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Xu F, Wang Q, Moro E, Chen L, Salazar Miranda A, González MC, Tizzoni M, Song C, Ratti C, Bettencourt L, Li Y, Evans J. Using human mobility data to quantify experienced urban inequalities. Nat Hum Behav 2025; 9:654-664. [PMID: 39962223 DOI: 10.1038/s41562-024-02079-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Accepted: 10/29/2024] [Indexed: 04/25/2025]
Abstract
The lived experience of urban life is shaped by personal mobility through dynamic relationships and resources, marked not only by access and opportunity, but also inequality and segregation. The recent availability of fine-grained mobility data and context attributes ranging from venue type to demographic mixture offer researchers a deeper understanding of experienced inequalities at scale, and pose many new questions. Here we review emerging uses of urban mobility behaviour data, and propose an analytic framework to represent mobility patterns as a temporal bipartite network between people and places. As this network reconfigures over time, analysts can track experienced inequality along three critical dimensions: social mixing with others from specific demographic backgrounds, access to different types of facilities, and spontaneous adaptation to unexpected events, such as epidemics, conflicts or disasters. This framework traces the dynamic, lived experiences of urban inequality and complements prior work on static inequalities experience at home and work.
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Affiliation(s)
- Fengli Xu
- Department of Electronic Engineering, Beijing National Research Center for Information Science and Technology (BNRist), Tsinghua University, Beijing, P. R. China.
| | - Qi Wang
- Department of Civil and Environmental Engineering, Northeastern University, Boston, MA, USA
| | - Esteban Moro
- Media Lab, Massachusetts Institute of Technology, Cambridge, MA, USA
- Network Science Institute, Department of Physics, Northeastern University, Boston, MA, USA
| | - Lin Chen
- Department of Computer Science and Engineering, The Hong Kong University of Science and Technology, Hong Kong SAR, P. R. China
| | - Arianna Salazar Miranda
- Senseable City Lab, Department of Urban Studies and Planning, Massachusetts Institute of Technology, Cambridge, MA, USA
- School of the Environment, Yale University, New Haven, CT, USA
| | - Marta C González
- Department of Civil and Environmental Engineering, University of California, Berkeley, CA, USA
| | - Michele Tizzoni
- Department of Sociology and Social Research, University of Trento, Trento, Italy
| | - Chaoming Song
- Department of Physics, University of Miami, Coral Gables, FL, USA
| | - Carlo Ratti
- Senseable City Lab, Department of Urban Studies and Planning, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Luis Bettencourt
- Mansueto Institute for Urban Innovation, University of Chicago, Chicago, IL, USA
- Santa Fe Institute, Santa Fe, NM, USA
| | - Yong Li
- Department of Electronic Engineering, Beijing National Research Center for Information Science and Technology (BNRist), Tsinghua University, Beijing, P. R. China.
| | - James Evans
- Santa Fe Institute, Santa Fe, NM, USA.
- Knowledge Lab & Department of Sociology, University of Chicago, Chicago, IL, USA.
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2
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Sajjadi S, Toranj Simin P, Shadmangohar M, Taraktas B, Bayram U, Ruiz-Blondet MV, Karimi F. Structural inequalities exacerbate infection disparities. Sci Rep 2025; 15:9082. [PMID: 40097478 PMCID: PMC11914215 DOI: 10.1038/s41598-025-91008-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2024] [Accepted: 02/17/2025] [Indexed: 03/19/2025] Open
Abstract
During the COVID-19 pandemic, the world witnessed a disproportionate infection rate among marginalized and low-income groups. Despite empirical evidence suggesting that structural inequalities in society contribute to health disparities, there has been little attempt to offer a computational and theoretical explanation to establish its plausibility and quantitative impact. Here, we focus on two aspects of structural inequalities: wealth inequality and social segregation. Our computational model demonstrates that (a) due to the inequality in self-quarantine ability, the infection gap widens between the low-income and high-income groups, and the overall infected cases increase, (b) social segregation between different socioeconomic status (SES) groups intensifies the disease spreading rates, and (c) the second wave of infection can emerge due to a false sense of safety among the medium and high SES groups. By performing two data-driven analyses, one on the empirical network and economic data of 404 metropolitan areas of the United States and one on the daily Covid-19 data of the City of Chicago, we verify that higher segregation leads to an increase in the overall infection cases and higher infection inequality across different ethnic/socioeconomic groups. These findings together demonstrate that reducing structural inequalities not only helps decrease health disparities but also reduces the spread of infectious diseases overall.
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Affiliation(s)
- Sina Sajjadi
- Complexity Science Hub, Vienna, Austria.
- IT:U Interdisciplinary Transformation University Austria, Linz, Austria.
- Central European University, Vienna, Austria.
| | - Pourya Toranj Simin
- INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, Sorbonne Université, Paris, France.
| | | | | | - Ulya Bayram
- Çanakkale Onsekiz Mart University, Çanakkale, Turkey
| | | | - Fariba Karimi
- Complexity Science Hub, Vienna, Austria.
- Graz University of Technology, Graz, Austria.
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3
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Kollepara P, Dey S, Tomko M, Martino E, Bentley R, Tizzoni M, Geard N, Zachreson C. Socioeconomic correlates of urban mobility trends in two Australian cities during transitional periods of the COVID-19 pandemic. ROYAL SOCIETY OPEN SCIENCE 2025; 12:241463. [PMID: 39816732 PMCID: PMC11732406 DOI: 10.1098/rsos.241463] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/27/2024] [Accepted: 11/12/2024] [Indexed: 01/18/2025]
Abstract
During the COVID-19 pandemic, both government-mandated lockdowns and discretionary changes in behaviour combined to produce dramatic and abrupt changes to human mobility patterns. To understand the socioeconomic determinants of intervention compliance and discretionary behavioural responses to epidemic threats, we investigate whether changes in human mobility showed a systematic variation by socioeconomic status during two distinct periods of the COVID-19 pandemic in Australia. We analyse mobility data from two major urban centres and compare the trends during mandated stay-at-home policies and after the full relaxation of nonpharmaceutical interventions, which coincided with a large surge of COVID-19 cases. We analyse data aggregated from de-identified global positioning system trajectories, collated from providers of mobile phone applications and aggregated to small spatial regions. Our results demonstrate systematic decreases in mobility relative to the pre-pandemic baseline with the index of education and occupation, for both pandemic periods. On the other hand, the index of economic resources was not correlated with mobility changes. This result contrasts with observations from other national contexts, where reductions in mobility typically increased strongly with indicators of wealth. Our analysis suggests that economic support policies in place during the initial period of stay-at-home orders in Australia facilitated broad reductions in mobility across the economic spectrum.
