1
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Drobek M, Cybulska J, Zdunek A, Sas-Paszt L, Frąc M. Effect of microbial biostimulants on the antioxidant profile, antioxidant capacity and activity of enzymes influencing the quality level of raspberries (Rubus idaeus L.). Food Chem 2024; 454:139746. [PMID: 38795624 DOI: 10.1016/j.foodchem.2024.139746] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Revised: 05/15/2024] [Accepted: 05/17/2024] [Indexed: 05/28/2024]
Abstract
The influence of four microbial biostimulants containing various strains of Bacillus subtilis and/or Paenibacillus sp. on the quality of raspberries cv. Delniwa, Poemat, and Enrosadira cultivated in two consecutive seasons was investigated. The biostimulants influenced the antioxidant level, antioxidant capacity, phenolic acids and flavonoids profiles, enzymatic activity, and the degree of methylation and acetylation of the pectin in the raspberry fruits. The biostimulants had the greatest effect on the antioxidant content (16% - 20% increase) and capacity in the Delniwa raspberry fruits from the first season. A positive correlation was found between the activity of the β-galactosidase enzyme and ferric reducing power. In the second season, a decrease in the activity of pectin esterase and α-L-arabinofuranosidase and an increase in the degree of methylation of pectin were noted. Our results suggest that the changes in raspberry quality were related to the type of biostimulant applied.
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Affiliation(s)
- Magdalena Drobek
- Institute of Agrophysics, Polish Academy of Sciences, Doświadczalna 4, 20-290 Lublin, Poland
| | - Justyna Cybulska
- Institute of Agrophysics, Polish Academy of Sciences, Doświadczalna 4, 20-290 Lublin, Poland.
| | - Artur Zdunek
- Institute of Agrophysics, Polish Academy of Sciences, Doświadczalna 4, 20-290 Lublin, Poland
| | - Lidia Sas-Paszt
- The National Institute of Horticultural Research, Konstytucji 3 Maja 1/3, 96-100 Skierniewice, Poland
| | - Magdalena Frąc
- Institute of Agrophysics, Polish Academy of Sciences, Doświadczalna 4, 20-290 Lublin, Poland
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2
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Synergistic action of thermophilic pectinases for pectin bioconversion into D-galacturonic acid. Enzyme Microb Technol 2022; 160:110071. [DOI: 10.1016/j.enzmictec.2022.110071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 05/25/2022] [Accepted: 05/28/2022] [Indexed: 11/19/2022]
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3
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Hocq L, Pelloux J, Lefebvre V. Connecting Homogalacturonan-Type Pectin Remodeling to Acid Growth. TRENDS IN PLANT SCIENCE 2017; 22:20-29. [PMID: 27884541 DOI: 10.1016/j.tplants.2016.10.009] [Citation(s) in RCA: 119] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2016] [Revised: 10/20/2016] [Accepted: 10/25/2016] [Indexed: 05/18/2023]
Abstract
According to the 'acid growth theory', cell wall acidification controls cell elongation, therefore plant growth. This notably involves changes in cell wall mechanics through modifications of cell wall polysaccharide structure. Recently, advances in cell biology showed that changes in cell elongation rate can be mediated by the remodeling of pectins, and in particular of homogalacturonans (HGs). Their demethylesterification appears to be a key element controlling the chemistry and the rheology of the cell wall. We postulate that precise and dynamic modulation of extracellular pH plays a central role in the control of HG-modifying enzyme activities, and in particular those of pectin methylesterases and polygalacturonases. We propose that acid growth requires dynamic HG remodeling through the tight control of cell wall pH.
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Affiliation(s)
- Ludivine Hocq
- EA3900 Biologie des Plantes et Innovation (BIOPI), Structure Féderative de Recherche (SFR) Condorcet Centre National de la Recherche Scientifique (CNRS) 3417, Université de Picardie, 33 Rue St Leu, 80039 Amiens, France
| | - Jérôme Pelloux
- EA3900 Biologie des Plantes et Innovation (BIOPI), Structure Féderative de Recherche (SFR) Condorcet Centre National de la Recherche Scientifique (CNRS) 3417, Université de Picardie, 33 Rue St Leu, 80039 Amiens, France.
| | - Valérie Lefebvre
- EA3900 Biologie des Plantes et Innovation (BIOPI), Structure Féderative de Recherche (SFR) Condorcet Centre National de la Recherche Scientifique (CNRS) 3417, Université de Picardie, 33 Rue St Leu, 80039 Amiens, France.
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4
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Zega A, D'Ovidio R. Genome-wide characterization of pectin methyl esterase genes reveals members differentially expressed in tolerant and susceptible wheats in response to Fusarium graminearum. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2016; 108:1-11. [PMID: 27393991 DOI: 10.1016/j.plaphy.2016.06.033] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2016] [Revised: 06/27/2016] [Accepted: 06/27/2016] [Indexed: 05/20/2023]
Abstract
Pectin methyl esterase (PME) genes code for enzymes that are involved in structural modifications of the plant cell wall during plant growth and development. They are also involved in plant-pathogen interaction. PME genes belong to a multigene family and in this study we report the first comprehensive analysis of the PME gene family in bread wheat (Triticum aestivum L.). Like in other species, the members of the TaPME family are dispersed throughout the genome and their encoded products retain the typical structural features of PMEs. qRT-PCR analysis showed variation in the expression pattern of TaPME genes in different tissues and revealed that these genes are mainly expressed in flowering spikes. In our attempt to identify putative TaPME genes involved in wheat defense, we revealed a strong variation in the expression of the TaPME following Fusarium graminearum infection, the causal agent of Fusarium head blight (FHB). Particularly interesting was the finding that the expression profile of some PME genes was markedly different between the FHB-resistant wheat cultivar Sumai3 and the FHB-susceptible cultivar Bobwhite, suggesting a possible involvement of these PME genes in FHB resistance. Moreover, the expression analysis of the TaPME genes during F. graminearum progression within the spike revealed those genes that responded more promptly to pathogen invasion.
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Affiliation(s)
- Alessandra Zega
- Dipartimento di Scienze Agrarie e Forestali (DAFNE), Università della Tuscia, Via S. Camillo de Lellis snc, 01100, Viterbo, Italy
| | - Renato D'Ovidio
- Dipartimento di Scienze Agrarie e Forestali (DAFNE), Università della Tuscia, Via S. Camillo de Lellis snc, 01100, Viterbo, Italy.
