1
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Yang Q, Ji J, Jing R, Su H, Wang S, Guo A. Reynolds rules in swarm fly behavior based on KAN transformer tracking method. Sci Rep 2025; 15:6982. [PMID: 40011603 PMCID: PMC11865518 DOI: 10.1038/s41598-025-91674-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2024] [Accepted: 02/21/2025] [Indexed: 02/28/2025] Open
Abstract
The analysis of complex flight patterns and collective behaviors in swarming insects has emerged as a significant focus across biological and computational fields. Tracking these insects, like fruit fly, presents persistent challenges due to their rapid motion patterns and frequent occlusions in densely populated environments. To address these challenges, we propose a tracking method using particle filter framework combined with a Kolmogorov-Arnold Network (KAN)-Transformer model to extract the global features and fine-grained features of the trajectory. Additionally, manually annotated ground truth datasets are established to enable thorough assessment of tracking methods. Experimental results demonstrate the effectiveness and robustness of our proposed tracking method. Analysis of tracked trajectories revealed the Reynolds rules of flocking behavior.
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Affiliation(s)
- Qi Yang
- School of Life Sciences, Shanghai University, Shanghai, 200444, China
| | - Jiajun Ji
- School of Life Sciences, Shanghai University, Shanghai, 200444, China
| | - Ruomiao Jing
- School of Life Sciences, Shanghai University, Shanghai, 200444, China
| | - Haifeng Su
- School of Life Sciences, Shanghai University, Shanghai, 200444, China.
| | - Shuohong Wang
- Department of Molecular and Cellular Biology and Center for Brain Science, Harvard University, Cambridge, MA, 02138, USA
| | - Aike Guo
- School of Life Sciences, Shanghai University, Shanghai, 200444, China
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2
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Bragina JV, Goncharova AA, Besedina NG, Danilenkova LV, Kamysheva EA, Kamyshev NG. Genetic Control of Social Experience-Dependent Changes in Locomotor Activity in Drosophila melanogaster Males. ARCHIVES OF INSECT BIOCHEMISTRY AND PHYSIOLOGY 2025; 118:e70022. [PMID: 39966324 DOI: 10.1002/arch.70022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2024] [Revised: 12/10/2024] [Accepted: 12/19/2024] [Indexed: 02/20/2025]
Abstract
In animals, social experience plays an important role in the adaptive modification of behavior. Previous social experience changes locomotor activity in Drosophila melanogaster. In females, suppression of locomotion is observed only when flies are in aggregations, but males retain a reduced level of locomotor activity up to 5 days after being isolated from the group. The mechanisms underlying such behavioral plasticity still largely are unknown. In this study, we aimed to identify new candidate genes involved in the social experience-dependent modification of locomotor activity. We tested the effect of social experience on spontaneous locomotor activity in various mutant males, including those with impaired learning and memory, circadian rhythms, some biochemical pathways, and sensory systems. The results of the present study indicate that the biogenic amines and olfactory perception appear to play key roles in social experience-induced changes in locomotor activity. Also, we performed a screen of the collection of mutants carrying random autosomal insertions of PdL transposon. We isolated five candidate genes, of which two genes, Dek and Hel89B, encode proteins related to the formation of the epigenetic code, implying that epigenetic factors regulating gene expression may be involved in social experience-dependent modification of locomotor behavior.
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Affiliation(s)
- Julia V Bragina
- Pavlov Institute of Physiology, Russian Academy of Sciences, Saint Petersburg, Russia
| | - Anna A Goncharova
- Pavlov Institute of Physiology, Russian Academy of Sciences, Saint Petersburg, Russia
| | - Natalia G Besedina
- Pavlov Institute of Physiology, Russian Academy of Sciences, Saint Petersburg, Russia
| | - Larisa V Danilenkova
- Pavlov Institute of Physiology, Russian Academy of Sciences, Saint Petersburg, Russia
| | - Elena A Kamysheva
- Pavlov Institute of Physiology, Russian Academy of Sciences, Saint Petersburg, Russia
| | - Nikolai G Kamyshev
- Pavlov Institute of Physiology, Russian Academy of Sciences, Saint Petersburg, Russia
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3
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Jezovit JA, Levine JD. Chemical signals and social structures strengthen sexual isolation in Drosophila pseudoobscura. Commun Biol 2025; 8:76. [PMID: 39824898 PMCID: PMC11742438 DOI: 10.1038/s42003-025-07483-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Accepted: 01/07/2025] [Indexed: 01/20/2025] Open
Abstract
Species that coexist in hybrid zones sexually isolate through reproductive character displacement, a mechanism that favours divergence between species. In Drosophila, behavioural and physiological traits discourage heterospecific mating between species. Recently, social network analysis revealed flies produce strain-specific and species-specific social structures. A gene, degrees of kevin bacon (dokb) has also been discovered that accounts for differences in social structures between flies. Why differences in social structures exist between drosophilids is currently unknown. Here we show through an experimental evolution study that six generations of selection in experimental sympatry led to the divergence of social structures measured in Drosophila pseudoobscura and Drosophila persimilis flies. We found that the frequency of hybrid offspring decreased within a few generations, suggesting social structures are associated with the sexual isolation of species. We also report increased species' differences in the concentration of the cuticular hydrocarbon 5, 9-pentacosadiene after six generations of selection. The mean concentration of this compound converged in female flies of both species and diverged in male flies of both species, suggesting a quantitative link between increased sexual dimorphism and sexual isolation. Our results suggest that chemical signals, together with social structures, increase the sexual isolation between species in hybrid zones.
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Affiliation(s)
- Jacob A Jezovit
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, Canada
| | - Joel D Levine
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, Canada.
