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Arcega Castillo G, Backus LH, Gouge D, Li L, Walker K, Foley J. Diversity of Ticks and Rickettsiae in the Southwestern United States: Implications for Public Health. Vector Borne Zoonotic Dis 2025; 25:240-249. [PMID: 40040524 DOI: 10.1089/vbz.2024.0102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/06/2025] Open
Abstract
Background: Surveillance is important in addressing the significant public health concerns posed by tick-borne diseases. However, the southwestern U.S. presents particular challenges due to diverse tick fauna and varied ecologies. Methods: From 2021 to 2022, we conducted a partner-based tick surveillance program in Arizona and California to assess the presence of Rickettsia spp. pathogens and species composition of tick vectors. Results: A total of 913 ticks was collected, comprising in descending abundance Rhipicephalus sanguineus, Dermacentor similis, Ixodes pacificus (I. pacificus), Argas sp., Otobius megnini, and Haemaphysalis leporispalustris. Arizona submitted predominantly brown dog ticks (90.05% of all ticks from Arizona), while California showed greater tick species richness with five species identified. No Rickettsia rickettsii was detected, but a variety of other Rickettsia spp. was found in ticks from both Arizona and California and included Rickettsia rhipicephali (R. rhipicephali), Rickettsia massiliae, and Rickettsia monacensis-like rickettsial agents of I. pacificus, and two rickettsial organisms that were not identified to species: one Rickettsia montanensis or Rickettsia raoultii-like, and the other most similar to Candidatus Rickettsia tarasevichiae (R. tarasevichiae). Conclusion: This research contributes to our understanding of tickborne diseases in the southwestern U.S., and emphasizes the need for targeted surveillance and intervention initiatives in a region with complex relationships among ticks, hosts, and Rickettsia species. In particular, the finding of an apparently novel pairing of an unknown Argas sp. tick and R. tarasevichiae-like organism suggests that argasid species are an important target for future research. In addition, the results-both tick species submitted and resulting Rickettsia spp. identified-highlights the strengths and potential biases associated with a partner-based sampling method for tick surveillance.
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Affiliation(s)
- Guillermo Arcega Castillo
- Department of Medicine and Epidemiology, School of Veterinary Medicine, University of California, Davis, California, USA
| | - Laura H Backus
- Department of Medicine and Epidemiology, School of Veterinary Medicine, University of California, Davis, California, USA
| | - Dawn Gouge
- Department of Entomology, University of Arizona, Tucson, Arizona, USA
| | - Lucy Li
- Department of Entomology, University of Arizona, Tucson, Arizona, USA
| | - Kathleen Walker
- Department of Entomology, University of Arizona, Tucson, Arizona, USA
| | - Janet Foley
- Department of Medicine and Epidemiology, School of Veterinary Medicine, University of California, Davis, California, USA
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Alvarez-Londoño J, Martínez-Sánchez ET, Ramírez-Chaves HE, Castaño-Villa GJ, Rivera-Páez FA. A "One health" approach to the understanding of mammals, ticks and Rickettsia interactions in the Andes of Colombia. Acta Trop 2024; 260:107415. [PMID: 39349235 DOI: 10.1016/j.actatropica.2024.107415] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2024] [Revised: 09/26/2024] [Accepted: 09/27/2024] [Indexed: 10/02/2024]
Abstract
Infectious diseases, especially zoonotic, represent a significant global threat to both human and animal health. Ticks are among the primary vectors of pathogens affecting wild and domestic animals, some of which can also cause severe human diseases. To effectively face zoonotic diseases, the "One Health" approach is being promoted to integrate the health of human, animals, and ecosystems. Here, we identify the associations between ticks, rickettsiae, wild and domestic mammals, and humans in the Andean region of Colombia. A total of 366 ticks of 17 species belonging to the genera Amblyomma, Dermacentor, Ixodes, Ornithodoros, and Rhipicephalus were collected as free-living organisms, or parasitizing humans, wild (22 species) and domestic (3 species) mammals. Infection with Rickettsia parkeri strain NOD, Rickettsia cf. monacensis and 'Candidatus Rickettsia tarasevichiae' was detected in 3.4% of the ticks analyzed (n = 3). This study highlights the diversity of ticks in humans and wild and domestic mammals in Colombia. It also underscores the risk these ectoparasites represent to human and animal health due to the potential transmission of zoonotic pathogens such as Rickettsia spp.
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Affiliation(s)
- Johnathan Alvarez-Londoño
- Grupo de Investigación Genética, Biodiversidad y Manejo de Ecosistemas (GEBIOME), Departamento de Ciencias Biológicas, Facultad de Ciencias Exactas y Naturales, Universidad de Caldas, Calle 65 No 26-10 A.A 275, Manizales, Caldas, Colombia; Maestría en Ciencias Biológicas, Facultad de Ciencias Exactas y Naturales, Universidad de Caldas, Calle 65 No 26-10 A.A 275, Manizales, Caldas, Colombia
| | - Estefani T Martínez-Sánchez
- Grupo de Investigación Genética, Biodiversidad y Manejo de Ecosistemas (GEBIOME), Departamento de Ciencias Biológicas, Facultad de Ciencias Exactas y Naturales, Universidad de Caldas, Calle 65 No 26-10 A.A 275, Manizales, Caldas, Colombia; Doctorado en Ciencias-Biología, Facultad de Ciencias Exactas y Naturales, Universidad de Caldas, Calle 65 No 26-10 A.A 275, Manizales, Caldas, Colombia
| | - Héctor E Ramírez-Chaves
- Grupo de Investigación Genética, Biodiversidad y Manejo de Ecosistemas (GEBIOME), Departamento de Ciencias Biológicas, Facultad de Ciencias Exactas y Naturales, Universidad de Caldas, Calle 65 No 26-10 A.A 275, Manizales, Caldas, Colombia; Centro de Museos, Museo de Historia Natural, Universidad de Caldas, Calle 58 No 21-50, 170004, Manizales, Caldas, Colombia
| | - Gabriel J Castaño-Villa
- Grupo de Investigación Genética, Biodiversidad y Manejo de Ecosistemas - GEBIOME, Departamento de Desarrollo Rural y Recursos Naturales, Facultad de Ciencias Agropecuarias, Universidad de Caldas, Carrera 35 No 62-160 A.A 275, Manizales, Caldas, Colombia
| | - Fredy A Rivera-Páez
- Grupo de Investigación Genética, Biodiversidad y Manejo de Ecosistemas (GEBIOME), Departamento de Ciencias Biológicas, Facultad de Ciencias Exactas y Naturales, Universidad de Caldas, Calle 65 No 26-10 A.A 275, Manizales, Caldas, Colombia.
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3
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Duan L, Zhang L, Hou X, Bao Z, Zeng Y, He L, Liu Z, Zhou H, Hao Q, Dong A. Surveillance of tick-borne bacteria infection in ticks and forestry populations in Inner Mongolia, China. Front Public Health 2024; 12:1302133. [PMID: 38487180 PMCID: PMC10938913 DOI: 10.3389/fpubh.2024.1302133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Accepted: 02/09/2024] [Indexed: 03/17/2024] Open
Abstract
Ticks are one of the most important vectors that can transmit pathogens to animals and human beings. This study investigated the dominant tick-borne bacteria carried by ticks and tick-borne infections in forestry populations in Arxan, Inner Mongolia, China. Ticks were collected by flagging from May 2020 to May 2021, and blood samples were collected from individuals at high risk of acquiring tick-borne diseases from March 2022 to August 2023. The pooled DNA samples of ticks were analyzed to reveal the presence of tick-borne bacteria using high-throughput sequencing of the 16S rDNA V3-V4 region, and species-specific polymerase chain reaction (PCR) related to sequencing was performed to confirm the presence of pathogenic bacteria in individual ticks and human blood samples. All sera samples were examined for anti-SFGR using ELISA and anti-B. burgdorferi using IFA and WB. A total of 295 ticks (282 Ixodes persulcatus and 13 Dermacentor silvarum) and 245 human blood samples were collected. Rickettsia, Anaplasma, Borrelia miyamotoi, and Coxiella endosymbiont were identified in I. persulcatus by high-throughput sequencing, while Candidatus R. tarasevichiae (89.00%, 89/100), B. garinii (17.00%, 17/100), B. afzelii (7.00%, 7/100), and B. miyamotoi (7.00%, 7/100) were detected in I. persulcatus, as well the dual co-infection with Candidatus R. tarasevichiae and B. garinii were detected in 13.00% (13/100) of I. persulcatus. Of the 245 individuals, B. garinii (4.90%, 12/245), R. slovaca (0.82%, 2/245), and C. burnetii (0.41%, 1/245) were detected by PCR, and the sequences of the target genes of B. garinii detected in humans were identical to those detected in I. persulcatus. The seroprevalence of anti-SFGR and anti-B. burgdorferi was 5.71% and 13.47%, respectively. This study demonstrated that Candidatus R. tarasevichiae and B. garinii were the dominant tick-borne bacteria in I. persulcatus from Arxan, and that dual co-infection with Candidatus R. tarasevichiae and B. garinii was frequent. This is the first time that B. miyamotoi has been identified in ticks from Arxan and R. solvaca has been detected in humans from Inner Mongolia. More importantly, this study demonstrated the transmission of B. garinii from ticks to humans in Arxan, suggesting that long-term monitoring of tick-borne pathogens in ticks and humans is important for the prevention and control of tick-borne diseases.
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Affiliation(s)
- Like Duan
- National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, Beijing, China
| | - Lin Zhang
- National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, Beijing, China
| | - Xuexia Hou
- National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, Beijing, China
| | - Zihao Bao
- National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, Beijing, China
| | - Yu Zeng
- National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, Beijing, China
| | - Lijuan He
- National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, Beijing, China
| | - Zeliang Liu
- Affiliated Hospital of North China University of Science and Technology, Tangshan, China
| | - Haijian Zhou
- National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, Beijing, China
| | - Qin Hao
- National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, Beijing, China
| | - Aiying Dong
- Affiliated Hospital of North China University of Science and Technology, Tangshan, China
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4
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Su S, Cui MY, Gui Z, Guo QQ, Ren H, Ma SF, Mu L, Yu JF, Fu SY, Qi DD. First detection of Candidatus Rickettsia tarasevichiae in Hyalomma marginatum ticks. PLoS One 2024; 19:e0296757. [PMID: 38306367 PMCID: PMC10836667 DOI: 10.1371/journal.pone.0296757] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Accepted: 12/19/2023] [Indexed: 02/04/2024] Open
Abstract
Ticks are important vectors of zoonotic diseases and play a major role in the circulation and transmission of many rickettsial species. The aim of this study was to investigate the carriage of Candidatus Rickettsia tarasevichiae (CRT) in a total of 1168 ticks collected in Inner Mongolia to elucidate the potential public health risk of this pathogen, provide a basis for infectious disease prevention, control and prediction and contribute diagnostic ideas for clinical diseases that present with fever in populations exposed to ticks. A total of four tick species, Haemaphysalis concinna (n = 21), Dermacentor nuttalli (n = 122), Hyalomma marginatum (n = 148), and Ixodes persulcatus (n = 877), were collected at nine sampling sites in Inner Mongolia, China, and identified by morphological and molecular biological methods. Reverse transcription PCR targeting the 16S ribosomal RNA (rrs), gltA, groEL, ompB and Sca4 genes was used to detect CRT DNA. Sequencing was used for pathogen species confirmation. The molecular epidemiological analysis showed that three species of ticks were infected with CRT, and the overall positive rate was as high as 42%. The positive rate of I. persulcatus collected in Hinggan League city was up to 96%, and that of I. persulcatus collected in Hulun Buir city was 50%. The pool positive rates of D. nuttalli and H. marginatum collected in Bayan Nur city and H. concinna collected in Hulun Buir city were 0%, 28% and 40%, respectively. This study revealed the high prevalence of CRT infection in ticks from Inner Mongolia and the first confirmation of CRT detected in H. marginatum in China. The wide host range and high infection rate in Inner Mongolia may dramatically increase the exposure of CRT to humans and other vertebrates. The role of H. marginatum in the transmission of rickettsiosis and its potential risk to public health should be further considered.
