Achieving abiotic stress tolerance in plants through antioxidative defense mechanisms

An A-6 subgroup member of DREB gene family positively regulates cold stress tolerance by modulating an antioxidant defense system in transgenic potato

Cold stress adversely influences the growth, development, geographic distribution, and yield of plants. The dehydration-responsive element binding (DREB) transcription factors are central to improving plant's ability to endure cold stress. In this work, the expression pattern of the StDREB30 (A-6) gene was analyzed in response to cold stress in transgenic potato. We provide evidence emphasizing the significance of the StDREB30 under low-temperature stress (4°C) and investigate the potential physiological, molecular and biochemical processes involved. StDREB30 expression levels were quickly elevated upon the cold exposure. Additionally, transgenic potato plants exhibited upregulation of randomly selected downstream genes (StNAC, StDREB1, StDREB2, StSAP, StGT3, and StDHN), improved photosynthetic parameters including coefficient of photochemical quenching (qL), and maximum yield of PSII (Fv'/Fm'), better stomatal performance, increased proline accumulation, decreased malondialdehyde content, electrolyte leakage, and reduced accumulation of hydrogen peroxide, and superoxide when exposed to cold stress. Moreover, StDREB30 improved reactive oxygen scavenging capabilities by stimulating the production of antioxidants such as superoxide dismutase, peroxidase, catalase, and ascorbate peroxidase. Our results propose that StDREB30 serves as a positive regulator in promoting cold tolerance. To our knowledge, no report has been published previously on the study of the StDREB30 (A-6) gene under cold stress in transgenic potatoes.

Molecular mechanisms underlying abiotic stress responses in buckwheat

Plants have endured evolutionary changes for hundreds of years under the impact of increasing abiotic and biotic stress due to increasing human activities over the past centuries. Scientists have been working to understand the molecular mechanisms of plant responses to severe environmental stress, as plants have complex molecular arrangements to respond and adapt to abiotic stress, including drought, cold, and heat stress. Buckwheat (Fagopyrum spp.) is a resilient pseudocereal known for its nutritional value and adaptability to various environmental conditions, making it an essential crop in sustainable agriculture. It is particularly noted for its gluten-free nature and high-quality protein content, which benefit those with gluten sensitivities. However, recent studies revealed that buckwheat cultivation faces significant challenges from abiotic stressors such as drought, salinity, temperature extremes, and heavy metal toxicity, which can adversely affect its growth and yield. We have acknowledged key genes and factors in regulating complex responses and tolerance of plants in response to abiotic stresses. We compiled new data about diverse mechanisms by which different Fagopyrum species manage abiotic stress, encompassing physiological, biochemical, and molecular adaptations. As global food production demands rise, effective management strategies for these stress factors are increasingly critical for optimising buckwheat production and ensuring food security in a changing climate.

Transformative strategies for saline soil restoration: Harnessing halotolerant microorganisms and advanced technologies

Soil salinity is a critical global challenge that severely impairs crop productivity and soil health by disrupting water uptake, nutrient acquisition, and ionic balance in plants, thereby posing a significant threat to food security. This review underscores innovative strategies to mitigate salinity stress, focusing on the pivotal role of halotolerant microorganisms and their synergistic interactions with plants. Halotolerant microorganisms enhance plant resilience through diverse mechanisms under salinity, including exopolysaccharide production, sodium sequestration, and phytohormone regulation. It improves ionic balance, nutrient uptake, and root development, facilitated by osmoregulatory and genetic adaptations. In this discussion, we explored emerging technologies, including genome editing (e.g., CRISPR-Cas9), synthetic biology, and advanced omics-based tools such as metagenomics and metatranscriptomics. These cutting-edge approaches offer profound insights into microbial diversity and their functional adaptations to saline environments. By leveraging these technologies, it is possible to design targeted bioremediation strategies through the customization of microbial functionalities to address specific environmental challenges effectively. Advanced methodologies, such as microbial volatile organic compounds (mVOCs), nanotechnology, and stress-tolerant microbial consortia, significantly enhance plant stress tolerance and facilitate soil restoration. Moreover, integrating digital technologies, including machine learning and artificial intelligence (AI), optimizes bioremediation processes by providing precise, scalable, and adaptable solutions tailored to diverse agricultural ecosystems. The synergistic application of halotolerant microbe-mediated approaches with advanced biotechnological and digital innovations presents a transformative strategy for saline soil restoration. Future research should focus on harmonizing these technologies and methodologies to maximize plant-microbe interactions and establish resilient, sustainable agricultural systems.

Copper and Nitrogen Codoped CDs for Alleviating the Damage of Reactive Oxygen Species for Cucumber Seedlings under Salt Stress

Dramatic changes in climate and soil environments have made growing conditions for crops more challenging. These crops are subject to a range of abiotic stresses in different environments, which can lead to significant yield losses, resulting in economic and environmental damages. Herein, we report a straightforward one-pot hydrothermal method for creating carbon dots codoped with copper and nitrogen (Cu,N-CDs). Under salt stress conditions, Cu,N-CDs demonstrate the ability to alleviate oxidative damage in cucumber seedlings by modulating antioxidant defense mechanisms and scavenging reactive oxygen species (ROS). Cucumber seedling biomass accumulation is greatly enhanced by Cu,N-CDs treatment in the presence of a ROS burst, leading to a notable rise in the dry weight, plant height, and fresh weight. Cu,N-CDs mitigate oxidative damage in cucumber seedlings by activating antioxidant defense systems, specifically enhancing the activities of superoxide dismutase (+34.08%), catalase (+28.11%), peroxidase (+17.54%), and ascorbate peroxidase (+31.54%) to scavenge ROS. Furthermore, Cu,N-CDs can enhance the levels of nonenzymatic elements within the antioxidant system, such as polyphenols (+23.60%), flavonoids (+15.43%), and carotenoid content (+51.73%), which strengthen the scavenging ability of cucumber seedlings against ROS. Meanwhile, Cu,N-CDs can induce a significant increase of soluble sugar and soluble protein content by 27.27 and 32.58%, respectively, which improves the osmotic pressure as well as stress tolerance of plants. Additionally, the accumulation of biomass was aided by the increase in the photosynthetic pigment content that Cu,N-CDs treatment can produce.

In Vitro Culture of Aegle marmelos Against Media Composition Stress: Molecular Identification, Media, and Enzyme Optimization for Higher Growth Yields

Aegle marmelos, known for its spiky appearance, is a versatile tree found worldwide. In the Indian medical tradition, this therapeutic tree is utilized to treat various ailments. It is commonly propagated through seeds, although they have a limited lifespan and are susceptible to insect damage. Due to the variability of seed offspring, standardized varieties are not readily available. Molecular identification was performed for the plant species to be as a fingerprint identification based on genomic basic. Hence, this study manipulated the in vitro multiplication for enhancing Aegle marmelos traits through variation in media type and composition. In phase one of the experiment, successful micropropagation has been easily achieved with shoot tip culture on two growth in vitro media: Murashige and Skoog (MS) medium and woody plant medium (WPM) with different concentrations (one-fourth, one-half, three-fourths, and full power media) with two sucrose concentration 20 and 30 g/L. The growth parameters measured indicated a heightened response to both MS and WPM media, each with its distinct composition. The genetic variation via intersimple sequence repeat (ISSR) molecular marker in the first phase was 35.5%. In phase two, the hormonal treatment was applied for the best media choice from Phase 1. During the second phase of multiplication and rooting stages with phytohormones, the optimal treatments were chosen to maximize yields. In the multiplication stage, the most favorable conditions, as determined by morphological parameters, were achieved with full MS medium supplemented with 30 g sucrose, 0.1 mg/L Kin, and 0.75 mg/L BAP. In contrast, for the rooting stage, the optimal treatment consisted of one-fourth MS medium supplemented with 15 g sucrose, 0.5 mg/L Kin, 0.1 g/L activated charcoal, and 15 mg/L IBA. Physiological parameters exhibited variability, with each metabolite displaying distinct optimal conditions. Catalase plays a crucial role in decomposing hydrogen peroxide to protect cells, tissues, and organs. This research effectively enhanced the in vitro micropropagation of Aegle marmelos by determining the most efficacious medium formulations and hormonal treatments for shoot multiplication and roots, while also illustrating the influence of WPM on catalase enzyme activity enhancement.

Differential resilience of chickpea's reproductive organs to cold stress across developmental stages: insights into antioxidant strategies for enhanced fertility

Chickpea is highly sensitive to cold stress during its reproductive stages, leading to significant reductions in potential pod formation due to decreased reproductive success. This study aimed to investigate the specific responses of anthers and ovules to cold stress, explore the role of oxidative stress and antioxidant mechanisms, and understand the relationship between oxidative stress and reproductive function to enhance our understanding of chickpea responses to cold stress. Chickpea seeds of contrasting genotypes-cold-tolerant (ICC 17258, ICC 16349) and cold-sensitive (ICC 15567, GPF 2)-were sown outdoors in early November under optimal conditions (25.5/15.4°C mean day/night temperatures). At 50 days after sowing, plants were subjected to 13/7°C cold stress (12 h light/dark in walk-in growth chambers. Cold stress significantly increased membrane damage and reduced cellular viability in anthers and ovules, particularly in cold-sensitive (CS) genotypes. Oxidative damage was more pronounced in anthers, particularly at anthesis (stage 2), as indicated by elevated malondialdehyde and hydrogen peroxide levels. Cold-tolerant (CT) genotypes exhibited increased antioxidant activity under stress, especially at pre-anthesis (stage 1), followed by declines at later stage, although responses varied by genotype. Anthers exhibited higher overall antioxidants activity than ovules, while ovules demonstrated notably high catalase activity. Among the antioxidants studied, ascorbate peroxidase and glutathione reductase were most prominent in the CT genotype, along with higher levels of ascorbate (AsA) and glutathione (GSH), highlighting the critical role of the AsA-GSH cycle in conferring cold tolerance to chickpea. Exogenous supplementation with 1 mM ascorbate (AsA) and glutathione (GSH) significantly stimulated pollen germination in cold-stressed plants under in vitro conditions, with a greater effect observed in CS genotypes. Furthermore, antioxidant activity strongly correlated with key reproductive traits such as pollen germination and ovule viability. This study revealed that the anthers and ovules exhibited distinct responses to cold stress, with significant genotypic differences across key reproductive stages. These insights provide a deeper understanding of cold tolerance mechanisms in chickpea and provide vital clues for breeding strategies to enhance resilience and reproductive success under cold stress.

