Molecular-scale speciation of Zn and Ni in soil ferromanganese nodules from loess soils of the Mississippi Basin

Application of X-ray based modern instrumental techniques to determine the heavy metals in soils, minerals and organic media

To evaluate the environmental concerns associated with heavy metals (HMs) during their translocations in food chains, it is crucial to gather data on the types of HMs present in soils in order to ascertain their toxicity and potential to migrate. An overview of the findings from several physical techniques used to determine and identify the HMs, sediments, individual minerals, and organic components in contaminated agricultural and industrial soils, is provided in this review article. These studies cover a variety of X-ray-based analytical techniques, including most widely used ones like X-ray absorption near edge structure, extended X-ray absorption fine structure, X-ray diffraction, and less popular ones X-ray fluorescence, etc. When compared to techniques that rely on laboratory radiation sources, synchrotron radiation offers more precision and efficiency. These methods could pinpoint the primary mechanisms influencing the soil's ability to transport contaminants and track their subsequent migration up the food chain.

Zn isotope signatures in soil FeMn nodules with karst high geochemical background

Zn isotope has the potential to be used as an environmental tracer, due to its role in fingerprinting specific sources and processes. However, few studies have focused on Zn isotope system in terrestrial ferromanganese (FeMn) nodules, which is important on understanding the behaviors of Zn in soils. In this study, we analyse the isotopic composition in soil FeMn nodules and surrounding materials from a typical karst region in Guangxi Province, southwestern China and use advanced synchrotron-based methods to characterize Zn speciation. The Zn isotope compositions of the FeMn nodules range from 0.09 to 0.66 ‰, with an average value of 0.24 ‰. Pb isotope fingerprinting reveals that the major material sources contributing to the FeMn nodules are the surrounding soil (δ⁶⁶Zn: ~0.36 ‰) and partly weathered carbonate bedrock (δ⁶⁶Zn: ~0.58 ‰), which contain heavier Zn isotopes than the nodules. Synchrotron-based X-ray fluorescence (μ-SXRF) shows that Zn is well correlated with both Fe and Mn. X-ray absorption near edge spectroscopy (XANES) measurements reveal that Zn is associated with both goethite and birnessite phases, with goethite-sorbed Zn accounting for ~76 % of the total Zn and birnessite-sorbed Zn accounting for ~24 %. By combining these new results, the isotopically light Zn in the FeMn nodules compared to their sources can be explained by equilibrium sorption of Zn on goethite and birnessite, during which light Zn is preferentially sorbed. Our study provides important new data on Zn isotope compositions in terrestrial soil FeMn nodules and constrains associated mechanisms, and have implications for using Zn isotopes as environmental tracers.

Sequestration and oxidation of heavy metals mediated by Mn(II) oxidizing microorganisms in the aquatic environment

Microorganisms can oxidize Mn(II) to biogenic Mn oxides (BioMnOx), through enzyme-mediated processes and non-enzyme-mediated processes, which are generally considered as the source and sink of heavy metals due to highly reactive to sequestrate and oxidize heavy metals. Hence, the summary of interactions between Mn(II) oxidizing microorganisms (MnOM) and heavy metals is benefit for further work on microbial-mediated self-purification of water bodies. This review comprehensively summarizes the interactions between MnOM and heavy metals. The processes of BioMnOx production by MnOM has been firstly discussed. Moreover, the interactions between BioMnOx and various heavy metals are critically discussed. On the one hand, modes for heavy metals adsorbed on BioMnOx are summarized, such as electrostatic attraction, oxidative precipitation, ion exchange, surface complexation, and autocatalytic oxidation. On the other hand, adsorption and oxidation of representative heavy metals based on BioMnOx/Mn(II) are also discussed. Thirdly, the interactions between MnOM and heavy metals are also focused on. Finally, several perspectives which will contribute to future research are proposed. This review provides insight into the sequestration and oxidation of heavy metals mediated by Mn(II) oxidizing microorganisms. It might be helpful to understand the geochemical fate of heavy metals in the aquatic environment and the process of microbial-mediated water self-purification.

Sporadic Pb accumulation by plants: Influence of soil biogeochemistry, microbial community and physiological mechanisms

Recent results revealed that considerable Pb accumulation in plants is possible under specific soil conditions that make Pb phytoavailable. In this review, the sources and transformations of Pb in soils, the interaction of Pb with bacteria and specifically the microbiota in the soil, factors and mechanisms of Pb uptake, translocation and accumulation in plants and Pb toxicity in living organisms are comprehensively elaborated. Specific adsorption and post-adsorption transformations of Pb in soil are the main mechanisms affecting the mobility, bioavailability, and toxicity of Pb. The adsorption ability of Pb largely depends on the composition and properties of soils and environmental conditions. Microbial impact on Pb mobility in soil and bioavailability as well as bacterial resistance to Pb are considered. Specific mechanisms conferring Pb-resistance, including Pb-efflux, siderophores, and EPS, have been identified. Pathways of Pb entry into plants as well as mechanisms of in planta Pb transport are poorly understood. Available evidence suggests the involvement of Ca transporters, organic acids and the phytochelatin pathway in Pb transport, mobility and detoxification, respectively.

Distribution of Mn Oxidation States in Grassland Soils and Their Relationships with Soil Pores

Manganese (Mn) is known to be an active contributor to processing and cycling of soil organic carbon (C), yet the exact mechanisms behind its interactions with C are poorly understood. Plant diversity in terrestrial ecosystems drives feedback links between plant C inputs and soil pores, where the latter, in turn, impact the redox environment and Mn. This study examined associations between soil pores (>36 μm Ø) and Mn within intact soils from two grassland ecosystems, after their >6-year implementation in a replicated field experiment. We used μ-XRF imaging and XANES spectroscopy to explore spatial distribution patterns of Mn oxidation states, combined with X-ray computed microtomography and 2D zymography. A high plant diversity system (restored prairie) increased soil C and modified spatial distribution patterns of soil pores as compared to a single species system (monoculture switchgrass). In switchgrass, the abundance of oxidized and reduced Mn oxidation states varied with distance from pores consistently with anticipated O₂ diffusion, while in the soil from restored prairie, the spatial patterns suggested that biological activity played a greater role in influencing Mn distributions. Based on the findings, we propose a hypothesis that Mn transformations promote C gains in soils of high plant diversity grasslands.

Impact of Antimony(V) on Iron(II)-Catalyzed Ferrihydrite Transformation Pathways: A Novel Mineral Switch for Feroxyhyte Formation

The environmental mobility of antimony (Sb) is controlled by interactions with iron (Fe) oxides, such as ferrihydrite. Under near-neutral pH conditions, Fe(II) catalyzes the transformation of ferrihydrite to more stable phases, thereby potentially altering the partitioning and speciation of associated Sb. Although largely unexplored, Sb itself may also influence ferrihydrite transformation pathways. Here, we investigated the impact of Sb on the Fe(II)-induced transformation of ferrihydrite at pH 7 across a range of Sb(V) loadings (Sb:Fe(III) molar ratios of 0, 0.003, 0.016, and 0.08). At low and medium Sb loadings, Fe(II) induced rapid transformation of ferrihydrite to goethite, with some lepidocrocite forming as an intermediate phase. In contrast, the highest Sb:Fe(III) ratio inhibited lepidocrocite formation, decreased the extent of goethite formation, and instead resulted in substantial formation of feroxyhyte, a rarely reported FeOOH polymorph. At all Sb loadings, the transformation of ferrihydrite was paralleled by a decrease in aqueous and phosphate-extractable Sb concentrations. Extended X-ray absorption fine structure spectroscopy showed that this Sb immobilization was attributable to incorporation of Sb into Fe(III) octahedral sites of the neo-formed minerals. Our results suggest that Fe oxide transformation pathways in Sb-contaminated systems may strongly differ from the well-known pathways under Sb-free conditions.