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Affiliation(s)
- Pratyush Kollepara
- School of Computing and Information Systems, The University of Melbourne, Parkville, Victoria, Australia
- Department of Mathematical and Physical Sciences, La Trobe University, Melbourne, Victoria, Australia
| | - Subhrasankha Dey
- Department of Built Environment, Aalto University, Espoo, Finland
| | - Martin Tomko
- Department of Infrastructure Engineering, The University of Melbourne, Parkville,Victoria, Australia
| | - Erika Martino
- Centre for Health Policy, Melbourne School of Population and Global Health, The University of Melbourne, Parkville, Victoria, Australia
| | - Rebecca Bentley
- Centre of Research Excellence in Health Housing, Melbourne School of Population and Global Health, The University of Melbourne, Parkville, Victoria, Australia
| | - Michele Tizzoni
- Department of Sociology and Social Research, University of Trento, Trento, Italy
| | - Nicholas Geard
- School of Computing and Information Systems, The University of Melbourne, Parkville, Victoria, Australia
| | - Cameron Zachreson
- School of Computing and Information Systems, The University of Melbourne, Parkville, Victoria, Australia
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4
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Bajaj S, Chen S, Creswell R, Naidoo R, Tsui JLH, Kolade O, Nicholson G, Lehmann B, Hay JA, Kraemer MUG, Aguas R, Donnelly CA, Fowler T, Hopkins S, Cantrell L, Dahal P, White LJ, Stepniewska K, Voysey M, Lambert B. COVID-19 testing and reporting behaviours in England across different sociodemographic groups: a population-based study using testing data and data from community prevalence surveillance surveys. Lancet Digit Health 2024; 6:e778-e790. [PMID: 39455191 DOI: 10.1016/s2589-7500(24)00169-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2023] [Revised: 05/09/2024] [Accepted: 07/16/2024] [Indexed: 10/28/2024]
Abstract
BACKGROUND Understanding underlying mechanisms of heterogeneity in test-seeking and reporting behaviour during an infectious disease outbreak can help to protect vulnerable populations and guide equity-driven interventions. The COVID-19 pandemic probably exerted different stresses on individuals in different sociodemographic groups and ensuring fair access to and usage of COVID-19 tests was a crucial element of England's testing programme. We aimed to investigate the relationship between sociodemographic factors and COVID-19 testing behaviours in England during the COVID-19 pandemic. METHODS We did a population-based study of COVID-19 testing behaviours with mass COVID-19 testing data for England and data from community prevalence surveillance surveys (REACT-1 and ONS-CIS) from Oct 1, 2020, to March 30, 2022. We used mass testing data for lateral flow device (LFD; data for approximately 290 million tests performed and reported) and PCR (data for approximately 107 million tests performed and returned from the laboratory) tests made available for the general public and provided by date and self-reported age and ethnicity at the lower tier local authority (LTLA) level. We also used publicly available data on mean population size estimates for individual LTLAs, and data on ethnic groups, age groups, and deprivation indices for LTLAs. We did not have access to REACT-1 or ONS-CIS prevalence data disaggregated by sex or gender. Using a mechanistic causal model to debias the PCR testing data, we obtained estimates of weekly SARS-CoV-2 prevalence by both self-reported ethnic groups and age groups for LTLAs in England. This approach to debiasing the PCR (or LFD) testing data also estimated a testing bias parameter defined as the odds of testing in infected versus not infected individuals, which would be close to zero if the likelihood of test seeking (or seeking and reporting) was the same regardless of infection status. With confirmatory PCR data, we estimated false positivity rates, sensitivity, specificity, and the rate of decline in detection probability subsequent to reporting a positive LFD for PCR tests by sociodemographic groups. We also estimated the daily incidence, allowing us to calculate the fraction of cases captured by the testing programme. FINDINGS From March, 2021 onwards, individuals in the most deprived regions reported approximately half as many LFD tests per capita as individuals in the least deprived areas (median ratio 0·50 [IQR 0·44-0·54]). During the period October, 2020, to June, 2021, PCR testing patterns showed the opposite trend, with individuals in the most deprived areas performing almost double the number of PCR tests per capita than those in the least deprived areas (1·8 [1·7-1·9]). Infection prevalences in Asian or Asian British individuals were considerably higher than those of other ethnic groups during the alpha (B.1.1.7) and omicron (B.1.1.529) BA.1 waves. Our estimates indicate that the England Pillar 2 COVID-19 testing programme detected 26-40% of all cases (including asymptomatic cases) over the study period with no consistent differences by deprivation levels or ethnic groups. Testing biases for PCR were generally higher than those for LFDs, in line with the general policy of symptomatic and asymptomatic use of these tests. Deprivation and age were associated with testing biases on average; however, the uncertainty intervals overlapped across deprivation levels, although the age-specific patterns were more distinct. We also found that ethnic minorities and older individuals were less likely to use confirmatory PCR tests through most of the pandemic and that delays in reporting a positive LFD test were possibly longer in populations self-reporting as "Black; African; Black British or Caribbean". INTERPRETATION Differences in testing behaviours across sociodemographic groups might be reflective of the higher costs of self-isolation to vulnerable populations, differences in test accessibility, differences in digital literacy, and differing perceptions about the utility of tests and risks posed by infection. This study shows how mass testing data can be used in conjunction with surveillance surveys to identify gaps in the uptake of public health interventions both at fine-scale levels and across sociodemographic groups. It provides a framework for monitoring local interventions and yields valuable lessons for policy makers in ensuring an equitable response to future pandemics. FUNDING UK Health Security Agency.
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Affiliation(s)
- Sumali Bajaj
- Department of Biology, University of Oxford, Oxford, UK.
| | - Siyu Chen
- High Meadows Environmental Institute, Princeton University, Princeton, NJ, USA
| | - Richard Creswell
- Department of Computer Science, University of Oxford, Oxford, UK
| | - Reshania Naidoo
- EY Health Sciences and Wellness, London, UK; Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK
| | | | | | - George Nicholson
- Department of Statistics, University of Oxford, Oxford, UK; The Alan Turing Institute and Royal Statistical Society Health Data Lab, London, UK
| | - Brieuc Lehmann
- The Alan Turing Institute and Royal Statistical Society Health Data Lab, London, UK; Department of Statistical Science, University College London, London, UK
| | - James A Hay
- Pandemic Sciences Institute, University of Oxford, Oxford, UK; Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, Nuffield Department of Medicine, University of Oxford, Oxford, UK
| | - Moritz U G Kraemer
- Department of Biology, University of Oxford, Oxford, UK; Pandemic Sciences Institute, University of Oxford, Oxford, UK
| | - Ricardo Aguas
- Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK
| | - Christl A Donnelly
- Department of Statistics, University of Oxford, Oxford, UK; Pandemic Sciences Institute, University of Oxford, Oxford, UK; MRC Centre for Global Infectious Disease Analysis, Department of Infectious Disease Epidemiology, School of Public Health, Imperial College London, London, UK
| | - Tom Fowler
- UK Health Security Agency, London, UK; William Harvey Research Institute, Queen Mary University of London, London, UK
| | | | - Liberty Cantrell
- Oxford Vaccine Group, Department of Paediatrics, University of Oxford, Oxford, UK
| | - Prabin Dahal
- Infectious Diseases Data Observatory, Nuffield Department of Medicine, University of Oxford, Oxford, UK
| | - Lisa J White
- Department of Biology, University of Oxford, Oxford, UK
| | - Kasia Stepniewska
- Infectious Diseases Data Observatory, Nuffield Department of Medicine, University of Oxford, Oxford, UK
| | - Merryn Voysey
- Oxford Vaccine Group, Department of Paediatrics, University of Oxford, Oxford, UK
| | - Ben Lambert
- Department of Statistics, University of Oxford, Oxford, UK; College of Engineering, Mathematics and Physical Sciences, University of Exeter, Exeter, UK.