Restoring wheat productivity and nutrient balance under cadmium stress through reducing toxicity, metal uptake, and oxidative damage using selenium nanoparticles

Cadmium (Cd) contamination in soil poses a significant environmental threat, reducing crop yields and compromising food safety. This study investigates the potential of selenium nanoparticles (Se-NPs) synthesized using wheat extract to mitigate Cd toxicity, reduce Cd uptake and mobility, and recover grain nutrient composition in wheat (Triticum aestivum L.). A pot experiment was conducted following a completely randomized design (CRD) with three replications. Treatments included control, four Se-NPs concentrations (10, 25, 50, and 100 ppm), four Cd stress levels (25, 50, 75, and 100 ppm), and their combined interactions. Various physiological, biochemical, and agronomic parameters were analyzed to assess the mitigation potential of Se-NPs against Cd toxicity in wheat. Se-NPs (36.77 nm) were characterized using FTIR, confirming functional groups for stabilization, XRD verifying crystallinity and size via the Scherrer Equation, SEM revealing spherical morphology, and EDX confirming selenium as the predominant element with minor trace elements. Under 50 ppm Cd stress, Se-NPs at 25 ppm reduced days to anthesis by 8.16 % and mitigated a 45.13 % decrease in plant height. Grain yield, which declined by 90.86 % under Cd stress, was restored by 90.86 % with 10 ppm Se-NPs. Additionally, Se-NPs improved thousand kernel weight by 32.71 %, counteracting a 25.92 % reduction due to Cd stress. Antioxidant enzyme activities, including SOD and CAT, increased by up to 333.79 % in roots with Se-NP treatment, while oxidative stress markers decreased by 28 %. Moreover, Se-NPs effectively mitigated Cd uptake and reduced its mobility within the plant. Grain protein content improved by 16.89 %, and carbohydrate levels were maintained at 4.61 % despite Cd exposure. These findings indicate that Se-NPs enhance crop resilience, supporting sustainable food production in Cd-contaminated environments.

Vitamin E in Plants: Biosynthesis Pathways, Biofortification Strategies, and Regulatory Dynamics

Vitamin E, mainly encompassing tocopherols and tocotrienols, is an essential antioxidant synthesized in the photosynthetic tissues of plants and photosynthetic bacteria, as well as in certain algae, yet dietary intake often falls short of recommended levels. Although synthetic supplements are available, natural vitamin E demonstrates higher bioavailability, creating a need for biofortification strategies to enrich crops with this nutrient. Recent advances in molecular genetics have elucidated key components of the vitamin E biosynthesis pathway, uncovering complex regulatory mechanisms and expanding opportunities for genetic enhancement. This review integrates current advances in vitamin E biosynthesis, novel gene discovery, diverse biofortification strategies, and insights into transporter-mediated regulation to enhance tocopherol and tocotrienol levels in staple crops. By aligning these advances, this review provides a framework to drive innovative biofortification efforts, positioning vitamin E enrichment as a sustainable solution for improved human and animal health.

A novel stress-inducible dCas9 system for solanaceous plants

Conditional manipulation of gene expression is essential in plant biology, yet a simple stimuli-based inducible system for regulating any plant gene is lacking. Here, we present an innovative stress-inducible CRISPR/dCas9-based gene-regulatory toolkit tailored for intentional gene regulation in solanaceous plants. We have translationally fused the transmembrane domain of a tomato membrane-bound NAC transcription factor with dCas9 to utilize the reversible-tethering-based activation mechanism. This system sequesters dCas9 to the plasma membrane under normal conditions and allows membrane detachment in response to heat induction and NLS-mediated nuclear transfer, enabling stress-inducible gene regulation. Transient assays with tomato codon-optimized dCas9-assisted inducible CRISPR activation and interference systems confirmed their superior ability on transcriptional control, rapid induction, and reversibility after stimulus withdrawal in solanaceous plants. The transformative potential of the toolkit was exemplified by enhancing tomato immunity against bacterial speck disease under elevated temperatures by precisely regulating crucial salicylic acid signalling components, SlCBP60g and SlSARD1. Additionally, it was instrumental in engineering heat-stress tolerance in tomato plants through multiplex activation of heat-responsive transcription factors, SlNAC2 and SlHSFA6b. These findings demonstrate the unprecedented temporal control offered by this novel stress-inducible toolkit over gene-expression dynamics, paving the way for favourable manipulation of complex traits in environmentally-challenged crops.

Cell-Type-Specific Heat-Induced Changes in the Proteomes of Pollen Mother Cells and Microspores Provide New Insights into Tomato Pollen Production Under Elevated Temperature

BACKGROUND

Tomatoes are self-pollinating plants, and successful fruit set depends on the production of functional pollen within the same flower. Our previous studies have shown that the 'Black Vernissage' tomato variety exhibits greater resilience to heat stress in terms of pollen productivity compared to the 'Micro-Tom' variety. Pollen productivity is determined by meiotic activity during microsporogenesis and the development of free microspores during gametogenesis. This study focused on identifying heat stress (HS)-induced proteomes in pollen mother cells (PMCs) and microspores.

METHODS

Tomato plants were grown under two temperature conditions: 26 °C (non-heat-treated control) and 37 °C (heat-treated). Homogeneous cell samples of meiotic PMCs (prior to the tetrad stage) and free microspores were collected using laser capture microdissection (LCM). The heat-induced proteomes were identified using tandem mass tag (TMT)-quantitative proteomics analysis.

RESULTS

The enrichment of the meiotic cell cycle in PMCs and the pre-mitotic process in free microspores confirmed the correlation between proteome expression and developmental stage. Under HS, PMCs in both tomato varieties were enriched with heat shock proteins (HSPs). However, the 'Black Vernissage' variety exhibited a greater diversity of HSP species and a higher level of enrichment compared to the 'Micro-Tom' variety. Additionally, several proteins involved in gene expression and protein translation were downregulated in PMCs and microspores of both varieties. In the PMC proteomes, the relative abundance of proteins showed no significant differences between the two varieties under normal conditions, with very few exceptions. However, HS induced significant differential expression both within and between the varieties. More importantly, these heat-induced differentially abundant proteins (DAPs) in PMCs are directly involved in meiotic cell division, including the meiosis-specific protein ASY3 (Solyc01g079080), the cell division protein kinase 2 (Solyc11g070140), COP9 signalosome complex subunit 1 (Solyc01g091650), the kinetochore protein ndc80 (Solyc01g104570), MORC family CW-type zinc finger 3 (Solyc02g084700), and several HSPs that function in protecting the fidelity of the meiotic processes, including the DNAJ chaperone (Solyc04g009770, Solyc05g055160), chaperone protein htpG (Solyc04g081570), and class I and class II HSPs. In the microspores, most of the HS-induced DAPs were consistently observed across both varieties, with only a few proteins showing significant differences between them under heat stress. These HS-induced DAPs include proteases, antioxidant proteins, and proteins related to cell wall remodeling and the generation of pollen exine.

CONCLUSIONS

HS induced more dynamic proteomic changes in meiotic PMCs compared to microspores, and the inter-varietal differences in the PMC proteomes align with the effects of HS on pollen productivity observed in the two varieties. This research highlights the importance of the cell-type-specific proteomics approach in identifying the molecular mechanisms that are critical for the pollen developmental process under elevated temperature conditions.

Tissue-specific transcriptomic analysis reveals the molecular mechanisms responsive to cold stress in Poa crymophila, and development of EST-SSR markers linked to cold tolerance candidate genes

BACKGROUND

Poa crymophila is a perennial, cold-tolerant, native grass species, widely distributed in the Qinghai-Tibet Plateau. However, the tissue-specific regulatory mechanisms and key regulatory genes underlying its cold tolerance remain poorly characterized. Therefore, in this study, based on the screening and evaluation of cold tolerance of four Poa species, the cold tolerance mechanism of P. crymophila's roots, stems, and leaves and its cold tolerance candidate genes were investigated through physiological and transcriptomic analyses.

RESULTS

Results of the present study suggested that the cold tolerance of the four Poa species was in the following order: P. crymophila > P. botryoides > P. pratensis var. anceps > P. pratensis. Cold stress significantly changed the physiological characteristics of roots, stems, and leaves of P. crymophila in this study. In addition, the transcriptome results showed that 4434, 8793, and 14,942 differentially expressed genes (DEGs) were identified in roots, stems, and leaves, respectively; however, 464 DEGs were commonly identified in these three tissues. KEGG enrichment analysis showed that these DEGs were mainly enriched in the phenylpropanoid biosynthesis pathway (roots), photosynthesis pathway (stems and leaves), circadian rhythm-plant pathway (stems and leaves), starch and sucrose metabolism pathway (roots, stems, and leaves), and galactose metabolism pathway (roots, stems, and leaves). A total of 392 candidate genes involved in Ca2+ signaling, ROS scavenging system, hormones, circadian clock, photosynthesis, and transcription factors (TFs) were identified in P. crymophila. Weighted gene co-expression network analysis (WGCNA) identified nine hub genes that may be involved in P. crymophila cold response. A total of 200 candidate gene-based EST-SSRs were developed and characterized. Twenty-nine polymorphic EST-SSRs primers were finally used to study genetic diversity of 40 individuals from four Poa species with different cold tolerance characteristics. UPGMA cluster and STRUCTURE analysis showed that the 40 Poa individuals were clustered into three major groups, individual plant with similar cold tolerance tended to group together. Notably, markers P37 (PcGA2ox3) and P148 (PcERF013) could distinguish P. crymophila from P. pratensis var. anceps, P. pratensis, and P. botryoides.

CONCLUSIONS

This study provides new insights into the molecular mechanisms underlying the cold tolerance of P. crymophila, and also lays a foundation for molecular marker-assisted selection for cold tolerance improvement in Poa species.