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5
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Tundo S, Kalunke R, Janni M, Volpi C, Lionetti V, Bellincampi D, Favaron F, D'Ovidio R. Pyramiding PvPGIP2 and TAXI-III But Not PvPGIP2 and PMEI Enhances Resistance Against Fusarium graminearum. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2016; 29:629-639. [PMID: 27366923 DOI: 10.1094/mpmi-05-16-0089-r] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Plant protein inhibitors counteract the activity of cell wall-degrading enzymes (CWDEs) secreted by pathogens to breach the plant cell-wall barrier. Transgenic plants expressing a single protein inhibitor restrict pathogen infections. However, since pathogens secrete a number of CWDEs at the onset of infection, we combined more inhibitors in a single wheat genotype to reinforce further the cell-wall barrier. We combined polygalacturonase (PG) inhibiting protein (PGIP) and pectin methyl esterase inhibitor (PMEI), both controlling the activity of PG, one of the first CWDEs secreted during infection. We also pyramided PGIP and TAXI-III, a xylanase inhibitor that controls the activity of xylanases, key factors for the degradation of xylan, a main component of cereal cell wall. We demonstrated that the pyramiding of PGIP and PMEI did not contribute to any further improvement of disease resistance. However, the presence of both pectinase inhibitors ensured a broader spectrum of disease resistance. Conversely, the PGIP and TAXI-III combination contributed to further improvement of Fusarium head blight (FHB) resistance, probably because these inhibitors target the activity of different types of CWDEs, i.e., PGs and xylanases. Worth mentioning, the reduction of FHB symptoms is accompanied by a reduction of deoxynivalenol accumulation with a foreseen great benefit to human and animal health.
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Affiliation(s)
- Silvio Tundo
- 1 Dipartimento di Scienze Agrarie e Forestali (DAFNE) Università della Tuscia, Via S. Camillo de Lellis snc, 01100 Viterbo
| | - Raviraj Kalunke
- 1 Dipartimento di Scienze Agrarie e Forestali (DAFNE) Università della Tuscia, Via S. Camillo de Lellis snc, 01100 Viterbo
| | - Michela Janni
- 1 Dipartimento di Scienze Agrarie e Forestali (DAFNE) Università della Tuscia, Via S. Camillo de Lellis snc, 01100 Viterbo
| | - Chiara Volpi
- 1 Dipartimento di Scienze Agrarie e Forestali (DAFNE) Università della Tuscia, Via S. Camillo de Lellis snc, 01100 Viterbo
| | - Vincenzo Lionetti
- 2 Dipartimento di Biologia e Biotecnologie "Charles Darwin", Sapienza Università di Roma, Piazzale Aldo Moro, 5, 00185 Roma, Italy; and
| | - Daniela Bellincampi
- 2 Dipartimento di Biologia e Biotecnologie "Charles Darwin", Sapienza Università di Roma, Piazzale Aldo Moro, 5, 00185 Roma, Italy; and
| | - Francesco Favaron
- 3 Dipartimento Territorio e Sistemi Agro-Forestali (TeSAF), Research group in Plant Pathology, Università di Padova, Viale dell'Università 16, 35020 Legnaro (PD), Italy
| | - Renato D'Ovidio
- 1 Dipartimento di Scienze Agrarie e Forestali (DAFNE) Università della Tuscia, Via S. Camillo de Lellis snc, 01100 Viterbo
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Liu W, Liu Y, Zhu R, Yu J, Lu W, Pan C, Yao W, Gao X. Structure characterization, chemical and enzymatic degradation, and chain conformation of an acidic polysaccharide from Lycium barbarum L. Carbohydr Polym 2016; 147:114-124. [PMID: 27178915 DOI: 10.1016/j.carbpol.2016.03.087] [Citation(s) in RCA: 130] [Impact Index Per Article: 16.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2016] [Revised: 03/26/2016] [Accepted: 03/28/2016] [Indexed: 12/19/2022]
Abstract
An acidic polysaccharide, named as p-LBP, was isolated from Lycium barbarum L. by water extraction and purified by decoloration, ion exchange chromatography, dialysis and gel chromatography, successively. The primary structure analysis was determined by HPAEC-PAD, HPSEC, FT-IR, GC-MS, and NMR. The results showed p-LBP was a homogeneous heteropolysaccharide as a pectin molecule with an average molecular weight of 64kDa p-LBP was an approximately 87nm hollow sphere in 0.05mol/L sodium sulfate solution determined by HPSEC-MALLS, DLS and TEM. A discussion of degradation patterns gave the detailed structural information of p-LBP. Therefore, the results from degraded fragments elucidated that the backbone of p-LBP was formed by →4-α-GalpA-(1→, repeatedly. Partial region was connected by →4-α-GalpA-(1→ and →2-α-Rhap-(1→, alternatively. On the C-4 of partial →2-α-Rhap-(1→ residues existed branches forming by →4-β-Galp-(1→, →3-β-Galp-(1→ or →5-α-Araf-(1→, while on the C-6 of partial →3-β-Galp-(1→ residues existed secondary branches forming by terminal-α-Araf, terminal-β-Galp or →3-α-Araf-(1→.
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Affiliation(s)
- Wei Liu
- State Key Laboratory of Natural Medicines, School of Life Science and Technology, China Pharmaceutical University, Nanjing 210009, PR China
| | - Yameng Liu
- State Key Laboratory of Natural Medicines, School of Life Science and Technology, China Pharmaceutical University, Nanjing 210009, PR China
| | - Rui Zhu
- State Key Laboratory of Natural Medicines, School of Life Science and Technology, China Pharmaceutical University, Nanjing 210009, PR China
| | - Juping Yu
- State Key Laboratory of Natural Medicines, School of Life Science and Technology, China Pharmaceutical University, Nanjing 210009, PR China
| | - Weisheng Lu
- State Key Laboratory of Natural Medicines, School of Life Science and Technology, China Pharmaceutical University, Nanjing 210009, PR China
| | - Chun Pan
- Department of Critical Care Medicine, Zhongda Hospital, Southeast University, Nanjing 210009, PR China
| | - Wenbing Yao
- State Key Laboratory of Natural Medicines, School of Life Science and Technology, China Pharmaceutical University, Nanjing 210009, PR China.
| | - Xiangdong Gao
- State Key Laboratory of Natural Medicines, School of Life Science and Technology, China Pharmaceutical University, Nanjing 210009, PR China.
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7
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Giancaspro A, Giove SL, Zito D, Blanco A, Gadaleta A. Mapping QTLs for Fusarium Head Blight Resistance in an Interspecific Wheat Population. FRONTIERS IN PLANT SCIENCE 2016; 7:1381. [PMID: 27746787 PMCID: PMC5040704 DOI: 10.3389/fpls.2016.01381] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2016] [Accepted: 08/30/2016] [Indexed: 05/20/2023]
Abstract
Fusarium head blight (scab) is one of the most widespread and damaging diseases of wheat, causing grain yield and quality losses and production of harmful mycotoxins. Development of resistant varieties is hampered by lack of effective resistance sources in the tetraploid wheat primary gene pool. Here we dissected the genetic basis of resistance in a new durum wheat (Triticum turgidum ssp. durum) Recombinant inbred lines (RILs) population obtained by crossing an hexaploid resistant line and a durum susceptible cultivar. A total of 135 RILs were used for constituting a genetic linkage map and mapping loci for head blight incidence, severity, and disease-related plant morphological traits (plant height, spike compactness, and awn length). The new genetic map accounted for 4,366 single nucleotide polymorphism markers assembled in 52 linkage groups covering a total length of 4,227.37 cM. Major quantitative trait loci (QTL) for scab incidence and severity were mapped on chromosomes 2AS, 3AL, and 2AS, 2BS, 4BL, respectively. Plant height loci were identified on 3A, 3B, and 4B, while major QTL for ear compactness were found on 4A, 5A, 5B, 6A, and 7A. In this work, resistance to Fusarium was transferred from hexaploid to durum wheat, and correlations between the disease and morphological traits were assessed.