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5
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Manna A, Dall’Amico L, Tizzoni M, Karsai M, Perra N. Generalized contact matrices allow integrating socioeconomic variables into epidemic models. SCIENCE ADVANCES 2024; 10:eadk4606. [PMID: 39392883 PMCID: PMC11468902 DOI: 10.1126/sciadv.adk4606] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Accepted: 09/09/2024] [Indexed: 10/13/2024]
Abstract
Variables related to socioeconomic status (SES), including income, ethnicity, and education, shape contact structures and affect the spread of infectious diseases. However, these factors are often overlooked in epidemic models, which typically stratify social contacts by age and interaction contexts. Here, we introduce and study generalized contact matrices that stratify contacts across multiple dimensions. We demonstrate a lower-bound theorem proving that disregarding additional dimensions, besides age and context, might lead to an underestimation of the basic reproductive number. By using SES variables in both synthetic and empirical data, we illustrate how generalized contact matrices enhance epidemic models, capturing variations in behaviors such as heterogeneous levels of adherence to nonpharmaceutical interventions among demographic groups. Moreover, we highlight the importance of integrating SES traits into epidemic models, as neglecting them might lead to substantial misrepresentation of epidemic outcomes and dynamics. Our research contributes to the efforts aiming at incorporating socioeconomic and other dimensions into epidemic modeling.
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Affiliation(s)
- Adriana Manna
- Department of Network and Data Science, Central European University, Vienna, Austria
| | | | - Michele Tizzoni
- Department of Sociology and Social Research, University of Trento, Trento, Italy
| | - Márton Karsai
- Department of Network and Data Science, Central European University, Vienna, Austria
- National Laboratory for Health Security, HUN-REN Rényi Institute of Mathematics, Budapest, Hungary
| | - Nicola Perra
- School of Mathematical Sciences, Queen Mary University of London, London, UK
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Ali S, Li Z, Moqueet N, Moghadas SM, Galvani AP, Cooper LA, Stranges S, Haworth-Brockman M, Pinto AD, Asaria M, Champredon D, Hamilton D, Moulin M, John-Baptiste AA. Incorporating Social Determinants of Health in Infectious Disease Models: A Systematic Review of Guidelines. Med Decis Making 2024; 44:742-755. [PMID: 39305116 PMCID: PMC11491037 DOI: 10.1177/0272989x241280611] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2023] [Accepted: 08/05/2024] [Indexed: 10/20/2024]
Abstract
BACKGROUND Infectious disease (ID) models have been the backbone of policy decisions during the COVID-19 pandemic. However, models often overlook variation in disease risk, health burden, and policy impact across social groups. Nonetheless, social determinants are becoming increasingly recognized as fundamental to the success of control strategies overall and to the mitigation of disparities. METHODS To underscore the importance of considering social heterogeneity in epidemiological modeling, we systematically reviewed ID modeling guidelines to identify reasons and recommendations for incorporating social determinants of health into models in relation to the conceptualization, implementation, and interpretations of models. RESULTS After identifying 1,372 citations, we found 19 guidelines, of which 14 directly referenced at least 1 social determinant. Age (n = 11), sex and gender (n = 5), and socioeconomic status (n = 5) were the most commonly discussed social determinants. Specific recommendations were identified to consider social determinants to 1) improve the predictive accuracy of models, 2) understand heterogeneity of disease burden and policy impact, 3) contextualize decision making, 4) address inequalities, and 5) assess implementation challenges. CONCLUSION This study can support modelers and policy makers in taking into account social heterogeneity, to consider the distributional impact of infectious disease outbreaks across social groups as well as to tailor approaches to improve equitable access to prevention, diagnostics, and therapeutics. HIGHLIGHTS Infectious disease (ID) models often overlook the role of social determinants of health (SDH) in understanding variation in disease risk, health burden, and policy impact across social groups.In this study, we systematically review ID guidelines and identify key areas to consider SDH in relation to the conceptualization, implementation, and interpretations of models.We identify specific recommendations to consider SDH to improve model accuracy, understand heterogeneity, estimate policy impact, address inequalities, and assess implementation challenges.