Exogenous γ-aminobutyric acid mitigates drought-induced impairments in Thymus daenensis Celak by regulating physiological traits, antioxidant enzymes and essential oil constituents

Drought stress is one of the most significant environmental challenges, leading to various changes in the physiological processes of plants. Gamma-aminobutyric acid (GABA) is an essential biomolecule that plays a critical role in regulating growth and stress signaling. The current study aims to investigate the effects of GABA on antioxidant enzyme activity and the essential oil composition of Thymus daenensis Celak under different levels of water deficit stress. We examined three different levels of soil moisture (90%, 60%, and 30% of field capacity) alongside three GABA foliar treatments (0 mM, 25 mM, 50 mM, and 75 mM). The results showed that applying 25 mM GABA under severe stress conditions (at 30% of field capacity) significantly increased the activity levels of ascorbate peroxidase, guaiacol peroxidase, and superoxide dismutase enzymes by 95.5%, 78.45%, and 38%, respectively. Additionally, applying GABA at various levels during different water stress treatments led to significant improvements in the chlorophyll, carotenoid, and proline content in leaf tissues. Specifically, the application of 25, 50, and 75 mM GABA enhanced the proline content in T. daenensis by 53.9%, 26.8%, and 11%, respectively, compared to the control group (non-application of GABA). Essential oil analysis revealed the following ranges: thymol was present in the range of 38.07-45.18%, cymene in the range of 5.13-14.10%, caryophyllene in the range of 4.3-23.01%, and cineole in the range of 2-4.15%. The highest amount of thymol was obtained in the absence of GABA at 30% field capacity, while the greatest amount of cymene was also observed without GABA at 90% field capacity. Additionally, the maximum concentration of caryophyllene was found when 50 mM GABA was applied at 90% field capacity, and the maximum level of cineole was detected with 75 mM GABA at 90% field capacity. In conclusion, the exogenous application of GABA demonstrated favorable efficacy, particularly at a concentration of 25 mM. This treatment resulted in a significant enhancement of the plant's defense mechanisms and created favorable conditions that notably impacted the quality of the essential oil produced by T. daenensis.

Sex and salt stress response - physiological and biochemical aspects of hydroponic culture of dioecious Rumex thyrsiflorus Fingerh

This study investigates the sex-specific physiological and biochemical responses to salt stress in male and female Rumex thyrsiflorus plants under hydroponic culture conditions. In vitro regenerated plants were exposed to different sodium chloride (NaCl) concentrations (0, 43, and 86 mM), and the resulting changes in morphology, photosynthetic performance, and biochemical profiles were analyzed. Salt stress resulted in significant morphological adaptations, including reduced leaf area and closed stomata, particularly in the male plants, indicating adaptive strategies to minimize water loss and ion toxicity. Photosynthetic efficiency, especially the photochemical performance of photosystem II, decreased under elevated NaCl levels, with a marked reduction observed at 86 mM. Biochemical analyses revealed remarkable responses, including increased enzymatic antioxidant activities and the accumulation of free proline, a known compatible osmolyte, as well as branched-chain amino acids, soluble proteins, and carbohydrates. These shifts in metabolite profiles varied by sex, with male plants showing a greater increase in compounds such as proline, γ-aminobutyric acid, methionine, and the osmoprotectant sucrose, highlighting sex-specific patterns of metabolic adaptation. Females showed higher chlorophyll retention and greater resistance to oxidative damage, suggesting a range of different adaptive strategies. The study highlights the importance of identifying sex-specific stress responses in R. thyrsiflorus, which has implications for breeding programmes aiming to improve crop resilience. These results expand our understanding of plant stress biology and provide valuable insights for further research into how dioecious plants respond to environmental challenges.

Recent Advances of Carbon Dots: Synthesis, Plants Applications, Prospects, and Challenges

Nanomaterials and nanotechnology have garnered significant attention in the realm of agricultural production. Carbon dots (CDs), as a class of nanomaterials, play a crucial role in the field of plant growth due to their excellent properties. This review aims to summarize recent achievements on CDs, focusing on their methods of preparation and applications in plants systems. The effects of CDs on seed germination, growth, photosynthesis, nutritional quality, and stress resistance were studied. It has been demonstrated that CDs can promote seed germination and growth, as well as improve photosynthetic efficiency, ultimately leading to increase plants yield. The nutritional quality of the plants treated with CDs was significantly improved. Specifically, the levels of essential mineral elements, vitamins, amino acids, and other constituents that are beneficial to human health increased notably. Additionally, CDs show positive effects on augmenting plant resistance against environmental stresses, such as drought conditions, heavy metal toxicity, and high salinity. Finally, the prospects and challenges of the application of CDs in plant systems are also discussed, which provide a scientific basis for the future application of CDs in agricultural production.

Hydrogel alleviates the stressful effect drought in Schinus terebinthifolia and helps with post-stress recovery

The use of hydrogel has been a viable and promising management strategy for forest seedlings. We aimed to evaluate the effect of hydrogel on Schinus terebinthifolia Raddi seedlings subjected to water deficit and after normal water supply post-stress. The water management evaluated were: i) Control: plants irrigated daily, ii) Drought: water deficit (irrigation suspension), and iii) Drought + hydrogel: addition of the polymer when transplanting seedlings. Assessments were carried out in three periods: (a) P1 - photosynthesis (A) was monitored until plants in one of the drought water regimes presented values ​​close to 1.0 μmol CO2 m-2 s-1, (b) Recovery (REC) - after P1, seedlings were subjected to resumption of irrigation similar to control, until plants previously subjected to drought without or with hydrogel showed to A ≥ 70% at control. In Post-Rec (c) - at end of REC, the seedlings received + 90 days of irrigation. The quantum photochemical potential efficiency in photosystem II and absorbed energy conversion remained higher with hydrogel in P1. The hydrogel alleviates the stressful effect drought on physiology of seedlings, mitigating the reduction of photosynthesis in P1 and contributes for recovery of growth characteristics, biomass and quality of seedlings in the Post-Rec. S. terebinthifolia seedlings showed phenotypic plasticity with potential of resilience for their recovery.

Multi-omics analysis reveals key regulatory defense pathways in Ruppia sinensis in response to water salinity fluctuations

Seagrasses maintain cellular water balance by regulating ion concentrations and accumulating organic osmolytes, enabling them to survive in the fluctuating salinity of intertidal environments. However, the molecular mechanisms underlying seagrass responses to salinity changes remain relatively understudied. To address this, we conducted a multi-omics analysis of Ruppia sinensis under low, moderate, and high salinity conditions to uncover the mechanisms behind its adaptation to salinity fluctuations. Our research revealed that the transition from low to high salinity significantly altered the physiological characteristics of R. sinensis. Simultaneously, the species enhanced its ability to cope with and adapt to salinity fluctuations by increasing antioxidant enzyme activity. Integration of multi-omics data further indicated that under high salinity conditions, R. sinensis synthesizes more flavonoids to bolster its adaptive capacity. Additionally, the phenylpropanoid metabolic pathway appears to play a crucial role in the response of R. sinensis to changes in water salinity.

Exploring Sustainable Fertilization Strategies Involving Biochar, Compost, and Inorganic Nitrogen: Impact on Nutrient Uptake, Yield, Phytochemical Accumulation, and Antioxidant Responses in Turnips

The effect of fertilization strategies involving biochar, compost, and inorganic N on growth and phytochemical accumulation in turnips was studied in a greenhouse pot experiment. The experiment was carried out with six fertilizer treatments: unfertilized soil (US), compost (120 g/pot) + biochar (20 g/pot) (C + B), compost (120 g/pot) + 0.5 g N/pot (C + 0.5 N), biochar (20 g/pot) + 0.5 g N/pot (B + 0.5 N), compost (120 g/pot) + biochar (20 g/pot) + 0.5 g N/pot (C + B + 0.5 N), and inorganic fertilization (pre-plant mineral fertilizer + 1 g N/pot (PF + N)). Compost, biochar, and pre-plant mineral fertilizer were incorporated into the top 10 cm of soil, while inorganic N was applied weekly in equal amounts. The application of biochar with C + 0.5 N, compared to C + 0.5 N alone, reduced plant Ca and Mg uptake but did not affect dry biomass production. Using compost + 0.5 N, with or without biochar, proved to be a viable and sustainable strategy, achieving high dry biomass yields similar to inorganic fertilization but with lower inorganic N and no addition of the other inorganic nutrients. The biomass increase was due to enhanced nutrient uptake, resulting from the synergy between compost and the application of a reduced amount of N. The co-applications reduced nitrate levels in both shoots and roots and left the soil more fertile than soil fertilized with inorganic fertilization. Fertilization strategies differently affected the accumulation of ascorbic acid, total phenols, polyphenol oxidase, and proline in roots and shoots. Inorganic fertilization enhanced ascorbic acid and total phenols in shoots, while the combination of compost, biochar, and 0.5 N was more effective in roots, suggesting that fertilization strategies should be tailored to tissue-specific goals.

Puccinia triticina and Salicylic Acid Stimulate Resistance Responses in Triticum aestivum Against Diuraphis noxia Infestation

Wheat plants encounter both biotic and abiotic pressure in their surroundings. Among the biotic stress factors, the Russian wheat aphid (RWA: Diuraphis noxia Kurdjumov) decreases grain yield and quality. The current RWA control strategies, including resistance breeding and the application of aphicides, are outpaced and potentially environmentally harmful. Alternatively, priming can stimulate defence responses to RWA infestation. This study investigated the priming potential of two priming agents, avirulent Puccinia triticina (Pt) isolates and salicylic acid (SA), against RWA infestation. The priming effect of Pt isolates and SA in reducing RWA-induced leaf damage and increased antioxidant activities is an indication of defence responses. Selected South African wheat cultivars and Lesotho landraces, grown under greenhouse conditions, were inoculated with Pt isolates (UVPt13: avirulent, UVPt26: virulent) and treated with SA at the seedling or booting stages. The leaf damage rating score was used for phenotyping. The antioxidant-mediated defence responses were evaluated in three selected cultivars for further priming investigation. Our results revealed that the priming agents significantly reduced the leaf damage in most cultivars at both growth stages, and UVPt13 and SA priming significantly (p ≤ 0.05) increased superoxide dismutase, peroxidase, and ascorbate peroxidase activities. However, catalase activity exhibited a more pronounced decline in plants treated with the UVPt13 isolate. The Pt isolate priming was more efficient than the SA application. However, it is crucial to investigate the potential of effectors from the avirulent Pt isolate to prime wheat plants for resistance against RWA infestation. This could contribute to developing strategies to enhance crop protection and relieve pest pressure in wheat production.