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Affiliation(s)
- Si Su
- Graduate School, Inner Mongolia Medical University, Hohhot, Inner Mongolia, China
| | - Meng-Yu Cui
- Graduate School, Inner Mongolia Medical University, Hohhot, Inner Mongolia, China
| | - Zheng Gui
- First Hospital of Jilin University, Changchun, China
| | - Qi-Qi Guo
- Graduate School, Inner Mongolia Medical University, Hohhot, Inner Mongolia, China
| | - Hong Ren
- First Clinical College, Inner Mongolia Medical University, Hohhot, Inner Mongolia, China
| | - Shi-Fa Ma
- Laboratory of Basic and Clinical Psychiatry, The Third People’s Hospital of Hulunbuir City, Hulunbuir, Inner Mongolia, China
| | - Lan Mu
- School of Basic Medicine, Inner Mongolia Medical University, Hohhot Inner Mongolia, China
| | - Jing-Feng Yu
- School of Basic Medicine, Inner Mongolia Medical University, Hohhot Inner Mongolia, China
| | - Shao-Yin Fu
- Inner Mongolia Academy of Agricultural & Animal Husbandry Science, Hohhot, Inner Mongolia, China
| | - Dong-Dong Qi
- Laboratory of Basic and Clinical Psychiatry, The Third People’s Hospital of Hulunbuir City, Hulunbuir, Inner Mongolia, China
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Tian J, Liu J, Zhao H, Chen X, Geng X, Lu M, Li K. Molecular surveillance reveals a potential hotspot of tick-borne disease in Yakeshi City, Inner Mongolia. BMC Microbiol 2023; 23:359. [PMID: 37986042 PMCID: PMC10662550 DOI: 10.1186/s12866-023-03110-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Accepted: 11/06/2023] [Indexed: 11/22/2023] Open
Abstract
A molecular surveillance of tick-borne diseases was performed in Hulunbuir City, Inner Mongolia. A total of 149 ticks including three species (Ixodes persulcatus, Haemaphysalis concinna, and Dermacentor silvarum) were collected. As many as 11 tick-borne bacterial pathogens were identified in them. Some of them have high positive rates. For example, Candidatus Rickettsia tarasevichiae was detected with a high prevalence of 72.48%, while Candidatus Lariskella sp. was detected in 31.54% of ticks. For both Rickettsia raoultii and Anaplasma phagocytophilum, two distinct genotypes were identified based on their phylogenetic trees based on 16S rRNA, gltA, and groEL sequences. Remarkable genetic diversity was also observed for 16S and flaB genes of Borreliella garinii, an agent of Lyme disease. Rickettsia heilongjiangensis causing Far-Eastern spotted fever (2.68%, 4/149), Ehrlichia muris causing human ehrlichiosis (4.70%, 7/149), Borrelia miyamotoi causing relapsing fever (2.01%, 3/149), and Borreliella afzelii causing Lyme disease (2.01%, 3/149) were also detected. Additionally, a previously uncharacterized Anaplasma species closely related to Anaplasma ovis was identified. Herein we name it "Candidatus Anaplasma mongolica". Based on these results, we propose that Yakeshi City might be a potential hotspot of tick-borne diseases.
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Affiliation(s)
- Junhua Tian
- Wuhan Center for Disease Control and Prevention, Wuhan City, Hubei Province, 430024, China
| | - Jing Liu
- Wuhan Center for Disease Control and Prevention, Wuhan City, Hubei Province, 430024, China
| | - Hongqing Zhao
- National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping District, Beijing City, 102206, China
| | - Xiaomin Chen
- Wuhan Center for Disease Control and Prevention, Wuhan City, Hubei Province, 430024, China
| | - Xueqin Geng
- Caidian Center for Disease Control and Prevention, Wuhan City, Hubei Province, 430100, China
| | - Miao Lu
- National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping District, Beijing City, 102206, China.
- National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping Liuzi 5, Beijing, 102206, China.
| | - Kun Li
- National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping District, Beijing City, 102206, China.
- National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping Liuzi 5, Beijing, 102206, China.
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Perfilyeva YV, Berdygulova ZA, Mashzhan AS, Zhigailov AV, Ostapchuk YO, Naizabayeva DA, Cherusheva AS, Bissenbay AO, Kuatbekova SA, Abdolla N, Nizkorodova AS, Kulemin MV, Shapiyeva ZZ, Sayakova ZZ, Perfilyeva AV, Akhmetollayev IA, Maltseva ER, Skiba YA, Mamadaliyev SM, Dmitrovskiy AM. Molecular and seroepidemiological investigation of Сoxiella burnetii and spotted fever group rickettsiae in the southern region of Kazakhstan. Ticks Tick Borne Dis 2023; 14:102240. [PMID: 37647811 DOI: 10.1016/j.ttbdis.2023.102240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2023] [Revised: 07/25/2023] [Accepted: 08/01/2023] [Indexed: 09/01/2023]
Abstract
Ticks are involved in the circulation of a number of human pathogens, including spotted fever group (SFG) Rickettsia spp. and Coxiella burnetii. Little is known about the occurrence of these microorganisms in the southern region of Kazakhstan. In 2018-2022, a total of 726 ticks were collected from bitten humans, livestock, and vegetation in four oblasts of the southern region of Kazakhstan and subjected to DNA extraction. The overall infection rate of Coxiella spp. and Rickettsia spp. in the ticks was 3.3% (24/726) and 69.9% (300/429), respectively. Phylogenetic analysis of ompA and gltA genes revealed the presence of three pathogenic SFG rickettsiae: Candidatus R. tarasevichiae, R. aeschlimannii and R. raoultii in ticks collected from bitten humans. In addition, Candidatus R. barbariae was detected in six Rhipicephalus turanicus ticks for the first time in Kazakhstan. To determine the seroprevalence of C. burnetii infection, we performed a serological analysis of samples collected from 656 domestic ruminants (cattle, sheep, and goats) in the region. Overall, 23.5% (154/656) of the animals tested were positive for IgG against C. burnetii. Seroprevalence at the herd level was 54% (28/52). Goats (43%; 12/28; odds ratio (OD) = 28.9, p < 0.05) and sheep (31.9%; 137/430; OD = 18.1, p < 0.05) had higher seroprevalence than cattle (2.5%; 5/198). Among the risk factors considered in this study, age (p = 0.003) and the oblast in which the animals were sampled (p = 0.049) were statistically associated with seropostivity for Q fever in sheep, according to the results of multivariate logistic regression analysis. Seroprevalence ranged from 0% to 55.5% in animals in different districts of the southern region of Kazakhstan. Active C. burnetii bacteremia was detected in four of 154 (2.6%) seropositive animals. The data obtained provide strong evidence of the presence of pathogenic rickettsiae and C. burnetii in the southern region of Kazakhstan and emphasize the need to improve epidemiological surveillance in the region.
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Affiliation(s)
- Yuliya V Perfilyeva
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; M.A. Aitkhozhin Institute of Molecular Biology and Biochemistry, 86 Dosmukhamedov St., Almaty 050012, Kazakhstan
| | - Zhanna A Berdygulova
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; Al-Farabi Kazakh National University, 71 Al-Farabi Avenue, Almaty 050040, Kazakhstan.
| | - Akzhigit S Mashzhan
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; Al-Farabi Kazakh National University, 71 Al-Farabi Avenue, Almaty 050040, Kazakhstan.
| | - Andrey V Zhigailov
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; M.A. Aitkhozhin Institute of Molecular Biology and Biochemistry, 86 Dosmukhamedov St., Almaty 050012, Kazakhstan
| | - Yekaterina O Ostapchuk
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; M.A. Aitkhozhin Institute of Molecular Biology and Biochemistry, 86 Dosmukhamedov St., Almaty 050012, Kazakhstan
| | - Dinara A Naizabayeva
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; Al-Farabi Kazakh National University, 71 Al-Farabi Avenue, Almaty 050040, Kazakhstan
| | - Alena S Cherusheva
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan
| | - Akerke O Bissenbay
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; Al-Farabi Kazakh National University, 71 Al-Farabi Avenue, Almaty 050040, Kazakhstan
| | - Saltanat A Kuatbekova
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan
| | - Nurshat Abdolla
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; M.A. Aitkhozhin Institute of Molecular Biology and Biochemistry, 86 Dosmukhamedov St., Almaty 050012, Kazakhstan
| | - Anna S Nizkorodova
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; M.A. Aitkhozhin Institute of Molecular Biology and Biochemistry, 86 Dosmukhamedov St., Almaty 050012, Kazakhstan
| | - Maxim V Kulemin
- Anti-Plague Station, 114 Dulati St., Shymkent 160013, Kazakhstan
| | - Zhanna Zh Shapiyeva
- Scientific Practical Center of Sanitary-Epidemiological Expertise and Monitoring, 84 Auezov St., Almaty 050008, Kazakhstan
| | - Zaure Z Sayakova
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; M. Aikimbayev National Scientific Center for Especially Dangerous Infections, 14 Zhahanger St., Almaty 050054, Kazakhstan
| | | | | | - Elina R Maltseva
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; M.A. Aitkhozhin Institute of Molecular Biology and Biochemistry, 86 Dosmukhamedov St., Almaty 050012, Kazakhstan; Tethys Scientific Society, 9 Microdisctrict 1/72, Almaty 050036, Kazakhstan
| | - Yuriy A Skiba
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; M.A. Aitkhozhin Institute of Molecular Biology and Biochemistry, 86 Dosmukhamedov St., Almaty 050012, Kazakhstan; Tethys Scientific Society, 9 Microdisctrict 1/72, Almaty 050036, Kazakhstan
| | - Seidigapbar M Mamadaliyev
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan
| | - Andrey M Dmitrovskiy
- Almaty Branch of the National Center for Biotechnology, Central Reference Laboratory, 14 Zhahanger St., Almaty 050054, Kazakhstan; M. Aikimbayev National Scientific Center for Especially Dangerous Infections, 14 Zhahanger St., Almaty 050054, Kazakhstan
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Igolkina Y, Yakimenko V, Tikunov A, Epikhina T, Tancev A, Tikunova N, Rar V. Novel Genetic Lineages of Rickettsia helvetica Associated with Ixodes apronophorus and Ixodes trianguliceps Ticks. Microorganisms 2023; 11:1215. [PMID: 37317189 DOI: 10.3390/microorganisms11051215] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2023] [Revised: 04/27/2023] [Accepted: 05/04/2023] [Indexed: 06/16/2023] Open
Abstract
Ixodes apronophorus is an insufficiently studied nidicolous tick species. For the first time, the prevalence and genetic diversity of Rickettsia spp. in Ixodes apronophorus, Ixodes persulcatus, and Ixodes trianguliceps ticks from their sympatric habitats in Western Siberia were investigated. Rickettsia helvetica was first identified in I. apronophorus with a prevalence exceeding 60%. "Candidatus Rickettsia tarasevichiae" dominated in I. persulcatus, whereas I. trianguliceps were infected with "Candidatus Rickettsia uralica", R. helvetica, and "Ca. R. tarasevichiae". For larvae collected from small mammals, a strong association was observed between tick species and rickettsiae species/sequence variants, indicating that co-feeding transmission in studied habitats is absent or its impact is insignificant. Phylogenetic analysis of all available R. helvetica sequences demonstrated the presence of four distinct genetic lineages. Most sequences from I. apronophorus belong to the unique lineage III, and single sequences cluster into the lineage I alongside sequences from European I. ricinus and Siberian I. persulcatus. Rickettsia helvetica sequences from I. trianguliceps, along with sequences from I. persulcatus from northwestern Russia, form lineage II. Other known R. helvetica sequences from I. persulcatus from the Far East group into the lineage IV. The obtained results demonstrated the high genetic variability of R. helvetica.