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Affiliation(s)
- Shehzad Ali
- Department of Epidemiology & Biostatistics, Schulich School of Medicine and Dentistry, Western University, London, ON, Canada
- Centre for Medical Evidence, Decision Integrity & Clinical Impact (MEDICI), Schulich School of Medicine and Dentistry, Western University, London, ON, Canada
- Schulich Interfaculty Program in Public Health, Western University, London, ON, Canada
| | - Zhe Li
- Department of Epidemiology & Biostatistics, Schulich School of Medicine and Dentistry, Western University, London, ON, Canada
- University of Ottawa Heart Institute, Ottawa, ON, Canada
| | | | - Seyed M. Moghadas
- Agent-Based Modelling Laboratory, York University, Toronto, ON, Canada
| | - Alison P. Galvani
- Center for Infectious Disease Modeling and Analysis, Yale School of Public Health, New Haven, CT, USA
| | - Lisa A. Cooper
- Department of Medicine, Johns Hopkins University School of Medicine, USA
- Department of Health, Behavior, and Society, Johns Hopkins Bloomberg School of Public Health, USA
| | - Saverio Stranges
- Department of Epidemiology & Biostatistics, Schulich School of Medicine and Dentistry, Western University, London, ON, Canada
- Department of Clinical Medicine and Surgery, University of Naples Federico II, Italy
| | - Margaret Haworth-Brockman
- Department of Sociology, University of Winnipeg, MB, Canada and National Collaborating Centre for Infectious Diseases, Winnipeg, MB, Canada
| | - Andrew D. Pinto
- Division of Clinical Public Health, Dalla Lana School of Public Health, University of Toronto, Toronto, ON, Canada and Department of Family and Community Medicine, Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada
| | - Miqdad Asaria
- Department of Health Policy, London School of Economics and Political Science, UK
| | - David Champredon
- Public Health Agency of Canada, National Microbiological Laboratory, Guelph, ON, Canada
| | | | - Marc Moulin
- London Health Sciences Centre, London, ON, Canada
- Department of Anesthesia & Perioperative Medicine, Schulich School of Medicine and Dentistry, Western University, London, ON, Canada
| | - Ava A. John-Baptiste
- Department of Epidemiology & Biostatistics, Schulich School of Medicine and Dentistry, Western University, London, ON, Canada
- Centre for Medical Evidence, Decision Integrity & Clinical Impact (MEDICI), Schulich School of Medicine and Dentistry, Western University, London, ON, Canada
- Schulich Interfaculty Program in Public Health, Western University, London, ON, Canada
- Department of Anesthesia & Perioperative Medicine, Schulich School of Medicine and Dentistry, Western University, London, ON, Canada
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7
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Pasquale DK, Welsh W, Bentley-Edwards KL, Olson A, Wellons MC, Moody J. Homophily and social mixing in a small community: Implications for infectious disease transmission. PLoS One 2024; 19:e0303677. [PMID: 38805519 PMCID: PMC11132460 DOI: 10.1371/journal.pone.0303677] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Accepted: 04/29/2024] [Indexed: 05/30/2024] Open
Abstract
Community mixing patterns by sociodemographic traits can inform the risk of epidemic spread among groups, and the balance of in- and out-group mixing affects epidemic potential. Understanding mixing patterns can provide insight about potential transmission pathways throughout a community. We used a snowball sampling design to enroll people recently diagnosed with SARS-CoV-2 in an ethnically and racially diverse county and asked them to describe their close contacts and recruit some contacts to enroll in the study. We constructed egocentric networks of the participants and their contacts and assessed age-mixing, ethnic/racial homophily, and gender homophily. The total size of the egocentric networks was 2,544 people (n = 384 index cases + n = 2,160 recruited peers or other contacts). We observed high rates of in-group mixing among ethnic/racial groups compared to the ethnic/racial proportions of the background population. Black or African-American respondents interacted with a wider range of ages than other ethnic/racial groups, largely due to familial relationships. The egocentric networks of non-binary contacts had little age diversity. Black or African-American respondents in particular reported mixing with older or younger family members, which could increase the risk of transmission to vulnerable age groups. Understanding community mixing patterns can inform infectious disease risk, support analyses to predict epidemic size, or be used to design campaigns such as vaccination strategies so that community members who have vulnerable contacts are prioritized.
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Affiliation(s)
- Dana K. Pasquale
- Department of Population Health Sciences, Duke University School of Medicine, Durham, North Carolina, United States of America
- Department of Sociology, Duke University, Durham, North Carolina, United States of America
- Duke Network Analysis Center, Social Science Research Institute, Duke University, Durham, North Carolina, United States of America
| | - Whitney Welsh
- Social Science Research Institute, Duke University, Durham, North Carolina, United States of America
| | - Keisha L. Bentley-Edwards
- Samuel DuBois Cook Center on Social Equity, Duke University, Durham, North Carolina, United States of America
| | - Andrew Olson
- Duke AI Health, Duke University School of Medicine, Durham, North Carolina, United States of America
| | - Madelynn C. Wellons
- Department of Sociology, Duke University, Durham, North Carolina, United States of America
- Duke Network Analysis Center, Social Science Research Institute, Duke University, Durham, North Carolina, United States of America
| | - James Moody
- Department of Sociology, Duke University, Durham, North Carolina, United States of America
- Duke Network Analysis Center, Social Science Research Institute, Duke University, Durham, North Carolina, United States of America
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8
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Manna A, Koltai J, Karsai M. Importance of social inequalities to contact patterns, vaccine uptake, and epidemic dynamics. Nat Commun 2024; 15:4137. [PMID: 38755162 PMCID: PMC11099065 DOI: 10.1038/s41467-024-48332-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Accepted: 04/29/2024] [Indexed: 05/18/2024] Open
Abstract
Individuals' socio-demographic and economic characteristics crucially shape the spread of an epidemic by largely determining the exposure level to the virus and the severity of the disease for those who got infected. While the complex interplay between individual characteristics and epidemic dynamics is widely recognised, traditional mathematical models often overlook these factors. In this study, we examine two important aspects of human behaviour relevant to epidemics: contact patterns and vaccination uptake. Using data collected during the COVID-19 pandemic in Hungary, we first identify the dimensions along which individuals exhibit the greatest variation in their contact patterns and vaccination uptake. We find that generally higher socio-economic groups of the population have a higher number of contacts and a higher vaccination uptake with respect to disadvantaged groups. Subsequently, we propose a data-driven epidemiological model that incorporates these behavioural differences. Finally, we apply our model to analyse the fourth wave of COVID-19 in Hungary, providing valuable insights into real-world scenarios. By bridging the gap between individual characteristics and epidemic spread, our research contributes to a more comprehensive understanding of disease dynamics and informs effective public health strategies.
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Affiliation(s)
- Adriana Manna
- Department of Network and Data Science, Central European University, Quellenstraße 51, Vienna, 1100, Austria
| | - Júlia Koltai
- National Laboratory for Health Security, HUN-REN Centre for Social Sciences, Tóth Kálmán utca 4, Budapest, 1097, Hungary
- Department of Social Research Methodology, Faculty of Social Sciences, Eötvös Loránd University, Pázmány Péter sétány 1/A, Budapest, 1117, Hungary
| | - Márton Karsai
- Department of Network and Data Science, Central European University, Quellenstraße 51, Vienna, 1100, Austria.
- National Laboratory for Health Security, HUN-REN Rényi Institute of Mathematics, Reáltanoda utca 13-15, Budapest, 1053, Hungary.
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9
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Zachreson C, Savulescu J, Shearer FM, Plank MJ, Coghlan S, Miller JC, Ainslie KEC, Geard N. Ethical frameworks should be applied to computational modelling of infectious disease interventions. PLoS Comput Biol 2024; 20:e1011933. [PMID: 38512898 PMCID: PMC10956870 DOI: 10.1371/journal.pcbi.1011933] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/23/2024] Open
Abstract
This perspective is part of an international effort to improve epidemiological models with the goal of reducing the unintended consequences of infectious disease interventions. The scenarios in which models are applied often involve difficult trade-offs that are well recognised in public health ethics. Unless these trade-offs are explicitly accounted for, models risk overlooking contested ethical choices and values, leading to an increased risk of unintended consequences. We argue that such risks could be reduced if modellers were more aware of ethical frameworks and had the capacity to explicitly account for the relevant values in their models. We propose that public health ethics can provide a conceptual foundation for developing this capacity. After reviewing relevant concepts in public health and clinical ethics, we discuss examples from the COVID-19 pandemic to illustrate the current separation between public health ethics and infectious disease modelling. We conclude by describing practical steps to build the capacity for ethically aware modelling. Developing this capacity constitutes a critical step towards ethical practice in computational modelling of public health interventions, which will require collaboration with experts on public health ethics, decision support, behavioural interventions, and social determinants of health, as well as direct consultation with communities and policy makers.