The Combined Toxic Effects of Polystyrene Microplastics and Arsenate on Lettuce Under Hydroponic Conditions

The combined pollution of microplastics (MPs) and arsenic (As) has gradually been recognized as a global environmental problem, which calls for detailed investigation of the synergistic toxic effects of MPs and As on plants and their mechanisms. Therefore, the interaction between polystyrene microplastics (PS-MPs) and arsenate (AsO43-) (in the following text, it is abbreviated as As(V)) and its toxic effects on lettuce were investigated in this study. Firstly, chemisorption was identified as the main mechanism between PS-MPs and As(V) by the analysis of adsorption kinetics, adsorption thermodynamics, and Fourier transform infrared spectroscopy (FTIR). At the same time, the addition of As(V) promoted the penetration of PS-MPs through the continuous endodermal region of the Casparis strip. Furthermore, compared with the CK group, it was found that the co-addition of As(V) exacerbated the lowering effect of PS-MPs on the pH value of the rhizosphere environment and the inhibitory effect on root growth. In the P20V10 group, the pH decreased by 33.0%. Compared to the CK group, P20, P20V1, and P20V10 decreased the chlorophyll content by 68.45% (16 SPAD units), 71.37% (17.73 SPAD units), and 61.74% (15.36 SPAD units) and the root length by 19.31% (4.18 cm), 50.72% (10.98 cm), and 47.90% (10.37 cm) in lettuce. P5V10 and P20V10 increased CAT content by 153.54% (33.22 U·(mgprol)-1) and 182.68% ((38.2 U·(mgprol)-1)), Ca by 31.27% and 37.68%, and Zn by 41.85% and 41.85%, but the presence of As(V) reduced Na by 22.85% (P5V1) and 49.95% (P5V10). The co-exposure significantly affected the physiological and biochemical indicators as well as the nutritional quality of the lettuce. Finally, the metabolomic analysis of the lettuce leaves showed that combined pollution with PS-MPs and As(V) affected the metabolic pathways of the tricarboxylic acid cycle (TCA cycle), sulfur metabolism, and pyruvate metabolism. This study provides data for pollution management measures for co-exposure to PS-MPs and As(V).

Calcium Enhances the Effectiveness of Melatonin in Improving Nutritional Properties of Soybean Sprouts and Germination Under Salt and Cadmium Stress

Salinity and cadmium exposure to agrarian land lowers crop yield and imposes toxicity in the food chain, ultimately affecting sustainable agriculture. Melatonin (Mel) and calcium (Ca) have been reported as potent regulators of plant growth and stress resistance. Based on this scenario, this study investigated the sole and combined effects of Mel and Ca on improving the antioxidant properties, mineral content, germination of sprout, and stress tolerance of soybean seedlings under salt and cadmium (Cd) stress. Optimal doses of 20 µM Mel and 1 mM Ca were identified to enhance sprout quality and seed germination. Treatments with Mel > 20 µM inhibited germination, while the combination of Mel (20 µM) and Ca (1 mM) significantly improved germination, mineral content (Ca, P, K), and antioxidant properties, including DPPH(2,2-Diphenyl-1-picrylhydrazyl) activity, polyphenols, flavonoids, and superoxide dismutase (SOD) activity. However, melatonin > 50 µM could completely cease the sprouting, whereas a Ca concentration of up to 10 mM was observed to be normal in sprouting. Additionally, this combination reduced malondialdehyde (MDA) levels and enhanced the proline, indicating decreased oxidative stress in soybean seedlings under stress conditions. Among various treatments tested, the Mel-Ca combination was most effective in enhancing sprout biomass, antioxidant activity, and seed viability under Salt+Cd stress. These findings underscore the synergistic role of Ca in optimizing melatonin pretreatment for stress mitigation in soybean seeds and also address the precaution for a possible negative impact of melatonin effects.

Enhancing Tolerance to Combined Heat and Drought Stress in Cool-Season Grain Legumes: Mechanisms, Genetic Insights, and Future Directions

The increasing frequency of concurrent heat and drought stress poses a significant challenge to agricultural productivity, particularly for cool-season grain legumes, including broad bean (Vicia Faba L.), lupin (Lupinus spp.), lentil (Lens culinaris Medik), chickpea (Cicer arietinum L.), grasspea (Lathyrus sativus L.), pea (Pisum sativum L.), and common vetch (Vicia sativa L.). These legumes play a vital role in sustainable agricultural systems due to their nitrogen-fixing ability and high nutritional value. This review synthesizes current knowledge of the impacts and tolerance mechanisms associated with combined heat and drought stresses in these crops. We evaluate physiological and biochemical responses to combined heat and drought stress, focusing on their detrimental effects on growth, development, and yield. Key genetic and molecular mechanisms, such as the roles of osmolytes, antioxidants, and stress-responsive genes, are explored. We also discuss the intricate interplay between heat and drought stress signaling pathways, including the involvement of Ca2+ ions, reactive oxygen species, transcription factor DREB2A, and the endoplasmic reticulum in mediating stress responses. This comprehensive analysis offers new insights into developing resilient legume varieties to enhance agricultural sustainability under climate change. Future research should prioritize integrating omics technologies to unravel plant responses to combined abiotic stresses.

Enantioselective Assessment of Etoxazole Enantiomers in Earthworms (Eisenia fetida): Bioaccumulation, Degradation, Transcriptome, and Oxidative Stress

This study systemically investigated the enantioselective bioaccumulation and degradation of etoxazole (ETZ) in earthworms along with the transcriptome and oxidative stress responses to ETZ enantiomer exposure. Based on the M-shaped bioaccumulation trends for ETZ enantiomers, R-ETZ was found to be preferentially bioaccumulated in earthworms. Sublethal toxicity analysis showed that S-ETZ induced greater changes in protein content, malondialdehyde content, detoxifying metabolic enzyme activity, and oxidative stress in earthworms, compared to those induced by R-ETZ. Integrated biomarker response analysis suggested that S-ETZ induced higher sublethal toxicity in earthworms than R-ETZ. Finally, transcriptomic analysis indicated that 845 and 314 genes were differentially expressed after R-ETZ and S-ETZ exposure, respectively, when compared to the nonexposed control group. Enrichment analysis indicated that these differentially expressed genes were primarily enriched in the digestion and absorption of proteins, lysosome, peroxisome, and peroxisome proliferator-activated receptor signaling pathways. These results suggest that earthworms exhibit distinct enantioselective responses to S-ETZ and R-ETZ. This study elucidates the enantioselective bioaccumulation, degradation, transcriptome, and oxidative stress characteristics of ETZ enantiomers in earthworms at the enantiomer level, offering a theoretical foundation to improve the risk assessment of ETZ in the soil-earthworm microsomes.

Interactions between SDBS and Hydrilla verticillata - epiphytic biofilm in wetland receiving STPs effluents: Nutrients removal and epiphytic microbial assembly

The fate and effects of sodium dodecyl benzene sulfonate (SDBS) in sewage treatment plants effluents on nutrients and submerged macrophytes are far from clear in wetlands. This study conducted a 24-day experiment to investigate changes in nutrients and epiphytic biofilm of Hydrilla verticillata in wetlands receiving effluents with 0.5, 2 and 5 mg L-1 SDBS. The decrease of SDBS in overlying water followed pseudo-first-order kinetic equation, with over 80 % of SDBS removal achieved. 2 and 5 mg L-1 SDBS decreased nutrient removal efficiency, induced oxidative stress response and damaged cells of H. verticillata. SDBS altered bacterial and eukaryotic community diversity. 0.5 mg L-1 SDBS can promote carbon fixation and methane oxidation of microorganisms. Network analysis revealed that 0.5 mg L-1 SDBS decreased the stability of epiphytic ecosystems. Mantel tests indicated significant influences of SDBS, temperature, and total nitrogen on epiphytic microbial communities.

Decoding the role of durum wheat ascorbate peroxidase TdAPX7B-2 in abiotic stress response

APX proteins are H2O2-scavenging enzymes induced during oxidative stress. In the first part of this study, we provided an extensive knowledge on the APX family of Triticum durum, TdAPX and their related TdAPX-R, via the genome wide analysis. The outcomes showed that these proteins are clustered into four major subgroups. Furthermore, the exon-intron structure and the synteny analyses revealed that during evolution the genes TdAPX and TdAPX-R are relatively conserved. Besides, during their evolution, these genes underwent purifying selection pressure and were duplicated in segmental. In parallel, the analysis of the conserved motifs and the multiple sequence alignment demonstrated that the residues involved in the active sites, heme- and cations-binding are conserved only in TdAPX proteins. Following the RNA-seq data and the regulatory elements analyses, we focused in the second part of this study on the functional characterization of TdAPX7B-2. The qRT-PCR data showed the upregulation of TdAPX7B-2 essentially in leaves of durum wheat exposed to salt, cold, drought, metals and ABA treatments. The tolerance phenotype of the TdAPX7B-2-expressing Arabidopsis lines to salt, direct-induced oxidative stress and heavy metals was manifested by the development of root system, proline accumulation and induction of the antioxidant CAT, SOD and POD enzymes to maintain the non-toxic H2O2 levels. Likewise, the response to salt stress and direct-oxidative stress of the transgenic lines was accompanied mainly by the induction of AtNCED3, AtRD29A/B and AtERD1.

