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Bogaert KA, Zakka EE, Coelho SM, De Clerck O. Polarization of brown algal zygotes. Semin Cell Dev Biol 2023; 134:90-102. [PMID: 35317961 DOI: 10.1016/j.semcdb.2022.03.008] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Revised: 03/01/2022] [Accepted: 03/03/2022] [Indexed: 11/29/2022]
Abstract
Brown algae are a group of multicellular, heterokont algae that have convergently evolved developmental complexity that rivals that of embryophytes, animals or fungi. Early in development, brown algal zygotes establish a basal and an apical pole, which will become respectively the basal system (holdfast) and the apical system (thallus) of the adult alga. Brown algae are interesting models for understanding the establishment of cell polarity in a broad evolutionary context, because they exhibit a large diversity of life cycles, reproductive strategies and, importantly, their zygotes are produced in large quantities free of parental tissue, with symmetry breaking and asymmetric division taking place in a highly synchronous manner. This review describes the current knowledge about the establishment of the apical-basal axis in the model brown seaweeds Ectocarpus, Dictyota, Fucus and Saccharina, highlighting the advantages and specific interests of each system. Ectocarpus is a genetic model system that allows access to the molecular basis of early development and life-cycle control over apical-basal polarity. The oogamous brown alga Fucus, together with emerging comparative models Dictyota and Saccharina, emphasize the diversity of strategies of symmetry breaking in determining a cell polarity vector in brown algae. A comparison with symmetry-breaking mechanisms in land plants, animals and fungi, reveals that the one-step zygote polarisation of Fucus compares well to Saccharomyces budding and Arabidopsis stomata development, while the two-phased symmetry breaking in the Dictyota zygote compares to Schizosaccharomyces fission, the Caenorhabditis anterior-posterior zygote polarisation and Arabidopsis prolate pollen polarisation. The apical-basal patterning in Saccharina zygotes on the other hand, may be seen as analogous to that of land plants. Overall, brown algae have the potential to bring exciting new information on how a single cell gives rise to an entire complex body plan.
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Affiliation(s)
- Kenny A Bogaert
- Phycology Research Group, Department of Biology, Ghent University, Krijgslaan 281 S8, B-9000 Ghent, Belgium.
| | - Eliane E Zakka
- Phycology Research Group, Department of Biology, Ghent University, Krijgslaan 281 S8, B-9000 Ghent, Belgium
| | - Susana M Coelho
- Department of Algal Development and Evolution, Max Planck Institute for Biology, Tübingen, Germany
| | - Olivier De Clerck
- Phycology Research Group, Department of Biology, Ghent University, Krijgslaan 281 S8, B-9000 Ghent, Belgium
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2
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Linardić M, Braybrook SA. Identification and selection of optimal reference genes for qPCR-based gene expression analysis in Fucus distichus under various abiotic stresses. PLoS One 2021; 16:e0233249. [PMID: 33909633 PMCID: PMC8081170 DOI: 10.1371/journal.pone.0233249] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2020] [Accepted: 02/18/2021] [Indexed: 11/19/2022] Open
Abstract
Quantitative gene expression analysis is an important tool in the scientist's belt. The identification of evenly expressed reference genes is necessary for accurate quantitative gene expression analysis, whether by traditional RT-PCR (reverse-transcription polymerase chain reaction) or by qRT-PCR (quantitative real-time PCR; qPCR). In the Stramenopiles (the major line of eukaryotes that includes brown algae) there is a noted lack of known reference genes for such studies, largely due to the absence of available molecular tools. Here we present a set of nine reference genes (Elongation Factor 1 alpha (EF1A), Elongation Factor 2 alpha (EF2A), Elongation Factor 1 beta (EF1B), 14-3-3 Protein, Ubiquitin Conjugating Enzyme (UBCE2), Glyceraldehyde-3-phosphate Dehydrogenase (GAPDH), Actin Related Protein Complex (ARP2/3), Ribosomal Protein (40s; S23), and Actin) for the brown alga Fucus distichus. These reference genes were tested on adult sporophytes across six abiotic stress conditions (desiccation, light and temperature modification, hormone addition, pollutant exposure, nutrient addition, and wounding). Suitability of these genes as reference genes was quantitatively evaluated across conditions using standard methods and the majority of the tested genes were evaluated favorably. However, we show that normalization genes should be chosen on a condition-by-condition basis. We provide a recommendation that at least two reference genes be used per experiment, a list of recommended pairs for the conditions tested here, and a procedure for identifying a suitable set for an experimenter's unique design. With the recent expansion of interest in brown algal biology and accompanied molecular tools development, the variety of experimental conditions tested here makes this study a valuable resource for future work in basic biology and understanding stress responses in the brown algal lineage.
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Affiliation(s)
- Marina Linardić
- Department of Molecular, Cell and Developmental Biology, University of California Los Angeles, Los Angeles, California, United States of America
- Department of Energy Institute of Genomics and Proteomics, University of California Los Angeles, Los Angeles, California, United States of America
| | - Siobhan A. Braybrook
- Department of Molecular, Cell and Developmental Biology, University of California Los Angeles, Los Angeles, California, United States of America
- Department of Energy Institute of Genomics and Proteomics, University of California Los Angeles, Los Angeles, California, United States of America
- Molecular Biology Institute, University of Los Angeles, Los Angeles, California, United States of America
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3
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Abstract
Model organisms are extensively used in research as accessible and convenient systems for studying a particular area or question in biology. Traditionally, only a limited number of organisms have been studied in detail, but modern genomic tools are enabling researchers to extend beyond the set of classical model organisms to include novel species from less-studied phylogenetic groups. This review focuses on model species for an important group of multicellular organisms, the brown algae. The development of genetic and genomic tools for the filamentous brown alga Ectocarpus has led to it emerging as a general model system for this group, but additional models, such as Fucus or Dictyota dichotoma, remain of interest for specific biological questions. In addition, Saccharina japonica has emerged as a model system to directly address applied questions related to algal aquaculture. We discuss the past, present, and future of brown algal model organisms in relation to the opportunities and challenges in brown algal research.