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4
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Jeong J, Kwon K, Geisseova TK, Lee J, Kwon T, Lim C. Drosulfakinin signaling encodes early-life memory for adaptive social plasticity. eLife 2024; 13:e103973. [PMID: 39692597 PMCID: PMC11706606 DOI: 10.7554/elife.103973] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2024] [Accepted: 12/09/2024] [Indexed: 12/19/2024] Open
Abstract
Drosophila establishes social clusters in groups, yet the underlying principles remain poorly understood. Here, we performed a systemic analysis of social network behavior (SNB) that quantifies individual social distance (SD) in a group over time. The SNB assessment in 175 inbred strains from the Drosophila Genetics Reference Panel showed a tight association of short SD with long developmental time, low food intake, and hypoactivity. The developmental inferiority in short-SD individuals was compensated by their group culturing. By contrast, developmental isolation silenced the beneficial effects of social interactions in adults and blunted the plasticity of SNB under physiological challenges. Transcriptome analyses revealed genetic diversity for SD traits, whereas social isolation reprogrammed select genetic pathways, regardless of SD phenotypes. In particular, social deprivation suppressed the expression of the neuropeptide Drosulfakinin (Dsk) in three pairs of adult brain neurons. Male-specific DSK signaling to cholecystokinin-like receptor 17D1 mediated the SNB plasticity. In fact, transgenic manipulations of the DSK neuron activity were sufficient to imitate the state of social experience. Given the functional conservation of mammalian Dsk homologs, we propose that animals may have evolved a dedicated neural mechanism to encode early-life experience and transform group properties adaptively.
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Affiliation(s)
- Jiwon Jeong
- Department of Biological Sciences, Ulsan National Institute of Science and TechnologyUlsanRepublic of Korea
| | - Kujin Kwon
- Department of Biomedical Engineering, Ulsan National Institute of Science and TechnologyUlsanRepublic of Korea
| | - Terezia Klaudia Geisseova
- Department of Biological Sciences, Ulsan National Institute of Science and TechnologyUlsanRepublic of Korea
| | - Jongbin Lee
- Research Center for Cellular Identity, Korea Advanced Institute of Science and TechnologyDaejeonRepublic of Korea
| | - Taejoon Kwon
- Department of Biomedical Engineering, Ulsan National Institute of Science and TechnologyUlsanRepublic of Korea
- Center for Genomic Integrity, Institute for Basic ScienceUlsanRepublic of Korea
- Graduate School of Health Science and Technology, Ulsan National Institute of Science and TechnologyUlsanRepublic of Korea
| | - Chunghun Lim
- Research Center for Cellular Identity, Korea Advanced Institute of Science and TechnologyDaejeonRepublic of Korea
- Department of Biological Sciences, Korea Advanced Institute of Science and TechnologyDaejeonRepublic of Korea
- Graduate School of Stem Cell and Regenerative Biology, Korea Advanced Institute of Science and TechnologyDaejeonRepublic of Korea
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5
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Jiménez-Padilla Y, Chan Y, Aletta MS, Lachance MA, Simon AF. The effect of microbiome on social spacing in Drosophila melanogaster depends on genetic background and sex. MICROPUBLICATION BIOLOGY 2024; 2024:10.17912/micropub.biology.001270. [PMID: 39381640 PMCID: PMC11461029 DOI: 10.17912/micropub.biology.001270] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Figures] [Subscribe] [Scholar Register] [Received: 06/27/2024] [Revised: 08/14/2024] [Accepted: 09/09/2024] [Indexed: 10/10/2024]
Abstract
The gut microbiome modulates many essential functions including metabolism, immunity, and behaviour. Specifically, within behaviour, social behaviours such as sociability, aggregation, mating preference, avoidance, oviposition, and aggression are known to be regulated in part by this host-microbiome relationship. Here, we show the microbiome's role in the determination of social spacing in a sex- and genotype-specific manner. Future work can be done on characterizing the microbiome in each of these fly strains to identify the species of microbes present as well as their abundance.
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Affiliation(s)
| | - Yen Chan
- Biology Department, University of Western Ontario, London, Ontario, Canada
| | - M. Sol Aletta
- Biology Department, University of Western Ontario, London, Ontario, Canada
| | | | - Anne F Simon
- Biology Department, University of Western Ontario, London, Ontario, Canada
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6
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Yost RT, Scott AM, Kurbaj JM, Walshe-Roussel B, Dukas R, Simon AF. Recovery from social isolation requires dopamine in males, but not the autism-related gene nlg3 in either sex. ROYAL SOCIETY OPEN SCIENCE 2024; 11:240604. [PMID: 39086833 PMCID: PMC11288677 DOI: 10.1098/rsos.240604] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Revised: 05/31/2024] [Accepted: 05/31/2024] [Indexed: 08/02/2024]
Abstract
Social isolation causes profound changes in social behaviour in a variety of species. However, the genetic and molecular mechanisms modulating behavioural responses to social isolation and social recovery remain to be elucidated. Here, we quantified the behavioural response of vinegar flies to social isolation using two distinct protocols (social space preference and sociability, the spontaneous tendencies to form groups). We found that social isolation increased social space and reduced sociability. These effects of social isolation were reversible and could be reduced after 3 days of group housing. Flies with a loss of function of neuroligin3 (orthologue of autism-related neuroligin genes) with known increased social space in a socially enriched environment were still able to recover from social isolation. We also show that dopamine (DA) is needed for a response to social isolation and recovery in males but not in females. Furthermore, only in males, DA levels are reduced after isolation and are not recovered after group housing. Finally, in socially enriched flies mutant for neuroligin3, DA levels are reduced in males, but not in females. We propose a model to explain how DA and neuroligin3 are involved in the behavioural response to social isolation and its recovery in a dynamic and sex-specific manner.