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Affiliation(s)
- Cameron Zachreson
- School of Computing and Information Systems, The University of Melbourne, Parkville, Victoria, Australia
| | - Julian Savulescu
- Centre for Biomedical Ethics, Yong Loo Lin School of Medicine, National University of Singapore, Singapore
- Biomedical Research Group, Murdoch Childrens Research Institute, Melbourne, Victoria, Australia
- Faculty of Philosophy, University of Oxford, Oxford, United Kingdom
| | - Freya M. Shearer
- Infectious Disease Dynamics Unit, Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global Health, The University of Melbourne, Parkville, Victoria, Australia
| | - Michael J. Plank
- School of Mathematics and Statistics, University of Canterbury, Christchurch, New Zealand
| | - Simon Coghlan
- School of Computing and Information Systems, The University of Melbourne, Parkville, Victoria, Australia
- Centre for AI and Digital Ethics, The University of Melbourne, Parkville, Victoria, Australia
| | - Joel C. Miller
- Department of Mathematical and Physical Sciences, La Trobe University, Bundoora, Australia
| | - Kylie E. C. Ainslie
- Centre for Infectious Disease Control, National Institute for Public Health and the Environment, Bilthoven, the Netherlands
- School of Public Health, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong Special Administrative Region, China
| | - Nicholas Geard
- School of Computing and Information Systems, The University of Melbourne, Parkville, Victoria, Australia
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Pangallo M, Aleta A, Del Rio-Chanona RM, Pichler A, Martín-Corral D, Chinazzi M, Lafond F, Ajelli M, Moro E, Moreno Y, Vespignani A, Farmer JD. The unequal effects of the health-economy trade-off during the COVID-19 pandemic. Nat Hum Behav 2024; 8:264-275. [PMID: 37973827 PMCID: PMC10896714 DOI: 10.1038/s41562-023-01747-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Accepted: 10/05/2023] [Indexed: 11/19/2023]
Abstract
Despite the global impact of the coronavirus disease 2019 pandemic, the question of whether mandated interventions have similar economic and public health effects as spontaneous behavioural change remains unresolved. Addressing this question, and understanding differential effects across socioeconomic groups, requires building quantitative and fine-grained mechanistic models. Here we introduce a data-driven, granular, agent-based model that simulates epidemic and economic outcomes across industries, occupations and income levels. We validate the model by reproducing key outcomes of the first wave of coronavirus disease 2019 in the New York metropolitan area. The key mechanism coupling the epidemic and economic modules is the reduction in consumption due to fear of infection. In counterfactual experiments, we show that a similar trade-off between epidemic and economic outcomes exists both when individuals change their behaviour due to fear of infection and when non-pharmaceutical interventions are imposed. Low-income workers, who perform in-person occupations in customer-facing industries, face the strongest trade-off.
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Affiliation(s)
| | - Alberto Aleta
- Institute for Biocomputation and Physics of Complex Systems and Department of Theoretical Physics, University of Zaragoza, Zaragoza, Spain
| | | | | | - David Martín-Corral
- Department of Mathematics and GISC, Universidad Carlos III de Madrid, Leganes, Spain
| | - Matteo Chinazzi
- MOBS Lab, Northeastern University, Boston, MA, USA
- The Roux Institute, Northeastern University, Portland, ME, USA
| | - François Lafond
- Institute for New Economic Thinking at the Oxford Martin School, and Smith School of Enterprise and the Environment, University of Oxford, Oxford, UK
| | - Marco Ajelli
- Laboratory for Computational Epidemiology and Public Health, Department of Epidemiology and Biostatistics, Indiana University School of Public Health, Bloomington, IN, USA
| | - Esteban Moro
- Department of Mathematics and GISC, Universidad Carlos III de Madrid, Leganes, Spain
- Connection Science, Institute for Data Science and Society, MIT, Cambridge, MA, USA
| | - Yamir Moreno
- CENTAI Institute, Turin, Italy
- Institute for Biocomputation and Physics of Complex Systems and Department of Theoretical Physics, University of Zaragoza, Zaragoza, Spain
- Complexity Science Hub, Vienna, Austria
| | | | - J Doyne Farmer
- Institute for New Economic Thinking at the Oxford Martin School, and Smith School of Enterprise and the Environment, University of Oxford, Oxford, UK
- Santa Fe Institute, Santa Fe, NM, USA
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11
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Sabbatini CE, Pullano G, Di Domenico L, Rubrichi S, Bansal S, Colizza V. The impact of spatial connectivity on NPIs effectiveness. BMC Infect Dis 2024; 24:21. [PMID: 38166649 PMCID: PMC10763474 DOI: 10.1186/s12879-023-08900-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2023] [Accepted: 12/12/2023] [Indexed: 01/05/2024] Open
Abstract
BACKGROUND France implemented a combination of non-pharmaceutical interventions (NPIs) to manage the COVID-19 pandemic between September 2020 and June 2021. These included a lockdown in the fall 2020 - the second since the start of the pandemic - to counteract the second wave, followed by a long period of nighttime curfew, and by a third lockdown in the spring 2021 against the Alpha wave. Interventions have so far been evaluated in isolation, neglecting the spatial connectivity between regions through mobility that may impact NPI effectiveness. METHODS Focusing on September 2020-June 2021, we developed a regionally-based epidemic metapopulation model informed by observed mobility fluxes from daily mobile phone data and fitted the model to regional hospital admissions. The model integrated data on vaccination and variants spread. Scenarios were designed to assess the impact of the Alpha variant, characterized by increased transmissibility and risk of hospitalization, of the vaccination campaign and alternative policy decisions. RESULTS The spatial model better captured the heterogeneity observed in the regional dynamics, compared to models neglecting inter-regional mobility. The third lockdown was similarly effective to the second lockdown after discounting for immunity, Alpha, and seasonality (51% vs 52% median regional reduction in the reproductive number R0, respectively). The 6pm nighttime curfew with bars and restaurants closed, implemented in January 2021, substantially reduced COVID-19 transmission. It initially led to 49% median regional reduction of R0, decreasing to 43% reduction by March 2021. In absence of vaccination, implemented interventions would have been insufficient against the Alpha wave. Counterfactual scenarios proposing a sequence of lockdowns in a stop-and-go fashion would have reduced hospitalizations and restriction days for low enough thresholds triggering and lifting restrictions. CONCLUSIONS Spatial connectivity induced by mobility impacted the effectiveness of interventions especially in regions with higher mobility rates. Early evening curfew with gastronomy sector closed allowed authorities to delay the third wave. Stop-and-go lockdowns could have substantially lowered both healthcare and societal burdens if implemented early enough, compared to the observed application of lockdown-curfew-lockdown, but likely at the expense of several labor sectors. These findings contribute to characterize the effectiveness of implemented strategies and improve pandemic preparedness.