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Affiliation(s)
- Susana M Coelho
- Laboratory of Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff (SBR), CNRS, Sorbonne Université, 29680 Roscoff, France;
- Current affiliation: Department of Algal Development and Evolution, Max Planck Institute for Developmental Biology, 72076 Tübingen, Germany;
| | - J Mark Cock
- Laboratory of Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff (SBR), CNRS, Sorbonne Université, 29680 Roscoff, France;
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4
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Hříbková H, Grabiec M, Klemová D, Slaninová I, Sun YM. Five steps to form neural rosettes: structure and function. J Cell Sci 2018; 131:jcs.206896. [DOI: 10.1242/jcs.206896] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2017] [Accepted: 12/18/2017] [Indexed: 12/25/2022] Open
Abstract
Neural rosette formation is a critical morphogenetic process during neural development, whereby neural stem cells are enclosed in rosette niches to equipoise proliferation and differentiation. How neural rosettes form and provide a regulatory micro-environment remains to be elucidated. We employed the human embryonic stem cell-based neural rosette system to investigate the structural development and function of neural rosettes. Our study shows that neural rosette formation consists of 5 types of cell movements: intercalation, constriction, polarization, elongation, and lumen formation. Ca2+ signaling plays a pivotal role in the five steps by regulating the actions of the cytoskeletal complexes, ACTIN, MYOSIN II, and TUBULIN during intercalation, constriction, and elongation. These in turn control the polarizing elements, ZO-1, PARD3, and β-CATENIN during polarization and lumen formation in neural rosette formation. We further demonstrated that the dismantlement of neural rosettes, mediated by the destruction of cytoskeletal elements, promoted neurogenesis and astrogenesis prematurely, indicating that an intact rosette structure is essential for orderly neural development.
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Affiliation(s)
- Hana Hříbková
- Department of Biology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
| | - Marta Grabiec
- Department of Biology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
| | - Dobromila Klemová
- Department of Histology and Embryology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
| | - Iva Slaninová
- Department of Biology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
| | - Yuh-Man Sun
- Department of Biology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
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Universality and Diversity of a Fast, Electrical Block to Polyspermy During Fertilization in Animals. DIVERSITY AND COMMONALITY IN ANIMALS 2018. [DOI: 10.1007/978-4-431-56609-0_24] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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Charrier B, Abreu MH, Araujo R, Bruhn A, Coates JC, De Clerck O, Katsaros C, Robaina RR, Wichard T. Furthering knowledge of seaweed growth and development to facilitate sustainable aquaculture. THE NEW PHYTOLOGIST 2017; 216:967-975. [PMID: 28800196 DOI: 10.1111/nph.14728] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Macroalgae (seaweeds) are the subject of increasing interest for their potential as a source of valuable, sustainable biomass in the food, feed, chemical and pharmaceutical industries. Compared with microalgae, the pace of knowledge acquisition in seaweeds is slower despite the availability of whole-genome sequences and model organisms for the major seaweed groups. This is partly a consequence of specific hurdles related to the large size of these organisms and their slow growth. As a result, this basic scientific field is falling behind, despite the societal and economic importance of these organisms. Here, we argue that sustainable management of seaweed aquaculture requires fundamental understanding of the underlying biological mechanisms controlling macroalgal life cycles - from the production of germ cells to the growth and fertility of the adult organisms - using diverse approaches requiring a broad range of technological tools. This Viewpoint highlights several examples of basic research on macroalgal developmental biology that could enable the step-changes which are required to adequately meet the demands of the aquaculture sector.