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Affiliation(s)
- Ryley T. Yost
- Department of Biology, Western University, London, Ontario, Canada
| | | | - Judy M. Kurbaj
- Department of Biology, Western University, London, Ontario, Canada
| | | | - Reuven Dukas
- Department of Psychology, Neuroscience and Behaviour, Animal Behaviour Group, McMaster University, Hamilton, Ontario, Canada
| | - Anne F. Simon
- Department of Biology, Western University, London, Ontario, Canada
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7
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Stojkovic M, Petrovic M, Capovilla M, Milojevic S, Makevic V, Budimirovic DB, Corscadden L, He S, Protic D. Using a Combination of Novel Research Tools to Understand Social Interaction in the Drosophila melanogaster Model for Fragile X Syndrome. BIOLOGY 2024; 13:432. [PMID: 38927312 PMCID: PMC11200401 DOI: 10.3390/biology13060432] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2024] [Revised: 05/31/2024] [Accepted: 06/06/2024] [Indexed: 06/28/2024]
Abstract
Fragile X syndrome (FXS), the most common monogenic cause of inherited intellectual disability and autism spectrum disorder, is caused by a full mutation (>200 CGG repeats) in the Fragile X Messenger Ribonucleoprotein 1 (FMR1) gene. Individuals with FXS experience various challenges related to social interaction (SI). Animal models, such as the Drosophila melanogaster model for FXS where the only ortholog of human FMR1 (dFMR1) is mutated, have played a crucial role in the understanding of FXS. The aim of this study was to investigate SI in the dFMR1B55 mutants (the groups of flies of both sexes simultaneously) using the novel Drosophila Shallow Chamber and a Python data processing pipeline based on social network analysis (SNA). In comparison with wild-type flies (w1118), SNA analysis in dFMR1B55 mutants revealed hypoactivity, fewer connections in their networks, longer interaction duration, a lower ability to transmit information efficiently, fewer alternative pathways for information transmission, a higher variability in the number of interactions they achieved, and flies tended to stay near the boundaries of the testing chamber. These observed alterations indicate the presence of characteristic strain-dependent social networks in dFMR1B55 flies, commonly referred to as the group phenotype. Finally, combining novel research tools is a valuable method for SI research in fruit flies.
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Affiliation(s)
- Maja Stojkovic
- Department of Pharmacology, Clinical Pharmacology and Toxicology, Faculty of Medicine, University of Belgrade, 11000 Belgrade, Serbia; (M.S.); (S.M.)
| | - Milan Petrovic
- Department of Informatics, University of Rijeka, 51000 Rijeka, Croatia;
- Center for Artificial Intelligence and Cybersecurity, University of Rijeka, 51000 Rijeka, Croatia
| | - Maria Capovilla
- UMR7275 CNRS-UCA, Institut de Pharmacologie Moléculaire et Cellulaire, 06560 Valbonne Sophia Antipolis, France;
| | - Sara Milojevic
- Department of Pharmacology, Clinical Pharmacology and Toxicology, Faculty of Medicine, University of Belgrade, 11000 Belgrade, Serbia; (M.S.); (S.M.)
| | - Vedrana Makevic
- Department of Pathophysiology, Faculty of Medicine, University of Belgrade, 11000 Belgrade, Serbia;
| | - Dejan B. Budimirovic
- Department of Psychiatry, Fragile X Clinic, Kennedy Krieger Institute, Baltimore, MD 21205, USA;
- Department of Psychiatry & Behavioral Sciences-Child Psychiatry, School of Medicine, Johns Hopkins University, Baltimore, MD 21205, USA
| | | | - Shuhan He
- Lab of Computer Science, Department of Internal Medicine, Harvard Medical School, Boston, MA 02115, USA;
| | - Dragana Protic
- Department of Pharmacology, Clinical Pharmacology and Toxicology, Faculty of Medicine, University of Belgrade, 11000 Belgrade, Serbia; (M.S.); (S.M.)
- Fragile X Clinic, Special Hospital for Cerebral Palsy and Developmental Neurology, 11000 Belgrade, Serbia
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8
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Suárez-Grimalt R, Grunwald Kadow IC, Scheunemann L. An integrative sensor of body states: how the mushroom body modulates behavior depending on physiological context. Learn Mem 2024; 31:a053918. [PMID: 38876486 PMCID: PMC11199956 DOI: 10.1101/lm.053918.124] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2024] [Accepted: 04/08/2024] [Indexed: 06/16/2024]
Abstract
The brain constantly compares past and present experiences to predict the future, thereby enabling instantaneous and future behavioral adjustments. Integration of external information with the animal's current internal needs and behavioral state represents a key challenge of the nervous system. Recent advancements in dissecting the function of the Drosophila mushroom body (MB) at the single-cell level have uncovered its three-layered logic and parallel systems conveying positive and negative values during associative learning. This review explores a lesser-known role of the MB in detecting and integrating body states such as hunger, thirst, and sleep, ultimately modulating motivation and sensory-driven decisions based on the physiological state of the fly. State-dependent signals predominantly affect the activity of modulatory MB input neurons (dopaminergic, serotoninergic, and octopaminergic), but also induce plastic changes directly at the level of the MB intrinsic and output neurons. Thus, the MB emerges as a tightly regulated relay station in the insect brain, orchestrating neuroadaptations due to current internal and behavioral states leading to short- but also long-lasting changes in behavior. While these adaptations are crucial to ensure fitness and survival, recent findings also underscore how circuit motifs in the MB may reflect fundamental design principles that contribute to maladaptive behaviors such as addiction or depression-like symptoms.