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Affiliation(s)
- Chiara E Sabbatini
- Sorbonne Université, INSERM, Pierre Louis Institute of Epidemiology and Public Health, Paris, France
| | - Giulia Pullano
- Department of Biology, Georgetown University, Washington, DC, USA
| | - Laura Di Domenico
- Sorbonne Université, INSERM, Pierre Louis Institute of Epidemiology and Public Health, Paris, France
| | - Stefania Rubrichi
- Orange Labs, Sociology and Economics of Networks and Services (SENSE), Chatillon, France
| | - Shweta Bansal
- Department of Biology, Georgetown University, Washington, DC, USA
| | - Vittoria Colizza
- Sorbonne Université, INSERM, Pierre Louis Institute of Epidemiology and Public Health, Paris, France.
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12
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Napoli L, Sekara V, García-Herranz M, Karsai M. Socioeconomic reorganization of communication and mobility networks in response to external shocks. Proc Natl Acad Sci U S A 2023; 120:e2305285120. [PMID: 38060564 PMCID: PMC10723118 DOI: 10.1073/pnas.2305285120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Accepted: 10/23/2023] [Indexed: 12/17/2023] Open
Abstract
Socioeconomic segregation patterns in networks usually evolve gradually, yet they can change abruptly in response to external shocks. The recent COVID-19 pandemic and the subsequent government policies induced several interruptions in societies, potentially disadvantaging the socioeconomically most vulnerable groups. Using large-scale digital behavioral observations as a natural laboratory, here we analyze how lockdown interventions lead to the reorganization of socioeconomic segregation patterns simultaneously in communication and mobility networks in Sierra Leone. We find that while segregation in mobility clearly increased during lockdown, the social communication network reorganized into a less segregated configuration as compared to reference periods. Moreover, due to differences in adaption capacities, the effects of lockdown policies varied across socioeconomic groups, leading to different or even opposite segregation patterns between the lower and higher socioeconomic classes. Such secondary effects of interventions need to be considered for better and more equitable policies.
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Affiliation(s)
- Ludovico Napoli
- Department of Network and Data Science, Central European University, Vienna110Austria
| | - Vedran Sekara
- Department of Computer Science, Information Technology, University of Copenaghen, Copenhagen2300, Denmark
| | - Manuel García-Herranz
- Frontier Data Tech Unit, Chief Data Office, United Nations International Children’s Emergency Fund, New York, NY10017
| | - Márton Karsai
- Department of Network and Data Science, Central European University, Vienna110Austria
- National Laboratory for Health Security, Alfréd Rényi Institute of Mathematics, Budapest1053, Hungary
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13
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Kiani B, Lau C, Bergquist R. From Snow's map of cholera transmission to dynamic catchment boundary delineation: current front lines in spatial analysis. GEOSPATIAL HEALTH 2023; 18. [PMID: 37905966 DOI: 10.4081/gh.2023.1247] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Indexed: 11/02/2023]
Abstract
The history of mapping infectious diseases dates back to the 19th century when Dr John Snow utilised spatial analysis to pinpoint the source of the 1854 cholera outbreak in London, a ground-breaking work that laid the foundation for modern epidemiology and disease mapping (Newsom, 2006). As technology advanced, so did mapping techniques. In the late 20th century, geographic information systems (GIS) revolutionized disease mapping by enabling researchers to overlay diverse datasets to visualise and analyse complex spatial patterns (Bergquist & Manda 2019; Hashtarkhani et al., 2021). The COVID-19 pandemic showed that disease mapping is particularly valuable for optimising prevention and control strategies of infectious diseases by prioritising geographical targeting interventions and containment strategies (Mohammadi et al., 2021). Today, with the aid of highresolution satellite imagery, geo-referenced electronic data collection systems, real-time data feeds, and sophisticated modelling algorithms, disease mapping has become a feasible and accessible tool for public health officials in tracking, managing, and mitigating the spread of infectious diseases at global, regional and local scales (Hay et al., 2013). [...].
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Affiliation(s)
- Behzad Kiani
- UQ Centre for Clinical Research, Faculty of Medicine, The University of Queensland, Brisbane.
| | - Colleen Lau
- UQ Centre for Clinical Research, Faculty of Medicine, The University of Queensland, Brisbane.
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14
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Meena P, Abdellatif D, Tiwari V, Chatterjee S, Luyckx VA. Health Systems Preparedness for Infectious Disease Outbreaks: Relevance for Nephrology. Semin Nephrol 2023; 43:151465. [PMID: 38199828 DOI: 10.1016/j.semnephrol.2023.151465] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2024]
Abstract
The coronavirus disease (COVID-19) crisis glaringly highlighted the critical need to develop resilient health care systems that are better prepared for epidemics. Millions of people died from COVID-19 itself, but almost three times as many died from health system disruptions. People living with kidney disease are highly vulnerable during outbreaks and pandemics and their needs must be included in preparedness planning. Health systems preparedness requires not only early identification and containment of outbreaks and maintenance of critical services during crises, but also bolstering population resilience and ensuring the safety of both health personnel and patients. Planning for surge capacity in an outbreak must include provision for both acute and chronic dialysis, and ensure access to medications for people with kidney diseases. Quality of care should not be compromised and must be monitored and improved where necessary. Technology, such as telemedicine, can support quality and continuity of care and minimize infection risks. Communication at all levels is crucial to ensure all stakeholders, including communities, have the necessary information to support cooperation and collaboration in effective outbreak responses. Research is important during and after pandemics to improve knowledge and build resilience at all levels, from outbreak detection to the development of therapeutics and optimizing equity in access to interventions. Only with adequate preparation and more resilient health systems can we hope, as a global community, to build on the harsh lessons learned during COVID-19, and improve the response to the next infectious disease outbreak, epidemic, or even pandemic.
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Affiliation(s)
- Priti Meena
- Department of Nephrology, All India Institute of Medical Sciences, Bhubaneswar, India
| | | | - Vaibhav Tiwari
- Institute of Renal Sciences, Sir Ganga Ram Hospital, New Delhi, India
| | | | - Valerie A Luyckx
- Department of Public and Global Health, Epidemiology, Biostatistics and Prevention Institute, University of Zurich, Zurich, Switzerland; Renal Division, Brigham and Women's Hospital, Harvard Medical School, Boston, MA; Department of Paediatrics and Child Health, University of Cape Town, Cape Town, South Africa.