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Affiliation(s)
- Bénédicte Charrier
- Morphogenesis of Macroalgae, UMR8227, CNRS-UPMC, Station Biologique, Roscoff, 29680, France
| | - Maria Helena Abreu
- Travessa Alexandre da Conceição, ALGAplus Lda, Ílhavo, 3830-196, Portugal
| | - Rita Araujo
- Water and Marine Resources Unit, Joint Research Centre - Directorate for Sustainable Resources, European Commission, via E. Fermi, Ispra (VA), 2749-21027, Italy
| | - Annette Bruhn
- Department of BioScience, Aarhus University, Vejlsøvej 25, Silkeborg, 8600, Denmark
| | - Juliet C Coates
- School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK
| | - Olivier De Clerck
- Department of Biology, Ghent University, Krijgslaan 281 S8, Ghent, 9000, Belgium
| | - Christos Katsaros
- Department of Biology, Morphogenesis of Macroalgae, National and Kapodistrian University of Athens, Athens, 157 84, Greece
| | - Rafael R Robaina
- Facultad de Ciencias del Mar, Universidad de Las Palmas de Gran Canaria, Las Palmas de Gran Canaria, 35017, Spain
| | - Thomas Wichard
- Institute for Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Lessingstr. 8, Jena, 07743, Germany
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7
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Bogaert KA, Beeckman T, De Clerck O. Egg activation-triggered shape change in the Dictyota dichotoma (Phaeophyceae) zygote is actin-myosin and secretion dependent. ANNALS OF BOTANY 2017; 120:529-538. [PMID: 28961769 PMCID: PMC5737549 DOI: 10.1093/aob/mcx085] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2017] [Accepted: 06/07/2017] [Indexed: 06/07/2023]
Abstract
Background and Aims Cellular morphogenesis in land plants and brown algae is typically a slow process involving growth established by an interplay of turgor pressure and cell wall rigidity. However, a recent study showed that zygotes of the brown alga Dictyota dichotoma undergo a rapid shape change from a sphere to an elongated spheroid in about 90 s, establishing the first body axis. Methods Using a combination of pharmacology, staining techniques, membrane depolarization and microscopy techniques (brightfield, transmission electron microscopy and confocal laser scanning microscopy), egg activation and the shape change of the egg cell of D. dichotoma was studied. Key Results It was established that elongation of the zygote does not involve growth, i.e. a positive change in size. The elongation is dependent on F-actin and myosin but independent of microtubules. Secretion was also found to be necessary for elongation after addition of brefeldin A. Moreover, a temporal correlation between extracellular matrix secretion and elongation was observed. Ionomycin and high potassium seawater are capable of triggering the onset of elongation, suggesting a role for membrane depolarization and calcium influx in the signalling mechanism. The elongated cells are shorter in the presence of ionomycin, suggesting a role for calcium in elongation. Conclusions A model is proposed in which the fast elongation of the fertilized egg in Dictyota is accomplished by a force generated by F-actin and myosin, regulated by cytoplasmic calcium concentrations and by secretion during elongation lowering the antagonistic force. The finding of early extracellular matrix secretion, membrane depolarization and ionophore-triggered egg activation suggest significant differences in the mechanism of egg activation signalling between D. dichotoma and the oogamous brown algal model system Fucus .
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Affiliation(s)
- Kenny A Bogaert
- Department of Biology, Ghent University, Krijgslaan 281 S8, B-9000 Ghent, Belgium
| | - Tom Beeckman
- VIB-UGent Center for Plant Systems Biology, Technologiepark 927, B-9052 Ghent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 927, B-9052 Ghent, Belgium
| | - Olivier De Clerck
- Department of Biology, Ghent University, Krijgslaan 281 S8, B-9000 Ghent, Belgium
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Yu TY, Shi DQ, Jia PF, Tang J, Li HJ, Liu J, Yang WC. The Arabidopsis Receptor Kinase ZAR1 Is Required for Zygote Asymmetric Division and Its Daughter Cell Fate. PLoS Genet 2016; 12:e1005933. [PMID: 27014878 PMCID: PMC4807781 DOI: 10.1371/journal.pgen.1005933] [Citation(s) in RCA: 64] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2015] [Accepted: 02/23/2016] [Indexed: 11/19/2022] Open
Abstract
Asymmetric division of zygote is critical for pattern formation during early embryogenesis in plants and animals. It requires integration of the intrinsic and extrinsic cues prior to and/or after fertilization. How these cues are translated into developmental signals is poorly understood. Here through genetic screen for mutations affecting early embryogenesis, we identified an Arabidopsis mutant, zygotic arrest 1 (zar1), in which zygote asymmetric division and the cell fate of its daughter cells were impaired. ZAR1 encodes a member of the RLK/Pelle kinase family. We demonstrated that ZAR1 physically interacts with Calmodulin and the heterotrimeric G protein Gβ, and ZAR1 kinase is activated by their binding as well. ZAR1 is specifically expressed micropylarly in the embryo sac at eight-nucleate stage and then in central cell, egg cell and synergids in the mature embryo sac. After fertilization, ZAR1 is accumulated in zygote and endosperm. The disruption of ZAR1 and AGB1 results in short basal cell and an apical cell with basal cell fate. These data suggest that ZAR1 functions as a membrane integrator for extrinsic cues, Ca2+ signal and G protein signaling to regulate the division of zygote and the cell fate of its daughter cells in Arabidopsis.
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Affiliation(s)
- Tian-Ying Yu
- State Key Laboratory of Molecular Developmental Biology, National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China
| | - Dong-Qiao Shi
- State Key Laboratory of Molecular Developmental Biology, National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China
| | - Peng-Fei Jia
- State Key Laboratory of Molecular Developmental Biology, National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China
| | - Jun Tang
- State Key Laboratory of Molecular Developmental Biology, National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China
| | - Hong-Ju Li
- State Key Laboratory of Molecular Developmental Biology, National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China
| | - Jie Liu
- State Key Laboratory of Molecular Developmental Biology, National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China
| | - Wei-Cai Yang
- State Key Laboratory of Molecular Developmental Biology, National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China
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9
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Chen J, Gutjahr C, Bleckmann A, Dresselhaus T. Calcium signaling during reproduction and biotrophic fungal interactions in plants. MOLECULAR PLANT 2015; 8:595-611. [PMID: 25660409 DOI: 10.1016/j.molp.2015.01.023] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2014] [Revised: 01/18/2015] [Accepted: 01/20/2015] [Indexed: 05/25/2023]
Abstract
Many recent studies have indicated that cellular communications during plant reproduction, fungal invasion, and defense involve identical or similar molecular players and mechanisms. Indeed, pollen tube invasion and sperm release shares many common features with infection of plant tissue by fungi and oomycetes, as a tip-growing intruder needs to communicate with the receptive cells to gain access into a cell and tissue. Depending on the compatibility between cells, interactions may result in defense, invasion, growth support, or cell death. Plant cells stimulated by both pollen tubes and fungal hyphae secrete, for example, small cysteine-rich proteins and receptor-like kinases are activated leading to intracellular signaling events such as the production of reactive oxygen species (ROS) and the generation of calcium (Ca(2+)) transients. The ubiquitous and versatile second messenger Ca(2+) thereafter plays a central and crucial role in modulating numerous downstream signaling processes. In stimulated cells, it elicits both fast and slow cellular responses depending on the shape, frequency, amplitude, and duration of the Ca(2+) transients. The various Ca(2+) signatures are transduced into cellular information via a battery of Ca(2+)-binding proteins. In this review, we focus on Ca(2+) signaling and discuss its occurrence during plant reproduction and interactions of plant cells with biotrophic filamentous microbes. The participation of Ca(2+) in ROS signaling pathways is also discussed.