Mitigation of Salt Stress in Lactuca sativa L. var. Gentile Rossa Using Microalgae as Priming Agents

Using renewable biomass in agriculture, particularly microalgae as a biostimulant, offers economic and environmental sustainability benefits by reducing costs, improving nutrient cycling, and enhancing water use efficiency. Microalgae contain bioactive compounds that boost crop tolerance to environmental stresses, including salinity. Saline soils, characterized by elevated sodium chloride (NaCl) levels, negatively impact many crops, resulting in low productivity and high remediation costs. Therefore, this study evaluates the biostimulant properties of a microalgae-based commercial preparation (MR) on lettuce (Lactuca sativa L.) plants grown hydroponically and exposed to saline stress. The extract was chemically characterized through elemental analysis, lipid composition (gas chromatography with flame ionization detector-GC-FID), the determination of functional groups (Fourier Transformed Infrared-FT-IR), structure (1H,13C Nuclear Magnetic Resonance-NMR), with their hormone-like activity also assessed. Lettuce plants were treated with or without the microalgae blend, in combination with 0, 50 mM, or 100 mM NaCl. The contents of nutrients, soluble proteins, chlorophylls, and phenols, as well as the lipid peroxidation, antioxidants and root traits of lettuce plants, were estimated. The microalgae applied to salt-stressed plants resulted in a significant increase in biomass, protein, and chlorophyll contents. Additionally, significant effects on the secondary metabolism and mitigation of salinity stress were observed in terms of increased phenol content and the activity of antioxidant enzymes, as well as decreased lipid peroxidation. The potassium (K+) content was increased significantly in plants treated with 100 mM NaCl after addition of microalgae, while the content of sodium (Na+) was concurrently reduced. In conclusion, our results demonstrate that using microalgae can be a potent approach for improving the cultivation of Lactuca sativa L. under saline stress conditions.

The causal link between nitrogen structure and physiological processes of Ulva prolifera as the causative species of green tides

Harmful algal blooms (HABs) increase with eutrophication depending on the nutrient structure (availability and ratios), but an unequivocal causal link between these factors is rarely established. Here, we provide support for the causal link between the nitrogen structure and physiological processes of Ulva prolifera as the causative species of Yellow Sea green tides (YSGTs) using in situ and laboratory experiments. The results showed that the components of nitrogen nutrients in seawater exhibited significant spatiotemporal variation. The concentration of NO3--N showed a notable decreasing trend from south to north. Sufficient dissolved inorganic nitrogen (DIN) induced increases in thalli nitrate reductase (NR) and glutamine synthetase (GS) activities. This could accelerate thalli uptake of nitrogen nutrients. The glutamate dehydrogenase (GDH) activity was significantly upregulated with the increasing proportion of dissolved organic nitrogen (DON) in seawater. The change in nitrogen structure regulated the activity of NR during the long-distance floating migration of the YSGTs. And the activity of NR could modulate the nitric oxide (NO) content in the thalli. NO was used as a signal molecule to enhance the antioxidant defense system of thalli. The efficient antioxidant system in the thalli could reduce oxidative stress and effectively maintain high photosynthetic activity. The findings deepen our understanding of the relationship between nitrogen structures and key biological processes in macroalgae. This study also suggest that NO can enhance key biological processes in U. prolifera under varying nitrogen structures.

Polyamine Seed Priming: A Way to Enhance Stress Tolerance in Plants

Polyamines (PAs), such as putrescine, spermine, and spermidine, are bioactive molecules that play a vital role in plant responses to stresses. Although they are frequently applied to achieve higher levels of stress tolerance in plants, their function in seed biology is still not fully understood. PAs have been described in only a limited number of studies as seed priming agents, but most of the data report only the physiological and biochemical PA effects, and only a few reports concern the molecular mechanisms. In this review, we summarized PA seed priming effects on germination, seedling establishment, and young plant response to abiotic stresses, and tried to draw a general scheme of PA action during early developmental plant stages.

Integrating gene expression analysis and ecophysiological responses to water deficit in leaves of tomato plants

Soil water deficit (WD) significantly impacts plant survival and crop yields. Many gaps remain in our understanding of the synergistic coordination between molecular and ecophysiological responses delaying substantial drought-induced effects on plant growth. To investigate this synergism in tomato leaves, we combined molecular, ecophysiological, and anatomical methods to examine gene expression patterns and physio-anatomical characteristics during a progressing WD experiment. Four sampling points were selected for transcriptomic analysis based on the key ecophysiological responses of the tomato leaves: 4 and 5 days after WD (d-WD), corresponding to 10% and 90% decrease in leaf stomatal conductance; 8 d-WD, the leaf wilting point; and 10 d-WD, when air embolism blocks 12% of the leaf xylem water transport. At 4 d-WD, upregulated genes were mostly linked to ABA-independent responses, with larger-scale ABA-dependent responses occurring at 5 d-WD. At 8 d-WD, we observed an upregulation of heat shock transcription factors, and two days later (10 d-WD), we found a strong upregulation of oxidative stress transcription factors. Finally, we found that young leaves present a stronger dehydration tolerance than mature leaves at the same drought intensity level, presumably because young leaves upregulate genes related to increased callose deposition resulting in limiting water loss to the phloem, and related to increased cell rigidity by modifying cell wall structures. This combined dataset will serve as a framework for future studies that aim to obtain a more holistic WD plant response at the molecular, ecophysiological and anatomical level.

Deciphering the ABA and GA biosynthesis approach of Bacillus pumilus, mechanistic approach, explaining the role of metabolic region as an aid in improving the stress tolerance

Bacillus pumilus plays an essential role in agricultural applications as a beneficial microbe and for sustainable agriculture production. However, the underlying mechanisms of B. pumilus strains remain unclear as to how they are beneficial for plants as stress tolerant and growth promoters. Bacillus pumilus was isolated from the rhizosphere soil of Artemisia vulgaris. NGS (next-generation sequencing) was performed for the strain to gain new insights into the molecular mechanisms underlying plant-microbial interactions. NGS revealed 3,910 genes, 3294 genes with protein-coding, and 11 functional genomic regions related to diverse agronomic traits including stress tolerance. We identified the two possible phytohormone biosynthesis approaches from metabolic regions1(terpense→diterpense→betacarotene→xanthoxin→ABA)2(terpense→diterpense→geranyl diphosphate →C20 →GA). Several gene clusters related to the biosynthesis of phytohormones, stress tolerance, and agricultural diversification were predicted. The genome provides insights into the possible mechanisms of this bacterium for stress tolerance and its future applications. The genomic organization of B. pumilus revealed several hallmarks of its plant growth promotion and pathogen suppression activities. Our results provide detailed genomic information for the strain and reveal its potential stress tolerance mechanisms, laying the foundation for developing effective stress tolerance strategies against abiotic stress.

Synthetic communities derived from the core endophytic microbiome of hyperaccumulators and their role in cadmium phytoremediation

BACKGROUND

Although numerous endophytic bacteria have been isolated and characterized from cadmium (Cd) hyperaccumulators, the contribution and potential application of the core endophytic microbiomes on facilitating phytoremediation were still lack of intensive recognition. Therefore, a 2-year field sampling in different location were firstly conducted to identify the unique core microbiome in Cd hyperaccumulators, among which the representative cultivable bacteria of different genera were then selected to construct synthetic communities (SynComs). Finally, the effects and mechanisms of the optimized SynCom in regulating Cd accumulation in different ecotypes of Sedum alfredii were studied to declare the potential application of the bacterial agents based on core microbiome.

RESULTS

Through an innovative network analysis workflow, 97 core bacterial taxa unique to hyperaccumulator Sedum was identified based on a 2-year field 16S rRNA sequencing data. A SynCom comprising 13 selected strains belonging to 6 different genera was then constructed. Under the combined selection pressure of the plant and Cd contamination, Alcaligenes sp. exhibited antagonistic relationships with other genera and plant Cd concentration. Five representative strains of the other five genera were further conducted genome resequencing and developed six SynComs, whose effects on Cd phytoremediation were compared with single strains by hydroponic experiments. The results showed that SynCom-NS comprising four strains (including Leifsonia shinshuensis, Novosphingobium lindaniclasticum, Ochrobactrum anthropi, and Pseudomonas izuensis) had the greatest potential to enhance Cd phytoremediation. After inoculation with SynCom-NS, genes related to Cd transport, antioxidative defense, and phytohormone signaling pathways were significantly upregulated in both ecotypes of S. alfredii, so as to promote plant growth, Cd uptake, and translocation.

CONCLUSION

In this study, we designed an innovative network analysis workflow to identify the core endophytic microbiome in hyperaccumulator. Based on the cultivable core bacteria, an optimized SynCom-NS was constructed and verified to have great potential in enhancing phytoremediation. This work not only provided a framework for identifying core microbiomes associated with specific features but also paved the way for the construction of functional synthetic communities derived from core microbiomes to develop high efficient agricultural agents. Video Abstract.

Potentiation of Catalase-Mediated Plant Thermotolerance by N-Terminal Attachment of Solubilizing/Thermostabilizing Fusion Partners

Catalase (CAT) plays a crucial role in plant responses to environmental stresses and maintaining redox homeostasis. However, its putative heat lability might compromise its activity and function, thus restricting plant thermotolerance. Herein, we verified Arabidopsis CAT3 was of poor thermostability that was then engineered by fusion expression in Escherichia coli. We found that our selected fusion partners, three hyperacidic mini-peptides and the short rubredoxin from hyperthermophile Pyrococcus furiosus, were commonly effectual to enhance the solubility and thermostability of CAT3 and enlarge its improvement on heat tolerance in E. coli and yeast. Most importantly, this finding was also achievable in plants. Fusion expression could magnify CAT3-mediated thermotolerance in tobacco. Under heat stress, transgenic lines expressing CAT3 fusions generally outperformed native CAT3 which in turn surpassed wild-type tobacco, in terms of seed germination, seedling survival, plant recovery growth, protection of chlorophyll and membrane lipids, elimination of H2O2, as well as mitigation of cell damage in leaves and roots. Moreover, we revealed that the introduced CAT3 or its fusions seemed solely responsible for the enhanced thermotolerance in tobacco. Prospectively, this fusion expression strategy would be applicable to other crucial plant proteins of intrinsic heat instability and thus provide an alternative biotechnological route for ameliorating plant heat tolerance.