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Affiliation(s)
- Angelica Giancaspro
- Department of Agricultural and Environmental Sciences, Research Unit of “Genetics and Plant Biotechnology”, University of Bari Aldo MoroBari, Italy
| | - Stefania L. Giove
- Department of Agricultural and Environmental Sciences, Research Unit of “Genetics and Plant Biotechnology”, University of Bari Aldo MoroBari, Italy
| | - Daniela Zito
- Department of Soil, Plant and Food Sciences, Section of Genetics and Plant Breeding, University of Bari Aldo MoroBari, Italy
| | - A. Blanco
- Department of Soil, Plant and Food Sciences, Section of Genetics and Plant Breeding, University of Bari Aldo MoroBari, Italy
| | - Agata Gadaleta
- Department of Agricultural and Environmental Sciences, Research Unit of “Genetics and Plant Biotechnology”, University of Bari Aldo MoroBari, Italy
- *Correspondence: Agata Gadaleta,
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8
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Giancaspro A, Giove SL, Zito D, Blanco A, Gadaleta A. Mapping QTLs for Fusarium Head Blight Resistance in an Interspecific Wheat Population. FRONTIERS IN PLANT SCIENCE 2016. [PMID: 27746787 DOI: 10.3389/fpls.2016.0138124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Fusarium head blight (scab) is one of the most widespread and damaging diseases of wheat, causing grain yield and quality losses and production of harmful mycotoxins. Development of resistant varieties is hampered by lack of effective resistance sources in the tetraploid wheat primary gene pool. Here we dissected the genetic basis of resistance in a new durum wheat (Triticum turgidum ssp. durum) Recombinant inbred lines (RILs) population obtained by crossing an hexaploid resistant line and a durum susceptible cultivar. A total of 135 RILs were used for constituting a genetic linkage map and mapping loci for head blight incidence, severity, and disease-related plant morphological traits (plant height, spike compactness, and awn length). The new genetic map accounted for 4,366 single nucleotide polymorphism markers assembled in 52 linkage groups covering a total length of 4,227.37 cM. Major quantitative trait loci (QTL) for scab incidence and severity were mapped on chromosomes 2AS, 3AL, and 2AS, 2BS, 4BL, respectively. Plant height loci were identified on 3A, 3B, and 4B, while major QTL for ear compactness were found on 4A, 5A, 5B, 6A, and 7A. In this work, resistance to Fusarium was transferred from hexaploid to durum wheat, and correlations between the disease and morphological traits were assessed.
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Affiliation(s)
- Angelica Giancaspro
- Department of Agricultural and Environmental Sciences, Research Unit of "Genetics and Plant Biotechnology", University of Bari Aldo Moro Bari, Italy
| | - Stefania L Giove
- Department of Agricultural and Environmental Sciences, Research Unit of "Genetics and Plant Biotechnology", University of Bari Aldo Moro Bari, Italy
| | - Daniela Zito
- Department of Soil, Plant and Food Sciences, Section of Genetics and Plant Breeding, University of Bari Aldo Moro Bari, Italy
| | - A Blanco
- Department of Soil, Plant and Food Sciences, Section of Genetics and Plant Breeding, University of Bari Aldo Moro Bari, Italy
| | - Agata Gadaleta
- Department of Agricultural and Environmental Sciences, Research Unit of "Genetics and Plant Biotechnology", University of Bari Aldo Moro Bari, Italy
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Lionetti V, Giancaspro A, Fabri E, Giove SL, Reem N, Zabotina OA, Blanco A, Gadaleta A, Bellincampi D. Cell wall traits as potential resources to improve resistance of durum wheat against Fusarium graminearum. BMC PLANT BIOLOGY 2015; 15:6. [PMID: 25597920 PMCID: PMC4298115 DOI: 10.1186/s12870-014-0369-1] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2014] [Accepted: 12/05/2014] [Indexed: 05/21/2023]
Abstract
BACKGROUND Fusarium graminearum, one of the causal agents of Fusarium Head Blight (FHB, scab), leads to severe losses in grain yield and quality due to the production of mycotoxins which are harmful to human and livestock. Different traits for FHB resistance in wheat were identified for common wheat (Triticum aestivum L.) while the sources of FHB resistance in durum wheat (Triticum turgidum ssp. Durum), one of the cereals most susceptible to F. graminearum infection, have not been found. New lines of evidence indicate that content and composition of cell wall polymers affect the susceptibility of the wall to degrading enzymes produced by pathogens during infection and can play a role in the outcome of host-pathogen interactions. The objective of our research is to identify potential cell wall biochemical traits linked to Fusariosis resistance to be transferred from a resistant common wheat to a susceptible durum wheat line. RESULTS A detailed analysis of cell wall composition in spikes isolated from a highly resistant common wheat accession "02-5B-318", a breeding line derived from the FHB-resistant Chinese cv. Sumai-3 and a high susceptible durum wheat cv. Saragolla was performed. Significant differences in lignin monolignols composition, arabinoxylan (AX) substitutions and pectin methylesterification were found between resistant and susceptible plants. We isolated and characterized a pectin methylesterase gene WheatPME1, which we found being down regulated in the FHB-resistant line and induced by fungal infection in the susceptible wheat. CONCLUSIONS Our results indicate cell wall traits differing between the FHB sensitive and resistant wheat genotypes, possibly related to FHB-resistance, and identify the line 02-5B-318R as a potential resource of such traits. Evidence suggests that WheatPME1 is involved in wheat response to F. graminearum.
