for vegetation surveys. We discuss the potential benefits of alternative TLS-based approaches, such as explicit modelling of tree structure or voxel-based analyses, to capture the diverse 3D structures of savanna trees. Our research highlights structural heterogeneity as a source of uncertainty in savanna tree carbon estimates and demonstrates the potential for greater inclusion of cost-effective TLS technology in national monitoring programs.

Net landscape carbon balance of a tropical savanna: Relative importance of fire and aquatic export in offsetting terrestrial production

The magnitude of the terrestrial carbon (C) sink may be overestimated globally due to the difficulty of accounting for all C losses across heterogeneous landscapes. More complete assessments of net landscape C balances (NLCB) are needed that integrate both emissions by fire and transfer to aquatic systems, two key loss pathways of terrestrial C. These pathways can be particularly significant in the wet-dry tropics, where fire plays a fundamental part in ecosystems and where intense rainfall and seasonal flooding can result in considerable aquatic C export (ΣF_aq ). Here, we determined the NLCB of a lowland catchment (~140 km² ) in tropical Australia over 2 years by evaluating net terrestrial productivity (NEP), fire-related C emissions and ΣF_aq (comprising both downstream transport and gaseous evasion) for the two main landscape components, that is, savanna woodland and seasonal wetlands. We found that the catchment was a large C sink (NLCB 334 Mg C km^-2  year^-1 ), and that savanna and wetland areas contributed 84% and 16% to this sink, respectively. Annually, fire emissions (-56 Mg C km^-2  year^-1 ) and ΣF_aq (-28 Mg C km^-2  year^-1 ) reduced NEP by 13% and 7%, respectively. Savanna burning shifted the catchment to a net C source for several months during the dry season, while ΣF_aq significantly offset NEP during the wet season, with a disproportionate contribution by single major monsoonal events-up to 39% of annual ΣF_aq was exported in one event. We hypothesize that wetter and hotter conditions in the wet-dry tropics in the future will increase ΣF_aq and fire emissions, potentially further reducing the current C sink in the region. More long-term studies are needed to upscale this first NLCB estimate to less productive, yet hydrologically dynamic regions of the wet-dry tropics where our result indicating a significant C sink may not hold.

An Operational Split-Window Algorithm for Retrieving Land Surface Temperature from Geostationary Satellite Data: A Case Study on Himawari-8 AHI Data

An operational split-window (SW) algorithm was developed to retrieve high-temporal-resolution land surface temperature (LST) from global geostationary (GEO) satellite data. First, the MODTRAN 5.2 and SeeBor V5.0 atmospheric profiles were used to establish a simulation database to derive the SW algorithm coefficients for GEO satellites. Then, the dynamic land surface emissivities (LSEs) in the two SW bands were estimated using the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) Global Emissivity Dataset (GED), fractional vegetation cover (FVC), and snow cover products. Here, the proposed SW algorithm was applied to Himawari-8 Advanced Himawari Imager (AHI) observations. LST estimates were retrieved in January, April, July, and October 2016, and three validation methods were used to evaluate the LST retrievals, including the temperature-based (T-based) method, radiance-based (R-based) method, and intercomparison method. The in situ night-time observations from two Heihe Watershed Allied Telemetry Experimental Research (HiWATER) sites and four Terrestrial Ecosystem Research Network (TERN) OzFlux sites were used in the T-based validation, where a mean bias of −0.70 K and a mean root-mean-square error (RMSE) of 2.29 K were achieved. In the R-based validation, the biases were 0.14 and −0.13 K and RMSEs were 0.83 and 0.86 K for the daytime and nighttime, respectively, over four forest sites, four desert sites, and two inland water sites. Additionally, the AHI LST estimates were compared with the Collection 6 MYD11_L2 and MYD21_L2 LST products over southeastern China and the Australian continent, and the results indicated that the AHI LST was more consistent with the MYD21 LST and was generally higher than the MYD11 LST. The pronounced discrepancy between the AHI and MYD11 LST could be mainly caused by the differences in the emissivities used. We conclude that the developed SW algorithm is of high accuracy and shows promise in producing LST data with global coverage using observations from a constellation of GEO satellites.