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Affiliation(s)
- Raquel Suárez-Grimalt
- Institute for Biology/Genetics, Freie Universität Berlin, 14195 Berlin, Germany
- Institut für Neurophysiologie and NeuroCure Cluster of Excellence, Charité-Universitätsmedizin Berlin, 10117 Berlin, Germany
| | | | - Lisa Scheunemann
- Institute for Biology/Genetics, Freie Universität Berlin, 14195 Berlin, Germany
- Institut für Neurophysiologie and NeuroCure Cluster of Excellence, Charité-Universitätsmedizin Berlin, 10117 Berlin, Germany
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9
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Li W, Jiang G, Yang G, Qiu F. Comprehensive Study on Mineral Processing Methods and Mineral Technical Economics of Manganese Ore in Chongqing Chengkou. ACS OMEGA 2024; 9:10929-10936. [PMID: 38463324 PMCID: PMC10918821 DOI: 10.1021/acsomega.3c10272] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Revised: 02/13/2024] [Accepted: 02/14/2024] [Indexed: 03/12/2024]
Abstract
Chongqing Chengkou manganese deposit is a large carbonate-type manganese deposit in the upper reaches of the Yangtze River, located in Gaoyan Town, Chengkou County, Chongqing. In order to improve the recovery rate of low-grade manganese ore and concentrate grade index, achieve efficient utilization of mineral resources, and sustainable development of Gaoyan manganese ore deposit in Chengkou, Chongqing, China, in this paper, by means of optical microscope analysis, high-resolution X-ray tomography technology, three-dimensional image analysis technology, X-ray diffraction analysis, X-ray fluorescence spectrum analysis, and technical and economic analysis, the occurrence state and process mineralogy of manganese are studied, and the technical and economic analysis of flotation, high-intensity magnetic separation, and gravity separation are carried out. It provides a reference for other mining enterprises to choose the most suitable beneficiation method according to the specific mineral species.
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Affiliation(s)
- Wensheng Li
- School of Chemistry and Chemical
Engineering, Chongqing University of Technology, Chongqing 400054, China
| | - Guangchao Jiang
- School of Chemistry and Chemical
Engineering, Chongqing University of Technology, Chongqing 400054, China
| | - Guangzhou Yang
- School of Chemistry and Chemical
Engineering, Chongqing University of Technology, Chongqing 400054, China
| | - Facheng Qiu
- School of Chemistry and Chemical
Engineering, Chongqing University of Technology, Chongqing 400054, China
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10
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Ike KGO, Lamers SJC, Kaim S, de Boer SF, Buwalda B, Billeter JC, Kas MJH. The human neuropsychiatric risk gene Drd2 is necessary for social functioning across evolutionary distant species. Mol Psychiatry 2024; 29:518-528. [PMID: 38114631 PMCID: PMC11116113 DOI: 10.1038/s41380-023-02345-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/23/2022] [Revised: 11/10/2023] [Accepted: 11/27/2023] [Indexed: 12/21/2023]
Abstract
The Drd2 gene, encoding the dopamine D2 receptor (D2R), was recently indicated as a potential target in the etiology of lowered sociability (i.e., social withdrawal), a symptom of several neuropsychiatric disorders such as Schizophrenia and Major Depression. Many animal species show social withdrawal in response to stimuli, including the vinegar fly Drosophila melanogaster and mice, which also share most human disease-related genes. Here we will test for causality between Drd2 and sociability and for its evolutionary conserved function in these two distant species, as well as assess its mechanism as a potential therapeutic target. During behavioral observations in groups of freely interacting D. melanogaster, Drd2 homologue mutant showed decreased social interactions and locomotor activity. After confirming Drd2's social effects in flies, conditional transgenic mice lacking Drd2 in dopaminergic cells (autoreceptor KO) or in serotonergic cells (heteroreceptor KO) were studied in semi-natural environments, where they could freely interact. Autoreceptor KOs showed increased sociability, but reduced activity, while no overall effect of Drd2 deletion was observed in heteroreceptor KOs. To determine acute effects of D2R signaling on sociability, we also showed that a direct intervention with the D2R agonist Sumanirole decreased sociability in wild type mice, while the antagonist showed no effects. Using a computational ethological approach, this study demonstrates that Drd2 regulates sociability across evolutionary distant species, and that activation of the mammalian D2R autoreceptor, in particular, is necessary for social functioning.
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Affiliation(s)
- Kevin G O Ike
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, The Netherlands
| | - Sanne J C Lamers
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, The Netherlands
| | - Soumya Kaim
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, The Netherlands
| | - Sietse F de Boer
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, The Netherlands
| | - Bauke Buwalda
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, The Netherlands
| | - Jean-Christophe Billeter
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, The Netherlands
| | - Martien J H Kas
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, The Netherlands.
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11
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Mariano V, Kanellopoulos AK, Ricci C, Di Marino D, Borrie SC, Dupraz S, Bradke F, Achsel T, Legius E, Odent S, Billuart P, Bienvenu T, Bagni C. Intellectual Disability and Behavioral Deficits Linked to CYFIP1 Missense Variants Disrupting Actin Polymerization. Biol Psychiatry 2024; 95:161-174. [PMID: 37704042 DOI: 10.1016/j.biopsych.2023.08.027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Revised: 08/27/2023] [Accepted: 08/31/2023] [Indexed: 09/15/2023]
Abstract
BACKGROUND 15q11.2 deletions and duplications have been linked to autism spectrum disorder, schizophrenia, and intellectual disability. Recent evidence suggests that dysfunctional CYFIP1 (cytoplasmic FMR1 interacting protein 1) contributes to the clinical phenotypes observed in individuals with 15q11.2 deletion/duplication syndrome. CYFIP1 plays crucial roles in neuronal development and brain connectivity, promoting actin polymerization and regulating local protein synthesis. However, information about the impact of single nucleotide variants in CYFIP1 on neurodevelopmental disorders is limited. METHODS Here, we report a family with 2 probands exhibiting intellectual disability, autism spectrum disorder, spastic tetraparesis, and brain morphology defects and who carry biallelic missense point mutations in the CYFIP1 gene. We used skin fibroblasts from one of the probands, the parents, and typically developing individuals to investigate the effect of the variants on the functionality of CYFIP1. In addition, we generated Drosophila knockin mutants to address the effect of the variants in vivo and gain insight into the molecular mechanism that underlies the clinical phenotype. RESULTS Our study revealed that the 2 missense variants are in protein domains responsible for maintaining the interaction within the wave regulatory complex. Molecular and cellular analyses in skin fibroblasts from one proband showed deficits in actin polymerization. The fly model for these mutations exhibited abnormal brain morphology and F-actin loss and recapitulated the core behavioral symptoms, such as deficits in social interaction and motor coordination. CONCLUSIONS Our findings suggest that the 2 CYFIP1 variants contribute to the clinical phenotype in the probands that reflects deficits in actin-mediated brain development processes.