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Affiliation(s)
- Vincenzo Lionetti
- />Dipartimento di Biologia e Biotecnologie “Charles Darwin”, Sapienza Università di Roma, Rome, Italy
| | - Angelica Giancaspro
- />Department of Soil, Plant and Food Science (DiSSPA), University of Bari “Aldo Moro”, Via G. Amendola 165/A - 70126, Bari, Italy
| | - Eleonora Fabri
- />Dipartimento di Biologia e Biotecnologie “Charles Darwin”, Sapienza Università di Roma, Rome, Italy
| | - Stefania L Giove
- />Department of Soil, Plant and Food Science (DiSSPA), University of Bari “Aldo Moro”, Via G. Amendola 165/A - 70126, Bari, Italy
| | - Nathan Reem
- />Roy J. Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, Iowa 50011 USA
| | - Olga A Zabotina
- />Roy J. Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, Iowa 50011 USA
| | - Antonio Blanco
- />Department of Soil, Plant and Food Science (DiSSPA), University of Bari “Aldo Moro”, Via G. Amendola 165/A - 70126, Bari, Italy
| | - Agata Gadaleta
- />Department of Soil, Plant and Food Science (DiSSPA), University of Bari “Aldo Moro”, Via G. Amendola 165/A - 70126, Bari, Italy
| | - Daniela Bellincampi
- />Dipartimento di Biologia e Biotecnologie “Charles Darwin”, Sapienza Università di Roma, Rome, Italy
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Sénéchal F, Wattier C, Rustérucci C, Pelloux J. Homogalacturonan-modifying enzymes: structure, expression, and roles in plants. JOURNAL OF EXPERIMENTAL BOTANY 2014; 65:5125-60. [PMID: 25056773 PMCID: PMC4400535 DOI: 10.1093/jxb/eru272] [Citation(s) in RCA: 155] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2014] [Revised: 05/20/2014] [Accepted: 05/22/2014] [Indexed: 05/18/2023]
Abstract
Understanding the changes affecting the plant cell wall is a key element in addressing its functional role in plant growth and in the response to stress. Pectins, which are the main constituents of the primary cell wall in dicot species, play a central role in the control of cellular adhesion and thereby of the rheological properties of the wall. This is likely to be a major determinant of plant growth. How the discrete changes in pectin structure are mediated is thus a key issue in our understanding of plant development and plant responses to changes in the environment. In particular, understanding the remodelling of homogalacturonan (HG), the most abundant pectic polymer, by specific enzymes is a current challenge in addressing its fundamental role. HG, a polymer that can be methylesterified or acetylated, can be modified by HGMEs (HG-modifying enzymes) which all belong to large multigenic families in all species sequenced to date. In particular, both the degrees of substitution (methylesterification and/or acetylation) and polymerization can be controlled by specific enzymes such as pectin methylesterases (PMEs), pectin acetylesterases (PAEs), polygalacturonases (PGs), or pectate lyases-like (PLLs). Major advances in the biochemical and functional characterization of these enzymes have been made over the last 10 years. This review aims to provide a comprehensive, up to date summary of the recent data concerning the structure, regulation, and function of these fascinating enzymes in plant development and in response to biotic stresses.
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Affiliation(s)
- Fabien Sénéchal
- EA3900 BIOPI Biologie des Plantes et Innovation, Université de Picardie Jules Verne, 33 Rue St Leu, F-80039 Amiens, France
| | - Christopher Wattier
- EA3900 BIOPI Biologie des Plantes et Innovation, Université de Picardie Jules Verne, 33 Rue St Leu, F-80039 Amiens, France
| | - Christine Rustérucci
- EA3900 BIOPI Biologie des Plantes et Innovation, Université de Picardie Jules Verne, 33 Rue St Leu, F-80039 Amiens, France
| | - Jérôme Pelloux
- EA3900 BIOPI Biologie des Plantes et Innovation, Université de Picardie Jules Verne, 33 Rue St Leu, F-80039 Amiens, France
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11
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Rafińska K, Świdziński M, Bednarska-Kozakiewicz E. Homogalacturonan deesterification during pollen-ovule interaction in Larix decidua Mill.: an immunocytochemical study. PLANTA 2014; 240:195-208. [PMID: 24793355 PMCID: PMC4065381 DOI: 10.1007/s00425-014-2074-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2013] [Accepted: 04/01/2014] [Indexed: 05/07/2023]
Abstract
Studies on angiosperm plants have shown that homogalacturonan present in the extracellular matrix of pistils plays an important role in the interaction with the male gametophyte. However, in gymnosperms, knowledge on the participation of HG in the pollen-ovule interaction is limited, and only a few studies on male gametophytes have been reported. Thus, the aim of this study was to determine the distribution of HG in male gametophytes and ovules during their interaction in Larix decidua Mill. The distribution of HG in pollen grains and unpollinated and pollinated ovules was investigated by immunofluorescence techniques using monoclonal antibodies that recognise high methyl-esterified HG (JIM7), low methyl-esterified HG (JIM5) and calcium cross-linked HG (2F4). All studied categories of HG were detected in the ovule. Highly methyl-esterified HG was present in the cell walls of all cells throughout the interaction; however, the distribution of low methyl-esterified and calcium cross-linked HG changed during the course of interaction. Both of these categories of HG appeared only in the apoplast and the extracellular matrix of the ovule tissues, which interact with the male gametophyte. This finding suggests that in L. decidua, low methyl-esterified and calcium cross-linked HG play an important role in pollen-ovule interaction. The last category of HG is most likely involved in adhesion between the pollen and the ovule and might provide an optimal calcium environment for pollen grain germination and pollen tube growth.
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Affiliation(s)
- Katarzyna Rafińska
- Department of Cell Biology, Faculty of Biology and Environment Protection, Nicolaus Copernicus University, Lwowska 1, 87-100 Toruń, Poland
| | - Michał Świdziński
- Department of Cell Biology, Faculty of Biology and Environment Protection, Nicolaus Copernicus University, Lwowska 1, 87-100 Toruń, Poland
| | - Elżbieta Bednarska-Kozakiewicz
- Department of Cell Biology, Faculty of Biology and Environment Protection, Nicolaus Copernicus University, Lwowska 1, 87-100 Toruń, Poland
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12
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Microfluidics assisted generation of innovative polysaccharide hydrogel microparticles. Carbohydr Polym 2014; 116:189-99. [PMID: 25458289 DOI: 10.1016/j.carbpol.2014.01.083] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2013] [Revised: 01/20/2014] [Accepted: 01/24/2014] [Indexed: 11/21/2022]
Abstract
Capillary flow-based approach such as microfluidic devices offer a number of advantages over conventional flow control technology because they ensure highly versatile geometry and can be used to produce monodisperse spherical and non-spherical polymeric microparticles. Based on the principle of a flow-focusing device to emulsify the coflow of aqueous solutions in an organic phase, we were able to produce the following innovative polysaccharide hydrogel microparticles: - Janus hydrogel microparticles made of pectin–pectin (homo Janus) and pectin–alginate (hetero Janus) were produced. The efficiency of separation of the two hemispheres was investigated by confocal scanning laser microscopy (CSLM) of previously labelled biopolymers. The Janus structure was confirmed by subjecting each microparticle hemisphere to specific enzymatic degradation. As a proof of concept, free BSA or BSA grafted with dextran, were encapsulated in each hemisphere of the hetero Janus hydrogel microparticles. While BSA, free or grafted with dextran, was always confined in the alginate hemisphere, a fraction of BSA diffused from the pectin to the alginate hemisphere. Methoxy groups along the pectin chain will be responsible of the decrease of the number of attractive electrostatic interactions occurring between amino groups of BSA and carboxylic groups of pectin. - Pectin hydrogel microparticles of complex shapes were successfully produced by combining on-chip the phenomenon of gelation and water diffusion induced self-assembly, using dimethyl carbonate as continuous phase, or by deformation of the pre-gelled droplets off-chip at a fluid–fluid interface. Sphere, oblate ellipsoid, torus or mushroom-type morphologies were thus obtained. Moreover, it was established that after crossing the interface during their collect, mushroom-type microparticles did not migrate in the calcium or DMC phase but stayed at the liquid–liquid interface. These new and original hydrogel microparticles will open up opportunities for studying relationships between combined enzymatic hydrolysis and active release for Janus particles and relationships between shape and swelling behaviour for anisotropic pectin microparticles.