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Affiliation(s)
- Junyi Chen
- Cell Biology and Plant Biochemistry, Biochemie-Zentrum Regensburg, University of Regensburg, Universitätsstraße 31, D-93053 Regensburg, Germany
| | - Caroline Gutjahr
- Faculty of Biology Genetics, Biocenter Martinsried, University of Munich (LMU), Grosshaderner Strasse 2-4, D-82152 Martinsried, Germany
| | - Andrea Bleckmann
- Cell Biology and Plant Biochemistry, Biochemie-Zentrum Regensburg, University of Regensburg, Universitätsstraße 31, D-93053 Regensburg, Germany
| | - Thomas Dresselhaus
- Cell Biology and Plant Biochemistry, Biochemie-Zentrum Regensburg, University of Regensburg, Universitätsstraße 31, D-93053 Regensburg, Germany.
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10
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Hable WE. Rac1 signaling in the establishment of the fucoid algal body plan. FRONTIERS IN PLANT SCIENCE 2014; 5:690. [PMID: 25540648 PMCID: PMC4261725 DOI: 10.3389/fpls.2014.00690] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2014] [Accepted: 11/18/2014] [Indexed: 05/21/2023]
Abstract
Fucoid zygotes use environmental vectors, including sunlight, to initiate a growth axis a few hours after fertilization. The first division is then transversely oriented by the growth axis, producing daughter cells of distinct fates. The tip growing rhizoid cell gives rise to the holdfast, anchoring the alga to the intertidal substratum, while the opposite thallus cell mainly generates the photosynthetic and reproductive stipe and fronds. Elaboration of this simple growth axis thus establishes the basic body plan of the adult; and elucidating the mechanisms responsible for formation of the growth axis is paramount to understanding fucoid morphogenesis. Recent studies have culminated in a model whereby sunlight, and perhaps other environmental cues, activate the signaling protein Rac1 at the rhizoid pole. Here it sets in motion nucleation of a patch of actin filaments that in turn, targets ions, proteins, and cellular processes to the future growth site. At germination, Rac1 initiates morphogenesis by inducing transformation of the patch of actin filaments to a structure that delivers vesicles to the growing tip, and a few hours later orients the spindle and cytokinetic plate.
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Affiliation(s)
- Whitney E. Hable
- *Correspondence: Whitney E. Hable, Department of Biology, University of Massachusetts Dartmouth, 285 Old Westport Road, Dartmouth, MA 02747, USA e-mail:
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Farnham G, Strittmatter M, Coelho S, Cock JM, Brownlee C. Gene silencing in Fucus embryos: developmental consequences of RNAi-mediated cytoskeletal disruption. JOURNAL OF PHYCOLOGY 2013; 49:819-29. [PMID: 27007308 DOI: 10.1111/jpy.12096] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/30/2012] [Accepted: 06/02/2013] [Indexed: 05/10/2023]
Abstract
Brown algae (Phaeophyceae) are an important algal class that play a range of key ecological roles. They are often important components of rocky shore communities. A number of members of the Fucales and Ectocarpales have provided models for the study of multicellular evolution, reproductive biology and polarized development. Indeed the fucoid algae exhibit the unusual feature of inducible embryo polarization, allowing many classical studies of polarity induction. The potential of further studies of brown algae in these important areas has been increasingly hindered by the absence of tools for manipulation of gene expression that would facilitate further mechanistic analysis and gene function studies at a molecular level. The aim of this study was to establish a method that would allow the analysis of gene function through RNAi-mediated gene knockdown. We show that injection of double-stranded RNA (dsRNA) corresponding to an α-tubulin gene into Fucus serratus Linnaeus zygotes induces the loss of a large proportion of the microtubule cytoskeleton, leading to growth arrest and disruption of cell division. Injection of dsRNA targeting β-actin led to reduced rhizoid growth, enlarged cells and the failure to develop apical hair cells. The silencing effect on actin expression was maintained for 3 months. These results indicate that the Fucus embryo possesses a functional RNA interference system that can be exploited to investigate gene function during embryogenesis.