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15
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Pomeroy LW, Magsi S, McGill S, Wheeler CE. Mumps epidemic dynamics in the United States before vaccination (1923-1932). Epidemics 2023; 44:100700. [PMID: 37379775 PMCID: PMC11057333 DOI: 10.1016/j.epidem.2023.100700] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2022] [Revised: 04/25/2023] [Accepted: 06/12/2023] [Indexed: 06/30/2023] Open
Abstract
Mumps is a vaccine-preventable, reemerging, and highly transmissible infectious disease. Widespread vaccination dramatically reduced cases; however, case counts have been increasing over the past 20 years. To provide a quantitative overview of historical mumps dynamics that can act as baseline information to help identify causes of mumps reemergence, we analyzed timeseries of cases reported from 1923 to 1932 in the United States. During that time, 239,230 mumps cases were reported in 70 cities. Larger cities reported annual epidemics and smaller cities reported intermittent, sporadic outbreaks. The critical community size above which transmission continuously occurred was likely between 365,583 and 781,188 individuals but could range as high as 3,376,438 individuals. Mumps cases increased as city size increased, suggesting density-dependent transmission. Using a density-dependent SEIR model, we calculated a mean effective reproductive number (Re) of 1.2. Re varied by city and over time, with periodic high values that could characterize short periods of very high transmission known as superspreading events. Case counts most often peaked in March, with higher-than-average transmission from December through April and showed a correlation with weekly births. While certain city pairs in Midwestern states had synchronous outbreaks, most outbreaks were less synchronous and not driven by distance between cities. This work demonstrates the importance of long-term infectious disease surveillance data and will inform future studies on mumps reemergence and control.
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Affiliation(s)
- Laura W Pomeroy
- Division of Environmental Health Sciences, College of Public Health, Ohio State University, Columbus, OH 43210, USA; Translational Data Analytics Institute, Ohio State University, Columbus, OH 43210, USA.
| | - Senya Magsi
- College of Public Health, Ohio State University, Columbus, OH 43210, USA
| | - Shannon McGill
- College of Public Health, Ohio State University, Columbus, OH 43210, USA
| | - Caroline E Wheeler
- Computer & Information Science, College of Arts and Sciences, Ohio State University, Columbus, OH 43210, USA
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16
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Larsen SL, Shin I, Joseph J, West H, Anorga R, Mena GE, Mahmud AS, Martinez PP. Quantifying the impact of SARS-CoV-2 temporal vaccination trends and disparities on disease control. SCIENCE ADVANCES 2023; 9:eadh9920. [PMID: 37531439 PMCID: PMC10396293 DOI: 10.1126/sciadv.adh9920] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Accepted: 06/30/2023] [Indexed: 08/04/2023]
Abstract
SARS-CoV-2 vaccines have been distributed at unprecedented speed. Still, little is known about temporal vaccination trends, their association with socioeconomic inequality, and their consequences for disease control. Using data from 161 countries/territories and 58 states, we examined vaccination rates across high and low socioeconomic status (SES), showing that disparities in coverage exist at national and subnational levels. We also identified two distinct vaccination trends: a rapid initial rollout, quickly reaching a plateau, or sigmoidal and slow to begin. Informed by these patterns, we implemented an SES-stratified mechanistic model, finding profound differences in mortality and incidence across these two vaccination types. Timing of initial rollout affects disease outcomes more substantially than final coverage or degree of SES disparity. Unexpectedly, timing is not associated with wealth inequality or GDP per capita. While socioeconomic disparity should be addressed, accelerating initial rollout for all over focusing on increasing coverage is an accessible intervention that could minimize the burden of disease across socioeconomic groups.
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Affiliation(s)
- Sophie L. Larsen
- Program in Ecology, Evolution, and Conservation Biology, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Ikgyu Shin
- Department of Statistics, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Jefrin Joseph
- Department of Microbiology, School of Molecular and Cellular Biology, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Haylee West
- Department of Microbiology, School of Molecular and Cellular Biology, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Rafael Anorga
- Division of Epidemiology and Biostatistics, School of Public Health, University of Illinois Chicago, Chicago, IL, USA
| | | | - Ayesha S. Mahmud
- Department of Demography, University of California, Berkeley, CA, USA
| | - Pamela P. Martinez
- Department of Statistics, University of Illinois Urbana-Champaign, Urbana, IL, USA
- Department of Microbiology, School of Molecular and Cellular Biology, University of Illinois Urbana-Champaign, Urbana, IL, USA
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17
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Gozzi N, Comini N, Perra N. The adoption of non-pharmaceutical interventions and the role of digital infrastructure during the COVID-19 pandemic in Colombia, Ecuador, and El Salvador. EPJ DATA SCIENCE 2023; 12:18. [PMID: 37305560 PMCID: PMC10243255 DOI: 10.1140/epjds/s13688-023-00395-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Accepted: 05/30/2023] [Indexed: 06/13/2023]
Abstract
Adherence to the non-pharmaceutical interventions (NPIs) put in place to mitigate the spreading of infectious diseases is a multifaceted problem. Several factors, including socio-demographic and socio-economic attributes, can influence the perceived susceptibility and risk which are known to affect behavior. Furthermore, the adoption of NPIs is dependent upon the barriers, real or perceived, associated with their implementation. Here, we study the determinants of NPIs adherence during the first wave of the COVID-19 Pandemic in Colombia, Ecuador, and El Salvador. Analyses are performed at the level of municipalities and include socio-economic, socio-demographic, and epidemiological indicators. Furthermore, by leveraging a unique dataset comprising tens of millions of internet Speedtest® measurements from Ookla®, we investigate the quality of the digital infrastructure as a possible barrier to adoption. We use mobility changes provided by Meta as a proxy of adherence to NPIs and find a significant correlation between mobility drops and digital infrastructure quality. The relationship remains significant after controlling for several factors. This finding suggests that municipalities with better internet connectivity were able to afford higher mobility reductions. We also find that mobility reductions were more pronounced in larger, denser, and wealthier municipalities. Supplementary Information The online version contains supplementary material available at 10.1140/epjds/s13688-023-00395-5.
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Affiliation(s)
- Nicolò Gozzi
- Networks and Urban Systems Centre, University of Greenwich, London, UK
- ISI Foundation, Turin, Italy
| | | | - Nicola Perra
- School of Mathematical Sciences, Queen Mary University of London, London, UK
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18
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Luca M, Campedelli GM, Centellegher S, Tizzoni M, Lepri B. Crime, inequality and public health: a survey of emerging trends in urban data science. Front Big Data 2023; 6:1124526. [PMID: 37303974 PMCID: PMC10248183 DOI: 10.3389/fdata.2023.1124526] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Accepted: 05/10/2023] [Indexed: 06/13/2023] Open
Abstract
Urban agglomerations are constantly and rapidly evolving ecosystems, with globalization and increasing urbanization posing new challenges in sustainable urban development well summarized in the United Nations' Sustainable Development Goals (SDGs). The advent of the digital age generated by modern alternative data sources provides new tools to tackle these challenges with spatio-temporal scales that were previously unavailable with census statistics. In this review, we present how new digital data sources are employed to provide data-driven insights to study and track (i) urban crime and public safety; (ii) socioeconomic inequalities and segregation; and (iii) public health, with a particular focus on the city scale.