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Affiliation(s)
- Vittoria Mariano
- Department of Fundamental Neurosciences, University of Lausanne, Lausanne, Switzerland; Department of Human Genetics, KU Leuven, Belgium
| | | | - Carlotta Ricci
- Department of Biomedicine and Prevention, University of Rome Tor Vergata, Rome, Italy
| | - Daniele Di Marino
- Department of Life and Environmental Sciences, New York-Marche Structural Biology Center, Polytechnic University of Marche, Ancona, Italy; Department of Neuroscience, Neuronal Death and Neuroprotection Unit, Mario Negri Institute for Pharmacological Research-IRCCS, Milan, Italy
| | | | - Sebastian Dupraz
- Axonal Growth and Regeneration Group, German Center for Neurodegenerative Diseases (DZNE), Bonn, Germany
| | - Frank Bradke
- Axonal Growth and Regeneration Group, German Center for Neurodegenerative Diseases (DZNE), Bonn, Germany
| | - Tilmann Achsel
- Department of Fundamental Neurosciences, University of Lausanne, Lausanne, Switzerland
| | - Eric Legius
- Department of Human Genetics, KU Leuven, Belgium
| | - Sylvie Odent
- Service de Génétique Clinique, Centre Labellisé pour les Anomalies du Développement Ouest, Centre Hospitalier Universitaire de Rennes, Rennes, France; Institut de Génétique et Développement de Rennes, CNRS, UMR 6290, Université de Rennes, ERN-ITHACA, France
| | - Pierre Billuart
- Institut de Psychiatrie et de Neurosciences de Paris, Institut National de la Santé et de la Recherche Médicale U1266, Université de Paris Cité (UPC), Paris, France
| | - Thierry Bienvenu
- Institut de Psychiatrie et de Neurosciences de Paris, Institut National de la Santé et de la Recherche Médicale U1266, Université de Paris Cité (UPC), Paris, France
| | - Claudia Bagni
- Department of Fundamental Neurosciences, University of Lausanne, Lausanne, Switzerland; Department of Biomedicine and Prevention, University of Rome Tor Vergata, Rome, Italy.
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12
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Yadav RSP, Ansari F, Bera N, Kent C, Agrawal P. Lessons from lonely flies: Molecular and neuronal mechanisms underlying social isolation. Neurosci Biobehav Rev 2024; 156:105504. [PMID: 38061597 DOI: 10.1016/j.neubiorev.2023.105504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Revised: 12/01/2023] [Accepted: 12/04/2023] [Indexed: 12/26/2023]
Abstract
Animals respond to changes in the environment which affect their internal state by adapting their behaviors. Social isolation is a form of passive environmental stressor that alters behaviors across animal kingdom, including humans, rodents, and fruit flies. Social isolation is known to increase violence, disrupt sleep and increase depression leading to poor mental and physical health. Recent evidences from several model organisms suggest that social isolation leads to remodeling of the transcriptional and epigenetic landscape which alters behavioral outcomes. In this review, we explore how manipulating social experience of fruit fly Drosophila melanogaster can shed light on molecular and neuronal mechanisms underlying isolation driven behaviors. We discuss the recent advances made using the powerful genetic toolkit and behavioral assays in Drosophila to uncover role of neuromodulators, sensory modalities, pheromones, neuronal circuits and molecular mechanisms in mediating social isolation. The insights gained from these studies could be crucial for developing effective therapeutic interventions in future.
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Affiliation(s)
- R Sai Prathap Yadav
- Centre for Molecular Neurosciences, Kasturba Medical College, Manipal Academy of Higher Education, Karnataka 576104, India
| | - Faizah Ansari
- Centre for Molecular Neurosciences, Kasturba Medical College, Manipal Academy of Higher Education, Karnataka 576104, India
| | - Neha Bera
- Centre for Molecular Neurosciences, Kasturba Medical College, Manipal Academy of Higher Education, Karnataka 576104, India
| | - Clement Kent
- Department of Biology, York University, Toronto, ON M3J 1P3, Canada
| | - Pavan Agrawal
- Centre for Molecular Neurosciences, Kasturba Medical College, Manipal Academy of Higher Education, Karnataka 576104, India.