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Affiliation(s)
- Yana Igolkina
- Institute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Avenue 8, 630090 Novosibirsk, Russia
| | - Valeriy Yakimenko
- Omsk Research Institute of Natural Foci Infections, Mira Avenue 7, 644080 Omsk, Russia
| | - Artem Tikunov
- Institute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Avenue 8, 630090 Novosibirsk, Russia
| | - Tamara Epikhina
- Institute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Avenue 8, 630090 Novosibirsk, Russia
| | - Aleksey Tancev
- Omsk Research Institute of Natural Foci Infections, Mira Avenue 7, 644080 Omsk, Russia
| | - Nina Tikunova
- Institute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Avenue 8, 630090 Novosibirsk, Russia
| | - Vera Rar
- Institute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Avenue 8, 630090 Novosibirsk, Russia
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8
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Liu D, Wulantuya, Fan H, Li X, Li F, Gao T, Yin X, Zhang Z, Cao M, Kawabata H, Sato K, Ohashi N, Ando S, Gaowa. Co-infection of tick-borne bacterial pathogens in ticks in Inner Mongolia, China. PLoS Negl Trop Dis 2023; 17:e0011121. [PMID: 36893172 PMCID: PMC10030021 DOI: 10.1371/journal.pntd.0011121] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Revised: 03/21/2023] [Accepted: 01/27/2023] [Indexed: 03/10/2023] Open
Abstract
Tick-borne infectious diseases pose a serious health threat in certain regions of the world. Emerging infectious diseases caused by novel tick-borne pathogens have been reported that are causing particular concern. Several tick-borne diseases often coexist in the same foci, and a single vector tick can transmit two or more pathogens at the same time, which greatly increases the probability of co-infection in host animals and humans and can lead to an epidemic of tick-borne disease. The lack of epidemiological data and information on the specific clinical symptoms related to co-infection with tick-borne pathogens means that it is not currently possible to accurately and rapidly distinguish between a single pathogen infection and co-infection with multiple pathogens, which can have serious consequences. Inner Mongolia in the north of China is endemic for tick-borne infectious diseases, especially in the eastern forest region. Previous studies have found that more than 10% of co-infections were in host-seeking ticks. However, the lack of data on the specific types of co-infection with pathogens makes clinical treatment difficult. In our study, we present data on the co-infection types and the differences in co-infection among different ecological regions through genetic analysis of tick samples collected throughout Inner Mongolia. Our findings may aid clinicians in the diagnosis of concomitant tick-borne infectious diseases.
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Affiliation(s)
- Dan Liu
- Inner Mongolia Key Laboratory of Tick-borne Zoonotic Infectious Disease, Department of Medicine, College of Hetao, Bayan Nur city, Inner Mongolia Autonomous Region, China
| | - Wulantuya
- Inner Mongolia Key Laboratory of Tick-borne Zoonotic Infectious Disease, Department of Medicine, College of Hetao, Bayan Nur city, Inner Mongolia Autonomous Region, China
| | - Hongxia Fan
- Inner Mongolia Key Laboratory of Tick-borne Zoonotic Infectious Disease, Department of Medicine, College of Hetao, Bayan Nur city, Inner Mongolia Autonomous Region, China
| | - Xiaona Li
- Inner Mongolia Key Laboratory of Tick-borne Zoonotic Infectious Disease, Department of Medicine, College of Hetao, Bayan Nur city, Inner Mongolia Autonomous Region, China
| | - Fangchao Li
- Inner Mongolia Key Laboratory of Tick-borne Zoonotic Infectious Disease, Department of Medicine, College of Hetao, Bayan Nur city, Inner Mongolia Autonomous Region, China
| | - Ting Gao
- Inner Mongolia Key Laboratory of Tick-borne Zoonotic Infectious Disease, Department of Medicine, College of Hetao, Bayan Nur city, Inner Mongolia Autonomous Region, China
| | - Xuhong Yin
- Inner Mongolia Key Laboratory of Tick-borne Zoonotic Infectious Disease, Department of Medicine, College of Hetao, Bayan Nur city, Inner Mongolia Autonomous Region, China
| | - Zitong Zhang
- Inner Mongolia Key Laboratory of Tick-borne Zoonotic Infectious Disease, Department of Medicine, College of Hetao, Bayan Nur city, Inner Mongolia Autonomous Region, China
| | - Minzhi Cao
- Inner Mongolia Key Laboratory of Tick-borne Zoonotic Infectious Disease, Department of Medicine, College of Hetao, Bayan Nur city, Inner Mongolia Autonomous Region, China
| | - Hiroki Kawabata
- Department of Bacteriology-I, National Institute of Infectious Diseases, Shinjuku-ku, Tokyo, Japan
| | - Kozue Sato
- Department of Bacteriology-I, National Institute of Infectious Diseases, Shinjuku-ku, Tokyo, Japan
| | - Norio Ohashi
- Laboratory of Microbiology, Department of Food and Nutritional Sciences, University of Shizuoka, Shizuoka, Japan
| | - Shuji Ando
- Department of Virology-I, National Institute of Infectious Diseases, Tokyo, Japan
| | - Gaowa
- Inner Mongolia Key Laboratory of Tick-borne Zoonotic Infectious Disease, Department of Medicine, College of Hetao, Bayan Nur city, Inner Mongolia Autonomous Region, China
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9
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Bugmyrin SV, Romanova LY, Belova OA, Kholodilov IS, Bespyatova LA, Chernokhaeva LL, Gmyl LV, Klimentov AS, Ivannikova AY, Polienko AE, Yakovlev AS, Ieshko EP, Gmyl AP, Karganova GG. Pathogens in Ixodes persulcatus and Ixodes ricinus ticks (Acari, Ixodidae) in Karelia (Russia). Ticks Tick Borne Dis 2022; 13:102045. [PMID: 36183587 DOI: 10.1016/j.ttbdis.2022.102045] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Revised: 08/23/2022] [Accepted: 09/14/2022] [Indexed: 11/23/2022]
Abstract
Ixodid ticks (Acarina, Ixodidae) are vectors of dangerous human infections. The main tick species that determine the epidemiological situation for tick-borne diseases in northern Europe are Ixodes ricinus and Ixodes persulcatus. In recent years, significant changes in the number and distribution of these species have been observed, accompanied by an expansion of the sympatric range. This work summarizes the data of long-term studies carried out in Karelia since 2007 on the infection of I. persulcatus and I. ricinus ticks with various pathogens, including new viruses with unclear pathogenic potential. As a result, tick-borne encephalitis virus (TBEV, Siberian genotype), Alongshan virus, several representatives of the family Phenuiviridae, Borrelia afzelii, Borrelia garinii, Ehrlichia muris, Candidatus Rickettsia tarasevichiae and Candidatus Lariskella arthropodarum were identified. Data were obtained on the geographical and temporal variability of tick infection rates with these main pathogens. The average infection rates of I. persulcatus with TBEV and Borrelia burgdorferi sensu lato were 4.4% and 23.4% and those of I. ricinus were 1.1% and 11.9%, respectively. We did not find a correlation between the infection rate of ticks with TBEV, B. burgdorferi s.l. and Ehrlichia muris/chaffeensis with the sex of the vector. In general, the peculiarities of the epidemiological situation in Karelia are determined by the wide distribution and high abundance of I. persulcatus ticks and by their relatively high infection rate with TBEV and B. burgdorferi s.l. in most of the territory, including the periphery of the range.
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Affiliation(s)
- S V Bugmyrin
- Institute of Biology, Karelian Research Centre, Russian Academy of Sciences, 11 Pushkinskaya St., Petrozavodsk 185910, Russia
| | - L Yu Romanova
- FSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), prem. 8, k.17, pos. Institut Poliomyelita, poselenie Moskovskiy, Moscow 108811, Russia; Institute for Translational Medicine and Biotechnology, Sechenov University, Moscow 119146, Russia
| | - O A Belova
- FSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), prem. 8, k.17, pos. Institut Poliomyelita, poselenie Moskovskiy, Moscow 108811, Russia
| | - I S Kholodilov
- FSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), prem. 8, k.17, pos. Institut Poliomyelita, poselenie Moskovskiy, Moscow 108811, Russia
| | - L A Bespyatova
- Institute of Biology, Karelian Research Centre, Russian Academy of Sciences, 11 Pushkinskaya St., Petrozavodsk 185910, Russia
| | - L L Chernokhaeva
- FSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), prem. 8, k.17, pos. Institut Poliomyelita, poselenie Moskovskiy, Moscow 108811, Russia
| | - L V Gmyl
- FSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), prem. 8, k.17, pos. Institut Poliomyelita, poselenie Moskovskiy, Moscow 108811, Russia
| | - A S Klimentov
- FSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), prem. 8, k.17, pos. Institut Poliomyelita, poselenie Moskovskiy, Moscow 108811, Russia
| | - A Y Ivannikova
- FSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), prem. 8, k.17, pos. Institut Poliomyelita, poselenie Moskovskiy, Moscow 108811, Russia
| | - A E Polienko
- FSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), prem. 8, k.17, pos. Institut Poliomyelita, poselenie Moskovskiy, Moscow 108811, Russia
| | - A S Yakovlev
- FSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), prem. 8, k.17, pos. Institut Poliomyelita, poselenie Moskovskiy, Moscow 108811, Russia
| | - E P Ieshko
- Institute of Biology, Karelian Research Centre, Russian Academy of Sciences, 11 Pushkinskaya St., Petrozavodsk 185910, Russia
| | - A P Gmyl
- FSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), prem. 8, k.17, pos. Institut Poliomyelita, poselenie Moskovskiy, Moscow 108811, Russia
| | - G G Karganova
- FSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), prem. 8, k.17, pos. Institut Poliomyelita, poselenie Moskovskiy, Moscow 108811, Russia; Institute for Translational Medicine and Biotechnology, Sechenov University, Moscow 119146, Russia; Lomonosov Moscow State University, Department of Biology, Moscow 119991, Russia.
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10
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Molecular detection of “Candidatus Rickettsia tarasevichiae” by Loop-mediated Isothermal Amplification (LAMP) of the ompA gene. METHODS IN MICROBIOLOGY 2022; 202:106601. [DOI: 10.1016/j.mimet.2022.106601] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Revised: 10/08/2022] [Accepted: 10/10/2022] [Indexed: 11/21/2022]
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11
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Shao JW, Yao XY, Song XD, Li WJ, Huang HL, Huang SJ, Zhang XL. Molecular detection and genetic diversity of Rickettsia spp. in pet dogs and their infesting ticks in Harbin, northeastern China. BMC Vet Res 2021; 17:113. [PMID: 33678176 PMCID: PMC7938463 DOI: 10.1186/s12917-021-02823-y] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2020] [Accepted: 02/26/2021] [Indexed: 11/19/2022] Open
Abstract
Background Pet dogs are important companion animals that share the environment within households, and play an important role in local community life. In addition, pet dogs also are reservoirs of zoonotic agents, including Rickettsia spp., thus increasing the risk of rickettsial infections in humans. It’s meaningful to investigate the epidemiology of rickettsial agents in pet dogs, and make contribute to the surveillance of rickettsioses in human in China. Results In this study, a total of 496 pet dogs’ blood samples and 343 ticks infested in pet dogs were collected, and the presence and prevalence of Rickettsia were determined by amplifying the partial gltA and 17-kDa genes, with an overall positive rate of 8.1 % in blood samples and 14.0 % in tick samples. In addition, the rrs, gltA, groEL, and ompA genes of rickettsial were also recovered to determine the species of Rickettsia detected furtherly. Sequencing blast and phylogenetic analyses revealed the presence of three human pathogenic Rickettsia species (Rickettsia raoultii, Candidatus Rickettsia tarasevichiae and Rickettsia felis) in samples associated with pet dogs. Moreover, all the sequences of Rickettsia that we obtained presented close relationship with others available in GenBank, and Rickettsia raoultii was the most predominant Rickettsia species infected in pet dogs’ blood samples or in tick samples. Conclusions This study provides the molecular epidemiology data about the Rickettsia spp. infection associated with pet dogs in urban areas of Harbin city. Three rickettisae species pathogenic to humans were identified from pet dogs’ blood and the infested ticks in urban areas of Harbin city. Considering the intimate relationship between human and pets, these results indicate the potential transmission risk of human rickettisal infections from pet dogs through ectoparasites, and also highlighting that more attention should be paid to rickettsial infection in pet dogs and the infested ticks from the “One health” perspective.