Simulated Aquifer Heterogeneity Leads to Enhanced Attenuation and Multiple Retention Processes of Zinc

Alluvial aquifers serve as one of the main water sources for domestic, agricultural, and industrial purposes globally. Groundwater quality, however, can be threatened by naturally occurring and anthropogenic metal contaminants. Differing hydrologic and biogeochemical conditions between predominantly coarse-grained aquifer sediments and embedded layers or lenses of fine-grained materials lead to variation in metal behavior. Here, we examine processes controlling Zn partitioning within a dual-pore domain-reconstructed alluvial aquifer. Natural coarse aquifer sediments from the Wind River-Little Wind River floodplain near Riverton, WY, were used in columns with or without fine-grained lenses to examine biogeochemical controls on Zn concentrations, retention mechanisms, and transport. Following the introduction of Zn to the groundwater source, Zn preferentially accumulated in the fine-grained lenses, despite their small volumetric contributions. While the clay fraction dominated Zn retention in the sandy aquifer, the lenses supported additional reaction pathways of retention-the reducing conditions within the lenses resulted in ZnS precipitation, overriding the contribution of organic matter. Zinc concentration in the groundwater controlled the formation of Zn-clays and Zn-layered double hydroxides, whereas the extent of sulfide production controlled precipitation of ZnS. Our findings illustrate how both spatial and compositional heterogeneities govern the extent and mechanisms of Zn retention in intricate groundwater systems, with implications for plume behavior and groundwater quality.

The Effect of Aeration on Mn(II) Sorbed to Clay Minerals and Its Impact on Cd Retention

Manganese is a redox-sensitive element in soils and sediments that plays an important role in the retention of trace elements. Under anoxic conditions, clay minerals were shown to increase Cd retention by favoring the precipitation of Mn(II) phases. In this study, we investigated the influence of aeration on anoxically formed Mn solid phases and its impact on Cd retention in the presence of two clay minerals with low Fe contents, a natural kaolinite (KGa-1b) and a synthetic montmorillonite (Syn-1). Ca-saturated KGa-1b and Syn-1 were pre-equilibrated with Mn²⁺ and Cd²⁺ under anoxic conditions for 1 or 30 days and subsequently exposed to air for 1 or 30 days. The analysis with synchrotron X-ray absorption spectroscopy (XAS) revealed that extended anoxic pre-equilibration (30 days) partially prevented the oxidation of sorbed Mn(II) (MnSiO₃ and Mn(II)Al-LDH). Extended exposure to ambient air and short anoxic pre-equilibration favored the formation of feitknechtite (β-MnOOH) and birnessite (δ-MnO₂). Aeration resulted in a decrease of pH and a net release of Cd²⁺ into the solution, indicating that Cd re-sorption by Mn(III/IV)-phases was insufficient to compensate for the release of Cd²⁺ due to dissolution of Mn(II)-containing phases and the decrease in pH. Our results demonstrate the significance of clay minerals in the (trans)formation of Mn-containing phases and their impact on trace metal retention in environments undergoing fluctuating redox conditions.

Quantitative investigation of ZnO nanoparticle dissolution in the presence of δ-MnO2

The widespread use of zinc oxide nanoparticles (ZnO NPs), the second most produced nanomaterial, inevitably leads to their release into the environment. In this study, dissolution and transformation of ZnO NPs in the presence of δ-MnO₂, an abundant and ubiquitous manganese (Mn) oxide mineral, was investigated via a suite of techniques covering bulk to molecular scales. Dissolution kinetics indicated that the presence of δ-MnO₂ significantly affected ZnO NP dissolution rate/trend and equilibrium Zn²⁺ concentration, which were found to be mainly dependent on the concentration and mass ratio of ZnO NPs and δ-MnO₂. Approximately 300 mg ZnO NPs per g δ-MnO₂ was expected for ZnO NP uptake at pH 7.0 via ZnO NP dissolution and surface Zn²⁺ adsorption. X-ray diffraction (XRD), ζ potential, high-resolution transmission electron microscopy (HR-TEM), and Zn K-edge X-ray absorption spectroscopy (XAS) results revealed that when the mole content of ZnO NPs was less than the total adsorption sites of δ-MnO₂ surface, ZnO NPs were completely dissolved and adsorbed on δ-MnO₂ surface in the form of inner-sphere complexes. A fraction of ZnO NPs persisted when the mole ratio of ZnO to δ-MnO₂ further increased. These results suggest that the transformation and fate of ZnO NPs is affected by environment-relevant minerals such as Mn oxides due to their huge capacity of fixing dissolved metal cations at the surface or interlayer structure.

Common and rare iron, sulfur, and zinc minerals in technogenically contaminated hydromorphic soil from Southern Russia

Soils formed after the desiccation of Lake Atamanskoe, which has served as a reservoir for liquid industrial waste from the city of Kamensk-Shakhtinsky during a long time, were studied. These soils differ from zonal soils by a strong contamination with zinc and sulfur. Preliminary studies showed that Fe compounds fix a significant part of zinc. This requires to study S, Zn, and Fe minerals. In this work, Mössbauer spectroscopy was used for the identification of iron compounds and scanning electron microscopy was used for the microanalysis of these and other minerals. To facilitate the identification of Fe minerals, brown iron ocher was removed from a contaminated soil sample and analyzed. From electron microscopy and Mössbauer spectroscopy data, ocher contained hydrogoethite with a high content of sorption water and schwertmannite (a rare mineral, probably found in Russia for the first time). The chemical composition of this schwertmannite better corresponds to the Cashion-Murad model than to the Bigham model. Particles of partially oxidized magnetite and wustite enriched with zinc were revealed under electron microscope. Siderite with partial substitution of Fe²⁺ by Zn²⁺ was detected. Thus, contaminated hydromorphic soil contains both common minerals (illite, goethite, hematite, gypsum) and rare minerals (schwertmannite, Zn siderite, partially oxidized magnetite and wustite enriched with zinc).

Rapid Hydrolysis of Penicillin Antibiotics Mediated by Adsorbed Zinc on Goethite Surfaces

The soil environment is an important sink for penicillin antibiotics released from animal manure and wastewater, but the mineral-catalyzed transformation of penicillins in soil has not been well studied. To simulate this environmental process, we systematically investigated the behavior of penicillin G and amoxicillin, the two most widely-used penicillin antibiotics, in the presence of goethite and metal ions. The results demonstrated that Zn ions significantly promoted the hydrolysis of penicillins in goethite suspensions, as evidenced by the degradation rate nearly 3 orders of magnitude higher than that of the non-Zn-containing control. The spectroscopic analysis indicated that the specific complexation between penicillins, adsorbed Zn, and goethite was responsible for the enhanced degradation. Metastable interactions, involving hydrogen bonds between carbonyl groups in the β-lactam ring and the double/triple hydroxyl groups on goethite surface, and coordination bonding between carboxyl groups and surface irons were proposed to stabilize the ternary reaction intermediates. Moreover, the surface zinc-hydroxide might act as powerful nucleophile to rapidly rupture the β-lactam ring in penicillins. This study is among the first to identify the synergic roles of Zn ion and goethite in facilitating penicillin degradation and provides insights into β-lactam antibiotics to assess their environmental risk in soil.