Histone demethylase JMJ713 interaction with JMJ708 modulating H3K36me2, enhances rice heat tolerance through promoting hydrogen peroxide scavenging

The Earth is currently undergoing rapid warming cause of the accumulation in greenhouse gas emissions into the atmosphere and the consequent rise in global temperatures. High temperatures can bring the effects on rice development and growth and thereby decrease rice yield. In this study, we have identified that both JMJ713 and JMJ708 possess distinct histone demethylase activities. Specifically, JMJ713 modulates the levels of H3K36me2 while JMJ708 alters H3K9me3. Additionally, we have observed an interaction between JMJ713 and JMJ708, which collectively modify the level of H3K36me2. Furthermore, our findings demonstrate that JMJ713 plays an essential role to heat stress responses in rice (Oryza sativa). The overexpression of JMJ713 enhances heat tolerance in rice, whereas JMJ713 RNA interference rice lines exhibit increased sensitivity to heat. Further investigations revealed that overexpression of JMJ713 activated catalase (CAT) and peroxidase (POD) activities by mitigating excessive accumulation of reactive oxygen species (ROS) caused by heat stress. Interestingly, the setting rates of JMJ713 RNA interference lines decreased in comparing to wild-type, indicating that JMJ713 might play a crucial role in the rice seed development stage as well. Collectively, this study not only highlights JMJ713 is involved in heat stress responses but also provides insights into the conserved Fe(Ⅱ) and α-ketoglutarate (KG) binding residues are crucial for the demethylase activity of JMJ713, as well as JMJ713 interacts with JMJ708 to jointly regulate the levels of H3K36me2.

Comparative Analysis of Two Soybean Cultivars Revealed Tolerance Mechanisms Underlying Soybean Adaptation to Flooding

Flooding stress poses a significant challenge to soybean cultivation, impacting plant growth, development, and ultimately yield. In this study, we investigated the responses of two distinct soybean cultivars: flooding-tolerant Nanxiadou 38 (ND38) and flooding-sensitive Nanxiadou 45 (ND45). To achieve this, healthy seedlings were cultivated with the water surface consistently maintained at 5 cm above the soil surface. Our objective was to elucidate the physiological and molecular adaptations of the two cultivars. Under flooding stress, seedlings of both cultivars exhibited significant dwarfing and a notable decrease in root length. While there were no significant differences in the dry weight of aboveground shoots, the dry weight of underground shoots in ND38 was strikingly decreased following flooding. Additionally, total chlorophyll content decreased significantly following flooding stress, indicating impaired photosynthetic performance of the cultivars. Moreover, malondialdehyde (MDA) levels increased significantly after flooding, particularly in the ND45 cultivar, suggesting heightened oxidative stress. Expression analysis of methylation and demethylation genes indicated that MET1 and DME play crucial roles in response to flooding stress in soybeans. Meanwhile, analysis of the hemoglobin family (GLBs), aquaporin family (AQPs), glycolytic pathway-related genes, and NAC transcription factor-related genes identified GLB1-1 and GLB1-2, GLB2-2, PIP2-6, PIP2-7, TIP2-2, TIP4-1, TIP5-1, Gm02G222400 (fructose-bisphosphate aldolase), Gm19G017200 (glucose-6-phosphate isomerase), and Gm04G213900 (alcohol dehydrogenase 1) as key contributors to flooding tolerance in both soybean cultivars. These findings provide crucial insights into the physiological and molecular mechanisms underlying flooding tolerance in soybeans, which could guide future molecular breeding strategies for the development of flooding-tolerant soybean cultivars.

Pathological Characterization and Management of Lasiodiplodia theobromae, a Hemibiotroph with an Interkingdom Host Range

Heart rot disease, caused by Lasiodiplodia theobromae, is destructive for date palms and other woody plants. The disease was reported in several oases in Egypt, and the pathogen was found in association with infected trees suffering dieback and rachis blight. Seven phylogenetically distinct fungal isolates were selected, and their pathogenicity was confirmed on date palms. The isolates exhibited variable degrees of virulence on inoculated leaves, which confirms the variation. We examined the antifungal effect of microbial bioagents and plant extracts on heart rot disease. The isolates of Trichoderma spp. gave moderate reduction of the pathogen's linear growth (40 to 60%), whereas their exudates were ultimately ineffective. Bacillus spp. isolates, except for B. megaterium, were more effective against spore germination, giving 80 to 90% reduction on average. Among the examined plant extracts, garlic sap gave 98.67% reduction of linear growth followed by artemisia (15.5%) and camphor (24.8%). The extraction methods greatly influenced the antifungal efficiency of each extract because exposure to organic solvents significantly decreased the efficiency of all extracts, whereas hot water extraction negatively affected garlic sap only. Successful bioagents and plant extracts were further assayed for the suppression of heart rot disease on date palms. Both T. album and T. harzianum gave comparable degrees of suppression as by commercial fungicides. In addition, treatment before or during pathogen inoculation was the most effective because it significantly enhanced the expression of defense-related enzymes. Our findings suggest biopesticides possess a dual role in disease suppression and defense boosters for date palms suffering heart rot disease.

An insight into heat stress response and adaptive mechanism in cotton

The growing worldwide population is driving up demand for cotton fibers, but production is hampered by unpredictable temperature rises caused by shifting climatic conditions. Numerous research based on breeding and genomics have been conducted to increase the production of cotton in environments with high and low-temperature stress. High temperature (HT) is a major environmental stressor with global consequences, influencing several aspects of cotton plant growth and metabolism. Heat stress-induced physiological and biochemical changes are research topics, and molecular techniques are used to improve cotton plants' heat tolerance. To preserve internal balance, heat stress activates various stress-responsive processes, including repairing damaged proteins and membranes, through various molecular networks. Recent research has investigated the diverse reactions of cotton cultivars to temperature stress, indicating that cotton plant adaptation mechanisms include the accumulation of sugars, proline, phenolics, flavonoids, and heat shock proteins. To overcome the obstacles caused by heat stress, it is crucial to develop and choose heat-tolerant cotton cultivars. Food security and sustainable agriculture depend on the application of genetic, agronomic, and, biotechnological methods to lessen the impacts of heat stress on cotton crops. Cotton producers and the textile industry both benefit from increased heat tolerance. Future studies should examine the developmental responses of cotton at different growth stages, emphasize the significance of breeding heat-tolerant cultivars, and assess the biochemical, physiological, and molecular pathways involved in seed germination under high temperatures. In a nutshell, a concentrated effort is required to raise cotton's heat tolerance due to the rising global temperatures and the rise in the frequency of extreme weather occurrences. Furthermore, emerging advances in sequencing technologies have made major progress toward successfully se sequencing the complex cotton genome.

Cerium Oxide Nanoparticles (CeO2 NPs) Enhance Salt Tolerance in Spearmint (Mentha spicata L.) by Boosting the Antioxidant System and Increasing Essential Oil Composition

Salinity represents a considerable environmental risk, exerting deleterious effects on horticultural crops. Nanotechnology has recently emerged as a promising avenue for enhancing plant tolerance to abiotic stress. Among nanoparticles, cerium oxide nanoparticles (CeO2 NPs) have been demonstrated to mitigate certain stress effects, including salinity. In the present study, the impact of CeO2 NPs (0, 25, and 100 mg L-1) on various morphological traits, photosynthetic pigments, biochemical parameters, and the essential oil profile of spearmint plants under moderate (50 mM NaCl) and severe (100 mM NaCl) salinity stress conditions was examined. As expected, salinity reduced morphological parameters, including plant height, number of leaves, fresh and dry weight of leaves and shoots, as well as photosynthetic pigments, in comparison to control. Conversely, it led to an increase in the content of proline, total phenols, malondialdehyde (MDA), hydrogen peroxide (H2O2), and antioxidant enzyme activities. In terms of CeO2 NP applications, they improved the salinity tolerance of spearmint plants by increasing chlorophyll and carotenoid content, enhancing antioxidant enzyme activities, and lowering MDA and H2O2 levels. However, CeO2 NPs at 100 mg L-1 had adverse effects on certain physiological parameters, highlighting the need for careful consideration of the applied concentration of CeO2 NPs. Considering the response of essential oil compounds, combination of salinity stress and CeO2 treatments led to an increase in the concentrations of L-menthone, pulegone, and 1,8-cineole, which are the predominant compounds in spearmint essential oil. In summary, foliar application of CeO2 NPs strengthened the resilience of spearmint plants against salinity stress, offering new insights into the potential use of CeO2 NP treatments to enhance crop stress tolerance.

Waveform Optimization for the In Vitro Detection of Caffeic Acid by Fast-Scan Cyclic Voltammetry

Caffeic acid is a polyphenol of critical importance in plants, involved in a variety of physiological processes including lignin formation, cellular growth, stress response, and external signaling. This small molecule also acts as a powerful antioxidant and thus has therapeutic potential for a variety of health conditions. Traditional methods of detecting caffeic acid lack appropriate temporal resolution to monitor real time concentration changes on a subsecond time scale with nM detection limits. Here we report on the first usage of fast-scan cyclic voltammetry with carbon fiber microelectrodes for the detection of caffeic acid. Through the use of flow injection analysis, the optimal waveform for its detection under acidic conditions at a scan rate of 400 V/s was determined to be sawtooth-shaped, from 0 to 1.4 to -0.4 to 0 V. Signal was linear with concentration up to 1 μM with a sensitivity of 44.8 ± 1.3 nA/μM and a detection limit of 2.3 ± 0.2 nM. The stability of its detection was exceptional, with an average of 0.96% relative standard deviation across 32 consecutive injections. This waveform was also successful in detecting other catechol-based plant antioxidants including 5-chlorogenic acid, oleuropein, rosmarinic acid, chicoric acid, and caffeic acid phenethyl ester. Finally, we show the successful use of fast-scan cyclic voltammetry in monitoring the degradation of caffeic acid by polyphenol oxidase on a subsecond time scale via a novel modification of a Ramsson cell. This work demonstrates that fast-scan cyclic voltammetry can be used to successfully monitor real-time dynamic changes in the concentrations of catechol-containing plant polyphenols.