THEMS: an automated thermal and hyperspectral proximal sensing system for canopy reflectance, radiance and temperature

BACKGROUND

Earth Observation 'EO' remote sensing technology development enables original insights into vegetation function and health at ever finer temporal, spectral and spatial resolution. Research sites equipped with monitoring infrastructure such as flux towers operate at a key bridging scale between satellite platform measurements and on-the-ground leaf-level processes.

RESULTS

This paper presents the technical details of the design and operation of a proximal observation system 'THEMS' that generates unattended long-term high quality thermal and hyperspectral images of a forest canopy on a short (sub-daily) timescale. The primary purpose of the system is to measure canopy temperature, spectral reflectance and radiance coincident with a highly instrumented flux tower site for benchmarking purposes. Basic system capability is demonstrated through low level data product descriptions of the high-resolution multi-angular imagery and ancillary data streams. The system has been successfully operational for more than 2 years with little to no intervention.

CONCLUSIONS

These data can then be used to derive remotely sensed proxies of canopy and ecosystem function to study temporal forest dynamics over a wide range of wavelengths, spatial scales (individual trees to canopy), and temporal scales (minutes to multiple years). The multi-purpose system is intended to provide unprecedented spatio-temporal ecophysiological insight and to underpin upscaling of remotely sensed dynamic ecosystem water, CO₂, and energy exchange processes.

Using a paired tower approach and remote sensing to assess carbon sequestration and energy distribution in a heterogeneous sclerophyll forest

The critically endangered Cumberland Plain woodland within the greater Sydney metropolitan area hosts a dwindling refuge for melaleuca trees, an integral part of Australia's native vegetation. Despite their high carbon stocks, melaleucas have not explicitly been targeted for studies assessing their carbon sequestration potential, and especially little is known about their energy cycling or their response to increasing climate stress, precluding a holistic assessment of the resilience of Australia's forests to climate change. To improve our understanding of the role of melaleuca forest responses to climate stress, we combined forest inventory and airborne LiDAR data to identify species distribution and associated variations in forest structure, and deployed flux towers in a melaleuca-dominated (AU-Mel) and in a eucalypt-dominated (AU-Cum) stand to simultaneously monitor carbon and energy fluxes under typical growing conditions, as well as during periods with high atmospheric demand and low soil water content. We discovered that the species distribution at our study site affected the vertical vegetation structure, leading to differences in canopy coverage (75% at AU-Cum vs. 84% at AU-Mel) and plant area index (2.1 m² m^-2 at AU-Cum vs. 2.6 m² m^-2 at AU-Mel) that resulted in a heterogeneous forest landscape. Furthermore, we identified that both stands had comparable net daytime carbon exchange and sensible heat flux, whereas daytime latent heat flux (115.8 W m^-2 at AU-Cum vs 119.4 W m^-2 at AU-Mel, respectively) was higher at the melaleuca stand, contributing to a 0.3 °C decrease in air temperature and reduced vapor pressure deficit above the melaleuca canopy. However, increased canopy conductance and higher latent heat flux during moderate VPD or when soil moisture was low indicated a lack of water preservation at the melaleuca stand, highlighting the potential for increased vulnerability of melaleucas to projected hotter and drier future climates.

Research questions to facilitate the future development of European long-term ecosystem research infrastructures: A horizon scanning exercise

Distributed environmental research infrastructures are important to support assessments of the effects of global change on landscapes, ecosystems and society. These infrastructures need to provide continuity to address long-term change, yet be flexible enough to respond to rapid societal and technological developments that modify research priorities. We used a horizon scanning exercise to identify and prioritize emerging research questions for the future development of ecosystem and socio-ecological research infrastructures in Europe. Twenty research questions covered topics related to (i) ecosystem structures and processes, (ii) the impacts of anthropogenic drivers on ecosystems, (iii) ecosystem services and socio-ecological systems and (iv), methods and research infrastructures. Several key priorities for the development of research infrastructures emerged. Addressing complex environmental issues requires the adoption of a whole-system approach, achieved through integration of biotic, abiotic and socio-economic measurements. Interoperability among different research infrastructures needs to be improved by developing standard measurements, harmonizing methods, and establishing capacities and tools for data integration, processing, storage and analysis. Future research infrastructures should support a range of methodological approaches including observation, experiments and modelling. They should also have flexibility to respond to new requirements, for example by adjusting the spatio-temporal design of measurements. When new methods are introduced, compatibility with important long-term data series must be ensured. Finally, indicators, tools, and transdisciplinary approaches to identify, quantify and value ecosystem services across spatial scales and domains need to be advanced.