Determining the speciation of Zn in soils around the sediment ponds of chemical plants by XRD and XAFS spectroscopy and sequential extraction

For a correct assessment of risk of polluted soil, it is crucial to establish the speciation and mobility of the contaminants. The aim of this study was to investigate the speciation and transformation of Zn in strongly technogenically transformed contaminated Spolic Technosols for a long time in territory of sludge collectors by combining analytical techniques and synchrotron techniques. Sequential fractionation of Zn compounds in studied soils revealed increasing metal mobility. Phyllosilicates and Fe and Mn hydroxides were the main stabilizers of Zn mobility. A high degree of transformation was identified for the composition of the mineral phase in Spolic Technosols by X-ray powder diffraction. Technogenic phases (Zn-containing authigenic minerals) were revealed in Spolic Technosols samples through the analysis of their Zn K-edge EXAFS and XANES spectra. In one of the samples Zn local environment was formed by predominantly oxygen atoms, and in the other one mixed ZnS and ZnO bonding was found. Zn speciation in the studied technogenically transformed soils was due to the composition of pollutants contaminating the floodplain landscapes for a long time, and, second, this is the combination of physicochemical properties controlling the buffer properties of investigated soils. X-ray spectroscopic and X-ray powder diffraction analyses combined with sequential extraction assays is an effective tool to check the affinity of the soil components for heavy metal cations.

Competitive and Cooperative Effects during Nickel Adsorption to Iron Oxides in the Presence of Oxalate

Iron oxides are ubiquitous in soils and sediments and play a critical role in the geochemical distribution of trace elements and heavy metals via adsorption and coprecipitation. The presence of organic acids may potentially alter how metals associate with iron oxide minerals through a series of cooperative or competitive processes: solution complexation, ternary surface complexation, and surface site competition. The macroscopic and molecular-scale effects of these processes were investigated for Ni adsorption to hematite and goethite at pH 7 in the presence of oxalate. The addition of this organic acid suppresses Ni uptake on both minerals. Aqueous speciation suggests that this is dominantly the result of oxalate complexing and solubilizing Ni. Comparison of the Ni surface coverage to the concentration of free (uncomplexed) Ni²⁺ in solution suggests that the oxalate also alters Ni adsorption affinity. EXAFS and ATR-FTIR spectroscopies indicate that these changes in binding affinity are due to the formation of Ni-oxalate ternary surface complexes. These observations demonstrate that competition between dissolved oxalate and the mineral surface for Ni overwhelms the enhancement in adsorption associated with ternary complexation. Oxalate thus largely enhances Ni mobility, thereby increasing micronutrient bioavailability and inhibiting contaminant sequestration.

Impact of Mn(II)-Manganese Oxide Reactions on Ni and Zn Speciation

Layered Mn oxide minerals (phyllomanganates) often control trace metal fate in natural systems. The strong uptake of metals such as Ni and Zn by phyllomanganates results from adsorption on or incorporation into vacancy sites. Mn(II) also binds to vacancies and subsequent comproportionation with structural Mn(IV) may alter sheet structures by forming larger and distorted Mn(III)O₆ octahedra. Such Mn(II)-phyllomanganate reactions may thus alter metal uptake by blocking key reactive sites. Here we investigate the effect of Mn(II) on Ni and Zn binding to phyllomanganates of varying initial vacancy content (δ-MnO₂, hexagonal birnessite, and triclinic birnessite) at pH 4 and 7 under anaerobic conditions. Dissolved Mn(II) decreases macroscopic Ni and Zn uptake at pH 4 but not pH 7. Extended X-ray absorption fine structure spectroscopy demonstrates that decreased uptake at pH 4 corresponds with altered Ni and Zn adsorption mechanisms. These metals transition from binding in the interlayer to sheet edges, with Zn increasing its tetrahedrally coordinated fraction. These effects on metal uptake and binding correlate with Mn(II)-induced structural changes, which are more substantial at pH 4 than 7. Through these structural effects and the pH-dependence of Mn(II)-metal competitive adsorption, system pH largely controls metal binding to phyllomanganates in the presence of dissolved Mn(II).

Effects of Manganese Oxide on Arsenic Reduction and Leaching from Contaminated Floodplain Soil

Reductive release of the potentially toxic metalloid As from Fe(III) (oxyhydr)oxides has been identified as an important process leading to elevated As porewater concentrations in soils and sediments. Despite the ubiquitous presence of Mn oxides in soils and their oxidizing power toward As(III), their impact on interrelated As, Fe, and Mn speciation under microbially reducing conditions remains largely unknown. For this reason, we employed a column setup and X-ray absorption spectroscopy to investigate the influence of increasing birnessite concentrations (molar soil Fe-to-Mn ratios: 4.8, 10.2, and 24.7) on As speciation and release from an As-contaminated floodplain soil (214 mg As/kg) under anoxic conditions. Our results show that birnessite additions significantly decreased As leaching. The reduction of both As and Fe was delayed, and As(III) accumulated in birnessite-rich column parts, indicating the passivation of birnessite and its transformation products toward As(III) oxidation and the precipitation of Fe(III)(oxyhydr)oxides. Microbial Mn reduction resulted in elevated soil pH values, which in turn lowered the microbial activity in the birnessite-enriched soil. We conclude that in Mn-oxide-rich soil environments undergoing redox fluctuations, the enhanced As adsorption to newly formed Fe(III) (oxyhydr)oxides under reducing conditions leads to a transient stabilization of As.

(54)Mn Radiotracers Demonstrate Continuous Dissolution and Reprecipitation of Vernadite (δ-MnO2) during Interaction with Aqueous Mn(II)

(54)Mn radiotracers were used to assess Mn atom exchange between aqueous Mn(II) and vernadite (δ-MnO2) at pH 5.0. Continuous solid-liquid redistribution of (54)Mn atoms occurred, and systems are near isotopic equilibrium after reaction for 3 months. Despite this extensive exchange, X-ray diffraction and X-ray absorption spectroscopy data showed no major changes in vernadite bulk mineralogy. These results demonstrate that the vernadite-Mn(II) interface is dynamic, with the substrate undergoing continuous dissolution and reprecipitation mediated by aqueous Mn(II) without observable impacts on its mineralogy. Interfacial redox reactions between adsorbed Mn(II) and solid-phase Mn(IV) and Mn(III) are proposed as the main drivers of this process. Interaction between aqueous Mn(II) and structural Mn(III) likely involves interfacial electron transfer coupled with Mn atom exchange. The exchange of aqueous Mn(II) and solid-phase Mn(IV) is more complex and is proposed to result from coupled interfacial comproportionation-disproportionation reactions, where electron transfer from adsorbed Mn(II) to lattice Mn(IV) produces transient Mn(III) species that disproportionate to regenerate aqueous Mn(II) and structural Mn(IV). These findings provide further evidence of the importance of Mn(II)(aq)-MnO2(s) interactions and the attendant production of transient Mn(III) intermediates to the geochemical functioning of phyllomanganates in environments undergoing Mn redox cycling.

Submicron-Scale Heterogeneities in Nickel Sorption of Various Cell-Mineral Aggregates Formed by Fe(II)-Oxidizing Bacteria

Fe(II)-oxidizing bacteria form biogenic cell-mineral aggregates (CMAs) composed of microbial cells, extracellular organic compounds, and ferric iron minerals. CMAs are capable of immobilizing large quantities of heavy metals, such as nickel, via sorption processes. CMAs play an important role for the fate of heavy metals in the environment, particularly in systems characterized by elevated concentrations of dissolved metals, such as mine drainage or contaminated sediments. We applied scanning transmission (soft) X-ray microscopy (STXM) spectrotomography for detailed 3D chemical mapping of nickel sorbed to CMAs on the submicron scale. We analyzed different CMAs produced by phototrophic or nitrate-reducing microbial Fe(II) oxidation and, in addition, a twisted stalk structure obtained from an environmental biofilm. Nickel showed a heterogeneous distribution and was found to be preferentially sorbed to biogenically precipitated iron minerals such as Fe(III)-(oxyhydr)oxides and, to a minor extent, associated with organic compounds. Some distinct nickel accumulations were identified on the surfaces of CMAs. Additional information obtained from scatter plots and angular distance maps, showing variations in the nickel-iron and nickel-organic carbon ratios, also revealed a general correlation between nickel and iron. Although a high correlation between nickel and iron was observed in 2D maps, 3D maps revealed this to be partly due to projection artifacts. In summary, by combining different approaches for data analysis, we unambiguously showed the heterogeneous sorption behavior of nickel to CMAs.