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Affiliation(s)
- Jian-Wei Shao
- Key Laboratory for Preventive Research of Emerging Animal Diseases, Foshan University, 528231, Foshan, Guangdong, China.,College of Life Science and Engineering, Foshan University, 528231, Foshan, Guangdong, China
| | - Xin-Yan Yao
- College of Life Science and Engineering, Foshan University, 528231, Foshan, Guangdong, China
| | - Xu-Dong Song
- Dr.Song's Clinic, 150086, Harbin, Heilongjiang, China
| | - Wen-Jun Li
- College of Life Science and Engineering, Foshan University, 528231, Foshan, Guangdong, China
| | - Hui-Lan Huang
- College of Life Science and Engineering, Foshan University, 528231, Foshan, Guangdong, China
| | - Shu-Jian Huang
- Key Laboratory for Preventive Research of Emerging Animal Diseases, Foshan University, 528231, Foshan, Guangdong, China.,College of Life Science and Engineering, Foshan University, 528231, Foshan, Guangdong, China
| | - Xue-Lian Zhang
- Key Laboratory for Preventive Research of Emerging Animal Diseases, Foshan University, 528231, Foshan, Guangdong, China. .,College of Life Science and Engineering, Foshan University, 528231, Foshan, Guangdong, China.
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12
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Vikentjeva M, Geller J, Remm J, Golovljova I. Rickettsia spp. in rodent-attached ticks in Estonia and first evidence of spotted fever group Rickettsia species Candidatus Rickettsia uralica in Europe. Parasit Vectors 2021; 14:65. [PMID: 33472659 PMCID: PMC7818765 DOI: 10.1186/s13071-020-04564-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Accepted: 12/28/2020] [Indexed: 01/04/2023] Open
Abstract
BACKGROUND Rickettsia spp. are human pathogens that cause a number of diseases and are transmitted by arthropods, such as ixodid ticks. Estonia is one of few regions where the distribution area of two medically important tick species, Ixodes persulcatus and I. ricinus, overlaps. The nidicolous rodent-associated Ixodes trianguliceps has also recently been shown to be present in Estonia. Although no data are available on human disease(s) caused by tick-borne Rickettsia spp. in Estonia, the presence of three Rickettsia species in non-nidicolous ticks has been previously reported. The aim of this study was to detect, identify and partially characterize Rickettsia species in nidicolous and non-nidicolous ticks attached to rodents in Estonia. RESULTS Larvae and nymphs of I. ricinus (n = 1004), I. persulcatus (n = 75) and I. trianguliceps (n = 117), all removed from rodents and shrews caught in different parts of Estonia, were studied for the presence of Rickettsia spp. by nested PCR. Ticks were collected from 314 small animals of five species [Myodes glareolus (bank voles), Apodemus flavicollis (yellow necked mice), A. agrarius (striped field mice), Microtus subterranius (pine voles) and Sorex araneus (common shrews)]. Rickettsial DNA was detected in 8.7% (103/1186) of the studied ticks. In addition to identifying R. helvetica, which had been previously found in questing ticks, we report here the first time that the recently described I. trianguliceps-associated Candidatus Rickettsia uralica has been identified west of the Ural Mountains.
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Affiliation(s)
- Maria Vikentjeva
- Department of Virology and Immunology, National Institute for Health Development, Tallinn, Estonia. .,Department of Gene Technology, Tallinn University of Technology, Tallinn, Estonia.
| | - Julia Geller
- Department of Virology and Immunology, National Institute for Health Development, Tallinn, Estonia
| | - Jaanus Remm
- Department of Zoology, University of Tartu, Tartu, Estonia
| | - Irina Golovljova
- Department of Virology and Immunology, National Institute for Health Development, Tallinn, Estonia.,Tallinn Children's Hospital, Tallinn, Estonia
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13
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Oren A, Garrity GM, Parker CT, Chuvochina M, Trujillo ME. Lists of names of prokaryotic Candidatus taxa. Int J Syst Evol Microbiol 2020; 70:3956-4042. [DOI: 10.1099/ijsem.0.003789] [Citation(s) in RCA: 782] [Impact Index Per Article: 156.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023] Open
Abstract
We here present annotated lists of names of Candidatus taxa of prokaryotes with ranks between subspecies and class, proposed between the mid-1990s, when the provisional status of Candidatus taxa was first established, and the end of 2018. Where necessary, corrected names are proposed that comply with the current provisions of the International Code of Nomenclature of Prokaryotes and its Orthography appendix. These lists, as well as updated lists of newly published names of Candidatus taxa with additions and corrections to the current lists to be published periodically in the International Journal of Systematic and Evolutionary Microbiology, may serve as the basis for the valid publication of the Candidatus names if and when the current proposals to expand the type material for naming of prokaryotes to also include gene sequences of yet-uncultivated taxa is accepted by the International Committee on Systematics of Prokaryotes.
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Affiliation(s)
- Aharon Oren
- The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel
| | - George M. Garrity
- NamesforLife, LLC, PO Box 769, Okemos MI 48805-0769, USA
- Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA
| | | | - Maria Chuvochina
- Australian Centre for Ecogenomics, University of Queensland, St. Lucia QLD 4072, Brisbane, Australia
| | - Martha E. Trujillo
- Departamento de Microbiología y Genética, Campus Miguel de Unamuno, Universidad de Salamanca, 37007, Salamanca, Spain
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14
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Distribution and molecular characterization of rickettsiae in ticks in Harbin area of Northeastern China. PLoS Negl Trop Dis 2020; 14:e0008342. [PMID: 32497120 PMCID: PMC7272007 DOI: 10.1371/journal.pntd.0008342] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2019] [Accepted: 05/01/2020] [Indexed: 12/02/2022] Open
Abstract
Tick-borne rickettsioses are world-spreading infectious zoonoses. Ticks serve as reservoirs and vectors for Rickettsia and play a key role in transmission of rickettsioses. Most of the Chinese rickettsiosis patients are reported from Northeastern China but the distribution of tick and tick-borne Rickettsia species in Northeastern China remain poorly studied. In this study, a total of 1,286 ticks were captured from the seven counties of Harbin, an area in Northeastern China, and the tick-borne Rickettsia species were identified by PCR and sequencing of rrs, gltA, groEL, ompA and 17-kDa antigen-encoding genes. Of the 5 identified tick species, Haemaphysalis longicornis and Ixodes persulcatus were the predominant tick species in the livestock and vegetation, respectively. Rickettsia raoultii and “Candidatus Rickettsia tarasevichiae” were the two detectable Rickettsia species in the ticks with a 28.8% positive rate but no rickettsiae were found in ticks of Haemaphysalis concinna. R. raoultii detected in 37.6% of the Dermacentor nuttalli, Dermacentor silvarum and H. longicornis ticks while “Ca. R. tarasevichiae” was only present in 22.8% of the I. persulcatus ticks. In particular, the positive rate of both R. raoultii and “Ca. R. tarasevichiae” in ticks from the livestock (40.7%) was significantly higher than that from the vegetation (19.5%). The results indicate that the tick and tick-borne Rickettsia species are diverse in different regions of Harbin due to geographic difference and the ticks from livestock may play a more important role in transmission of rickettsioses to human. Rickettsiosis is a tick-borne infectious disease of global importance. The disease has been prevailing in Northeastern China but the distribution of tick and tick-borne Rickettsia species from different areas of Northeastern China remain poorly studied. We collected a total of 1,286 ticks in the seven counties with different geographic environments of Harbin, an area of Northeastern China, and all the ticks were classified as Dermacentor nuttalli, Dermacentor silvarum, Haemaphysalis concinna, Haemaphysalis longicornis or Ixodes persulcatus. A total of 28.8% of the ticks tested positive for either Rickettsia raoultii or “Candidatus Rickettsia tarasevichiae”, in which 37.6% of the D. nuttalli, D. silvarum and H. longicornis ticks were positive for R. raoultii while 22.8% of the I. persulcatus ticks were positive for “Ca. R. tarasevichiae”. The positive rate of both R. raoultii and “Ca. R. tarasevichiae” in ticks from the livestock (40.7%) was significantly higher than that from the vegetation (19.5%). All the data indicate that ticks in the Harbin area have a high infection rate with Rickettsia species and domestic animals may have a tick-livestock rickettsial circulation that may play an important role in transmission of rickettsioses.
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15
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Swei A, Couper LI, Coffey LL, Kapan D, Bennett S. Patterns, Drivers, and Challenges of Vector-Borne Disease Emergence. Vector Borne Zoonotic Dis 2020; 20:159-170. [PMID: 31800374 PMCID: PMC7640753 DOI: 10.1089/vbz.2018.2432] [Citation(s) in RCA: 80] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
Vector-borne diseases are emerging at an increasing rate and comprise a disproportionate share of all emerging infectious diseases. Yet, the key ecological and evolutionary dimensions of vector-borne disease that facilitate their emergence have not been thoroughly explored. This study reviews and synthesizes the existing literature to explore global patterns of emerging vector-borne zoonotic diseases (VBZDs) under changing global conditions. We find that the vast majority of emerging VBZDs are transmitted by ticks (Ixodidae) and mosquitoes (Culicidae) and the pathogens transmitted are dominated by Rickettsiaceae bacteria and RNA viruses (Flaviviridae, Bunyaviridae, and Togaviridae). The most common potential driver of these emerging zoonoses is land use change, but for many diseases, the driver is unknown, revealing a critical research gap. While most reported VBZDs are emerging in the northern latitudes, after correcting for sampling bias, Africa is clearly a region with the greatest share of emerging VBZD. We highlight critical gaps in our understanding of VBZD emergence and emphasize the importance of interdisciplinary research and consideration of deeper evolutionary processes to improve our capacity for anticipating where and how such diseases have and will continue to emerge.
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Affiliation(s)
- Andrea Swei
- Department of Biology, San Francisco State University, San Francisco, California
| | - Lisa I. Couper
- Department of Biology, Stanford University, Palo Alto, California
| | - Lark L. Coffey
- Department of Pathology, Microbiology, and Immunology, School of Veterinary Medicine, University of California, Davis, Davis, California
| | - Durrell Kapan
- Institute for Biodiversity Science and Sustainability, California Academy of Sciences, San Francisco, California
| | - Shannon Bennett
- Institute for Biodiversity Science and Sustainability, California Academy of Sciences, San Francisco, California
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16
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Yuan TT, Ma L, Jiang BG, Fu WM, Sun Y, Jia N, Jiang JF. First Confirmed Infection of Candidatus Rickettsia Tarasevichiae in Rodents Collected from Northeastern China. Vector Borne Zoonotic Dis 2019; 20:88-92. [PMID: 31453762 DOI: 10.1089/vbz.2019.2443] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Background: To date, there have been few investigations on Candidatus Rickettsia tarasevichiae in rodents carried out in China. In this study, we conducted surveillance for Candidatus R. tarasevichiae infection in rodents. A total of 463 rodents were captured at five survey sites in Mudanjiang, Heilongjiang province, where Candidatus R. tarasevichiae patients have been reported. PCR targeting citrate synthase and outer membrane protein genes was performed and positive amplicons were sequenced. Result: Candidatus R. tarasevichiae was detected in 1.29% of the 463 rodents sampled from the five survey sites in Mudanjiang, Heilongjiang province. Only 2 out of 13 (15.38%) Rattus norvegicus and 4 out of 80 (5%) Clethrionomys rufocanus collected from Dashigou forestry were positive for the gltA and ompA genes of Candidatus R. tarasevichiae DNA. The detected Candidatus R. tarasevichiae was in the same clade of sequences from patients in Mudanjiang based on phylogenetic analysis. Conclusion: Rodents are major host of ticks and also serve as reservoirs of spotted fever group (SFG) Rickettsia. Although this is the first confirmation of Candidatus R. tarasevichiae detected in rodents in China, further investigations are needed to clarify the distribution of Candidatus R. tarasevichiae in rodents elsewhere and what role they play as reservoirs.