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Affiliation(s)
- Garry Farnham
- Marine Biological Association, The Laboratory, Citadel Hill, Plymouth, PL1 2PB, UK
| | - Martina Strittmatter
- The Marine Plants and Biomolecules Laboratory, CNRS, UMR 7139, UPMC University Paris 06, UMR 7139, Station Biologique de Roscoff, Place Georges Teissier, BP74, Roscoff Cedex, 29682, France
| | - Susana Coelho
- The Marine Plants and Biomolecules Laboratory, CNRS, UMR 7139, UPMC University Paris 06, UMR 7139, Station Biologique de Roscoff, Place Georges Teissier, BP74, Roscoff Cedex, 29682, France
| | - Jeremy Mark Cock
- The Marine Plants and Biomolecules Laboratory, CNRS, UMR 7139, UPMC University Paris 06, UMR 7139, Station Biologique de Roscoff, Place Georges Teissier, BP74, Roscoff Cedex, 29682, France
| | - Colin Brownlee
- Marine Biological Association, The Laboratory, Citadel Hill, Plymouth, PL1 2PB, UK
- School of Ocean and Earth Sciences, University of Southampton, National Oceanography Centre, Southampton, SO14 3ZH, UK
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12
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Tang X, Liu Y, He Y, Ma L, Sun MX. Exine dehiscing induces rape microspore polarity, which results in different daughter cell fate and fixes the apical-basal axis of the embryo. JOURNAL OF EXPERIMENTAL BOTANY 2013; 64:215-28. [PMID: 23162119 PMCID: PMC3528033 DOI: 10.1093/jxb/ers327] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
The roles of cell polarity and the first asymmetric cell division during early embryogenesis in apical-basal cell fate determination remain unclear. Previously, a novel Brassica napus microspore embryogenesis system was established, by which rape exine-dehisced microspores were induced by physical stress. Unlike traditional microspore culture, cell polarity and subsequent asymmetric division appeared in the exine-dehisced microspore, which finally developed into a typical embryo with a suspensor. Further studies indicated that polarity is critical for apical-basal cell fate determination and suspensor formation. However, the pattern of the first division was not only determined by cell polarity but was also regulated by the position of the ruptured exine. The first division could be equal or unequal, with its orientation essentially perpendicular to the polar axis. In both types of cell division, the two daughter cells could have different cell fates and give rise to an embryo with a suspensor, similar to zygotic apical-basal cell differentiation. The alignment of the two daughter cells is consistent with the orientation of the apical-basal axis of future embryonic development. Thus, the results revealed that exine dehiscing induces rape microspore polarization, and this polarity results in a different cell fate and fixes the apical-basal axis of embryogenesis, but is uncoupled from cell asymmetric division. The present study demonstrated the relationships among cell polarity, asymmetric cell division, and cell fate determination in early embryogenesis.
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Affiliation(s)
- Xingchun Tang
- Department of Cell and Developmental Biology, College of Life Science and State Key Laboratory of Hybrid Rice, Wuhan University, Wuhan 430072, China
- College of Life and Science, Hubei University, Wuhan 430062, China
| | - Yuan Liu
- Department of Cell and Developmental Biology, College of Life Science and State Key Laboratory of Hybrid Rice, Wuhan University, Wuhan 430072, China
| | - Yuqing He
- Department of Cell and Developmental Biology, College of Life Science and State Key Laboratory of Hybrid Rice, Wuhan University, Wuhan 430072, China
| | - Ligang Ma
- Department of Cell and Developmental Biology, College of Life Science and State Key Laboratory of Hybrid Rice, Wuhan University, Wuhan 430072, China
| | - Meng-xiang Sun
- Department of Cell and Developmental Biology, College of Life Science and State Key Laboratory of Hybrid Rice, Wuhan University, Wuhan 430072, China
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Abstract
Brown algae are an extremely interesting, but surprisingly poorly explored, group of organisms. They are one of only five eukaryotic lineages to have independently evolved complex multicellularity, which they express through a wide variety of morphologies ranging from uniseriate branched filaments to complex parenchymatous thalli with multiple cell types. Despite their very distinct evolutionary history, brown algae and land plants share a striking amount of developmental features. This has led to an interest in several aspects of brown algal development, including embryogenesis, polarity, cell cycle, asymmetric cell division and a putative role for plant hormone signalling. This review describes how investigations using brown algal models have helped to increase our understanding of the processes controlling early embryo development, in particular polarization, axis formation and asymmetric cell division. Additionally, the diversity of life cycles in the brown lineage and the emergence of Ectocarpus as a powerful model organism, are affording interesting insights on the molecular mechanisms underlying haploid-diploid life cycles. The use of these and other emerging brown algal models will undoubtedly add to our knowledge on the mechanisms that regulate development in multicellular photosynthetic organisms.
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Affiliation(s)
- Kenny A Bogaert
- Phycology Research Group, Department of Biology, Center for Molecular Phylogenetics and Evolution, Ghent University, Ghent, Belgium
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14
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Abstract
A range of techniques have been used to measure the concentration of cytosolic-free Ca(2+) ([Ca(2+)](cyt)) in plant cells. Fluorescent Ca(2+)-sensitive indicators have been used extensively to measure plant [Ca(2+)](cyt) and a number of techniques are available for loading these into plant cells. Here we describe a method for measuring [Ca(2+)](cyt) in the guard cells of the model plant species Commelina communis by ratio photometry and imaging techniques using the ratiometric fluorescent Ca(2+)-sensitive indicator fura-2.
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Affiliation(s)
- Martin R McAinsh
- Lancaster Environment Centre, Lancaster University, Lancaster, UK.
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Charrier B, Le Bail A, de Reviers B. Plant Proteus: brown algal morphological plasticity and underlying developmental mechanisms. TRENDS IN PLANT SCIENCE 2012; 17:468-77. [PMID: 22513108 DOI: 10.1016/j.tplants.2012.03.003] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2011] [Revised: 03/05/2012] [Accepted: 03/05/2012] [Indexed: 05/13/2023]
Abstract
Brown algae are multicellular photosynthetic marine organisms, ubiquitous on rocky intertidal shores at cold and temperate latitudes. Nevertheless, little is known about many aspects of their biology, particularly their development. Given their phylogenetic distance (1.6 billion years) from other plant organisms (land plants, and green and red algae), brown algae harbor a high, as-yet undiscovered diversity of biological mechanisms governing their development. They also show great morphological plasticity, responding to specific environmental constraints, such as sea currents, reduced light availability, grazer attacks, desiccation and UV exposure. Here, we show that brown algal morphogenesis is rather simple and flexible, and review recent genomic data on the cellular and molecular mechanisms known to date that can possibly account for this developmental strategy.