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Volpi C, Raiola A, Janni M, Gordon A, O'Sullivan DM, Favaron F, D'Ovidio R. Claviceps purpurea expressing polygalacturonases escaping PGIP inhibition fully infects PvPGIP2 wheat transgenic plants but its infection is delayed in wheat transgenic plants with increased level of pectin methyl esterification. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2013; 73:294-301. [PMID: 24184449 DOI: 10.1016/j.plaphy.2013.10.011] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2013] [Accepted: 10/10/2013] [Indexed: 05/21/2023]
Abstract
Claviceps purpurea is a biotrophic fungal pathogen of grasses causing the ergot disease. The infection process of C. purpurea on rye flowers is accompanied by pectin degradation and polygalacturonase (PG) activity represents a pathogenicity factor. Wheat is also infected by C. purpurea and we tested whether the presence of polygalacturonase inhibiting protein (PGIP) can affect pathogen infection and ergot disease development. Wheat transgenic plants expressing the bean PvPGIP2 did not show a clear reduction of disease symptoms when infected with C. purpurea. To ascertain the possible cause underlying this lack of improved resistance of PvPGIP2 plants, we expressed both polygalacturonases present in the C. purpurea genome, cppg1 and cppg2 in Pichia pastoris. In vitro assays using the heterologous expressed PGs and PvPGIP2 showed that neither PG is inhibited by this inhibitor. To further investigate the role of PG in the C. purpurea/wheat system, we demonstrated that the activity of both PGs of C. purpurea is reduced on highly methyl esterified pectin. Finally, we showed that this reduction in PG activity is relevant in planta, by inoculating with C. purpurea transgenic wheat plants overexpressing a pectin methyl esterase inhibitor (PMEI) and showing a high degree of pectin methyl esterification. We observed reduced disease symptoms in the transgenic line compared with null controls. Together, these results highlight the importance of pectin degradation for ergot disease development in wheat and sustain the notion that inhibition of pectin degradation may represent a possible route to control of ergot in cereals.
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Affiliation(s)
- Chiara Volpi
- Dipartimento di Scienze e tecnologie per l'Agricoltura, le Foreste, la Natura e l'Energia (DAFNE), Università della Tuscia, Via S. Camillo de Lellis snc, 01100 Viterbo, Italy
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Bonnin E, Garnier C, Ralet MC. Pectin-modifying enzymes and pectin-derived materials: applications and impacts. Appl Microbiol Biotechnol 2013; 98:519-32. [DOI: 10.1007/s00253-013-5388-6] [Citation(s) in RCA: 78] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2013] [Revised: 11/05/2013] [Accepted: 11/05/2013] [Indexed: 11/30/2022]
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Ralet MC, Williams MAK, Tanhatan-Nasseri A, Ropartz D, Quéméner B, Bonnin E. Innovative enzymatic approach to resolve homogalacturonans based on their methylesterification pattern. Biomacromolecules 2012; 13:1615-24. [PMID: 22520025 DOI: 10.1021/bm300329r] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Three series of model homogalacturonans (HGs) covering a large range of degree of methylesterification (DM) were prepared by chemical and/or enzymatic means. Randomly demethylesterified HGs, HGs containing a few long demethylesterified galacturonic acid stretches, and HGs with numerous but short demethylesterified blocks were recovered. The analysis of the degradation products generated by the action of a purified pectin lyase allowed the definition of two new parameters, the degree of blockiness, and the absolute degree of blockiness of the highly methylesterified stretches (DBMe and DB(abs)Me, respectively). By combining this information with that obtained by the more traditional endopolygalacturonase digestion, the total proportion of degradable zones for a given DM was measured and was shown to permit a clear differentiation of the three types of HG series over a large range of DM. This double enzymatic approach will be of interest to discriminate industrial pectin samples exhibiting different functionalities and to evaluate pectin fine structure dynamics in vivo in the plant cell wall, where pectin plays a key mechanical role.
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Affiliation(s)
- Marie-Christine Ralet
- INRA, UR1268 Biopolymères Interactions Assemblages, rue de la Géraudière, BP 71627, F-44300 Nantes, France.
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Marquis M, Renard D, Cathala B. Microfluidic generation and selective degradation of biopolymer-based Janus microbeads. Biomacromolecules 2012; 13:1197-203. [PMID: 22401572 DOI: 10.1021/bm300159u] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
We describe a microfluidic approach for generating Janus microbeads from biopolymer hydrogels. A flow-focusing device was used to emulsify the coflow of aqueous solutions of one or two different biopolymers in an organic phase to synthesize homo or hetero Janus microbeads. Biopolymer gelation was initiated, in the chip, by diffusion-controlled ionic cross-linking of the biopolymers. Pectin-pectin (homo Janus) and, for the first time, pectin-alginate (hetero Janus) microbeads were produced. The efficiency of separation of the two hemispheres, which reflected mixing and convection phenomena, was investigated by confocal scanning laser microscopy (CSLM) of previously labeled biopolymers. The interface of the hetero Janus structure was clearly defined, whereas that of the homo Janus microbeads was poorly defined. The Janus structure was confirmed by subjecting each microbead hemisphere to specific enzymatic degradation. These new and original microbeads from renewable resources will open up opportunities for studying relationships between combined enzymatic hydrolysis and active compound release.
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Affiliation(s)
- Mélanie Marquis
- INRA, UR1268 Biopolymères Interactions Assemblages, Nantes, France.
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Rocchi V, Janni M, Bellincampi D, Giardina T, D'Ovidio R. Intron retention regulates the expression of pectin methyl esterase inhibitor (Pmei) genes during wheat growth and development. PLANT BIOLOGY (STUTTGART, GERMANY) 2012; 14:365-73. [PMID: 21972933 DOI: 10.1111/j.1438-8677.2011.00508.x] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Pectin is an important component of the plant cell wall and its remodelling occurs during normal plant growth or following stress responses. Pectin is secreted into the cell wall in a highly methyl-esterified form and subsequently de-methyl-esterified by pectin methyl esterase (PME), whose activity is controlled by the pectin methyl esterase inhibitor protein (PMEI). Cereal cell wall contains a low amount of pectin; nonetheless the level and pattern of pectin methyl esterification play a primary role during development or pathogen infection. Since few data are available on the role of PMEI in plant development and defence of cereal species, we isolated and characterised three Pmei genes (Tdpmei2.1, Tdpmei2.2 and Tdpmei3) and their encoded products in wheat. Sequence comparisons showed a low level of intra- and inter-specific sequence conservation of PMEIs. Tdpmei2.1 and Tdpmei2.2 share 94% identity at protein level, but only 20% identity with the product of Tdpmei3. All three Tdpmei genes code for functional inhibitors of plant PMEs and do not inhibit microbial PMEs or a plant invertase. RT-PCR analyses demonstrated, for the first time to our knowledge, that Pmei genes are regulated by intron retention. Processed and unprocessed transcripts of Tdpmei2.1 and Tdpmei2.2 accumulated in several organs, but anthers contained only mature transcripts. Tdpmei3 lacks introns and its transcript accumulated mainly in stem internodes. These findings suggest that products encoded by these Tdpmei genes control organ- or tissue-specific activity of specific PME isoforms in wheat.