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Affiliation(s)
- Ting-Ting Yuan
- Department of Epidemiology of Infectious Diseases, Graduate School of Anhui Medical University, Hefei City, China.,State Key Laboratory of Pathogens and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China
| | - Lan Ma
- State Key Laboratory of Pathogens and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China
| | - Bao-Gui Jiang
- State Key Laboratory of Pathogens and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China
| | - Wei-Ming Fu
- Center for Health Inspection, Heilongjiang Bureau of Entry & Exit Inspection and Quarantine, Harbin, China
| | - Yi Sun
- State Key Laboratory of Pathogens and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China
| | - Na Jia
- State Key Laboratory of Pathogens and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China
| | - Jia-Fu Jiang
- Department of Epidemiology of Infectious Diseases, Graduate School of Anhui Medical University, Hefei City, China.,State Key Laboratory of Pathogens and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China
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17
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Xu J. Reverse microbial etiology: A research field for predicting and preventing emerging infectious diseases caused by an unknown microorganism. JOURNAL OF BIOSAFETY AND BIOSECURITY 2019; 1:19-21. [PMID: 32501431 PMCID: PMC7148598 DOI: 10.1016/j.jobb.2018.12.005] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2018] [Accepted: 12/11/2018] [Indexed: 02/05/2023] Open
Abstract
To predict, detect, prepare for, and prevent potential emerging infectious diseases caused by unknown microorganisms in the future, we have proposed the research field of reverse microbial etiology. We isolate and classify unknown microorganisms and assesse their ability to cause infection, an outbreak, or epidemic. We suggest a list of potential pathogens and propose a preparation, prevention, and control strategy to protect global health and global economy and to ensure global security.
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Affiliation(s)
- Jianguo Xu
- State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping, Beijing 102206, PR China
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18
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Eremeeva M. In memoriam: Irina V. Tarasevich. New Microbes New Infect 2018. [DOI: 10.1016/j.nmni.2018.09.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Tick-borne pathogens in Finland: comparison of Ixodes ricinus and I. persulcatus in sympatric and parapatric areas. Parasit Vectors 2018; 11:556. [PMID: 30355331 PMCID: PMC6201636 DOI: 10.1186/s13071-018-3131-y] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2018] [Accepted: 10/02/2018] [Indexed: 12/23/2022] Open
Abstract
BACKGROUND Almost 3500 tick samples, originally collected via a nationwide citizen science campaign in 2015, were screened to reveal the prevalence and distribution of a wide spectrum of established and putative tick-borne pathogens vectored by Ixodes ricinus and I. persulcatus in Finland. The unique geographical distribution of these two tick species in Finland allowed us to compare pathogen occurrence between an I. ricinus-dominated area (southern Finland), an I. persulcatus-dominated area (northern Finland), and a sympatric area (central Finland). RESULTS Of the analysed ticks, almost 30% carried at least one pathogen and 2% carried more than one pathogen. A higher overall prevalence of tick-borne pathogens was observed in I. ricinus than in I. persulcatus: 30.0% (604/2014) versus 24.0% (348/1451), respectively. In addition, I. ricinus were more frequently co-infected than I. persulcatus: 2.4% (49/2014) versus 0.8% (12/1451), respectively. Causative agents of Lyme borreliosis, i.e. bacterial genospecies in Borrelia burgdorferi (sensu lato) group, were the most prevalent pathogens (overall 17%). "Candidatus Rickettsia tarasevichiae" was found for the first time in I. ricinus ticks and in Finnish ticks in general. Moreover, Babesia divergens, B. venatorum and "Candidatus Neoehrlichia mikurensis" were reported for the first time from the Finnish mainland. CONCLUSIONS The present study provides valuable information on the prevalence and geographical distribution of various tick-borne pathogens in I. ricinus and I. persulcatus ticks in Finland. Moreover, this comprehensive subset of ticks revealed the presence of rare and potentially dangerous pathogens. The highest prevalence of infected ticks was in the I. ricinus-dominated area in southern Finland, while the prevalence was essentially equal in sympatric and I. persulcatus-dominated areas. However, the highest infection rates for both species were in areas of their dominance, either in south or north Finland.
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Tomassone L, Portillo A, Nováková M, de Sousa R, Oteo JA. Neglected aspects of tick-borne rickettsioses. Parasit Vectors 2018; 11:263. [PMID: 29690900 PMCID: PMC5937841 DOI: 10.1186/s13071-018-2856-y] [Citation(s) in RCA: 65] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2017] [Accepted: 04/18/2018] [Indexed: 11/26/2022] Open
Abstract
Rickettsioses are among the oldest known infectious diseases. In spite of this, and of the extensive research carried out, many aspects of the biology and epidemiology of tick-borne rickettsiae are far from being completely understood. Their association with arthropod vectors, the importance of vertebrates as reservoirs, the rarity of clinical signs in animals, or the interactions of pathogenic species with rickettsial endosymbionts and with the host intracellular environment, are only some examples. Moreover, new rickettsiae are continuously being discovered. In this review, we focus on the ‘neglected’ aspects of tick-borne rickettsioses and on the gaps in knowledge, which could help to explain why these infections are still emerging and re-emerging threats worldwide.
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Affiliation(s)
- Laura Tomassone
- Department of Veterinary Sciences, University of Turin, Largo Braccini 2, 10095, Grugliasco (Torino), Italy.
| | - Aránzazu Portillo
- Center of Rickettsiosis and Arthropod-Borne Diseases, Hospital San Pedro-CIBIR, C/ Piqueras 98, 26006, Logroño, Spain
| | - Markéta Nováková
- Department of Biology, Faculty of Medicine, Masaryk University, Kamenice 5, 625 00, Brno, Czech Republic.,Department of Biology and Wildlife Diseases, Faculty of Veterinary Hygiene and Ecology, University of Veterinary and Pharmaceutical Sciences Brno, Palackého 1946/1, 612 42, Brno, Czech Republic
| | - Rita de Sousa
- National Institute of Health Dr. Ricardo Jorge, Av. da Liberdade 5, 2965-575, Aguas de Moura, Portugal
| | - José Antonio Oteo
- Center of Rickettsiosis and Arthropod-Borne Diseases, Hospital San Pedro-CIBIR, C/ Piqueras 98, 26006, Logroño, Spain
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Abstract
A vast number of novel tick-related microorganisms and tick-borne disease agents have been identified in the past 20 years, and more are being described due to several factors, from the curiosity of clinicians faced with unusual clinical syndromes to new tools used by microbiologists and entomologists. Borrelioses, ehrlichioses, anaplasmosis, and tick-borne rickettsial diseases are some of the emerging diseases that have been described throughout the world in recent years. In this article, we focus on the bacterial agents and diseases that have been recognized in the past 3 years and refer to major recent reviews of other recognized infections.
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Kartashov MY, Glushkova LI, Mikryukova TP, Korabelnikov IV, Egorova YI, Tupota NL, Protopopova EV, Konovalova SN, Ternovoi VA, Loktev VB. Detection of Rickettsia helvetica and Candidatus R. tarasevichiae DNA in Ixodes persulcatus ticks collected in Northeastern European Russia (Komi Republic). Ticks Tick Borne Dis 2017; 8:588-592. [PMID: 28433730 DOI: 10.1016/j.ttbdis.2017.04.001] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2016] [Revised: 04/04/2017] [Accepted: 04/04/2017] [Indexed: 11/29/2022]
Abstract
The number of tick-borne infections in the northern European regions of Russia has increased considerably in the last years. In the present study, 676 unfed adult Ixodes persulcatus ticks were collected in the Komi Republic from 2011 to 2013 to study tick-borne rickettsioses. Rickettsia spp. DNA was detected by PCR in 51 (7.6%) ticks. The nucleotide sequence analysis of gltA fragments (765bp) from 51 ticks indicated that 60.8% and 39.2% of the ticks were infected with Rickettsia helvetica and Candidatus R. tarasevichiae, respectively. The gltA fragments showed 100% identity with those of Candidatus R. tarasevichiae previously discovered in Siberia and China, whereas R. helvetica showed 99.9% sequence identity with European isolates. The ompB had 8 nucleotide substitutions, 6 of which resulted in amino acid substitutions. In the sca9 gene, 3 nucleotide substitutions were detected, and only one resulted in amino acid substitution. The smpA, ompW, and β-lactamase genes of R. helvetica also showed a high level of sequence identity.
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Affiliation(s)
- Mikhail Yu Kartashov
- State Research Center for Virology and Biotechnology "Vector", Department of Molecular Virology for Flaviviruses and Viral Hepatitis, Koltsovo, Novosibirsk Region, Russia; Novosibirsk State University, Novosibirsk, Russia; Tomsk State University, Tomsk, Russia
| | | | - Tamara P Mikryukova
- State Research Center for Virology and Biotechnology "Vector", Department of Molecular Virology for Flaviviruses and Viral Hepatitis, Koltsovo, Novosibirsk Region, Russia; Tomsk State University, Tomsk, Russia
| | | | | | - Natalia L Tupota
- State Research Center for Virology and Biotechnology "Vector", Department of Molecular Virology for Flaviviruses and Viral Hepatitis, Koltsovo, Novosibirsk Region, Russia
| | - Elena V Protopopova
- State Research Center for Virology and Biotechnology "Vector", Department of Molecular Virology for Flaviviruses and Viral Hepatitis, Koltsovo, Novosibirsk Region, Russia; Tomsk State University, Tomsk, Russia
| | - Svetlana N Konovalova
- State Research Center for Virology and Biotechnology "Vector", Department of Molecular Virology for Flaviviruses and Viral Hepatitis, Koltsovo, Novosibirsk Region, Russia
| | - Vladimir A Ternovoi
- State Research Center for Virology and Biotechnology "Vector", Department of Molecular Virology for Flaviviruses and Viral Hepatitis, Koltsovo, Novosibirsk Region, Russia; Tomsk State University, Tomsk, Russia
| | - Valery B Loktev
- State Research Center for Virology and Biotechnology "Vector", Department of Molecular Virology for Flaviviruses and Viral Hepatitis, Koltsovo, Novosibirsk Region, Russia; Novosibirsk State University, Novosibirsk, Russia; Tomsk State University, Tomsk, Russia; Institute of Cytology and Genetics, Novosibirsk, Russia.
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23
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Liu H, Li Q, Zhang X, Li Z, Wang Z, Song M, Wei F, Wang S, Liu Q. Characterization of rickettsiae in ticks in northeastern China. Parasit Vectors 2016; 9:498. [PMID: 27623998 PMCID: PMC5022169 DOI: 10.1186/s13071-016-1764-2] [Citation(s) in RCA: 67] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2015] [Accepted: 08/19/2016] [Indexed: 12/03/2022] Open
Abstract
Background Tick-borne rickettsioses are considered important emerging zoonoses worldwide, but their etiological agents, rickettsiae, remain poorly characterized in northeastern China, where many human cases have been reported during the past several years. Here, we determined the characteristics of Rickettsia spp. infections in ticks in this area. Methods Ticks were collected by flagging vegetation from Jilin and Heilongjiang provinces of northeastern China followed by morphological identification. The presence of Rickettsia spp. in ticks was detected by PCR targeting the 23S-5S ribosomal RNA intergenic spacer, citrate synthase (gltA) gene, and 190-kDa outer membrane protein gene (ompA). The newly-generated sequences were subjected to phylogenetic analysis using the software MEGA 6.0. Results The overall infection rate of Rickettsia spp. was 6.12 %. Phylogenetic analyses based on the partial gltA and ompA genes demonstrated that rickettsiae detected in the ticks belong to four species, including “Candidatus Rickettsia tarasevichiae”, Rickettsia heilongjiangensis, Rickettsia raoultii, and a potential new species isolate. The associated tick species were also identified, i.e. Dermacentor nuttalli and Dermacentor silvarum for R. raoultii, Haemaphysalis concinna and Haemaphysalis longicornis for R. heilongjiangensis, and Ixodes persulcatus for “Ca. R. tarasevichiae”. All Rickettsia spp. showed significantly high infection rates in ticks from Heilongjiang when compared to Jilin Province. Conclusion Rickettsia heilongjiangensis, R. raoultii and “Ca. R. tarasevichiae” are widely present in the associated ticks in northeastern China, but more prevalent in Heilongjiang Province. The data of this study increase the information on the distribution of Rickettsia spp. in northeastern China, which have important public health implications in consideration of their recent association with human diseases. Electronic supplementary material The online version of this article (doi:10.1186/s13071-016-1764-2) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Huanhuan Liu
- College of Life Science, Jilin Agricultural University, Changchun, People's Republic of China
| | - Qihong Li
- Military Veterinary Institute, Academy of Military Medical Sciences, Key Laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, People's Republic of China.,Affiliated hospital of Academy of Military Medical Science, Beijing, People's Republic of China
| | - Xiaozhuo Zhang
- Military Veterinary Institute, Academy of Military Medical Sciences, Key Laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, People's Republic of China
| | - Zhongyu Li
- College of Life Science, Jilin Agricultural University, Changchun, People's Republic of China
| | - Zedong Wang
- Military Veterinary Institute, Academy of Military Medical Sciences, Key Laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, People's Republic of China
| | - Mingxin Song
- College of Veterinary Medicine, Northeast Agricultural University, Harbin, People's Republic of China
| | - Feng Wei
- College of Life Science, Jilin Agricultural University, Changchun, People's Republic of China
| | - Shuchao Wang
- Military Veterinary Institute, Academy of Military Medical Sciences, Key Laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, People's Republic of China.
| | - Quan Liu
- Military Veterinary Institute, Academy of Military Medical Sciences, Key Laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, People's Republic of China.