Cryptomelane formation from nanocrystalline vernadite precursor: a high energy X-ray scattering and transmission electron microscopy perspective on reaction mechanisms

BACKGROUND

Vernadite is a nanocrystalline and turbostratic phyllomanganate which is ubiquitous in the environment. Its layers are built of (MnO6)(8-) octahedra connected through their edges and frequently contain vacancies and  (or) isomorphic substitutions. Both create a layer charge deficit that can exceed 1 valence unit per layer octahedron and thus induces a strong chemical reactivity. In addition, vernadite has a high affinity for many trace elements (e.g., Co, Ni, and Zn) and possesses a redox potential that allows for the oxidation of redox-sensitive elements (e.g., As, Cr, Tl). As a result, vernadite acts as a sink for many trace metal elements. In the environment, vernadite is often found associated with tectomanganates (e.g., todorokite and cryptomelane) of which it is thought to be the precursor. The transformation mechanism is not yet fully understood however and the fate of metals initially contained in vernadite structure during this transformation is still debated. In the present work, the transformation of synthetic vernadite (δ-MnO2) to synthetic cryptomelane under conditions analogous to those prevailing in soils (dry state, room temperature and ambient pressure, in the dark) and over a time scale of ~10 years was monitored using high-energy X-ray scattering (with both Bragg-rod and pair distribution function formalisms) and transmission electron microscopy.

RESULTS

Migration of Mn(3+) from layer to interlayer to release strains and their subsequent sorption above newly formed vacancy in a triple-corner sharing configuration initiate the reaction. Reaction proceeds with preferential growth to form needle-like crystals that subsequently aggregate. Finally, the resulting lath-shaped crystals stack, with n × 120° (n = 1 or 2) rotations between crystals. Resulting cryptomelane crystal sizes are ~50-150 nm in the ab plane and ~10-50 nm along c*, that is a tenfold increase compared to fresh samples.

CONCLUSION

The presently observed transformation mechanism is analogous to that observed in other studies that used higher temperatures and (or) pressure, and resulting tectomanganate crystals have a number of morphological characteristics similar to natural ones. This pleads for the relevance of the proposed mechanism to environmental conditions.

Impacts of aqueous Mn(II) on the sorption of Zn(II) by hexagonal birnessite

We used a combination of batch studies and spectroscopic analyses to assess the impacts of aqueous Mn(II) on the solubility and speciation of Zn(II) in anoxic suspensions of hexagonal birnessite at pH 6.5 and 7.5. Introduction of aqueous Mn(II) into pre-equilibrated Zn(II)-birnessite suspensions leads to desorption of Zn(II) at pH 6.5, but enhances Zn(II) sorption at pH 7.5. XAS results show that Zn(II) adsorbs as tetrahedral and octahedral triple-corner-sharing complexes at layer vacancy sites when reacted with birnessite in the absence of Mn(II). Addition of aqueous Mn(II) causes no discernible change in Zn(II) surface speciation at pH 6.5, but triggers conversion of adsorbed Zn(II) into spinel Zn(II)1-xMn(II)xMn(III)2O4 precipitates at pH 7.5. This conversion is driven by electron transfer from adsorbed Mn(II) to structural Mn(IV) generating Mn(III) surface species that coprecipitate with Zn(II) and Mn(II). Our results demonstrate substantial production of these reactive Mn(III) surface species within 30 min of contact of the birnessite substrate with aqueous Mn(II). Their importance as a control on the sorption and redox reactivity of Mn-oxides toward Zn(II) and other trace metal(loid)s in environments undergoing biogeochemical manganese redox cycling requires further study.

A Mn-54 radiotracer study of Mn isotope solid-liquid exchange during reductive transformation of vernadite (δ-MnO2) by aqueous Mn(II)

We employed Mn-54 radiotracers to characterize the extent and dynamics of Mn atom exchange between aqueous Mn(II) and vernadite (δ-Mn(IV)O2) at pH 7.5 under anoxic conditions. Exchange of Mn atoms between the solid and liquid phase is rapid, reaching dynamic equilibrium in 2-4 days. We propose that during the initial stages of reaction, Mn atom exchange occurs through consecutive comproportionation-disproportionation reactions where interfacial electron transfer from adsorbed Mn(II) to lattice Mn(IV) generates labile Mn(III) cations that rapidly disproportionate to reform aqueous Mn(II) and solid-phase Mn(IV). Following nucleation of Mn(III)OOH phases, additional exchange likely occurs through electron transfer from aqueous Mn(II) to solid-phase Mn(III). Our results provide evidence for the fast and extensive production of transient Mn(III) species at the vernadite surface upon contact of this substrate with dissolved Mn(II). We further show that HEPES buffer is a reductant of lattice Mn(IV) in the vernadite structure in our experiments. The methods and results presented here introduce application of Mn-54 tracers as a facile tool to further investigate the formation kinetics of labile Mn(III) surface species and their impacts on Mn-oxide structure and reactivity over a range of environmentally relevant geochemical conditions.

Pyrosequencing revealed highly microbial phylogenetic diversity in ferromanganese nodules from farmland

There is renewed interest in the origin and makeup of ferromanganese nodules (FMNs), long known to soil mineralogists as unusual secondary minerals. However, new evidence suggests that microorganisms play a significant role in the generation of FMNs. The biogenic origin of nodules has remained elusive because until recently, little has been known about the overall microbial community structure in their microbiota. To learn more about the microbial community and to determine the relative abundance, diversity, and composition of the microbial communities present in FMNs and their surrounding soil, we used pyrosequencing to investigate 16S rRNA genes obtained from vertical soil profiles of both paddy fields and sugarcane fields. Using pyrotaq 16S rRNA gene sequencing, we show that the microbial phylogenetic diversity of nodules was higher than those reported in previous studies of this biosphere, and we identified many previously unidentified microorganisms. Here, we show that the microbial community of these nodules is dominated by Burkholderiales, Rhodocyclales, Acidobacteriales, Desulfuromonales, and Clostridiales, and there were no statistically significant differences found when comparing the microbial community structures of FMNs obtained from vertical soil sequences. Although the microbial composition was markedly different between the surrounding soil and the FMNs, the microbes found within the FMNs were very similar to other FMNs from both field types examined here. In addition to their geochemical properties and the microbial community composition of FMNs, we found that the levels of iron (Fe), manganese (Mn), and SiO2 greatly impact the microbial diversity among FMN communities. Our results indicate that the FMN microbial communities from different land-use types are very similar and suggest that natural selection of these microbes is based on the oligotrophic conditions and the high metal content. Researching FMNs in these two land-use patterns, which represent two different redox potentials, deepens our understanding of Fe-Mn biogeochemical cycling in these oligotrophic biospheres and suggests a biogenetical origin for these nodules.

Speciation and distribution of copper in a mining soil using multiple synchrotron-based bulk and microscopic techniques

Molecular-level understanding of soil Cu speciation and distribution assists in management of Cu contamination in mining sites. In this study, one soil sample, collected from a mining site contaminated since 1950s, was characterized complementarily by multiple synchrotron-based bulk and spatially resolved techniques for the speciation and distribution of Cu as well as other related elements (Fe, Ca, Mn, K, Al, and Si). Bulk X-ray absorption near-edge structure (XANES) and extended X-ray absorption fine structure (EXAFS) spectroscopy revealed that soil Cu was predominantly associated with Fe oxides instead of soil organic matter. This agreed with the closest association of Cu to Fe by microscopic X-ray fluorescence (U-XRF) and scanning transmission X-ray microscopy (STXM) nanoanalysis, along with the non-occurrence of photoreduction of soil Cu(II) by quick Cu L3,2-edge XANES spectroscopy (Q-XANES) which often occurs when Cu organic complexes are present. Furthermore, bulk-EXAFS and STXM-coupled Fe L3,2-edge nano-XANES analysis revealed soil Cu adsorbed primarily to Fe(III) oxides by inner-sphere complexation. Additionally, Cu K-edge μ-XANES, L3,2-edge bulk-XANES, and successive Q-XANES results identified the presence of Cu2S rather than radiation-damage artifacts dominant in certain microsites of the mining soil. This study demonstrates the great benefits in use of multiple combined synchrotron-based techniques for comprehensive understanding of Cu speciation in heterogeneous soil matrix, which facilitates our prediction of Cu reactivity and environmental fate in the mining site.