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13
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Mi K, Li Y, Yang Y, Secombe J, Liu X. DVT: a high-throughput analysis pipeline for locomotion and social behavior in adult Drosophila melanogaster. Cell Biosci 2023; 13:187. [PMID: 37798731 PMCID: PMC10557313 DOI: 10.1186/s13578-023-01125-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2023] [Accepted: 08/31/2023] [Indexed: 10/07/2023] Open
Abstract
BACKGROUND Drosophila melanogaster is excellent animal model for understanding the molecular basis of human neurological and motor disorders. The experimental conditions and chamber design varied between studies. Moreover, most previously established paradigms focus on fly trace detection algorithm development. A comprehensive understanding on how fly behaves in the chamber is still lacking. RESULTS In this report, we established 74 unique behavior metrics quantifying spatiotemporal characteristics of adult fly locomotion and social behaviors, of which 49 were newly proposed. By the aiding of the developed analysis pipeline, Drosophila video tracking (DVT), we identified siginificantly different patterns of fly behavior confronted with different chamber height, fly density, illumination and experimental time. Meanwhile, three fly strains which are widely used as control lines, Canton-S(CS), w1118 and Oregon-R (OR), were found to exhibit distinct motion explosiveness and exercise endurance. CONCLUSIONS We believe the proposed behavior metrics set and pipeline should help identify subtle spatial and temporal differences of drosophila behavior confronted with different environmental factors or gene variants.
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Affiliation(s)
- Kai Mi
- Department of Pathogen Biology-Microbiology Division, State Key Laboratory of Reproductive Medicine and Offspring Health, Key Laboratory of Pathogen of Jiangsu Province, Key Laboratory of Human Functional Genomics of Jiangsu Province, Center of Global Health, Nanjing Medical University, Nanjing, 211166, China
- The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital, Gusu School, Nanjing Medical University, Suzhou, China
| | - Yiqing Li
- Department of Pathogen Biology-Microbiology Division, State Key Laboratory of Reproductive Medicine and Offspring Health, Key Laboratory of Pathogen of Jiangsu Province, Key Laboratory of Human Functional Genomics of Jiangsu Province, Center of Global Health, Nanjing Medical University, Nanjing, 211166, China
| | - Yuhang Yang
- Department of Pathogen Biology-Microbiology Division, State Key Laboratory of Reproductive Medicine and Offspring Health, Key Laboratory of Pathogen of Jiangsu Province, Key Laboratory of Human Functional Genomics of Jiangsu Province, Center of Global Health, Nanjing Medical University, Nanjing, 211166, China
| | - Julie Secombe
- Dominick P. Purpura Department of Neuroscience, Albert Einstein College of Medicine, Bronx, NY, USA
| | - Xingyin Liu
- Department of Pathogen Biology-Microbiology Division, State Key Laboratory of Reproductive Medicine and Offspring Health, Key Laboratory of Pathogen of Jiangsu Province, Key Laboratory of Human Functional Genomics of Jiangsu Province, Center of Global Health, Nanjing Medical University, Nanjing, 211166, China.
- The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital, Gusu School, Nanjing Medical University, Suzhou, China.
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14
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Bansal S, Lin S. Transcriptional Genetically Encoded Calcium Indicators in Drosophila. Cold Spring Harb Protoc 2023; 2023:8-18. [PMID: 36167674 DOI: 10.1101/pdb.top107797] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Knowing which neurons are active during behavior is a crucial step toward understanding how nervous systems work. Neuronal activation is generally accompanied by an increase in intracellular calcium levels. Therefore, intracellular calcium levels are widely used as a proxy for neuronal activity. Many types of synthetic components and bioluminescent or fluorescent proteins that report transient and long-term changes in intracellular calcium levels have been developed over the past 60 years. Calcium indicators that enable imaging of the dynamic activity of a large ensemble of neurons in behaving animals have revolutionized the field of neuroscience. Among these, transcription-based genetically encoded calcium indicators (transcriptional GECIs) have proven easy to use and do not depend on sophisticated imaging systems, offering unique advantages over other types of calcium indicators. Here, we describe the two currently available fly transcriptional GECIs-calcium-dependent nuclear import of LexA (CaLexA) and transcriptional reporter of intracellular calcium (TRIC)-and review studies that have used them. In the accompanying protocol, we present step-by-step details for generating CaLexA- and TRIC-ready flies and for imaging CaLexA and TRIC signals in dissected brains after experimental manipulations of intact free-moving flies.
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Affiliation(s)
- Sonia Bansal
- Institute of Molecular Biology, Academia Sinica, Taipei 115, Taiwan
| | - Suewei Lin
- Institute of Molecular Biology, Academia Sinica, Taipei 115, Taiwan
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15
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Petrović M, Meštrović A, Andretić Waldowski R, Filošević Vujnović A. A network-based analysis detects cocaine-induced changes in social interactions in Drosophila melanogaster. PLoS One 2023; 18:e0275795. [PMID: 36952449 PMCID: PMC10035901 DOI: 10.1371/journal.pone.0275795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2022] [Accepted: 09/19/2022] [Indexed: 03/25/2023] Open
Abstract
Addiction is a multifactorial biological and behavioral disorder that is studied using animal models, based on simple behavioral responses in isolated individuals. A couple of decades ago it was shown that Drosophila melanogaster can serve as a model organism for behaviors related to alcohol, nicotine and cocaine (COC) addiction. Scoring of COC-induced behaviors in a large group of flies has been technologically challenging, so we have applied a local, middle and global level of network-based analyses to study social interaction networks (SINs) among a group of 30 untreated males compared to those that have been orally administered with 0.50 mg/mL of COC for 24 hours. In this study, we have confirmed the previously described increase in locomotion upon COC feeding. We have isolated new network-based measures associated with COC, and influenced by group on the individual behavior. COC fed flies showed a longer duration of interactions on the local level, and formed larger, more densely populated and compact, communities at the middle level. Untreated flies have a higher number of interactions with other flies in a group at the local level, and at the middle level, these interactions led to the formation of separated communities. Although the network density at the global level is higher in COC fed flies, at the middle level the modularity is higher in untreated flies. One COC specific behavior that we have isolated was an increase in the proportion of individuals that do not interact with the rest of the group, considered as the individual difference in COC induced behavior and/or consequence of group influence on individual behavior. Our approach can be expanded on different classes of drugs with the same acute response as COC to determine drug specific network-based measures and could serve as a tool to determinate genetic and environmental factors that influence both drug addiction and social interaction.