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Affiliation(s)
- V Rocchi
- Dipartimento di Scienze e Tecnologie per l'Agricoltura, le Foreste, la Natura e l'Energia, DAFNE, Università della Tuscia, Viterbo, Italy
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Jurick WM, Vico I, Gaskins VL, Whitaker BD, Garrett WM, Janisiewicz WJ, Conway WS. Penicillium solitum produces a polygalacturonase isozyme in decayed Anjou pear fruit capable of macerating host tissue in vitro. Mycologia 2012; 104:604-12. [PMID: 22241612 DOI: 10.3852/11-119] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
A polygalacturonase (PG) isozyme was isolated from Penicillium solitum-decayed Anjou pear fruit and purified to homogeneity with a multistep process. Both gel filtration and cation exchange chromatography revealed a single PG activity peak, and analysis of the purified protein showed a single band with a molecular mass of 43 kDa, which is of fungal origin. The purified enzyme was active from pH 3.5-6, with an optimum at pH 4.5. PG activity was detectable 0-70 C with 50 C maximum. The purified isozyme was inhibited by the divalent cations Ca(2+), Mg(2+), Mn(2+) and Fe(2+) and analysis of enzymatic hydrolysis products revealed polygalacturonic acid monomers and oligomers. The purified enzyme has an isoelectric point of 5.3 and is not associated with a glycosylated protein. The PG isozyme macerated fruit tissue plugs in vitro and produced ~1.2-fold more soluble polyuronides from pear than from apple tissue, which further substantiates the role of PG in postharvest decay. Data from this study show for the first time that the purified PG produced in decayed Anjou pear by P. solitum, a weakly virulent fungus, is different from that PG produced by the same fungus in decayed apple.
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Affiliation(s)
- Wayne M Jurick
- USDA-ARS, Food Quality Laboratory, Beltsville, MD 20705, USA.
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Normand J, Bonnin E, Delavault P. Cloning and expression in Pichia pastoris of an Irpex lacteus rhamnogalacturonan hydrolase tolerant to acetylated rhamnogalacturonan. Appl Microbiol Biotechnol 2011; 94:1543-52. [PMID: 22101785 DOI: 10.1007/s00253-011-3705-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2011] [Revised: 10/19/2011] [Accepted: 11/02/2011] [Indexed: 12/01/2022]
Abstract
In order to produce a recombinant rhamnogalacturonase from the basidiomycete Irpex lacteus using a molecular approach, PCR primers were designed based on a sequence alignment of four known ascomycete rhamnogalacturonases. Using 5' and 3' rapid amplification of cDNA ends (RACE) experiments, a 1,437-bp full-length cDNA containing an open reading frame of 1,329 bp was isolated. The corresponding putative protein sequence is of 443 amino acids and contains a secretion signal sequence of 22 amino acids. The theoretical mass of this protein is 44.6 kDa with a theoretical isoelectric point of 6.2. The amino acid sequence shared not only significant identities with ascomycete and basidiomycete putative rhamnogalacturonases but also complete similarity with peptides obtained from a recently purified rhamnogalacturonase from I. lacteus. The recombinant protein was successfully expressed in active form in Pichia pastoris. SDS-PAGE assay demonstrated that the recombinant enzyme was secreted in the culture medium and had a molar mass of 56 kDa. This recombinant rhamnogalacturonan hydrolase exhibited a pH optimum between 4.5 and 5 and a temperature optimum between 40°C and 50°C, which correspond to that of the native rhamnogalacturonase from I. lacteus. The study of its specificity through reaction products analysis showed that it was highly tolerant to the presence of acetyl groups on its substrate, even more than the native enzyme.
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Affiliation(s)
- J Normand
- INRA, Unité de Recherche Biopolymères, Interactions, Assemblages, BP 71627, 44316 Nantes Cedex 03, France
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Lenartowska M, Krzesłowska M, Bednarska E. Pectin dynamic and distribution of exchangeable Ca2+ in Haemanthus albiflos hollow style during pollen-pistil interactions. PROTOPLASMA 2011; 248:695-705. [PMID: 21052747 DOI: 10.1007/s00709-010-0231-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2010] [Accepted: 10/21/2010] [Indexed: 05/07/2023]
Abstract
In this report, the localization and spatial distribution of two categories of pectin, high and low methylesterified, on the background of dynamic in loosely bound calcium (Ca(2+)) in Haemanthus hollow style were studied before and after pollination. In the style transmitting tract of unpollinated pistil, mainly high-methylesterified pectins were present, both in the transmitting tract epidermis and in the style canal. After pollination, an increase in the level of two investigated categories of pectin was observed, but the amount of high-methylesterified one in each period of time analyzed was permanently higher. Locally, in the regions of the style canal penetrated by pollen tubes, process of pectin de-esterification was initiated. However, pollination caused an increase of loosely bound Ca(2+) level in the style transmitting tract, this process appears to be not linked with pectin de-esterification and possible Ca(2+) release after the lysis of Ca(2+) cross-linked de-esterified pectin. Instead, it seems to be based on Ca(2+) exocytosis from the transmitting tract epidermis cells providing a source of Ca(2+) for pollen tubes growing in Haemanthus hollow style.
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Affiliation(s)
- Marta Lenartowska
- Laboratory of Developmental Biology, Faculty of General and Molecular Biology, Nicolaus Copernicus University, Gagarina 9, 87-100, Toruń, Poland.
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Volpi C, Janni M, Lionetti V, Bellincampi D, Favaron F, D'Ovidio R. The ectopic expression of a pectin methyl esterase inhibitor increases pectin methyl esterification and limits fungal diseases in wheat. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2011; 24:1012-9. [PMID: 21585271 DOI: 10.1094/mpmi-01-11-0021] [Citation(s) in RCA: 66] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Cell wall pectin methyl esterification can influence plant resistance because highly methyl-esterified pectin can be less susceptible to the hydrolysis by pectic enzymes such as fungal endopolygalacturonases (PG). Pectin is secreted into the cell wall in a highly methyl-esterified form and, here, is de-methyl esterified by pectin methyl esterase (PME). The activity of PME is controlled by specific protein inhibitors called PMEI; consequently, an increased inhibition of PME by PMEI might modify the pectin methyl esterification. In order to test the possibility of improving wheat resistance by modifying the methyl esterification of pectin cell wall, we have produced durum wheat transgenic lines expressing the PMEI from Actinidia chinensis (AcPMEI). The expression of AcPMEI endows wheat with a reduced endogenous PME activity, and transgenic lines expressing a high level of the inhibitor showed a significant increase in the degree of methyl esterification. These lines showed a significant reduction of disease symptoms caused by the fungal pathogens Bipolaris sorokiniana or Fusarium graminearum. This increased resistance was related to the impaired ability of these fungal pathogens to grow on methyl-esterified pectin and to a reduced activity of the fungal PG to hydrolyze methyl-esterified pectin. In addition to their importance for wheat improvement, these results highlight the primary role of pectin despite its low content in the wheat cell wall.