Reductive transformation of birnessite by aqueous Mn(II)

Reaction of aqueous Mn(II) with hexagonal birnessite at pH 7.5 causes reductive transformation of birnessite into feitknechtite (β-Mn(III)OOH) and manganite (γ-Mn(III)OOH) through interfacial electron transfer from adsorbed Mn(II) to structural Mn(IV) atoms and arrangement of product Mn(III) into MnOOH, summarized by Mn(II) + Mn(IV)O(2) + 2 H(2)O → 2 Mn(III)OOH + 2 H(+). Feitknechtite is the initial transformation product, and subsequently converted into the more stable manganite polymorph during ongoing reaction with Mn(II). Feitknechtite production is observed at Mn(II) concentrations 2 orders of magnitude below thermodynamic thresholds, reflecting uncertainty in thermodynamic data of Mn-oxide minerals and/or specific interactions between Mn(II) and birnessite surface sites facilitating electron exchange. Under oxic conditions, feitknechtite formation through surface-catalyzed oxidation of Mn(II) by O(2) leads to additional Mn(II) removal from solution relative to anoxic systems. These results indicate that Mn(II) may be an important moderator of the reductive arm of Mn-oxide redox cycling, and suggest a controlling role of Mn(II) in regulating the solubility and speciation of phyllomanganate-reactive metal pollutants including Co, Ni, As, and Cr in geochemical environments.

Advanced in situ spectroscopic techniques and their applications in environmental biogeochemistry: introduction to the special section

Understanding the molecular-scale complexities and interplay of chemical and biological processes of contaminants at solid, liquid, and gas interfaces is a fundamental and crucial element to enhance our understanding of anthropogenic environmental impacts. The ability to describe the complexity of environmental biogeochemical reaction mechanisms relies on our analytical ability through the application and developmemnt of advanced spectroscopic techniques. Accompanying this introductory article are nine papers that either review advanced in situ spectroscopic methods or present original research utilizing these techniques. This collection of articles summarizes the challenges facing environmental biogeochemistry, highlights the recent advances and scientific gaps, and provides an outlook into future research that may benefit from the use of in situ spectroscopic approaches. The use of synchrotron-based techniques and other methods are discussed in detail, as is the importance to integrate multiple analytical approaches to confirm results of complementary procedures or to fill data gaps. We also argue that future direction in research will be driven, in addition to recent analytical developments, by emerging factors such as the need for risk assessment of new materials (i.e., nanotechnologies) and the realization that biogeochemical processes need to be investigated in situ under environmentally relevant conditions.

Natural attenuation of zinc pollution in smelter-affected soil

Previous synchrotron X-ray microprobe measurements of Zn speciation in contaminated and uncontaminated soils have identified phyllosilicate as the main sequestration phase. The emphasis now is focused on comparing the nature and properties of neoformed and geogenic phyllosilicate species to understand natural attenuation processes. Refined structural characterization of the two types of Zn-containing phyllosilicate in slightly basic smelter-affected agricultural soils were obtained using a so far unprecedented combination of X-ray microscopic techniques, including fluorescence (μ-XRF), absorption (μ-EXAFS), and diffraction (μ-XRD), and X-ray bulk-sensitive techniques, including powder and polarized EXAFS spectroscopy. The unpolluted and polluted species are both dioctahedral smectites, but the first which contains minor Zn (ca. 150 mg/kg) is aluminous and Fe-free, and the second, which contains several hundreds to a few thousands mg/kg Zn depending on the distance to the smelter and wind direction, is ferruginous with an average Fe/Al atomic ratio of 1.1 ± 0.5. The Zn(2+) and Fe(3+) in the neoformed smectite are derived from the weathering of ZnS, ZnO, FeS(2), and ZnFe(2)O(4) particles from the smelter. These cations diffuse away from their particulate mineral sources and coprecipitate with Al and Si in the soil clay matrix. Zinc sequestration in the octahedral sheet of dioctahedral smectite is potentially irreversible, because this type of phyllosilicate is stable over a large pH range, and the neoformed species is analogous to the native species which formed over time during pedogenesis.

Heavy metal (Cu, Zn, Cd and Pb) partitioning and bioaccessibility in uncontaminated and long-term contaminated soils

We investigated the pore-water content and speciation of copper (Cu), zinc (Zn), cadmium (Cd) and lead (Pb) in a range of uncontaminated and long-term contaminated soils in order to establish their potential bioaccessibility to soil biota, plants and humans. Among the samples, soil pH (0.01 M CaCl(2)) ranged from 4.9 to 8.2. The total metal content of the uncontaminated soils ranged from 3.8 to 93.8 mg Cu kg(-1), 10.3 to 95 mg kg(-1) Zn, 0.1 to 1.8 mg Cd kg(-1) and 5.2 to 183 mg kg(-1) Pb, while metal content in the contaminated soils ranged from 104 to 6841 mg Cu kg(-1), 312 to 39,000 mg kg(-1) Zn, 6 to 302 mg Cd kg(-1) and 609 to 12,000 mg kg(-1) Pb. Our analysis of pore-water found the Cu concentrations to be much higher in contaminated soils than in uncontaminated soils, with the distribution coefficients (K(d)) correlating significantly with the log of dissolved organic carbon concentrations. Despite the high total metal content of the contaminated soil, Zn, Cd and Pb were not generally found at elevated levels in the pore-water with the exception of a single contaminated soil. A long period of ageing and soil weathering may have led to a substantial reduction in heavy metal concentrations in the pore-water of contaminated soils. On the other hand, Pb bioaccessibility was found to be comparatively high in Pb contaminated soils, where it tended to exceed the total Pb values by more than 80%. We conclude that, despite the extensive ageing of some contaminated soils, the bioaccessibility of Pb remains relatively high.

A dedicated superbend x-ray microdiffraction beamline for materials, geo-, and environmental sciences at the advanced light source

A new facility for microdiffraction strain measurements and microfluorescence mapping has been built on beamline 12.3.2 at the advanced light source of the Lawrence Berkeley National Laboratory. This beamline benefits from the hard x-radiation generated by a 6 T superconducting bending magnet (superbend). This provides a hard x-ray spectrum from 5 to 22 keV and a flux within a 1 microm spot of approximately 5x10(9) photons/s (0.1% bandwidth at 8 keV). The radiation is relayed from the superbend source to a focus in the experimental hutch by a toroidal mirror. The focus spot is tailored by two pairs of adjustable slits, which serve as secondary source point. Inside the lead hutch, a pair of Kirkpatrick-Baez (KB) mirrors placed in a vacuum tank refocuses the secondary slit source onto the sample position. A new KB-bending mechanism with active temperature stabilization allows for more reproducible and stable mirror bending and thus mirror focusing. Focus spots around 1 microm are routinely achieved and allow a variety of experiments, which have in common the need of spatial resolution. The effective spatial resolution (approximately 0.2 microm) is limited by a convolution of beam size, scan-stage resolution, and stage stability. A four-bounce monochromator consisting of two channel-cut Si(111) crystals placed between the secondary source and KB-mirrors allows for easy changes between white-beam and monochromatic experiments while maintaining a fixed beam position. High resolution stage scans are performed while recording a fluorescence emission signal or an x-ray diffraction signal coming from either a monochromatic or a white focused beam. The former allows for elemental mapping, whereas the latter is used to produce two-dimensional maps of crystal-phases, -orientation, -texture, and -strain/stress. Typically achieved strain resolution is in the order of 5x10(-5) strain units. Accurate sample positioning in the x-ray focus spot is achieved with a commercial laser-triangulation unit. A Si-drift detector serves as a high-energy-resolution (approximately 150 eV full width at half maximum) fluorescence detector. Fluorescence scans can be collected in continuous scan mode with up to 300 pixels/s scan speed. A charge coupled device area detector is utilized as diffraction detector. Diffraction can be performed in reflecting or transmitting geometry. Diffraction data are processed using XMAS, an in-house written software package for Laue and monochromatic microdiffraction analysis.