The validity of optimal leaf traits modelled on environmental conditions

The ratio of leaf intercellular to ambient CO₂ (χ) is modulated by stomatal conductance (g_s ). These quantities link carbon (C) assimilation with transpiration, and along with photosynthetic capacities (V_cmax and J_max ) are required to model terrestrial C uptake. We use optimization criteria based on the growth environment to generate predicted values of photosynthetic and water-use efficiency traits and test these against a unique dataset. Leaf gas-exchange parameters and carbon isotope discrimination were analysed in relation to local climate across a continental network of study sites. Sun-exposed leaves of 50 species at seven sites were measured in contrasting seasons. Values of χ predicted from growth temperature and vapour pressure deficit were closely correlated to ratios derived from C isotope (δ¹³ C) measurements. Correlations were stronger in the growing season. Predicted values of photosynthetic traits, including carboxylation capacity (V_cmax ), derived from δ¹³ C, growth temperature and solar radiation, showed meaningful agreement with inferred values derived from gas-exchange measurements. Between-site differences in water-use efficiency were, however, only weakly linked to the plant's growth environment and did not show seasonal variation. These results support the general hypothesis that many key parameters required by Earth system models are adaptive and predictable from plants' growth environments.

Can UAV-Based Infrared Thermography Be Used to Study Plant-Parasite Interactions between Mistletoe and Eucalypt Trees?

Some of the remnants of the Cumberland Plain woodland, an endangered dry sclerophyllous forest type of New South Wales, Australia, host large populations of mistletoe. In this study, the extent of mistletoe infection was investigated based on a forest inventory. We found that the mistletoe infection rate was relatively high, with 69% of the Eucalyptus fibrosa and 75% of the E. moluccana trees being infected. Next, to study the potential consequences of the infection for the trees, canopy temperatures of mistletoe plants and of infected and uninfected trees were analyzed using thermal imagery acquired during 10 flights with an unmanned aerial vehicle (UAV) in two consecutive summer seasons. Throughout all flight campaigns, mistletoe canopy temperature was 0.3–2 K lower than the temperature of the eucalypt canopy it was growing in, suggesting higher transpiration rates. Differences in canopy temperature between infected eucalypt foliage and mistletoe were particularly large when incoming radiation peaked. In these conditions, eucalypt foliage from infected trees also had significantly higher canopy temperatures (and likely lower transpiration rates) compared to that of uninfected trees of the same species. The study demonstrates the potential of using UAV-based infrared thermography for studying plant-water relations of mistletoe and its hosts.

Genesis, goals and achievements of Long-Term Ecological Research at the global scale: A critical review of ILTER and future directions

Since its founding in 1993 the International Long-term Ecological Research Network (ILTER) has gone through pronounced development phases. The current network comprises 44 active member LTER networks representing 700 LTER Sites and ~80 LTSER Platforms across all continents, active in the fields of ecosystem, critical zone and socio-ecological research. The critical challenges and most important achievements of the initial phase have now become state-of-the-art in networking for excellent science. At the same time increasing integration, accelerating technology, networking of resources and a strong pull for more socially relevant scientific information have been modifying the mission and goals of ILTER. This article provides a critical review of ILTER's mission, goals, development and impacts. Major characteristics, tools, services, partnerships and selected examples of relative strengths relevant for advancing ILTER are presented. We elaborate on the tradeoffs between the needs of the scientific community and stakeholder expectations. The embedding of ILTER in an increasingly collaborative landscape of global environmental observation and ecological research networks and infrastructures is also reflected by developments of pioneering regional and national LTER networks such as SAEON in South Africa, CERN/CEOBEX in China, TERN in Australia or eLTER RI in Europe. The primary role of ILTER is currently seen as a mechanism to investigate ecosystem structure, function, and services in response to a wide range of environmental forcings using long-term, place-based research. We suggest four main fields of activities and advancements for the next decade through development/delivery of a: (1) Global multi-disciplinary community of researchers and research institutes; (2) Strategic global framework and strong partnerships in ecosystem observation and research; (3) Global Research Infrastructure (GRI); and (4) a scientific knowledge factory for societally relevant information on sustainable use of natural resources.