Physiological and biochemical responses in a cadmium accumulator of traditional Chinese medicine Ligusticum sinense cv. Chuanxiong under cadmium condition

Ligusticum sinense cv. Chuanxiong (L. Chuanxiong), one of the widely used traditional Chinese medicines (TCM), is currently facing the problem of excessive cadmium (Cd) content. This problem has significantly affected the quality and safety of L. Chuanxiong and become a vital factor restricting its clinical application and international trade development. Currently, to solve the problem of excessive Cd, it is essential to research the response mechanisms of L. Chuanxiong to Cd stress. However, there are few reports on its physiological and biochemical responses under Cd stress. In this study, we conducted the hydroponic experiment under 25 μM Cd stress, based on the Cd content of the genuine producing areas soil. The results showed that 25 μM Cd stress not only had no significant inhibitory effect on the growth of L. Chuanxiong seedlings but also significantly increased the chlorophyll a content (11.79%) and root activity (51.82%) compared with that of the control, which might be a hormesis effect. Further results showed that the absorption and assimilation of NH4+ increased in seedlings under 25 μM Cd stress, which was associated with high photosynthetic pigments. Here, we initially hypothesized and confirmed that Cd exceedance in the root system of L. Chuanxiong was due to the thickening of the root cell wall, changes in the content of the cell wall components, and chelation of Cd by GSH. There was an increase in cell wall thickness (57.64 %) and a significant increase in cellulose (25.48%) content of roots under 25 μM Cd stress. In addition, L. Chuanxiong reduced oxidative stress caused by 25 μM Cd stress mainly through the GSH/GSSG cycle. Among them, GSH-Px (48.26%) and GR (42.64%) activities were significantly increased, thereby maintaining a high GSH/GSSG ratio. This study preliminarily reveals the response of L. Chuanxiong to Cd stress and the mechanism of Cd enrichment. It provides a theoretical basis for solving the problem of Cd excessive in L. Chuanxiong.

Effect of Paenibacillus favisporus CHP14 inoculation on selenium accumulation and tolerance of Pakchoi (Brassica chinensis L.) under exogenous selenite treatments

The effects of Paenibacillus favisporus CHP14 inoculation on selenium (Se) accumulation and Se tolerance of Pakchoi were studied by a pot experiment conducted in greenhouse. The results revealed that the growth traits such as plant height, root length, and biomass were significantly elevated during CHP14 treatment at 0 ∼ 8.0 mg·kg-1 Se(IV) levels. CHP14-inoculated plants accumulated more Se in root and shoot, which were 24.1%∼57.3% and 7.5%∼50.9% higher than those of non-inoculated plants. The contents of leaf nitrogen (N), phosphorus (P), magnesium (Mg), and iron (Fe), as well as the ratio of indoleacetic acid and abscisic acid contents (IAA/ABA) were increased by CHP14 inoculation, and positively associated with photosynthetic pigment contents (p < 0.05). At ≥ 4.0 mg·kg-1 Se(IV) levels, superoxide dismutase, peroxidase, and glutathione peroxidase activities of Pakchoi roots were increased with CHP14 inoculation, by 9.9%∼17.1%, 28.4%∼40.7%, and 7.4%∼15.3%, respectively. Moreover, CHP14 inoculation enhanced ascorbate-glutathione (AsA-GSH) metabolism in roots by upregulating the related enzymes activities and antioxidant contents under excess Se(IV) stress. These findings suggest that CHP14 is beneficial to improve plant growth and enhance Se(IV) resistance of Pakchoi, and can be exploited as potential inoculants for phytoremediation process in Se contaminated soil.

Nuclear integration of MYB36 and APX-1 genes impart heat tolerance in wheat

Elevated temperatures during grain filling stage, exceeding the optimal range by 3-4 °C, not only results in a substantial yield reduction in wheat by 10-50% but activates disease and insect infestation. In this research, we introduced heat-tolerant MYB36 and APX-1 gene cassettes into wheat, employing an efficient Agrobacterium mediated transformation protocol, demonstrating higher transformation efficiency. The study encompassed the assembly of MYB36 and APX-1 gene cassettes, and confirmation of gene products in Agrobacterium, followed by the transformation of the MYB36 and APX-1 genes into wheat explants. We were able to select transgenic plant with various combinations. The transgenic plants with APX-1 gene alone produced medium sized grain and spike whereas with both APX-1 and MYB36 genes expressed individually under SPS and rd29a promoter respectively showed good tolerance to heat at 32oC at grain filling/milking stage and produced relatively bold grains. While non-transgenic plants grains were wrinkled with thin spike showing susceptibility to heat. This research contributes to the broader scientific understanding of plant stress responses and the combined effectiveness of MYB36 and APX-1 genes in crop improvement without disturbing normal nutritional values. The gene integration can serve as a valuable tool in breeding programs aimed at developing heat-tolerant wheat varieties. These findings also advance our comprehension of the functions of heat-induced genes and lay the foundation for selecting optimal candidates for in-depth functional studies of heat-responsive MYB36 and APX-1 genes in wheat.

Overexpression of PagLOL1b improves drought tolerance through increasing water use efficiency and reactive oxygen species scavenging in transgenic poplar

LESION SIMULATING DISEASE1 (LSD) family genes play a key role in plant response to abiotic and biotic stress. However, their functions in the resistance of tree to drought stress are still largely not clear. Here, five LSD family genes in poplar genome were identified. Phylogenetic and collinear relationship analysis showed that they belonged to LSD, LSD-one-like 1 (LOL1) and LSD-one-like 2 (LOL2) subfamilies, and experienced two segmental duplication events. PagLSDs were highly conserved in gene structure, and all PagLSDs contained at least two LSD domains. Expression pattern and cis-acting element analyses showed that PagLSDs were widely expressed in different organs, significantly induced by polyethylene glycol, and possessed a great number of plant growth, development, plant hormones, and biotic and abiotic stress elements in their promoter regions. Further physiological experiments with transgenic poplar plants revealed that overexpression of PagLOL1b significantly enhanced the drought tolerance of transgenic plants. The improved drought tolerance was closely associated with the significant increase in stomatal closure, water use efficiency, antioxidant enzyme gene expression and antioxidant enzyme activity in transgenic plants. The results in our study imply that PagLOL1b has great potential in the engineering of new tree varieties resistant to drought stress.

Transcriptome and Metabolome Analyses Reveal the Molecular Mechanisms of Albizia odoratissima's Response to Drought Stress

Albizia odoratissima is a deciduous tree species belonging to the family Leguminosae. It is widely distributed in the southern subtropical and tropical areas of China and has important ecological and economic value. The growth and metabolic processes of A. odoratissima are affected by drought stress, but the molecular mechanisms remain unknown. Therefore, this study investigated the physicochemical properties, gene expression, and metabolites of A. odoratissima seedlings under drought stress. The results show that, in leaves of A. odoratissima seedlings, drought stress reduced the moisture content, chlorophyll content, photosynthetic efficiency, superoxide dismutase (SOD) activity, and gibberellin (GA) and indoleacetic acid (IAA) contents while increasing the catalase (CAT) and peroxidase (POD) activities and malondialdehyde (MDA), proline, soluble sugar, and soluble protein contents. Within the CK5 (Day 5 of control group) vs. T5 (Day 5 of drought treatment), CK10 vs. T10, CK15 vs. T15, and CK20 vs. T20 groups (CK: control group; T: drought treatment), a total of 676 differentially expressed genes (DEGs) were upregulated and 518 DEGs were downregulated, and a total of 228 and 143 differential accumulation metabolites (DAMs) were identified in the CK10 vs. T10 and CK20 vs. T20 groups. These were mainly involved in the amino acid and alkaloid metabolism pathways in the leaves of the A. odoratissima seedlings. In the amino acid and alkaloid biosynthesis pathways, the relative expression levels of the AoproA (Aod04G002740, ORTHODONTIC APPLIANCE), AoOAT (Aod07G015970, ORNITHINE-OXO-ACID TRANSAMINASE), and AoAOC3 (Aod12G005010/08G003360/05G023920/08G003000/08G003010, AMINE OXIDASE COPPER CONTAINING 3) genes increased, which concurrently promoted the accumulation of arginine, proline, piperine, cadaverine, and lysine. Furthermore, some key transcription factors in the response to drought were identified in the leaves using the weighted gene co-expression network analyses (WGCNA) method. These findings reveal that A. odoratissima seedlings respond to drought stress by improving the capacities of the antioxidant system and secondary metabolism.

Azolla pinnata as a phytoremediator: improves germination, growth and yield of maize irrigated with Ni-polluted water

The removal of pollutants from the environment has become a global demand. The current study aimed to relieve the Ni toxicity effect on the germination, growth, and grain yield of maize by using Azolla pinnata as a phytoremediator. Azolla-treated and untreated nickel solutions [0 (control), 24, 70, 140 and 190 ppm] were applied for germination and pot experiments. Electron microscope examination cleared the Ni accumulation in Azolla's cell vacuole and its adsorption on the cell wall. The inhibition of the hydrolytic enzyme activity reduces maize germination; maximal inhibition was 57.1% at 190 ppm of Ni compared to the control (100%). During vegetative growth, Ni stimulated the generation of H2O2 (0.387 mM g-1 F Wt at 190 ppm of Ni), which induced maximal lipid peroxidation (3.913 µMDA g-1 F Wt) and ion leakage (74.456%) compared to control. Chlorophyll content and carbon fixation also showed significant reductions at all Ni concentrations; at 190 ppm, they showed maximum reductions of 56.2 and 63%, respectively. However, detoxification enzymes' activity such as catalase and antioxidant substances (phenolics) increased. The highest concentration of Ni (190 ppm) had the most effect on constraining yield, reaching zero for the weight of 100 grains at 190 ppm of Ni. Azolla-treated Ni solutions amended all determinant parameters, indicating a high percentage of changes in hydrolytic enzyme activity (125.2%) during germination, chlorophyll content (77.6%) and photosynthetic rate (120.1%). Growth measurements, carbon fixation, and yield components showed a positive association. Thus, we recommended using Azolla as a cost-effective and eco-friendly strategy to recover Ni-polluted water.

Evaluation of growth, physiological response, and drought resistance of different flue-cured tobacco varieties under drought stress

Background

In recent years, more severe droughts have occurred frequently in many parts of the world, drought stress is the primary abiotic stress factor restricting the growth and quality of flue-cured tobacco. Therefore, screening dryland cultivation-compatible flue-cured tobacco varieties will help reduce the negative impact of drought.

Methods

Tobacco varieties were selected: Qinyan 96 (Q96), Zhongyan 101 (Z101), Yunyan 87 (Y87), and Yunyan 116 (Y116). A pot experiment was conducted with four water supply gradients: sufficient, mild stress, moderate stress, and severe stress. The aim was to analyze inter-varietal differences in agronomic traits, photosynthetic traits, reactive oxygen species (ROS) metabolism, and antioxidant enzyme system under drought stress. Additionally, the drought resistance of four flue-cured tobacco varieties was evaluated using principal component analysis and membership function analysis.