Characterization of iron- and manganese-cemented redoximorphic aggregates in wetland soils contaminated with mine wastes

In wetlands, translocation of Fe and Mn from reducing to oxidizing zones creates localized enrichments and depletions of oxide minerals. In zones of enrichment, oxides cement matrix particles together into aggregates. In this paper, we describe the various Fe- and Mn-cemented features present in the 1 to 2-mm size fraction of mine-waste contaminated wetland soils of the Coeur d'Alene (CDA) River Basin in northern Idaho. These aggregates are categorized based on color and morphology. Total Fe and Mn concentrations are also reported. Distribution of the aggregates in soil profiles along an elevation transect with varying water table heights was investigated. Six distinct categories of aggregates were characterized in the 1 to 2-mm size fraction. The two most predominant categories were aggregates cemented by only Fe oxides and aggregates cemented by a mixture of Fe and Mn oxides. Iron-depleted aggregates, Fe and Mn-cemented sand aggregates, and root channel linings were also identified. The remaining aggregates were categorized into a catch-all category that consisted of primarily charcoal particles. The highest Fe content was in the root channel linings, and the highest Mn content was in the Fe/Mn cemented particles. Iron-cemented aggregates were most common in surface horizons at all sites, and root channels were most common in the 30 to 45-cm core at the lowland point, reflecting the presence of deep rooting vegetation at this site. Spatial distributions of other aggregates at the site were not significant.

Fate of zinc in an electroplating sludge during electrokinetic treatments

Chemical structure of zinc in the electrokinetic treatments of an electroplating sludge has been studied by in situ extended X-ray absorption fine structural (EXAFS) and X-ray absorption near edge structural (XANES) spectroscopies in the present work. The least-square fitted XANES spectra indicate that the main zinc compounds in the sludge were ZnCO(3) (75%), ZnOSiO(2) (17%) and Zn(OH)(2) (7%). Zinc in the sludge possessed a Zn-O bond distance of 2.07 A with a coordination number (CN) of 5. In the second shells, the bond distance of Zn-(O)-Si was 3.05 A (CN=2). An increase of Zn-(O)-Si (0.05 A) with a decrease of its CN (from 5 to <1) was found in the early stage of the electrokinetic treatment. Prolong the electrokinetic treatment time to 180 min, about 34% of Zn(II) was dissolved into the aqueous phase and about 68% of Zn(II) in the sludge (or 23% of total zinc) was migrated to the cathode under the electric field (5 V cm(-1)). The dissolution and electromigration rates of Zn(II) in the sludge were 1.0 and 0.6 mmol h(-1)g(-1) sludge, respectively during the electrokinetic treatment. This work also exemplifies the utilization of in situ EXAFS and XANES for revealing speciation and possible reaction pathways during the course of zinc recycling from the sludge by electrokinetic treatments.

Zn incorporation in hydroxy-Al- and keggin Al13-intercalated montmorillonite: a powder and polarized EXAFS study

The sorption mechanism of Zn on gibbsite and mont-morillonite exchanged with Al3+ (Al-mont) or Keggin Al13 polymer (Al13-mont) was probed by powder and polarized EXAFS spectroscopy as a function of pH (5.85-7), reaction time (1-65 days), and sorbate to sorbent ratio (50-Zn is octahedrally coordinated to oxygens at approximately 2.08(2) A, and surrounded in-plane by six Al atoms at 3.02-3.06(2) A, and another six at 6 A. No out-of plane Si neighbors are detected. These results are interpreted as Zn incorporation in vacant octahedral sites of gibbsite-like layers at the basal and/or interlayer surface of montmorillonite particles. Zinc sorbed on the edges of gibbsite layers would give a split first oxygen shell with bond distances of 2.00(2) and 2.16(3) A, and 2.1(8) nearest Al at 3.02 A with no second-nearest Al, none of which were observed in Al-mont. The binding environment of Zn on Al13-mont after 1 day is similar to that on the edges of gibbsite, and is interpreted as Zn complexation at the surface of Al polymers. After 28 days, the Zn environment resembles that of Zn-sorbed Al-mont, indicating the progressive buildup of Zn-containing gibbsite-like layers parallel to montmorillonite layers. The results of this work clarify the incorporation mechanism of Zn in hydroxy-Al interlayered phyllosilicate and provide insight on the formation mechanism of this common Zn species in soil.

Nickel and lead sequestration in manganese oxide-coated montmorillonite

Amorphous hydrous manganese oxide (HMO) is an important mineral in soils and sediments influencing the mobility and bioavailability of metal contaminants. In this study, nickel and lead sorption to discrete HMO and HMO-coated montmorillonite was investigated mechanistically. The effect of pH and concentration revealed that when normalized to the mass of oxide present, the HMO-coated montmorillonite behaved similarly to the discrete Mn oxide, where both ions sorbed onto HMO-coated montmorillonite as inner-sphere complexes. Ni coordinated to the vacancy sites in the Mn oxide structure, while Pb formed bidentate corner-sharing complexes. These coordination environments were observed not only as a function of loading, pH, and ionic strength, but also in long-term studies where sorption increased by as much as 100% (from 6x10(-4) to 1.2x10(-3) mol Ni/g HMO-coated montmorillonite). In this slower sorption process, intraparticle diffusion, the internal surface sites along microporous walls appear to be no different than external ones. Best fit diffusivities ranged from 10(-12) to 10(-13) cm2/s for Ni and 10(-17) to 10(-20) cm2/s for Pb. The significant difference in the diffusivities for the two ions is consistent with site activation theory, where theoretical surface diffusivities were predicted and given their error were in agreement with experimental results. Mn oxides sequester heavy metals in the environment.

A simplified method to estimate kinetic and thermodynamic parameters on the solid–liquid separation of pollutants

The aim of the present study was to propose a simplified experimental-theoretical method for estimating the kinetic and thermodynamic parameters for the solid-liquid separation of pollutants by using kinetic studies with batch reactors, i.e., the removed quantity of dissolved ion as a function of time at different initial concentration. This method was applied to the removal of uranyl ion (UO(2+)(2)) from aqueous solutions onto synthetic manganese oxide (birnessite). The pseudo-second-order kinetics and one-site saturation models were proposed to fit the experimental and calculated data, the fitting parameters being estimated by nonlinear regression, using the least-squares method. For initial concentration range 0.2-11.8 microM, the results showed that the uranyl removal process in dispersed batch reactors can be efficiently modeled by the proposed models. Then, several kinetic and thermodynamic parameters were calculated, such as maximal removed quantity of uranyl, q(r,max), half-removal time, t(1/2), initial rate of uranyl-ion removal, v(0), initial uranyl-removal coefficient, K, maximal rate of uranyl removal, v(0,max), mass transfer coefficient, D(transfer), equilibrium Langmuir constant, K(L), and constant separation factor, K(s). These parameters make it possible to demonstrate that the removal of U onto birnessite is favorable, and that the maximum surface coverage of the uranyl ions represents about 3% of vacant sites in the Mn layer.