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Igolkina Y, Bondarenko E, Rar V, Epikhina T, Vysochina N, Pukhovskaya N, Tikunov A, Ivanov L, Golovljova I, Ivanov М, Tikunova N. Genetic variability of Rickettsia spp. in Ixodes persulcatus ticks from continental and island areas of the Russian Far East. Ticks Tick Borne Dis 2016; 7:1284-1289. [PMID: 27424272 DOI: 10.1016/j.ttbdis.2016.06.005] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2015] [Revised: 04/22/2016] [Accepted: 06/23/2016] [Indexed: 11/15/2022]
Abstract
Rickettsia spp. are intracellular Gram-negative bacteria transmitted by arthropods. Two potentially pathogenic rickettsiae, Candidatus Rickettsia tarasevichiae and Rickettsia helvetica, have been found in unfed adult Ixodes persulcatus ticks. The aim of this study was to assess the prevalence and genetic variability of Rickettsia spp. in I. persulcatus ticks collected from different locations in the Russian Far East. In total, 604 adult I. persulcatus ticks collected from four sites in the Khabarovsk Territory (continental area) and one site in Sakhalin Island were examined for the presence of Rickettsia spp. by real-time PCR. Nested PCR with species-specific primers and sequencing were used for genotyping of revealed rickettsiae. The overall prevalence of Rickettsia spp. in ticks collected in different sites varied from 67.9 to 90.7%. However, the proportion of different Rickettsia species observed in ticks from Sakhalin Island significantly differed from that in ticks from the Khabarovsk Territory. In Sakhalin Island, R. helvetica prevailed in examined ticks, while Candidatus R. tarasevichiae was predominant in the Khabarovsk Territory. For gltA and ompB gene fragments, the sequences obtained for Candidatus R. tarasevichiae from all studied sites were identical to each other and to the known sequences of this species. According to sequence analysis of gltA, оmpB and sca4 genes, R. helvetica isolates from Sakhalin Island and the Khabarovsk Territory were identical to each other, but they differed from R. helvetica from other regions and from those found in other tick species. For the first time, DNA of pathogenic Rickettsia heilongjiangensis was detected in I. persulcatus ticks in two sites from the Khabarovsk Territory. The gltA, ompA and оmpB gene sequences of R. heilongjiangensis were identical to or had solitary mismatches with the corresponding sequences of R. heilongjiangensis found in other tick species.
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Affiliation(s)
- Y Igolkina
- Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russian Federation.
| | - E Bondarenko
- Join-stock company "Vector-Best", Novosibirsk, Russian Federation
| | - V Rar
- Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russian Federation
| | - T Epikhina
- Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russian Federation
| | - N Vysochina
- Khabarovsk Antiplague Station, Khabarovsk, Russian Federation
| | - N Pukhovskaya
- Khabarovsk Antiplague Station, Khabarovsk, Russian Federation
| | - A Tikunov
- Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russian Federation
| | - L Ivanov
- Khabarovsk Antiplague Station, Khabarovsk, Russian Federation
| | - I Golovljova
- Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russian Federation; Department of Virology, National Institute for Health Development, Estonia
| | - М Ivanov
- Join-stock company "Vector-Best", Novosibirsk, Russian Federation
| | - N Tikunova
- Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russian Federation
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25
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Genetic variability of Rickettsia spp. in Ixodes persulcatus/Ixodes trianguliceps sympatric areas from Western Siberia, Russia: Identification of a new Candidatus Rickettsia species. INFECTION GENETICS AND EVOLUTION 2015; 34:88-93. [DOI: 10.1016/j.meegid.2015.07.015] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2015] [Revised: 07/13/2015] [Accepted: 07/14/2015] [Indexed: 11/23/2022]
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Kurilshikov A, Livanova NN, Fomenko NV, Tupikin AE, Rar VA, Kabilov MR, Livanov SG, Tikunova NV. Comparative Metagenomic Profiling of Symbiotic Bacterial Communities Associated with Ixodes persulcatus, Ixodes pavlovskyi and Dermacentor reticulatus Ticks. PLoS One 2015; 10:e0131413. [PMID: 26154300 PMCID: PMC4496043 DOI: 10.1371/journal.pone.0131413] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2015] [Accepted: 06/01/2015] [Indexed: 12/29/2022] Open
Abstract
Ixodes persulcatus, Ixodes pavlovskyi, and Dermacentor reticulatus ticks inhabiting Western Siberia are responsible for the transmission of a number of etiological agents that cause human and animal tick-borne diseases. Because these ticks are abundant in the suburbs of large cities, agricultural areas, and popular tourist sites and frequently attack people and livestock, data regarding the microbiomes of these organisms are required. Using metagenomic 16S profiling, we evaluate bacterial communities associated with I. persulcatus, I. pavlovskyi, and D. reticulatus ticks collected from the Novosibirsk region of Russia. A total of 1214 ticks were used for this study. DNA extracted from the ticks was pooled according to tick species and sex. Sequencing of the V3-V5 domains of 16S rRNA genes was performed using the Illumina Miseq platform. The following bacterial genera were prevalent in the examined communities: Acinetobacter (all three tick species), Rickettsia (I. persulcatus and D. reticulatus) and Francisella (D. reticulatus). B. burgdorferi sensu lato and B. miyamotoi sequences were detected in I. persulcatus and I. pavlovskyi but not in D. reticulatus ticks. The pooled samples of all tick species studied contained bacteria from the Anaplasmataceae family, although their occurrence was low. DNA from A. phagocytophilum and Candidatus Neoehrlichia mikurensis was first observed in I. pavlovskyi ticks. Significant inter-species differences in the number of bacterial taxa as well as intra-species diversity related to tick sex were observed. The bacterial communities associated with the I. pavlovskyi ticks displayed a higher biodiversity compared with those of the I. persulcatus and D. reticulatus ticks. Bacterial community structure was also diverse across the studied tick species, as shown by permutational analysis of variance using the Bray-Curtis dissimilarity metric (p = 0.002). Between-sex variation was confirmed by PERMANOVA testing in I. persulcatus (p = 0.042) and I. pavlovskyi (p = 0.042) ticks. Our study indicated that 16S metagenomic profiling could be used for rapid assessment of the occurrence of medically important bacteria in tick populations inhabiting different natural biotopes and therefore the epidemic danger of studied foci.
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Affiliation(s)
- Alexander Kurilshikov
- Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia
- * E-mail:
| | - Natalya N. Livanova
- Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia
- Institute of Systematics and Ecology of Animals SB RAS, Novosibirsk, Russia
| | - Nataliya V. Fomenko
- Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia
| | - Alexey E. Tupikin
- Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia
| | - Vera A. Rar
- Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia
| | - Marsel R. Kabilov
- Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia
| | | | - Nina V. Tikunova
- Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia
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Detection and identification of Rickettsia species in Ixodes tick populations from Estonia. Ticks Tick Borne Dis 2015; 6:689-94. [PMID: 26096853 DOI: 10.1016/j.ttbdis.2015.06.001] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2014] [Revised: 05/29/2015] [Accepted: 06/01/2015] [Indexed: 11/21/2022]
Abstract
A total of 1640 ticks collected in different geographical parts of Estonia were screened for the presence of Rickettsia species DNA by real-time PCR. DNA of Rickettsia was detected in 83 out of 1640 questing ticks with an overall prevalence of 5.1%. The majority of the ticks infected by rickettsiae were Ixodes ricinus (74 of 83), while 9 of the 83 positive ticks were Ixodes persulcatus. For rickettsial species identification, a part of the citrate synthase gltA gene was sequenced. The majority of the positive samples were identified as Rickettsia helvetica (81 out of 83) and two of the samples were identified as Rickettsia monacensis and Candidatus R. tarasevichiae, respectively. Genetic characterization based on the partial gltA gene showed that the Estonian sequences within the R. helvetica, R. monacensis and Candidatus R. tarasevichiae species demonstrated 100% similarity with sequences deposited in GenBank, originating from Rickettsia species distributed over large territories from Europe to Asia.
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28
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Mediannikov O, Nguyen TT, Bell-Sakyi L, Padmanabhan R, Fournier PE, Raoult D. High quality draft genome sequence and description of Occidentia massiliensis gen. nov., sp. nov., a new member of the family Rickettsiaceae. Stand Genomic Sci 2014; 9:9. [PMID: 25780502 PMCID: PMC4334944 DOI: 10.1186/1944-3277-9-9] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2014] [Accepted: 06/16/2014] [Indexed: 11/10/2022] Open
Abstract
The family Rickettsiaceae currently includes two genera: Orientia that contains one species, Orientiatsutsugamushi, and Rickettsia that contains 28 species. Occidentia massiliensis gen. nov., sp. nov. strain OS118T is the type strain of O. massiliensis gen. nov., sp. nov., the type species of the new genus Occidentia gen. nov. within the family Rickettsiaceae. This strain, whose genome is described here, was isolated in France from the soft tick Ornithodoros sonrai collected in Senegal. O. massiliensis is an aerobic, rod-shaped, Gram-negative, obligate intracellular bacillus that may be cultivated in BME/CTVM2 cells. Here we describe the features of O. massiliensis, together with the complete genomic sequencing and annotation. The 1,469,252 bp long genome (1 chromosome but no plasmid) contains 1,670 protein-coding and 41 RNA genes, including one rRNA operon.
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Affiliation(s)
- Oleg Mediannikov
- URMITE, Aix-Marseille Université, Marseille, France ; URMITE, Campus commun UCAD-IRD d'Hann, Dakar, Senegal
| | | | | | | | | | - Didier Raoult
- URMITE, Aix-Marseille Université, Marseille, France ; Special Infectious Agents Unit, King Fahd Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia
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Eremeeva ME, Shpynov SN, Tokarevich NK. MODERN APPROACHES TO LABORATORY DIAGNOSIS OF RICKETTSIAL DISEASES. RUSSIAN JOURNAL OF INFECTION AND IMMUNITY 2014. [DOI: 10.15789/2220-7619-2014-2-113-134] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Abstract
Abstract. We present a concise review of contemporary laboratory methods for diagnosis of rickettsioses with special emphasis on diseases known in Russian Federation. Classic and emerging rickettsioses are transmitted by a diverse and expanding group of arthropod vectors including ticks, fleas, lice and mites. While epidemiological and clinical clues can provide information important for initial suspicion of rickettsial infection, sensitive and specific laboratory methods are necessary for providing probable or confirmed diagnosis of the rickettsial infection. Accurate and rapid confirmation of rickettsial infection is important for ensuring proper clinical care and prompt initiation of antibiotic therapy. Correct identification of the etiology of rickettsial diseases is also important for early identification of clustered cases, novel foci of infections, and for timely initiation of public health responses to these potentially fatal infections.