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Affiliation(s)
- Milan Petrović
- Department of Informatics, University of Rijeka, Rijeka, Croatia
- Center for Artificial Intelligence and Cybersecurity, University of Rijeka, Rijeka, Croatia
| | - Ana Meštrović
- Department of Informatics, University of Rijeka, Rijeka, Croatia
- Center for Artificial Intelligence and Cybersecurity, University of Rijeka, Rijeka, Croatia
| | - Rozi Andretić Waldowski
- Department of Biotechnology, Laboratory for behavioral genetics, University of Rijeka, Rijeka, Croatia
| | - Ana Filošević Vujnović
- Department of Biotechnology, Laboratory for behavioral genetics, University of Rijeka, Rijeka, Croatia
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16
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Kohlmeier P, Billeter JC. Genetic mechanisms modulating behaviour through plastic chemosensory responses in insects. Mol Ecol 2023; 32:45-60. [PMID: 36239485 PMCID: PMC10092625 DOI: 10.1111/mec.16739] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2021] [Revised: 09/02/2022] [Accepted: 09/29/2022] [Indexed: 12/29/2022]
Abstract
The ability to transition between different behavioural stages is a widespread phenomenon across the animal kingdom. Such behavioural adaptations are often linked to changes in the sensitivity of those neurons that sense chemical cues associated with the respective behaviours. To identify the genetic mechanisms that regulate neuronal sensitivity, and by that behaviour, typically *omics approaches, such as RNA- and protein-sequencing, are applied to sensory organs of individuals displaying differences in behaviour. In this review, we discuss these genetic mechanisms and how they impact neuronal sensitivity, summarize the correlative and functional evidence for their role in regulating behaviour and discuss future directions. As such, this review can help interpret *omics data by providing a comprehensive list of already identified genes and mechanisms that impact behaviour through changes in neuronal sensitivity.
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Affiliation(s)
- Philip Kohlmeier
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, The Netherlands
| | - Jean-Christophe Billeter
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, The Netherlands
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17
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Shirasaki R, Tanaka R, Takekata H, Shimada T, Ishikawa Y, Kamikouchi A. Distinct decision-making properties underlying the species specificity of group formation of flies. ROYAL SOCIETY OPEN SCIENCE 2022; 9:220042. [PMID: 36016908 DOI: 10.5061/dryad.bcc2fqzdq] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Accepted: 07/27/2022] [Indexed: 05/24/2023]
Abstract
Many animal species form groups. Group characteristics differ between species, suggesting that the decision-making of individuals for grouping varies across species. However, the actual decision-making properties that lead to interspecific differences in group characteristics remain unclear. Here, we compared the group formation processes of two Drosophilinae fly species, Colocasiomyia alocasiae and Drosophila melanogaster, which form dense and sparse groups, respectively. A high-throughput tracking system revealed that C. alocasiae flies formed groups faster than D. melanogaster flies, and the probability of C. alocasiae remaining in groups was far higher than that of D. melanogaster. C. alocasiae flies joined groups even when the group size was small, whereas D. melanogaster flies joined groups only when the group size was sufficiently large. C. alocasiae flies attenuated their walking speed when the inter-individual distance between flies became small, whereas such behavioural properties were not clearly observed in D. melanogaster. Furthermore, depriving C. alocasiae flies of visual input affected grouping behaviours, resulting in a severe reduction in group formation. These findings show that C. alocasiae decision-making regarding grouping, which greatly depends on vision, is significantly different from D. melanogaster, leading to species-specific group formation properties.
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Affiliation(s)
- Riku Shirasaki
- Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
| | - Ryoya Tanaka
- Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
| | - Hiroki Takekata
- Center for Strategic Research Project, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan
| | - Takashi Shimada
- Mathematics and Informatics Center, The University of Tokyo, Tokyo, Japan
- Department of Systems Innovation, Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Yuki Ishikawa
- Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
| | - Azusa Kamikouchi
- Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
- Graduate School of Life Sciences, Tohoku University, Miyagi 980-8577, Japan
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18
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Shirasaki R, Tanaka R, Takekata H, Shimada T, Ishikawa Y, Kamikouchi A. Distinct decision-making properties underlying the species specificity of group formation of flies. ROYAL SOCIETY OPEN SCIENCE 2022; 9:220042. [PMID: 36016908 DOI: 10.6084/m9.figshare.c.6135571] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Accepted: 07/27/2022] [Indexed: 05/24/2023]
Abstract
Many animal species form groups. Group characteristics differ between species, suggesting that the decision-making of individuals for grouping varies across species. However, the actual decision-making properties that lead to interspecific differences in group characteristics remain unclear. Here, we compared the group formation processes of two Drosophilinae fly species, Colocasiomyia alocasiae and Drosophila melanogaster, which form dense and sparse groups, respectively. A high-throughput tracking system revealed that C. alocasiae flies formed groups faster than D. melanogaster flies, and the probability of C. alocasiae remaining in groups was far higher than that of D. melanogaster. C. alocasiae flies joined groups even when the group size was small, whereas D. melanogaster flies joined groups only when the group size was sufficiently large. C. alocasiae flies attenuated their walking speed when the inter-individual distance between flies became small, whereas such behavioural properties were not clearly observed in D. melanogaster. Furthermore, depriving C. alocasiae flies of visual input affected grouping behaviours, resulting in a severe reduction in group formation. These findings show that C. alocasiae decision-making regarding grouping, which greatly depends on vision, is significantly different from D. melanogaster, leading to species-specific group formation properties.