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Affiliation(s)
- Chiara Volpi
- Department of Agrobiology and Agrochemistry, University of Tuscia, Viterbo, Italy
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Tanhatan-Nasseri A, Crépeau MJ, Thibault JF, Ralet MC. Isolation and characterization of model homogalacturonans of tailored methylesterification patterns. Carbohydr Polym 2011. [DOI: 10.1016/j.carbpol.2011.06.019] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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23
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Microbial utilization and selectivity of pectin fractions with various structures. Appl Environ Microbiol 2011; 77:5747-54. [PMID: 21724897 DOI: 10.1128/aem.00179-11] [Citation(s) in RCA: 81] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
To evaluate the fermentation properties of oligosaccharides derived from pectins and their parent polysaccharides, a 5-ml-working-volume, pH- and temperature-controlled fermentor was tested. Six pectic oligosaccharides representing specific substructures found within pectins were prepared. These consisted of oligogalacturonides (average degrees of polymerization [DP] of 5 and 9), methylated oligogalacturonides (average DP of 5), oligorhamnogalacturonides (average DP of 10 as a disaccharide unit of galacturonic acid and rhamnose), oligogalactosides (average DP of 5), and oligoarabinosides (average DP of 6). The influence of these carbohydrates on the human fecal microbiota was evaluated. Use of neutral sugar fractions resulted in an increase in Bifidobacterium populations and gave higher organic acid yields. The Bacteroides-Prevotella group significantly increased on all oligosaccharides except oligogalacturonides with an average DP of 5. The most selective substrates for bifidobacteria were arabinan, galactan, oligoarabinosides, and oligogalactosides.
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Morris GA, Ralet MC, Bonnin E, Thibault JF, Harding SE. Physical characterisation of the rhamnogalacturonan and homogalacturonan fractions of sugar beet (Beta vulgaris) pectin. Carbohydr Polym 2010. [DOI: 10.1016/j.carbpol.2010.06.049] [Citation(s) in RCA: 83] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Ralet MC, Lerouge P, Quéméner B. Mass spectrometry for pectin structure analysis. Carbohydr Res 2009; 344:1798-807. [DOI: 10.1016/j.carres.2008.08.036] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2008] [Revised: 08/27/2008] [Accepted: 08/29/2008] [Indexed: 01/01/2023]
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Jurick WM, Vico I, McEvoy JL, Whitaker BD, Janisiewicz W, Conway WS. Isolation, purification, and characterization of a polygalacturonase produced in Penicillium solitum-decayed 'Golden Delicious' apple fruit. PHYTOPATHOLOGY 2009; 99:636-641. [PMID: 19453221 DOI: 10.1094/phyto-99-6-0636] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Polygalacturonase (PG) was extracted and purified from decayed 'Golden Delicious' apple fruit inoculated with Penicillium solitum. Ammonium sulfate, gel filtration, and cation exchange chromatography were used to purify the enzyme. Both chromatographic methods revealed a single peak corresponding to PG activity. The purified PG most likely originates from the fungus because PG activity from healthy and wounded apple tissue was undetectable. Analysis of cation exchange-purified material using sodium dodecyl sulfate polyacrylamide gel electrophoresis revealed a single 50-kDa band. The enzyme was active over a broad pH range (3 to 7), with optimal activity between pH 4 and 5. PG was highly active at 20 and 37 degrees C but was also detectable at 2, 50, and 75 degrees C. Divalent cations affected PG enzyme activity; Mg and Fe increased, whereas Ca and Mn reduced activity in vitro. Thin-layer chromatographic separation of hydrolysis products and data from a PG plate activity assay based on staining with ruthenium red showed that the enzyme exhibits both exo and endo activity. Purified PG incubated with intact apple fruit tissue in vitro caused a 30% reduction in mass after 48 h, suggesting a role in P. solitum-mediated decay of apple fruit.
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Affiliation(s)
- Wayne M Jurick
- Food Quality Laboratory, United States Department of Agriculture-Agricultural Research Service (USDA-ARS), BARC-West, Beltsville, MD, USA.
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André-Leroux G, Tessier D, Bonnin E. Endopolygalacturonases reveal molecular features for processivity pattern and tolerance towards acetylated pectin. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 2009; 1794:5-13. [DOI: 10.1016/j.bbapap.2008.09.004] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2008] [Revised: 09/01/2008] [Accepted: 09/06/2008] [Indexed: 10/21/2022]
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Ralet MC, Crépeau MJ, Bonnin E. Evidence for a blockwise distribution of acetyl groups onto homogalacturonans from a commercial sugar beet (Beta vulgaris) pectin. PHYTOCHEMISTRY 2008; 69:1903-1909. [PMID: 18448141 DOI: 10.1016/j.phytochem.2008.03.008] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2008] [Revised: 03/17/2008] [Accepted: 03/18/2008] [Indexed: 05/26/2023]
Abstract
Commercial acid-extracted sugar beet pectin was extensively hydrolysed using an endo-polygalacturonase (AnPGI from Aspergillus niger or AnPGII from A. niger or FmPG from Fusarium moniliforme) in combination with Aspergillus aculeatus pectin methyl-esterase (AaPME). The homogalacturonan-derived oligogalacturonates released were quantified by high-performance anion-exchange chromatography and their structure determined by mass spectrometry. The different endo-polygalacturonases exhibited variable tolerance towards acetyl groups. AnPGI was the most active and FmPG the less. A hypothetical homogalacturonan was constructed using the AnPGI-recovered oligogalacturonates as building blocks and the validity of the model was checked taking into account FmPG observed requirements and hydrolysis products. A blockwise repartition of the acetyl groups onto sugar beet pectin homogalacturonan is proposed.
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Affiliation(s)
- Marie-Christine Ralet
- INRA, UR1268 Biopolymères Interactions Assemblage, Rue de la Géraudière, B.P. 71627, F-44300 Nantes, France.
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Harvey DJ. Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: an update covering the period 2001-2002. MASS SPECTROMETRY REVIEWS 2008; 27:125-201. [PMID: 18247413 DOI: 10.1002/mas.20157] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
This review is the second update of the original review on the application of MALDI mass spectrometry to the analysis of carbohydrates and glycoconjugates that was published in 1999. It covers fundamental aspects of the technique as applied to carbohydrates, fragmentation of carbohydrates, studies of specific carbohydrate types such as those from plant cell walls and those attached to proteins and lipids, studies of glycosyl-transferases and glycosidases, and studies where MALDI has been used to monitor products of chemical synthesis. Use of the technique shows a steady annual increase at the expense of older techniques such as FAB. There is an increasing emphasis on its use for examination of biological systems rather than on studies of fundamental aspects and method development and this is reflected by much of the work on applications appearing in tabular form.
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Affiliation(s)
- David J Harvey
- Department of Biochemistry, Oxford Glycobiology Institute, South Parks Road, Oxford OX1 3QU, UK.