Results

The results showed that drought intensification inhibited seedling growth and development across all varieties, with Q96 showing the least decrease and Y116 the greatest. With the increasing degree of drought stress, photosynthetic rates (Pn), transpiration rate (Tr), and stomatal conduction (Gs) have shown gradually decreasing trends, while substomatal cavity CO2 concentration (Ci) showed a growing trend. Severe drought corresponded with lower chlorophyll content and decreased the maximal photochemical efficiency (Fv/Fm), photosystem II (PSII), and photochemical quenching coefficient (qP) in all varieties, while steady-state non-photochemical quenching (NPQ) increased. Increased drought stress led to significantly higher reactive oxygen species (ROS) and malondialdehyde (MDA) content accumulation in tobacco seedlings. The antioxidant enzyme activities in, Q96, Z101, and Y87 increased under mild drought stress, whereas Y116 showed decreased activity.

Conclusion

The drought resistance ranking among the four varieties is as follows: Q96 > Z101 > Y87 > Y116. Therefore, Q96 is a promising drought-tolerant breeding material that can be used as a reference for dryland cultivation of flue-cured tobacco.

Identification and Analysis of the Superoxide Dismutase (SOD) Gene Family and Potential Roles in High-Temperature Stress Response of Herbaceous Peony (Paeonia lactiflora Pall.)

The herbaceous peony (Paeonia lactiflora Pall.) plant is world-renowned for its ornamental, medicinal, edible, and oil values. As global warming intensifies, its growth and development are often affected by high-temperature stress, especially in low-latitude regions. Superoxide dismutase (SOD) is an important enzyme in the plant antioxidant systems and plays vital roles in stress response by maintaining the dynamic balance of reactive oxygen species (ROS) concentrations. To reveal the members of then SOD gene family and their potential roles under high-temperature stress, we performed a comprehensive identification of the SOD gene family in the low-latitude cultivar 'Hang Baishao' and analyzed the expression patterns of SOD family genes (PlSODs) in response to high-temperature stress and exogenous hormones. The present study identified ten potential PlSOD genes, encoding 145-261 amino acids, and their molecular weights varied from 15.319 to 29.973 kDa. Phylogenetic analysis indicated that PlSOD genes were categorized into three sub-families, and members within each sub-family exhibited similar conserved motifs. Gene expression analysis suggested that SOD genes were highly expressed in leaves, stems, and dormancy buds. Moreover, RNA-seq data revealed that PlCSD1-1, PlCSD3, and PlFSD1 may be related to high-temperature stress response. Finally, based on the Quantitative Real-time PCR (qRT-PCR) results, seven SOD genes were significantly upregulated in response to high-temperature stress, and exogenous EBR and ABA treatments can enhance high-temperature tolerance in P. lactiflora. Overall, these discoveries lay the foundation for elucidating the function of PlSOD genes for the thermotolerance of herbaceous peony and facilitating the genetic breeding of herbaceous peony cultivars with strong high-temperature resistance.

Genome-wide association scan reveals the reinforcing effect of nano-potassium in improving the yield and quality of salt-stressed barley via enhancing the antioxidant defense system

Salinity is one of the major environmental factor that can greatly impact the growth, development, and productivity of barley. Our study aims to detect the natural phenotypic variation of morphological and physiological traits under both salinity and potassium nanoparticles (n-K) treatment. In addition to understanding the genetic basis of salt tolerance in barley is a critical aspect of plant breeding for stress resilience. Therefore, a foliar application of n-K was applied at the vegetative stage for 138 barley accessions to enhance salt stress resilience. Interestingly, barley accessions showed high significant increment under n-K treatment compared to saline soil. Based on genome-wide association studies (GWAS) analysis, causative alleles /reliable genomic regions were discovered underlying improved salt resilience through the application of potassium nanoparticles. On chromosome 2H, a highly significant QTN marker (A:C) was located at position 36,665,559 bp which is associated with APX, AsA, GSH, GS, WGS, and TKW under n-K treatment. Inside this region, our candidate gene is HORVU.MOREX.r3.2HG0111480 that annotated as NAC domain protein. Allelic variation detected that the accessions carrying C allele showed higher antioxidants (APX, AsA, and GSH) and barley yield traits (GS, WGS, and TKW) than the accessions carrying A allele, suggesting a positive selection of the accessions carrying C allele that could be used to develop barley varieties with improved salt stress resilience.

An Integrated Framework for Drought Stress in Plants

With global warming, drought stress is becoming increasingly severe, causing serious impacts on crop yield and quality. In order to survive under adverse conditions such as drought stress, plants have evolved a certain mechanism to cope. The tolerance to drought stress is mainly improved through the synergistic effect of regulatory pathways, such as transcription factors, phytohormone, stomatal movement, osmotic substances, sRNA, and antioxidant systems. This study summarizes the research progress on plant drought resistance, in order to provide a reference for improving plant drought resistance and cultivating drought-resistant varieties through genetic engineering technology.

Enhancing Photosynthesis and Plant Productivity through Genetic Modification

Enhancing crop photosynthesis through genetic engineering technologies offers numerous opportunities to increase plant productivity. Key approaches include optimizing light utilization, increasing cytochrome b6f complex levels, and improving carbon fixation. Modifications to Rubisco and the photosynthetic electron transport chain are central to these strategies. Introducing alternative photorespiratory pathways and enhancing carbonic anhydrase activity can further increase the internal CO2 concentration, thereby improving photosynthetic efficiency. The efficient translocation of photosynthetically produced sugars, which are managed by sucrose transporters, is also critical for plant growth. Additionally, incorporating genes from C4 plants, such as phosphoenolpyruvate carboxylase and NADP-malic enzymes, enhances the CO2 concentration around Rubisco, reducing photorespiration. Targeting microRNAs and transcription factors is vital for increasing photosynthesis and plant productivity, especially under stress conditions. This review highlights potential biological targets, the genetic modifications of which are aimed at improving photosynthesis and increasing plant productivity, thereby determining key areas for future research and development.

Epigenetic changes induced by chronic and acute chromium stress treatments in Arabidopsis thaliana identified by the MSAP-Seq

Chromium (Cr) is an highly toxic metal to plants and causes severe damage to their growth, development, and reproduction. Plant exposure to chronic and acute Cr stress treatments results in significant changes at short time in the gene expression profile and at long time in the genomic DNA methylation profile at a transgenerational level and, consequently, in gene expression. These epigenetic modifications and their implications imposed by the Cr stress are not yet completely known in plants. Herein, were identified the epigenetic changes induced by chronic and acute Cr stress treatments in Arabidopsis thaliana plants using Methylation Sensitive Amplification Polymorphism coupled with next-generation sequencing (MSAP-Seq). First-generation Arabidopsis plants (termed F0 plants) kept under hoagland solution were subjected to Cr stress treatments. For chronic Cr stress, plants were treated through hoagland solution with 2.5 μM Cr during the entire cultivation period until seed harvest. Meanwhile, for acute Cr stress, plants were treated with 5 μM Cr during the first three weeks and returned to unstressful control condition until seed harvest. Seeds from F0 plants were sown and F1 plants were re-submitted to the same Cr stress treatments. The seed germination rate was evaluated from F-2 seeds harvested of F1 plants kept under different Cr stress treatments (0, 10, 20, and 40 μM) compared to the unstressful control condition. These data showed significant changes in the germination rate of F-2 seeds originating from stressed F1 plants compared to F-2 seeds harvested from unstressful control plants. Given this data, F1 plants kept under these chronic and acute Cr stress treatments and unstressful control condition were evaluated for the transgenerational epigenetic modifications using MSAP-Seq. The MSAP-Seq data showed that several genes were modified in their methylation status as a consequence of chronic and acute Cr stress treatment to maintain plant defenses activated. In particular, RNA processing, protein translation, photorespiration, energy production, transmembrane transport, DNA transcription, plant development, and plant resilience were the major biological processes modulated by epigenetic mechanisms identified in F1 plants kept under chronic and acute Cr stress. Therefore, collective data suggested that Arabidopsis plants kept under Cr stress regulate their epigenetic status over generations based on DNA methylation to modulate defense and resilience mechanisms.

Integrated analysis of yield response and early stage biochemical, molecular, and gene expression profiles of pre-breeding rice lines under water deficit stress

Breeding high yielding water-deficit tolerant rice is considered a primary goal for achieving the objectives of the sustainable development goals, 2030. However, evaluating the performance of the pre-breeding-promising parental-lines for water deficit tolerance prior to their incorporation in the breeding program is crucial for the success of the breeding programs. The aim of the current investigation is to assess the performance of a set of pre-breeding lines compared with their parents. To achieve this goal a set of 7 pre-breeding rice lines along with their parents (5 genotypes) were field evaluated under well-irrigated and water-stress conditions. Water stress was applied by flush irrigation every 12 days without keeping standing water after irrigation. Based on the field evaluation results, a pre-breeding line was selected to conduct physiological and expression analysis of drought related genes at the green house. Furthermore, a greenhouse trial was conducted in pots, where the genotypes were grown under well and stress irrigation conditions at seedling stage for physiological analysis and expression profiling of the genotypes. Results indicated that the pre-breeding lines which were high yielding under water shortage stress showed low drought susceptibility index. Those lines exhibited high proline, SOD, TSS content along with low levels of MDA content in their leaves. Moreover, the genotypes grain yield positively correlated with proline, SOD, TSS content in their leaves. The SSR markers RM22, RM525, RM324 and RM3805 were able to discriminate the tolerant parents from the sensitive one. Expression levels of the tested drought responsive genes revealed the upregulation of OsLEA3, OsAPX2, OsNAC1, OSDREB2A, OsDREB1C, OsZIP23, OsP5CS, OsAHL1 and OsCATA genes in response to water deficit stress as compared to their expression under normal irrigated condition. Taken together among the tested pre-breeding lines the RBL112 pre-breeding line is high yielding under water-deficit and could be used as donor for high yielding genes in the breeding for water deficit resistance. This investigation withdraws attention to evaluate the promising pre-breeding lines before their incorporation in the water deficit stress breeding program.