The impact of Mn oxide coatings on Zn distribution

Zinc sorption to hydrous manganese oxide (HMO)-coated clay was investigated macroscopically, kinetically, and spectroscopically. Adsorption edges and isotherms revealed that the affinity and capacity of the HMO-coated montmorillonite was greater than that of montmorillonite, and when normalized to the oxide present, the coatings behaved similarly to the discrete Mn oxide. Over two pH conditions, 5 and 6, a linear relationship was observed for the isotherms; further analysis with X-ray absorption spectroscopy (XAS) resulted in one type of sorption configuration as a function of loading and ionic strength at pH 5. However, at a surface loading of 10(-3) mol(Zn) g(HMO-coatedclay)(-1) when the pH increased from 5 to 7, the first shell distance decreased slightly, while the atoms and coordination numbers remained the same; this change may be attributed to an increase in electrostatic interactions. After a contact time of 4 months where an additional 60% of the sites become occupied, the slower sorption process was modeled as intraparticle surface diffusion. Best fit diffusivities ranged from 10(-18) to 10(-17) cm2/s, where a slower process was observed for the coated surface as compared to the discrete oxide. Interestingly, the porosity of the Mn oxide coating appears to be influenced by the substrate during its growth, as its increase and shift to a smaller pore size distribution resulted in a diffusivity between that observed for discrete HMO and montmorillonite.

Changes in zinc speciation in field soil after contamination with zinc oxide

Recent studies on the speciation of Zn in contaminated soils confirmed the formation of Zn-layered double hydroxide (LDH) and Zn-phyllosilicate phases. However, no information on the kinetics of the formation of those phases under field conditions is currently available. In the present study, the transformation of Zn in a field soil artificially contaminated with ZnO containing filter dust from a brass foundry was monitored during 4 years using extended X-ray absorption fine structure (EXAFS) spectroscopy. Soil sections were studied by micro-X-ray fluorescence (micro-XRF) and micro-EXAFS spectroscopy. EXAFS spectra were analyzed by principal component analysis (PCA) and linear combination fitting (LCF). The results show that ZnO dissolved within 9 months and that half of the total Zn reprecipitated. The precipitate was mainly of the Zn-LDH type (>75%). Only a minor fraction (<25%) may be of Zn-phyllosilicate type. The remaining Zn was adsorbed to soil organic and inorganic particles. No significant changes in Zn speciation occurred from 9 to 47 months after the contamination. Thermodynamic calculations show that both Zn-LDH and Zn-phyllosilicate may form in the presence of ZnO but that the formation of Zn-phyllosilicate would be thermodynamically favored. Thus, the dominance of Zn-LDH found by spectroscopy suggests that the formation of the Zn precipitates was not solely controlled bythermodynamics but also contained a kinetic component. The rate-limiting step could be the supply of Al and Si from soil minerals to the Zn-rich solutions around dissolving ZnO grains.

Field column study using zerovalent iron for mercury removal from contaminated groundwater

Passive in situ remediation technologies, for example, permeable reactive barriers, PRBs, are an attractive and less expensive alternative compared to conventional pump and treat systems for groundwater remediation. Field column experiments were conducted to evaluate the removal of dissolved mercury from groundwater using zerovalent iron as the reactive media. Two column tests were conducted over a 6-week period, which simulated 2 and 10 years of groundwater flow through a potential full-scale treatment system. The influent groundwater pH was 7.8-9.5. The groundwater was reduced with an Eh, corrected to the standard hydrogen electrode, ranging from 0 to 120 mV over the trial period. Prior to treatment the total mercury concentration of the groundwater was approximately 40 microg L(-1). Effluent from the 10-year simulation contained approximately 0.5 microg/L of mercury during the first 3 weeks and increased to as much as 4 microg L(-1) by the end of the testing period. Effluent from the 2-year simulation was generally < 0.1 microg L(-1). Profile sampling of the 2-year simulation suggests that most of the mercury removal occurred in the initial 50% of the 20 cm column. Mineralogical studies, conducted using SEM/EDS and X-ray absorption spectroscopy (XAS), confirm the accumulation of mercury onto a zerovalent iron surface in this 20-cm zone. These analyses indicate that mercury accumulated as a mercury sulfide with a stoichiometery similar to those of cinnabar and metacinnabar (HgS).

Evidence for biogenic pyromorphite formation by the nematode Caenorhabditis elegans

The determination of chemical speciation and spatial distribution is a prerequisite for a mechanistic understanding of contaminant bioavailability and toxicity to an organism. We have employed synchrotron X-ray techniques to study Cu and Pb speciation and spatial distribution in the soil nematode Caenorhabditis elegans. Nematodes were exposed to each metal ion singly or simultaneously in solution for 24 h and were then rinsed thoroughly and preserved in formalin for transportation to the National Synchrotron Light Source. Experiments were conducted at the microprobe beamline X26A employing a focused beam of approximately 10 microm in diameter. Nematodes were mounted in agar gel on Kapton tape. Two-dimensional elemental maps for Cu- and Pb-exposed nematodes were collected in fluorescence mode. Copper was homogeneously distributed throughout the body of the nematode, but Pb exhibited a high degree of localization in the nematode, exclusively in the anterior pharynx region. Detectable localized concentrations of Pb in C. elegans occurred at aqueous exposure concentrations of 2.4 microM. Micro X-ray diffraction of these Pb hotspots gave a diffraction pattern indicating a crystalline Pb solid that was consistent with the Pb phosphate, pyromorphite. Biogenic inorganic phosphate granule formation is relatively common in soil invertebrates; however, these phosphates are typically amorphous, and we believe that this is the first report of crystalline pyromorphite formed internally in an organism.

Spatially resolved characterization of biogenic manganese oxide production within a bacterial biofilm

Pseudomonas putida strain MnB1, a biofilm-forming bacterial culture, was used as a model for the study of bacterial Mn oxidation in freshwater and soil environments. The oxidation of aqueous Mn+2 [Mn+2(aq)] by P. putida was characterized by spatially and temporally resolving the oxidation state of Mn in the presence of a bacterial biofilm, using scanning transmission X-ray microscopy (STXM) combined with near-edge X-ray absorption fine structure (NEXAFS) spectroscopy at the Mn L2,3 absorption edges. Subsamples were collected from growth flasks containing 0.1 and 1 mM total Mn at 16, 24, 36, and 48 h after inoculation. Immediately after collection, the unprocessed hydrated subsamples were imaged at a 40-nm resolution. Manganese NEXAFS spectra were extracted from X-ray energy sequences of STXM images (stacks) and fit with linear combinations of well-characterized reference spectra to obtain quantitative relative abundances of Mn(II), Mn(III), and Mn(IV). Careful consideration was given to uncertainty in the normalization of the reference spectra, choice of reference compounds, and chemical changes due to radiation damage. The STXM results confirm that Mn+2(aq) was removed from solution by P. putida and was concentrated as Mn(III) and Mn(IV) immediately adjacent to the bacterial cells. The Mn precipitates were completely enveloped by bacterial biofilm material. The distribution of Mn oxidation states was spatially heterogeneous within and between the clusters of bacterial cells. Scanning transmission X-ray microscopy is a promising tool for advancing the study of hydrated interfaces between minerals and bacteria, particularly in cases where the structure of bacterial biofilms needs to be maintained.