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Affiliation(s)
- Bénédicte Charrier
- Marine Biological Station, UMR7139 CNRS-UPMC 'Marine Plants and Biomolecules', Place Georges Teissier, 29682 Roscoff Cedex, France.
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16
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Dudits D, Abrahám E, Miskolczi P, Ayaydin F, Bilgin M, Horváth GV. Cell-cycle control as a target for calcium, hormonal and developmental signals: the role of phosphorylation in the retinoblastoma-centred pathway. ANNALS OF BOTANY 2011; 107:1193-202. [PMID: 21441245 PMCID: PMC3091804 DOI: 10.1093/aob/mcr038] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2010] [Revised: 10/06/2010] [Accepted: 01/07/2011] [Indexed: 05/22/2023]
Abstract
BACKGROUND During the life cycle of plants, both embryogenic and post-embryogenic growth are essentially based on cell division and cell expansion that are under the control of inherited developmental programmes modified by hormonal and environmental stimuli. Considering either stimulation or inhibition of plant growth, the key role of plant hormones in the modification of cell division activities or in the initiation of differentiation is well supported by experimental data. At the same time there is only limited insight into the molecular events that provide linkage between the regulation of cell-cycle progression and hormonal and developmental control. Studies indicate that there are several alternative ways by which hormonal signalling networks can influence cell division parameters and establish functional links between regulatory pathways of cell-cycle progression and genes and protein complexes involved in organ development. SCOPE An overview is given here of key components in plant cell division control as acceptors of hormonal and developmental signals during organ formation and growth. Selected examples are presented to highlight the potential role of Ca(2+)-signalling, the complex actions of auxin and cytokinins, regulation by transcription factors and alteration of retinoblastoma-related proteins by phosphorylation. CONCLUSIONS Auxins and abscisic acid can directly influence expression of cyclin, cyclin-dependent kinase (CDK) genes and activities of CDK complexes. D-type cyclins are primary targets for cytokinins and over-expression of CyclinD3;1 can enhance auxin responses in roots. A set of auxin-activated genes (AXR1-ARGOS-ANT) controls cell number and organ size through modification of CyclinD3;1 gene expression. The SHORT ROOT (SHR) and SCARECROW (SCR) transcriptional factors determine root patterning by activation of the CYCD6;1 gene. Over-expression of the EBP1 gene (plant homologue of the ErbB-3 epidermal growth factor receptor-binding protein) increased biomass by auxin-dependent activation of both D- and B-type cyclins. The direct involvement of auxin-binding protein (ABP1) in the entry into the cell cycle and the regulation of leaf size and morphology is based on the transcriptional control of D-cyclins and retinoblastoma-related protein (RBR) interacting with inhibitory E2FC transcriptional factor. The central role of RBRs in cell-cycle progression is well documented by a variety of experimental approaches. Their function is phosphorylation-dependent and both RBR and phospho-RBR proteins are present in interphase and mitotic phase cells. Immunolocalization studies showed the presence of phospho-RBR protein in spots of interphase nuclei or granules in mitotic prophase cells. The Ca(2+)-dependent phosphorylation events can be accomplished by the calcium-dependent, calmodulin-independent or calmodulin-like domain protein kinases (CDPKs/CPKs) phosphorylating the CDK inhibitor protein (KRP). Dephosphorylation of the phospho-RBR protein by PP2A phosphatase is regulated by a Ca(2+)-binding subunit.
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Affiliation(s)
- Dénes Dudits
- Institute of Plant Biology, Biological Research Centre, Szeged, Hungary.
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17
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De Smet I, Beeckman T. Asymmetric cell division in land plants and algae: the driving force for differentiation. Nat Rev Mol Cell Biol 2011; 12:177-88. [PMID: 21346731 DOI: 10.1038/nrm3064] [Citation(s) in RCA: 116] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Asymmetric cell division generates two cells with different fates and has an important role in plant development. It produces distinct cell types and new organs, and maintains stem cell niches. To handle the constraints of having immobile cells, plants possess numerous unique features to obtain asymmetry, such as specific regulators of intrinsic polarity. Although several components have not yet been identified, new findings, together with knowledge from different developmental systems, now allow us to take an important step towards a mechanistic overview of asymmetric cell division in plants and algae. Strikingly, several key regulators are used for different developmental processes, and common mechanisms can be recognized.
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Affiliation(s)
- Ive De Smet
- Plant and Crop Sciences Division, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, UK.
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18
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Bothwell JH, Marie D, Peters AF, Cock JM, Coelho SM. Cell cycles and endocycles in the model brown seaweed, Ectocarpus siliculosus. PLANT SIGNALING & BEHAVIOR 2010; 5:1473-5. [PMID: 21057192 PMCID: PMC3115259 DOI: 10.4161/psb.5.11.13520] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2010] [Accepted: 09/03/2010] [Indexed: 05/30/2023]
Abstract
The recent announcement of the first genome sequence of a brown macroalga, the filamentous Ectocarpus, has been accompanied by a number of companion papers in New Phytologist. In a paper which contributes to this special issue, we classified the core cell cycle components of Ectocarpus, comparing them to the previously studied cell cycle components of diatoms. We then carried out fluorescence microscopy experiments to show that the Ectocarpus cell cycle could be deregulated during early development to give endopolyploid adults. We discuss here how our findings complement recent studies on endopolyploidy in plant and algal systems.