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Comparative biochemical and structural characterizations of fungal polygalacturonases. Biologia (Bratisl) 2008. [DOI: 10.2478/s11756-008-0018-y] [Citation(s) in RCA: 58] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Yapo BM, Lerouge P, Thibault JF, Ralet MC. Pectins from citrus peel cell walls contain homogalacturonans homogenous with respect to molar mass, rhamnogalacturonan I and rhamnogalacturonan II. Carbohydr Polym 2007. [DOI: 10.1016/j.carbpol.2006.12.024] [Citation(s) in RCA: 148] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Matamoros Fernández LE. Introduction to ion trap mass spectrometry: Application to the structural characterization of plant oligosaccharides. Carbohydr Polym 2007. [DOI: 10.1016/j.carbpol.2006.07.033] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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33
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Effect of temperature and pressure on the combined action of purified tomato pectinmethylesterase and polygalacturonase in presence of pectin. Enzyme Microb Technol 2007. [DOI: 10.1016/j.enzmictec.2006.08.021] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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34
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Monge ME, Negri RM, Kolender AA, Erra-Balsells R. Structural characterization of native high-methoxylated pectin using nuclear magnetic resonance spectroscopy and ultraviolet matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Comparative use of 2,5-dihydroxybenzoic acid and nor-harmane as UV-MALDI matrices. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2007; 21:2638-46. [PMID: 17654474 DOI: 10.1002/rcm.3121] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
The successful analysis by ultraviolet matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (UV-MALDI-TOF MS) of native and hydrolyzed high-methoxylated pectin samples is described. In order to find the optimal conditions for UV-MALDI-TOF MS analysis several experimental variables were studied such as: different UV-MALDI matrices (nor-harmane, 2,5-dihydroxybenzoic acid), sample preparation methods (mixture, sandwich), inorganic salt addition (doping salts, NaCl, KCl, NH(4)Cl), ion mode (positive, negative), linear and reflectron mode, etc. nor-Harmane has never been used as a UV-MALDI matrix for the analysis of pectins but its use avoids pre-treatment of the sample, such as an enzymatic digestion or an acid hydrolysis, and there is no need to add salts, making the analysis easier and faster. This study suggested an alternative way of analyzing native high-methoxylated pectins, with UV-MALDI-TOF MS, by using nor-harmane as the matrix in negative ion mode. The analysis by (1)H and (13)C nuclear magnetic resonance (NMR) spectroscopy of the native and hydrolyzed pectin is also briefly described.
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Affiliation(s)
- María Eugenia Monge
- Instituto de Química Física de Materiales, Ambiente y Energía (INQUIMAE), Departamento de Química Inorgánica, Analítica y Química Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina
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Niture SK, Kumar AR, Parab PB, Pant A. Inactivation of polygalacturonase and pectate lyase produced by pH tolerant fungus Fusarium moniliforme NCIM 1276 in a liquid medium and in the host tissue. Microbiol Res 2006; 163:51-62. [PMID: 16697174 DOI: 10.1016/j.micres.2006.03.004] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2006] [Revised: 02/28/2006] [Accepted: 03/21/2006] [Indexed: 11/16/2022]
Abstract
Fusarium moniliforme NCIM 1276 produced pH dependent an extracellular polygalacturonase (PG) and pectate lyase (PL) at pH 5 and pH 8, respectively. In the extracellular medium about 20.3% PG and 54% of PL protein concentrations were present in the active state at pH 5 and pH 8, respectively, whereas in intracellularly, more than 86% of both protein contents remained in the active state at all pH tested. We found two possible reasons, end-product inhibition and effect of environmental pH on conformation of the proteins after their release into the medium. Additionally, in infected tomato and cauliflower plants, the fungus secreted similar proteins which were located near to the epidermal and vascular regions of the hypocotyls. In infected tissues, between 26.9% and to 41.5% of PG and only 0.84%-13.4% of PL protein concentrations were present in active state. Thus, the medium/cell sap pH and concentrations of substrate/end products seem to play an important role in fungal invasion during plant pathogenesis are discussed with current literature.
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Affiliation(s)
- Suryakant K Niture
- Division of Biochemical Sciences, National Chemical Laboratory, Pune, India.
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Verlent I, Smout C, Duvetter T, Hendrickx M, Van Loey A. Effect of temperature and pressure on the activity of purified tomato polygalacturonase in the presence of pectins with different patterns of methyl esterification. INNOV FOOD SCI EMERG 2005. [DOI: 10.1016/j.ifset.2005.02.003] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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André-Leroux G, Tessier D, Bonnin E. Action pattern of Fusarium moniliforme endopolygalacturonase towards pectin fragments: Comprehension and prediction. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 2005; 1749:53-64. [PMID: 15848136 DOI: 10.1016/j.bbapap.2005.02.008] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2004] [Revised: 01/21/2005] [Accepted: 02/11/2005] [Indexed: 11/26/2022]
Abstract
The structures of complexes of Fusarium moniliforme endopolygalacturonase (endoPG) with non-methylated or partly methylated homogalacturonan fragments were modeled to identify the residues involved in substrate binding and to correlate the cleavage pattern with the experimental productive modes. The conformational space of the complex was extensively explored and malto- to hexo-oligogalacturonates were modeled in the active cleft. To select the most highly probable productive complex for each oligomer between DP2 and 6, four energetic criteria were defined. Noteworthingly, the results were in accordance with the experimental results showing the mode of action of this enzyme towards un-methyl-esterified oligogalacturonates. Furthermore, the amino-acid residues involved in the binding were confirmed by similar studies performed on other endoPGs. Then, the oligomers were gradually methyl-esterified at one or more positions and similar docking experiments were carried out. Markedly, the docking energies were not significantly modified by the methyl-esterification of the substrate and it is likely that the methyl-esterification of the substrate does not alter the mode of action of the enzyme. Finally, 1D sequence and 3D structure of the endopolygalacturonase of Aspergillus niger II, known to be strictly non-tolerant to methylesters, were compared with the sequence and structure of the tolerant F. moniliforme endopolygalacturonase to get to a structural comprehension of the tolerant-or not-behaviour of endoPGs with methyl-esterified pectins.
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Affiliation(s)
- G André-Leroux
- Institut Pasteur, Unité de Biochimie Structurale, 25 rue du Dr Roux 75724 Paris Cedex 15, France
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Matamoros Fernández LE, Obel N, Scheller HV, Roepstorff P. Differentiation of isomeric oligosaccharide structures by ESI tandem MS and GC–MS. Carbohydr Res 2004; 339:655-64. [PMID: 15013403 DOI: 10.1016/j.carres.2003.09.016] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2003] [Revised: 08/11/2003] [Accepted: 09/14/2003] [Indexed: 11/29/2022]
Abstract
A mixture of arabinoxylan oligosaccharides from wheat seedling was permethylated and analyzed by electrospray ion trap MS and GC-MS. The presence of isomeric structures differing in degree of branching and position of the branched residue along the xylose backbone was demonstrated for oligosaccharides with four and five monosaccharide residues. No isomeric structures were found for oligosaccharides with three monosaccharide residues. Linkage analysis by GC-MS reveals that xylose residues were substituted with single arabinoxyl residues at C-3.
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Affiliation(s)
- Lobvi E Matamoros Fernández
- Department of Biochemistry and Molecular Biology, Institute of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, DK-5230 Odense M, Denmark.
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Bonnin E, Le Goff A, van Alebeek GJ, Voragen A, Thibault JF. Mode of action of Fusarium moniliforme endopolygalacturonase towards acetylated pectin. Carbohydr Polym 2003. [DOI: 10.1016/s0144-8617(02)00332-6] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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