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Movila A, Dubinina HV, Sitnicova N, Bespyatova L, Uspenskaia I, Efremova G, Toderas I, Alekseev AN. Comparison of tick-borne microorganism communities in Ixodes spp. of the Ixodes ricinus species complex at distinct geographical regions. EXPERIMENTAL & APPLIED ACAROLOGY 2014; 63:65-76. [PMID: 24356921 DOI: 10.1007/s10493-013-9761-z] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2013] [Accepted: 12/04/2013] [Indexed: 06/03/2023]
Abstract
Characterizing the tick-borne microorganism communities of Ixodes ricinus (sheep tick) and Ixodes persulcatus (taiga tick) from the I. ricinus species complex in distinct geographical regions of Eastern Europe and European Russia, we demonstrated differences between the two ticks. Taiga ticks were more frequently mono- and co-infected than sheep ticks: 24.4 % (45/184 tested ticks) versus 17.5 % (52/297) and 4.3 % (8/184) versus 3.4 % (10/297), respectively. Ginsberg co-infection index values were significant at the various sites. Diversity of the tick-borne microorganism communities was estimated by the Shannon index, reaching values of 1.71 ± 0.46 and 1.20 ± 0.15 at the sheep-tick and the taiga-tick harbored sites, respectively. Richness of the tick-borne microorganism community in the sheep tick collection sites was about twice the value of the taiga tick collection sites. Future investigations are warranted to further characterize the peculiarities of the tick-borne microorganism communities among the ticks of the Ixodes ricinus complex.
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Affiliation(s)
- Alexandru Movila
- Zoological Institute, Russian Academy of Sciences, Universitetskaya emb., 1, St-Petersburg, 199034, Moscow, Russia,
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Detection of a novel Rickettsia (Alphaproteobacteria: Rickettsiales) in rotund ticks (Ixodes kingi) from Saskatchewan, Canada. Ticks Tick Borne Dis 2013; 4:202-6. [PMID: 23419865 DOI: 10.1016/j.ttbdis.2012.11.013] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2012] [Revised: 11/19/2012] [Accepted: 11/27/2012] [Indexed: 11/21/2022]
Abstract
A novel Rickettsia was detected in the rotund tick, Ixodes kingi Bishopp, 1911, based on comparative DNA sequence analyses of 4 genes; the rickettsial-specific 17-kDa antigen gene, citrate synthase gene (gltA), the outer surface membrane protein A gene (ompA), and the 16S rRNA gene. The rickettsiae in I. kingi differed in nucleotide sequence from those of other Rickettsia species by 5.8-18.3% for the 17-kDa gene, 0.9-13.9% for gltA, 5.5-22.8% for ompA, and 0.9-1.6% for the 16S rRNA gene. Phylogenetic analyses of the sequence data revealed that this putative new species of Rickettsia, provisionally named Candidatus Rickettsia kingi, does not belong to the spotted fever group or typhus group of rickettsiae, but represents a sister taxon to R. canadensis and Candidatus Rickettsia tarasevichiae. This novel Rickettsia was found in 60 of the 87 (69%) ticks examined, which included all feeding life cycle stages of I. kingi. Although adult I. kingi occasionally parasitize dogs and humans, it remains to be determined if this Rickettsia is pathogenic to these host species.
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Abstract
Ixodes persulcatus Schulze, 1930 (I. persulcatus) is distributed from the western to the eastern borders of Russia where it is found in the taiga and in mixed forests of the European type. This tick is a known vector of viral (tick-borne encephalitis virus), spirochetal (Borrelia spp.), and protozoan (Babesia spp.) agents. In this work, we analyzed the phylogenetic position of I. persulcatus within the Prostriata based on its 18S rRNA gene. Furthermore, we review the relationship of this tick with 9 Alphaproteobacteria from the genera Rickettsia, Ehrlichia, and Anaplasma which are found in I. persulcatus in the territory of Russia. These observations suggest that I. persulcatus may be one of the more important vectors and reservoirs of Alphaproteobacteria and other microorganisms in Russia.
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Affiliation(s)
- Stanislav Shpynov
- FBUN Omsk Scientific Research Institute of Natural Focal Infections, 7, Prospect Myra, Omsk 644080, Russia.
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Zou Y, Wang Q, Fu Z, Liu P, Jin H, Yang H, Gao H, Xi Z, Liu Q, Chen L. Detection of spotted fever group Rickettsia in Haemaphysalis longicornis from Hebei Province, China. J Parasitol 2011; 97:960-2. [PMID: 21506802 DOI: 10.1645/ge-2751.1] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Abstract
DNA samples from 737 tick pools, representing 6,850 Haemaphysalis longicornis and 51 Dermacentor nuttalli collected from Hebei Province, China, were analyzed by polymerase chain reaction (PCR) for the presence of spotted fever group Rickettsia. Fifty (6.9%) of 724 H. longicornis in the tick pool were positive, but no positive samples were found in 13 D. nuttalli. Sequence analysis of the partial outer membrane protein A (ompA) genes from the 10 positive samples showed 97.4-99.8% identity, but were different from the homologous sequence of Rickettsia previously deposited in GenBank. Phylogenetic analysis of ompA genes indicated that the Rickettsia detected in this study belonged to a novel haplotype, and formed a clade distinct from Rickettsia heilongjiangii, Rickettsia sibirica, and Rickettsia hulinii in China. The new strain, named Candidatus Rickettsia hebeiii, appears to represent a distinct lineage and could constitute a new species with a minimum prevalence of about 0.7% in H. longicornis from Hebei Province, China.
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Affiliation(s)
- Yaxue Zou
- Key Laboratory of Preventive Veterinary Medicine in Hebei Province, Hebei Normal University of Science & Techology, 360 Hebei Street, Qinhuangdao, 066000, China
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35
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Livanova NN, Livanov SG. Zoological prerequisites of human tick-borne infections in the Northern Urals. BIOL BULL+ 2010. [DOI: 10.1134/s1062359010070101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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36
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Merhej V, Raoult D. Rickettsial evolution in the light of comparative genomics. Biol Rev Camb Philos Soc 2010; 86:379-405. [DOI: 10.1111/j.1469-185x.2010.00151.x] [Citation(s) in RCA: 183] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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37
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Movila A, Rolain JM, Podavalenko A, Toderas I, Tkachenco L, Naglov V, Raoult D. Detection of spotted fever group rickettsiae and family Anaplasmataceae in Ixodes ricinus ticks from Republic of Moldova and Eastern Ukraine. Clin Microbiol Infect 2009; 15 Suppl 2:32-3. [DOI: 10.1111/j.1469-0691.2008.02152.x] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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38
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Rudakov NV, Schpynov SN, Samoylenko IE, Fournier PE, Reschetnikova TA, Kumpan LV, Raoult D. Characterisation of the Omsk collection of rickettsial strains. Clin Microbiol Infect 2009; 15 Suppl 2:298-9. [PMID: 19793118 DOI: 10.1111/j.1469-0691.2008.02246.x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- N V Rudakov
- Omsk Research Institute of Natural Foci Infections, Omsk State Medical Academy, prospect Mira, Omsk, Russia.
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Popov VL, Korenberg EI, Nefedova VV, Han VC, Wen JW, Kovalevskii YV, Gorelova NB, Walker DH. Ultrastructural Evidence of the Ehrlichial Developmental Cycle in Naturally InfectedIxodes persulcatusTicks in the Course of Coinfection with Rickettsia, Borrelia, and a Flavivirus. Vector Borne Zoonotic Dis 2007; 7:699-716. [DOI: 10.1089/vbz.2007.0148] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Affiliation(s)
- Vsevolod L. Popov
- Department of Pathology, The University of Texas Medical Branch, Galveston, Texas
- Center for Biodefense and Emerging Infectious Diseases, Galveston, Texas
| | - Edward I. Korenberg
- N.F. Gamaleya Research Institute for Epidemiology and Microbiology, Russian Academy of Medical Sciences, Moscow, Russia
| | - Valentina V. Nefedova
- N.F. Gamaleya Research Institute for Epidemiology and Microbiology, Russian Academy of Medical Sciences, Moscow, Russia
| | - Violet C. Han
- Department of Pathology, The University of Texas Medical Branch, Galveston, Texas
| | - Julie W. Wen
- Department of Pathology, The University of Texas Medical Branch, Galveston, Texas
| | - Yurii V. Kovalevskii
- N.F. Gamaleya Research Institute for Epidemiology and Microbiology, Russian Academy of Medical Sciences, Moscow, Russia
| | - Natalia B. Gorelova
- N.F. Gamaleya Research Institute for Epidemiology and Microbiology, Russian Academy of Medical Sciences, Moscow, Russia
| | - David H. Walker
- Department of Pathology, The University of Texas Medical Branch, Galveston, Texas
- Center for Biodefense and Emerging Infectious Diseases, Galveston, Texas
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Matsumoto K, Parola P, Rolain JM, Jeffery K, Raoult D. Detection of "Rickettsia sp. strain Uilenbergi" and "Rickettsia sp. strain Davousti" in Amblyomma tholloni ticks from elephants in Africa. BMC Microbiol 2007; 7:74. [PMID: 17683629 PMCID: PMC1988807 DOI: 10.1186/1471-2180-7-74] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2007] [Accepted: 08/07/2007] [Indexed: 11/21/2022] Open
Abstract
Background To date, 6 tick-borne rickettsiae pathogenic for humans are known to occur in Africa and 4 of them were first identified in ticks before being recognized as human pathogens. Results We examined 33 and 5 Amblyomma tholloni ticks from African elephants in the Central African Republic and Gabon, respectively, by PCR amplification and sequencing of a part of gltA and ompA genes of the genus Rickettsia. The partial sequences of gltA and ompA genes detected in tick in Gabon had 99.1% similarity with those of R. heilongjiangensis and 97.1% with those of Rickettsia sp. HL-93 strain, respectively. The partial gltA and ompA gene sequences detected in tick in the Central African Republic were 98.9% and 95.1% similar to those of Rickettsia sp. DnS14 strain and R. massiliae, respectively. Phylogenetic analysis showed Rickettsia sp. detected in Gabon clusters with R. japonica and R. heilongjiangensis in a phylogenetic tree based on the partial gltA and ompA genes. The genotype of the Rickettsia sp. detected in the Central African Republic is close to those of R. massiliae group in the phylogenetic tree based on partial gltA gene sequences, and distantly related to other rickettsiae in the tree based on partial ompA gene. Conclusion The degrees of similarity of partial gltA and ompA genes with recognized species indicate the rickettsiae detected in this study may be new species although we could only study the partial sequences of 2 genes regarding the amount of DNA that was available. We propose the Rickettsia sp. detected in Gabon be provisionally named "Rickettsia sp. stain Davousti" and Rickettsia sp. detected in the Central African Republic be named "Rickettsia sp. strain Uilenbergi".
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Affiliation(s)
- Kotaro Matsumoto
- Unité des Rickettsies, CNRS UMR 6020 IFR 48, Faculté de Médecine, Marseille, France
| | - Philippe Parola
- Unité des Rickettsies, CNRS UMR 6020 IFR 48, Faculté de Médecine, Marseille, France
| | - Jean-Marc Rolain
- Unité des Rickettsies, CNRS UMR 6020 IFR 48, Faculté de Médecine, Marseille, France
| | | | - Didier Raoult
- Unité des Rickettsies, CNRS UMR 6020 IFR 48, Faculté de Médecine, Marseille, France
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Chahan B, Jian Z, Miyahara K, Tanabe S, Xuan X, Sato Y, Moritomo T, Nogami S, Mikami T, Maruyama S, Inokuma H. Detection of DNA closely related to ‘Candidatus Rickettsia principis’ in Haemaphysalis danieli recovered from cattle in Xinjiang Uygur Autonomous Region Area, China. Vet Parasitol 2007; 144:184-7. [PMID: 17052853 DOI: 10.1016/j.vetpar.2006.09.019] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2006] [Revised: 09/04/2006] [Accepted: 09/13/2006] [Indexed: 10/24/2022]
Abstract
Tick DNA samples from cattle in Xinjiang Uygur Autonomous Region Area, China, were examined for Rickettsia infection by citrate synthase gene-based PCR and sequencing. Four positive samples were detected from Haemaphysalis danieli and high levels of similarity were found with recently detected 'Candidatus Rickettsia principis.'