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Affiliation(s)
- John H Bothwell
- Queen's University Belfast, School of Biological Sciences, Belfast, UK
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19
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Boursiac Y, Lee SM, Romanowsky S, Blank R, Sladek C, Chung WS, Harper JF. Disruption of the vacuolar calcium-ATPases in Arabidopsis results in the activation of a salicylic acid-dependent programmed cell death pathway. PLANT PHYSIOLOGY 2010; 154:1158-71. [PMID: 20837703 PMCID: PMC2971596 DOI: 10.1104/pp.110.159038] [Citation(s) in RCA: 92] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2010] [Accepted: 09/09/2010] [Indexed: 05/18/2023]
Abstract
Calcium (Ca(2+)) signals regulate many aspects of plant development, including a programmed cell death pathway that protects plants from pathogens (hypersensitive response). Cytosolic Ca(2+) signals result from a combined action of Ca(2+) influx through channels and Ca(2+) efflux through pumps and cotransporters. Plants utilize calmodulin-activated Ca(2+) pumps (autoinhibited Ca(2+)-ATPase [ACA]) at the plasma membrane, endoplasmic reticulum, and vacuole. Here, we show that a double knockout mutation of the vacuolar Ca(2+) pumps ACA4 and ACA11 in Arabidopsis (Arabidopsis thaliana) results in a high frequency of hypersensitive response-like lesions. The appearance of macrolesions could be suppressed by growing plants with increased levels (greater than 15 mm) of various anions, providing a method for conditional suppression. By removing plants from a conditional suppression, lesion initials were found to originate primarily in leaf mesophyll cells, as detected by aniline blue staining. Initiation and spread of lesions could also be suppressed by disrupting the production or accumulation of salicylic acid (SA), as shown by combining aca4/11 mutations with a sid 2 (for salicylic acid induction-deficient2) mutation or expression of the SA degradation enzyme NahG. This indicates that the loss of the vacuolar Ca(2+) pumps by itself does not cause a catastrophic defect in ion homeostasis but rather potentiates the activation of a SA-dependent programmed cell death pathway. Together, these results provide evidence linking the activity of the vacuolar Ca(2+) pumps to the control of a SA-dependent programmed cell death pathway in plants.
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20
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Bothwell JH, Marie D, Peters AF, Cock JM, Coelho SM. Role of endoreduplication and apomeiosis during parthenogenetic reproduction in the model brown alga Ectocarpus. THE NEW PHYTOLOGIST 2010; 188:111-21. [PMID: 20618911 DOI: 10.1111/j.1469-8137.2010.03357.x] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
• The filamentous brown alga Ectocarpus has a complex life cycle, involving alternation between independent and morphologically distinct sporophyte and gametophyte generations. In addition to this basic haploid-diploid life cycle, gametes can germinate parthenogenetically to produce parthenosporophytes. This article addresses the question of how parthenosporophytes, which are derived from a haploid progenitor cell, are able to produce meiospores in unilocular sporangia, a process that normally involves a reductive meiotic division. • We used flow cytometry, multiphoton imaging, culture studies and a bioinformatics survey of the recently sequenced Ectocarpus genome to describe its life cycle under laboratory conditions and the nuclear DNA changes which accompany key developmental transitions. • Endoreduplication occurs during the first cell cycle in about one-third of parthenosporophytes. The production of meiospores by these diploid parthenosporophytes involves a meiotic division similar to that observed in zygote-derived sporophytes. By contrast, meiospore production in parthenosporophytes that fail to endoreduplicate occurs via a nonreductive apomeiotic event. • Our results highlight Ectocarpus's reproductive and developmental plasticity and are consistent with previous work showing that its life cycle transitions are controlled by genetic mechanisms and are independent of ploidy.
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Affiliation(s)
- John H Bothwell
- Queen's University Belfast, School of Biological Sciences, 97 Lisburn Road, Belfast, BT9 7BL, UK
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21
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Hable WE, Hart PE. Signaling mechanisms in the establishment of plant and fucoid algal polarity. Mol Reprod Dev 2010; 77:751-8. [PMID: 20803733 DOI: 10.1002/mrd.21199] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2023]
Abstract
The establishment of polarity is a fundamental property of most cells. In tip-growing plant and in fucoid algal cells, polarization specifies a growth pole, the center of localized secretion of new plasma membrane and cell wall material, generating a protrusion with a dome-shaped apex. Although much progress has been made concerning the cellular machinery required to execute tip growth, less is known regarding the signaling mechanisms involved in selecting the growth site and regulating vectorial cell division and expansion. Fucoid algal zygotes use extrinsic cues to orient their growth axes and are thus well-suited for studies of de novo selection of an axis. This process has been investigated largely by both pharmacological and immuno-localization studies. In tip growing plant cells, polarity is often predetermined, as in the formation of root hairs or moss protonema branches. More focus has been on genomic and genetic studies to reveal the molecules involved in expressing a growth axis. Here we review the common roles of the cytoskeleton and signal transduction pathways in the formation of a developmental axis in fucoid algal cells and the control of tip growth in higher plant cells.
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Affiliation(s)
- Whitney E Hable
- University of Massachusetts Dartmouth, Dartmouth, Massachusetts 02747, USA.