Properties and structure of manganese oxide-coated clay

In the environment, heavy metals are important contaminants that sorb to and accumulate in soils and sediments. Dominant minerals in the subsurface are oxides and clay, which occur as discrete particles and heterogeneous systems; these surfaces can significantly impact the mobility and bioavailability of metals through sorption. To better understand heterogeneous systems, amorphous (hydrous manganese oxide (HMO)) and crystalline manganese oxides (birnessite and pyrolusite) were coated on montmorillonite. However, the montmorillonite substrate potentially inhibited crystallization of the pyrolusite coating, and also resulted in a poorly crystalline birnessite. Mineralogy and morphology of the coated systems suggest an amorphous structure for HMO and uniform coverage for HMO and birnessite coatings; the presence of Si and Al indicates uncoated areas along intraplanar surfaces. The coating surface charge behaved similarly to that of discrete oxides and clay where the pH(znpc) of HMO- and birnessite-coated clay were 2.8 and 3.1, respectively. Surface area of the coated systems increased while the pore size distribution decreased as compared to the external surface area and pores of montmorillonite. X-ray absorption spectroscopy (XAS) revealed the local structural environment of Mn in the HMO- and birnessite-coated clay was consistent with the pure phase oxides: for HMO-coated clay 3.1 atoms of oxygen at 1.89 +/- 0.02 A in the first shell and 2.7 atoms of manganese at 2.85 +/- 0.02 in the second shell; and, for birnessite-coated clay 6 atoms of oxygen at 1.91 +/- 0.02 A in the first shell and 6 atoms of manganese at distance 2.99 +/- 0.02 A in the second shell. Overall, the surface properties suggest that the coating behaves like that of discrete oxides, an important sink for metal contaminants.

Speciation of PM10 sources of airborne nonferrous metals within the 3-km zone of lead/zinc smelters

The purpose of this study was to estimate the speciation of PM10 sources of airborne Pb, Zn, and Cd metals (PM10 is an aerosol standard of aerodynamic diameter less than 10 microm.) in the atmosphere of a 3 km zone surrounding lead/zinc facilities in operation for a century. Many powdered samples were collected in stacks of working units (grilling, furnace, and refinery), outdoor storages (ores, recycled materials), surrounding waste slag (4 Mt), and polluted topsoils (3 km). PM10 samples were generated from the raw powders by using artificial resuspension and collection devices. The bulk PM10 multielemental analyses were determined by inductively coupled plasma-atomic emission spectrometry (ICP-AES). The proportions in mass of Pb (50%), Zn (40%), and Cd (1%) contents and associated metals (traces) reach the proportions of corresponding raw powdered samples of ores, recycled materials, and fumesize emissions of plants without specific enrichment. In contrast, Pb (8%) and Zn (15%) contents of PM10 of slag deposit were found to be markedly higher than those of raw dust, Pb (4%), and Zn (9%), respectively. In the same way, Pb (0.18%), Zn (0.20%), and Cd (0.004%) were enriched by 1.7, 2.1, and 2.3 times, respectively, in PM10 as compared with raw top-soil corresponding values. X-ray wavelength dispersive electron-microprobe (EM-WDS) microanalysis did not indicate well-defined phases or simple stoichiometries of all the PM10 samples atthe level of the spatial resolution (1 microm3). X-ray photoelectron spectroscopy (XPS) indicated that minor elements such as Cd, Hg, and C are more concentrated on the particle surface than in the bulk of PM10 generated by the smelting processes. (XPS) provided also the average speciation of the surface of PM10; Pb is mainly represented as PbSO4, Zn as ZnS, and Cd as CdS or CdSO4, and small amounts of coke were also detected. The speciation of bulk PM10 crystallized compounds was deduced from XRD diffractograms with a raw estimation of the relative quantities. PbS and ZnS were found to be the major phases in PM10 generated by the smelting facilities with PbSO4, PbSO4 x PbO, PbSO4 x 4PbO, Pb metal, and ZnO as minor phases. The slag waste PM10 was found to contain some amounts of PbCO3, PbSO4 x PbO, and ZnFe2O4 phases. The large heterogeneity at the level of the individual particle generates severe overlap of chemical information even at the microm scale using electron microprobe (WDS) and Raman microprobe techniques. Fortunately, scanning Raman microspectrometry combined with SIMPle-to-use Interactive Self-modeling Mixture Analysis (SIMPLISMA) performed the PM10 speciation at the level of individual particles. The speciation of major Pb, Zn, and Cd compounds of PM10 stack emissions and wind blown dust of ores and recycled materials were found to be PbSO4, PbSO4 x PbO, PbSO4 x 4PbO, PbO, metallic Pb, ZnS, ZnO, and CdS. The PM10 dust of slag waste was found to contain PbCO3, Pb(OH)2 x 2PbCO3, PbSO4 x PbO, and ZnS, while PM10-bound Pb, Zn of the top-soils contain Pb5(PO4)3Cl, ZnFe2O4 as well as Pb(II) and Zn(II) compounds adsorbed on Fe(III) oxides and in association with clays.

Surface complexation of copper(II) on soil particles: EPR and XAFS studies

The interactions of transition metals with natural systems play an important role in the mobility and the bioavailability of these metals in soils. In this study, the adsorption of copper(II) onto natural soil particles was studied as a function of pH and metal concentration. The retention capacity of soil particles was determined at pH 6.2 to be equal to 6.7 mg of copper/g of solid. The Langmuir and Freundlich isotherm equations were then used to describe the partitioning behavior of the system at different pH values. A combination of EPR, extended X-ray absorption fine structure (EXAFS), and X-ray absorption near-edge structure (XANES) spectroscopies was used to probe the Cu atomic environment at the soil particles/aqueous interface. The spectroscopic study revealed that copper(II) ions are held in inner-sphere surface complexes. It also revealed that Cu was in an octahedral coordination with first-shell oxygen atoms. A weak tetragonal distortion was pointed out due to the Jahn-Teller effect, with a mean Cu-Oequatorial bond distance of 1.96 A and a Cu-Oaxial bond distance of 2.06 A. A detailed analysis of the spectroscopic data suggested that Cu(II) was bonded to organic matter coated onto the mineral fraction of soil particles.

Zn speciation in the organic horizon of a contaminated soil by micro-X-ray fluorescence, micro- and powder-EXAFS spectroscopy, and isotopic dilution

Soils that have been acutely contaminated by heavy metals show distinct characteristics, such as colonization by metal-tolerant plant species and topsoil enrichment in weakly degraded plant debris, because biodegradation processes are strongly inhibited by contamination. Such an organic topsoil, located downwind of an active zinc smelter and extremely rich in Zn (approximately 2%, dry weight), was investigated by X-ray diffraction, synchrotron-based X-ray microfluorescence, and powder- and micro-extended X-ray absorption fine structure (EXAFS) spectroscopy for Zn speciation and by isotopic dilution for Zn lability. EXAFS spectra recorded on size fractions and on selected spots of thin sections were analyzed by principal component analysis and linear combination fits. Although Zn primary minerals (franklinite, sphalerite, and willemite) are still present (approximately 15% of total Zn) in the bulk soil, Zn was found to be predominantly speciated as Zn-organic matter complexes (approximately 45%), outer-sphere complexes (approximately 20%), Zn-sorbed phosphate (approximately 10%), and Zn-sorbed iron oxyhydroxides (approximately 10%). The bioaccumulated Zn fraction is likely complexed to soil organic matter after the plants' death. The proportion of labile Zn ranges from 54 to 92%, depending on the soil fraction, in agreement with the high proportion of organically bound Zn. Despite its marked lability, Zn seems to be retained in the topsoil thanks to the huge content of organic matter, which confers to this horizon a high sorption capacity. The speciation of Zn in this organic soil horizon is compared with that found in other types of soils.

Microextended X-ray Absorption Fine Structure Studies of Cadmium Speciation within Single Municipal Solid Waste Fly Ash Particles

The local chemical structure of trace amounts of cadmium within microvolumes of highly inhomogeneous municipal solid waste fly ash particles was successfully monitored by means of micro-EXAFS. A new quantification procedure was developed for the evaluation of the micro-EXAFS data sets obtained from each individual particle based on a reverse Monte Carlo simulation. Evidence has been presented for the existence of cadmium silicate and cadmium chloride, with the cadmium silicate being the dominant form, and it has been demonstrated that the cadmium exists in both crystalline and amorphous states within the microspots analyzed.