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Affiliation(s)
- Bayin Chahan
- Veterinary College, Xingjiang Agricultural University, Urumqui, China
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42
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Samoylenko IE, Kumpan LV, Shpynov SN, Obert AS, Butakov OV, Rudakov NV. Methods of isolation and cultivation of new Rickettsiae from the Nosoarea of the north Asian tick typhus in Siberia. Ann N Y Acad Sci 2007; 1078:613-6. [PMID: 17114789 DOI: 10.1196/annals.1374.035] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- I E Samoylenko
- Omsk Research Institute of Natural Foci Infections, 644080, Prospekt Mira, 7 Omsk, Russia.
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Inokuma H, Ohashi M, Tanabe S, Miyahara K. Prevalence of Tick-Borne Rickettsia and Ehrlichia in Ixodes persulcatus and Ixodes ovatus in Tokachi District, Eastern Hokkaido, Japan. J Vet Med Sci 2007; 69:661-4. [PMID: 17611367 DOI: 10.1292/jvms.69.661] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
DNA from 111 ticks collected by flagging in Tokachi district, Eastern Hokkaido, Japan were examined for infection with Rickettsia and Ehrlichia, by PCR and sequencing methodology. For Rickettsia, analysis of the partial sequence of the citrate synthase gene was successfully performed on 11 DNA samples from I. persulcatus, and 7 of them showed 99.8% identical with Rickettsia helvetica while the other 4 showed 99.8% identical with ;Candidatus Rickettsia tarasevichiae'. For Ehrlichia, a partial sequence of the 16S rRNA gene detected from I. persulcatus was 100% identical with that from Ehrlichia muris, and another DNA sample from I. ovatus showed 99.8% identical with Ehrlichia species detected from I. ovatus. The results suggest that the pathogens detected here might be distributed in this area.
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Affiliation(s)
- Hisashi Inokuma
- Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Japan
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44
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Eremeeva ME, Oliveira A, Robinson JB, Ribakova N, Tokarevich NK, Dasch GA. Prevalence of Bacterial Agents in Ixodes persulcatus Ticks from the Vologda Province of Russia. Ann N Y Acad Sci 2006; 1078:291-8. [PMID: 17114724 DOI: 10.1196/annals.1374.054] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
The prevalence of rickettsiae, ehrlichiae, and the rickettsia-like endosymbiont called Montezuma relative to that of Borrelia was determined in questing Ixodes persulcatus (I. persulcatus) ticks collected in 2002-2003 from Vologda Province, Russia. Ehrlichia muris, Anaplasma phagocytophilum, Montezuma, and new spotted fever group rickettsiae were detected by polymerase chain reaction (PCR) for the first time in this area. The rickettsiae were all Candidatus Rickettsia tarasevichiae, the furthest west this organism has been detected. After Borrelia, Montezuma was the agent most frequently detected; it may be present throughout the distribution of I. persulcatus in Russia. Ehrlichiae and rickettsiae frequently share the same tick host with Borrelia burgdorferi sensu lato so cotransmission and mixed infections in vertebrate hosts, including humans, may occur.
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Affiliation(s)
- Marina E Eremeeva
- Viral and Rickettsial Zoonoses Branch, Mail Stop G-13, National Center for Infectious Diseases, Centers for Disease Control and Prevention, 1600 Clifton Road NE, Atlanta, GA 30333, USA.
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45
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Mediannikov O, Sidelnikov Y, Ivanov L, Fournier PE, Tarasevich I, Raoult D. Far Eastern Tick-Borne Rickettsiosis: Identification of Two New Cases and Tick Vector. Ann N Y Acad Sci 2006; 1078:80-8. [PMID: 17114683 DOI: 10.1196/annals.1374.010] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
We recently reported the first documented cases of a new rickettsial disease caused by Rickettsia heilongjiangensis in the Russian Far East (Far Eastern tick-borne rickettsiosis). Here we report the amplification of DNA of R. heilongjiangensis from both the skin biopsy of an acutely ill patient and the tick removed from him prior to the disease development. The tick has been identified as Haemaphysalis spp. The clinical picture was that of a spotted fever group rickettsiosis and a seroconversion was noted with R. heilongjiangensis antigen. Screening testing of both species of Haemaphysalis ticks inhabiting Russian Far Eastern regions showed that up to 28.13% of H. concinnae and 4.48% of H. japonica douglasii ticks harbor R. heilongjiangensis. It has been concluded that H. concinnae may serve as the main vector for the transmission of R. heilongjiangensis. H. japonica douglasii ticks harbor several varieties of rickettsiae. DNA of "Candidatus Rickettsia tarasevichiae," previously found in Ixodes persulcatus ticks, was amplified from one male tick. Two sequenced complete gltA genes belong to the novel spotted fever group rickettsial species provisionally called here "Candidatus Rickettsia principis" variants Hjd54 and Hjd61. The rate of infection has been found to be not higher than 1.5%.
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Affiliation(s)
- Oleg Mediannikov
- Laboratory of Rickettsial Ecology, Gamaleya Institute of Epidemiology and Microbiology, ul. Gamalei, 18, Moscow, Russia.
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Rudakov N, Shpynov S, Fournier PE, Raoult D. Ecology and Molecular Epidemiology of Tick-Borne Rickettsioses and Anaplasmoses with Natural Foci in Russia and Kazakhstan. Ann N Y Acad Sci 2006; 1078:299-304. [PMID: 17114725 DOI: 10.1196/annals.1374.009] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
During our more than 20 years of monitoring, we have used epidemiological, field, and experimental methods for characterization of natural foci of tick-borne rickettsioses in Russia. The main results were obtained through genetic methods (PCR sequence) at the Université de la Mediterranée (Marseille, France). We describe considerable heterogeneity of tick-borne alpha(1)-proteobacteria: 16 microorganisms the of the order Rickettsiales were detected in Russia and Kazakhstan. R. sibirica-caused North Asiatic tick-borne rickettsiosis is the main tick-borne rickettsiosis in Russia, with wide distribution in Siberia and the Russian Far East and high epidemic activity of natural foci of different landscape types. Our results show circulation of different pathogenic rickettsiae in the same endemic territories. In the Far East region, R. sibirica subsp. R. sibirica, R. sibirica subsp. BJ-90, and R. heilongjiangensis were detected; in the Altay and Krasnojarsk regions, R. sibirica subsp. R. sibirica and R. heilongjiangensis; and in the Kurgan district of West Siberia, R. sibirica subsp. R. sibirica and R. slovaca. The roles of more than 15 new genotypes of alpha(1)-proteobacteria in infectious disease in Russia and Kazakhstan are in need of further study.
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Affiliation(s)
- Nikolay Rudakov
- Omsk Research Institute of Natural Foci Infections, 644080, prospect Mira, 7 Omsk, Russia.
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Shpynov S, Fournier PE, Rudakov N, Tarasevich I, Raoult D. Detection of Members of the Genera Rickettsia, Anaplasma, and Ehrlichia in Ticks Collected in the Asiatic Part of Russia. Ann N Y Acad Sci 2006; 1078:378-83. [PMID: 17114745 DOI: 10.1196/annals.1374.075] [Citation(s) in RCA: 73] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
A total of 395 adult ixodid ticks from three genera (Dermacentor, Haemaphysalis, and Ixodes) collected from the Urals to the Far East of Russia were tested by PCR and sequencing for the presence of spotted fever rickettsiae, anaplasmae, and ehrlichiae. Four, pathogens recognized in humans were detected in ticks: Rickettsia sibirica, R. heilongjiangensis, R. helvetica, and Anaplasma phagocytophilum. In addition, rickettsiae and ehrlichiae of unknown pathogenicity were detected, including Rickettsia sp. RpA4, Rickettsia sp. DnS14, Rickettsia sp. DnS28, "Candidatus R. tarasevichiae," a rickettsia closely related to R. helvetica, A. bovis, Ehrlichia muris, "Ehrlichia-like" "Schotti variant," and bacterium "Montezuma." Our findings indicated the distribution of rickettsiae and ehrlichiae in hard ticks in Russia.
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Affiliation(s)
- Stanislav Shpynov
- Unité des Rickettsies CNRS UMR6020, IFR48, Faculté de Médecine, Université de la Méditerranée, 27 Boulevard Jean Moulin, 13385 Marseille Cedex 05, France
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48
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Abstract
The best-known members of the bacterial genus Rickettsia are associates of blood-feeding arthropods that are pathogenic when transmitted to vertebrates. These species include the agents of acute human disease such as typhus and Rocky Mountain spotted fever. However, many other Rickettsia have been uncovered in recent surveys of bacteria associated with arthropods and other invertebrates; the hosts of these bacteria have no relationship with vertebrates. It is therefore perhaps more appropriate to consider Rickettsia as symbionts that are transmitted vertically in invertebrates, and secondarily as pathogens of vertebrates. In this review, we highlight the emerging diversity of Rickettsia species that are not associated with vertebrate pathogenicity. Phylogenetic analysis suggests multiple transitions between symbionts that are transmitted strictly vertically and those that exhibit mixed (horizontal and vertical) transmission. Rickettsia may thus be an excellent model system in which to study the evolution of transmission pathways. We also focus on the emergence of Rickettsia as a diverse reproductive manipulator of arthropods, similar to the closely related Wolbachia, including strains associated with male-killing, parthenogenesis, and effects on fertility. We emphasize some outstanding questions and potential research directions, and suggest ways in which the study of non-pathogenic Rickettsia can advance our understanding of their disease-causing relatives.
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Affiliation(s)
- Steve J Perlman
- Department of Botany, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada.
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Stańczak J. Detection of spotted fever group (SFG) rickettsiae in Dermacentor reticulatus (Acari: Ixodidae) in Poland. Int J Med Microbiol 2006; 296 Suppl 40:144-8. [PMID: 16524778 DOI: 10.1016/j.ijmm.2006.01.014] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022] Open
Abstract
Dermacentor reticulatus ticks from Poland were investigated by molecular methods for the presence of rickettsiae. During 2003/2004, a total of 285 adult ticks was assayed using primers RpCS.877 and RpCS.1258 derived from the citrate synthase (gltA) gene, and 116 samples (40.7%) were positive for rickettsial DNA. Ten out of these positive samples were further assayed using SLO1F and SLO1R primers derived form the rOmpA-encoding gene to confirm that detected rickettsiae belong to the spotted fever group (SFG). The obtained sequence of a fragment of the gltA gene of Rickettsia sp. isolated from Polish D. reticulatus demonstrated 96-98% similarities to Rickettsia slovaca, Rickettsia sibirica, Rickettsia honei, and other SFG rickettsiae. The nucleotide sequences of the amplified fragments of the ompA gene were 98% homologous to RpA4 Rickettsia sp. reported from ticks collected in territories of the former Soviet Union.
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Affiliation(s)
- Joanna Stańczak
- Department of Tropical Parasitology, Institute of Maritime and Tropical Medicine, Medical University of Gdańsk, 9B Powstania Styczniowego str., PL-81519 Gdynia, Poland.
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50
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Raoult D, Fournier PE, Eremeeva M, Graves S, Kelly PJ, Oteo JA, Sekeyova Z, Tamura A, Tarasevich I, Zhang L. Naming of Rickettsiae and Rickettsial Diseases. Ann N Y Acad Sci 2005; 1063:1-12. [PMID: 16481485 DOI: 10.1196/annals.1355.002] [Citation(s) in RCA: 70] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Over the last 20 years, advances in molecular techniques have greatly facilitated the identification of the members of the Rickettsiales, and numerous new species and diseases have been described. In this paper, we review taxonomic rules and appropriate approaches to valid naming of rickettsial species and the diseases they cause.
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Affiliation(s)
- Didier Raoult
- Unité des Rickettsies, IFR 48, CNRS UMR 6020, Faculté de Médecine, Université de la Méditerranée, 13385 Marseille Cedex 05, France.
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