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22
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Verret F, Wheeler G, Taylor AR, Farnham G, Brownlee C. Calcium channels in photosynthetic eukaryotes: implications for evolution of calcium-based signalling. THE NEW PHYTOLOGIST 2010; 187:23-43. [PMID: 20456068 DOI: 10.1111/j.1469-8137.2010.03271.x] [Citation(s) in RCA: 104] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
Much of our current knowledge on the mechanisms by which Ca(2+) signals are generated in photosynthetic eukaryotes comes from studies of a relatively small number of model species, particularly green plants and algae, revealing some common features and notable differences between 'plant' and 'animal' systems. Physiological studies from a broad range of algal cell types have revealed the occurrence of animal-like signalling properties, including fast action potentials and fast propagating cytosolic Ca(2+) waves. Genomic studies are beginning to reveal the widespread occurrence of conserved channel types likely to be involved in Ca(2+) signalling. However, certain widespread 'ancient' channel types appear to have been lost by certain groups, such as the embryophytes. More recent channel gene loss is also evident from comparisons of more closely related algal species. The underlying processes that have given rise to the current distributions of Ca(2+) channel types include widespread retention of ancient Ca(2+) channel genes, horizontal gene transfer (including symbiotic gene transfer and acquisition of bacterial genes), gene loss and gene expansion within taxa. The assessment of the roles of Ca(2+) channel genes in diverse physiological, developmental and life history processes represents a major challenge for future studies.
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Affiliation(s)
- Frédéric Verret
- Marine Biological Association of the UK, The Laboratory, Citadel Hill, Plymouth PL1 2PB, UK
| | - Glen Wheeler
- Marine Biological Association of the UK, The Laboratory, Citadel Hill, Plymouth PL1 2PB, UK
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth PL1 3DH, UK
| | - Alison R Taylor
- Department of Biology and Marine Biology, University of North Carolina, 601 S. College Road, Wilmington, NC 28403, USA
| | - Garry Farnham
- Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth PL1 3DH, UK
| | - Colin Brownlee
- Marine Biological Association of the UK, The Laboratory, Citadel Hill, Plymouth PL1 2PB, UK
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Roelfsema MRG, Hedrich R. Making sense out of Ca(2+) signals: their role in regulating stomatal movements. PLANT, CELL & ENVIRONMENT 2010; 33:305-321. [PMID: 19906147 DOI: 10.1111/j.1365-3040.2009.02075.x] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Plant cells maintain high Ca(2+) concentration gradients between the cytosol and the extracellular matrix, as well as intracellular compartments. During evolution, the regulatory mechanisms, maintaining low cytosolic free Ca(2+) concentrations, most likely provided the backbone for the development of Ca(2+)-dependent signalling pathways. In this review, the current understanding of molecular mechanisms involved in Ca(2+) homeostasis of plants cells is evaluated. The question is addressed to which extent the mechanisms, controlling the cytosolic Ca(2+) concentration, are linked to Ca(2+)-based signalling. A large number of environmental stimuli can evoke Ca(2+) signals, but the Ca(2+)-induced responses are likely to differ depending on the stimulus applied. Two mechanisms are put forward to explain signal specificity of Ca(2+)-dependent responses. A signal may evoke a specific Ca(2+) signature that is recognized by downstream signalling components. Alternatively, Ca(2+) signals are accompanied by Ca(2+)-independent signalling events that determine the specificity of the response. The existence of such parallel-acting pathways explains why guard cell responses to abscisic acid (ABA) can occur in the absence, as well as in the presence, of Ca(2+) signals. Future research may shed new light on the relation between parallel acting Ca(2+)-dependent and -independent events, and may provide insights in their evolutionary origin.
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Affiliation(s)
- M Rob G Roelfsema
- Molecular Plant Physiology and Biophysics, Julius-von-Sachs Institute for Biosciences, Biocenter, Würzburg University, Julius-von-Sachs-Platz 2, D-97082 Würzburg, Germany.
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24
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Peters NT, Kropf DL. Asymmetric microtubule arrays organize the endoplasmic reticulum during polarity establishment in the brown alga Silvetia compressa. Cytoskeleton (Hoboken) 2010; 67:102-11. [PMID: 20169534 DOI: 10.1002/cm.20427] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2009] [Accepted: 12/16/2009] [Indexed: 11/09/2022]
Abstract
Polarity is a fundamental characteristic of most cell types, and is crucial to early development of the brown alga Silvetia compressa. In eukaryotes the cytoskeleton plays an important role in generating cellular asymmetries. While it is known that F-actin is required for polarization and growth in most tip-growing cells, the roles of microtubules are less clear. We examined the distribution and function of microtubules in S. compressa zygotes as they polarized and initiated tip growth. Microtubules formed asymmetric arrays oriented toward the rhizoid hemisphere early in the polarization process. These arrays were spatially coupled with polar adhesive deposition, a marker of the rhizoid pole. Reorientation of the light vector during polarization led to sequential redistribution of polar axis components, with the microtubules and the polar axis reorienting nearly simultaneously, followed by cell wall loosening and then deposition of new polar adhesive. These findings suggested that microtubules may organize and target endomembrane arrays. We therefore examined the distribution of the endoplasmic reticulum during polarization and found it colocalized with microtubules and became targeted toward the rhizoid pole as microtubule asymmetry was generated. Endoplasmic reticulum association with microtubules remained fully intact following pharmacological disruption of F-actin, whereas microtubule disruption led to aggregation of the endoplasmic reticulum around the nucleus. We propose that brown algae utilize microtubules for organization of the endoplasmic reticulum and migration of exocytotic components to the rhizoid cortex, and present a model for polarity establishment to account for these new findings.
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Affiliation(s)
- Nick T Peters
- Department of Biology, University of Utah, Salt Lake City, USA.
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