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Affiliation(s)
- Massimiliano Luca
- Mobile and Social Computing Lab, Bruno Kessler Foundation, Trento, Italy
- Faculty of Computer Science, Free University of Bolzano, Bolzano, Italy
| | | | | | - Michele Tizzoni
- Department of Sociology and Social Research, University of Trento, Trento, Italy
| | - Bruno Lepri
- Mobile and Social Computing Lab, Bruno Kessler Foundation, Trento, Italy
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19
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Showalter E, Vigil-Hayes M, Zegura E, Sutton R, Belding E. Pandemic-influenced human mobility on tribal lands in California: Data sparsity and analytical precision. PLoS One 2022; 17:e0276644. [PMID: 36516118 PMCID: PMC9750007 DOI: 10.1371/journal.pone.0276644] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Accepted: 10/11/2022] [Indexed: 12/15/2022] Open
Abstract
Human mobility datasets collected from personal mobile device locations are integral to understanding how states, counties, and cities have collectively adapted to pervasive social disruption stemming from the COVID-19 pandemic. However, while indigenous tribal communities in the United States have been disproportionately devastated by the pandemic, the relatively sparse populations and data available in these hard-hit tribal areas often exclude them from mobility studies. We explore the effects of sparse mobility data in untangling the often inter-correlated relationship between human mobility, distancing orders, and case growth throughout 2020 in tribal and rural areas of California. Our findings account for data sparsity imprecision to show: 1) Mobility through legal tribal boundaries was unusually low but still correlated highly with case growth; 2) Case growth correlated less strongly with mobility later in the the year in all areas; and 3) State-mandated distancing orders later in the year did not necessarily precede lower mobility medians, especially in tribal areas. It is our hope that with more timely feedback offered by mobile device datasets even in sparse areas, health policy makers can better plan health emergency responses that still keep the economy vibrant across all sectors.
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Affiliation(s)
- Esther Showalter
- Computer Science Dept, University of California, Santa Barbara, California, United States of America
| | - Morgan Vigil-Hayes
- School of Informatics, Computing, and Cybersystems, Northern Arizona University, Flagstaff, Arizona, United States of America
| | - Ellen Zegura
- College of Computing, Georgia Institute of Technology, Atlanta, Georgia, United States of America
| | - Richard Sutton
- Skyhook, Boston, Massachusetts, United States of America
| | - Elizabeth Belding
- Computer Science Dept, University of California, Santa Barbara, California, United States of America
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20
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Gozzi N, Chinazzi M, Dean NE, Longini IM, Halloran ME, Perra N, Vespignani A. Estimating the impact of COVID-19 vaccine allocation inequities: a modeling study. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2022:2022.11.18.22282514. [PMID: 36415459 PMCID: PMC9681050 DOI: 10.1101/2022.11.18.22282514] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
Access to COVID-19 vaccines on the global scale has been drastically impacted by structural socio-economic inequities. Here, we develop a data-driven, age-stratified epidemic model to evaluate the effects of COVID-19 vaccine inequities in twenty lower middle and low income countries (LMIC) sampled from all WHO regions. We focus on the first critical months of vaccine distribution and administration, exploring counterfactual scenarios where we assume the same per capita daily vaccination rate reported in selected high income countries. We estimate that, in this high vaccine availability scenario, more than 50% of deaths (min-max range: [56% - 99%]) that occurred in the analyzed countries could have been averted. We further consider a scenario where LMIC had similarly early access to vaccine doses as high income countries; even without increasing the number of doses, we estimate an important fraction of deaths (min-max range: [7% - 73%]) could have been averted. In the absence of equitable allocation, the model suggests that considerable additional non-pharmaceutical interventions would have been required to offset the lack of vaccines (min-max range: [15% - 75%]). Overall, our results quantify the negative impacts of vaccines inequities and call for amplified global efforts to provide better access to vaccine programs in low and lower middle income countries.
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21
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Marchetti S, Borin A, Conteduca FP, Ilardi G, Guzzetta G, Poletti P, Pezzotti P, Bella A, Stefanelli P, Riccardo F, Merler S, Brandolini A, Brusaferro S. An epidemic model for SARS-CoV-2 with self-adaptive containment measures. PLoS One 2022; 17:e0272009. [PMID: 35877667 PMCID: PMC9312378 DOI: 10.1371/journal.pone.0272009] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Accepted: 07/12/2022] [Indexed: 11/25/2022] Open
Abstract
During the COVID-19 pandemic, several countries have resorted to self-adaptive mechanisms that tailor non-pharmaceutical interventions to local epidemiological and health care indicators. These mechanisms reinforce the mutual influence between containment measures and the evolution of the epidemic. To account for such interplay, we develop an epidemiological model that embeds an algorithm mimicking the self-adaptive policy mechanism effective in Italy between November 2020 and March 2022. This extension is key to tracking the historical evolution of health outcomes and restrictions in Italy. Focusing on the epidemic wave that started in mid-2021 after the diffusion of Delta, we compare the functioning of alternative mechanisms to show how the policy framework may affect the trade-off between health outcomes and the restrictiveness of mitigation measures. Mechanisms based on the reproduction number are generally highly responsive to early signs of a surging wave but entail severe restrictions. The emerging trade-off varies considerably depending on specific conditions (e.g., vaccination coverage), with less-reactive mechanisms (e.g., those based on occupancy rates) becoming more appealing in favorable contexts.
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Affiliation(s)
- Sabina Marchetti
- Directorate General for Economics, Statistics and Research, Bank of Italy, Rome, Italy
| | - Alessandro Borin
- Directorate General for Economics, Statistics and Research, Bank of Italy, Rome, Italy
| | | | - Giuseppe Ilardi
- Directorate General for Economics, Statistics and Research, Bank of Italy, Rome, Italy
| | - Giorgio Guzzetta
- Center for Health Emergencies, Bruno Kessler Foundation (FBK), Trento, Italy
| | - Piero Poletti
- Center for Health Emergencies, Bruno Kessler Foundation (FBK), Trento, Italy
| | - Patrizio Pezzotti
- Department of Infectious Diseases, Italian National Institute of Health (Istituto Superiore di Sanità), Rome, Italy
| | - Antonino Bella
- Department of Infectious Diseases, Italian National Institute of Health (Istituto Superiore di Sanità), Rome, Italy
| | - Paola Stefanelli
- Department of Infectious Diseases, Italian National Institute of Health (Istituto Superiore di Sanità), Rome, Italy
| | - Flavia Riccardo
- Department of Infectious Diseases, Italian National Institute of Health (Istituto Superiore di Sanità), Rome, Italy
| | - Stefano Merler
- Center for Health Emergencies, Bruno Kessler Foundation (FBK), Trento, Italy
| | - Andrea Brandolini
- Directorate General for Economics, Statistics and Research, Bank of Italy, Rome, Italy
| | - Silvio Brusaferro
- Italian National Institute of Health (Istituto Superiore di Sanità), Rome, Italy
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