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Affiliation(s)
- Riku Shirasaki
- Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
| | - Ryoya Tanaka
- Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
| | - Hiroki Takekata
- Center for Strategic Research Project, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan
| | - Takashi Shimada
- Mathematics and Informatics Center, The University of Tokyo, Tokyo, Japan
- Department of Systems Innovation, Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Yuki Ishikawa
- Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
| | - Azusa Kamikouchi
- Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
- Graduate School of Life Sciences, Tohoku University, Miyagi 980-8577, Japan
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19
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Shirasaki R, Tanaka R, Takekata H, Shimada T, Ishikawa Y, Kamikouchi A. Distinct decision-making properties underlying the species specificity of group formation of flies. ROYAL SOCIETY OPEN SCIENCE 2022; 9:220042. [PMID: 36016908 PMCID: PMC9399694 DOI: 10.1098/rsos.220042] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Accepted: 07/27/2022] [Indexed: 05/08/2023]
Abstract
Many animal species form groups. Group characteristics differ between species, suggesting that the decision-making of individuals for grouping varies across species. However, the actual decision-making properties that lead to interspecific differences in group characteristics remain unclear. Here, we compared the group formation processes of two Drosophilinae fly species, Colocasiomyia alocasiae and Drosophila melanogaster, which form dense and sparse groups, respectively. A high-throughput tracking system revealed that C. alocasiae flies formed groups faster than D. melanogaster flies, and the probability of C. alocasiae remaining in groups was far higher than that of D. melanogaster. C. alocasiae flies joined groups even when the group size was small, whereas D. melanogaster flies joined groups only when the group size was sufficiently large. C. alocasiae flies attenuated their walking speed when the inter-individual distance between flies became small, whereas such behavioural properties were not clearly observed in D. melanogaster. Furthermore, depriving C. alocasiae flies of visual input affected grouping behaviours, resulting in a severe reduction in group formation. These findings show that C. alocasiae decision-making regarding grouping, which greatly depends on vision, is significantly different from D. melanogaster, leading to species-specific group formation properties.
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Affiliation(s)
- Riku Shirasaki
- Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
| | - Ryoya Tanaka
- Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
| | - Hiroki Takekata
- Center for Strategic Research Project, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan
| | - Takashi Shimada
- Mathematics and Informatics Center, The University of Tokyo, Tokyo, Japan
- Department of Systems Innovation, Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Yuki Ishikawa
- Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
| | - Azusa Kamikouchi
- Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
- Graduate School of Life Sciences, Tohoku University, Miyagi 980-8577, Japan
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20
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Wang ZY, McKenzie-Smith GC, Liu W, Cho HJ, Pereira T, Dhanerawala Z, Shaevitz JW, Kocher SD. Isolation disrupts social interactions and destabilizes brain development in bumblebees. Curr Biol 2022; 32:2754-2764.e5. [PMID: 35584698 PMCID: PMC9233014 DOI: 10.1016/j.cub.2022.04.066] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Revised: 02/28/2022] [Accepted: 04/22/2022] [Indexed: 12/24/2022]
Abstract
Social isolation, particularly in early life, leads to deleterious physiological and behavioral outcomes. Here, we leverage new high-throughput tools to comprehensively investigate the impact of isolation in the bumblebee, Bombus impatiens, from behavioral, molecular, and neuroanatomical perspectives. We reared newly emerged bumblebees in complete isolation, in small groups, or in their natal colony, and then analyzed their behaviors while alone or paired with another bee. We find that when alone, individuals of each rearing condition show distinct behavioral signatures. When paired with a conspecific, bees reared in small groups or in the natal colony express similar behavioral profiles. Isolated bees, however, showed increased social interactions. To identify the neurobiological correlates of these differences, we quantified brain gene expression and measured the volumes of key brain regions for a subset of individuals from each rearing condition. Overall, we find that isolation increases social interactions and disrupts gene expression and brain development. Limited social experience in small groups is sufficient to preserve typical patterns of brain development and social behavior.
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Affiliation(s)
- Z Yan Wang
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA; Lewis Sigler Institute of Integrative Genomics, Princeton University, Princeton, NJ, USA
| | - Grace C McKenzie-Smith
- Lewis Sigler Institute of Integrative Genomics, Princeton University, Princeton, NJ, USA; Department of Physics, Princeton University, Princeton, NJ, USA
| | - Weijie Liu
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA
| | - Hyo Jin Cho
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA
| | - Talmo Pereira
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
| | - Zahra Dhanerawala
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA; Department of Neuroscience, Washington University School of Medicine, St. Louis, MO, USA
| | - Joshua W Shaevitz
- Lewis Sigler Institute of Integrative Genomics, Princeton University, Princeton, NJ, USA; Department of Physics, Princeton University, Princeton, NJ, USA
| | - Sarah D Kocher
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA; Lewis Sigler Institute of Integrative Genomics, Princeton University, Princeton, NJ, USA.
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21
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Mollá-Albaladejo R, Sánchez-Alcañiz JA. Behavior Individuality: A Focus on Drosophila melanogaster. Front Physiol 2021; 12:719038. [PMID: 34916952 PMCID: PMC8670942 DOI: 10.3389/fphys.2021.719038] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Accepted: 10/11/2021] [Indexed: 12/02/2022] Open
Abstract
Among individuals, behavioral differences result from the well-known interplay of nature and nurture. Minute differences in the genetic code can lead to differential gene expression and function, dramatically affecting developmental processes and adult behavior. Environmental factors, epigenetic modifications, and gene expression and function are responsible for generating stochastic behaviors. In the last decade, the advent of high-throughput sequencing has facilitated studying the genetic basis of behavior and individuality. We can now study the genomes of multiple individuals and infer which genetic variations might be responsible for the observed behavior. In addition, the development of high-throughput behavioral paradigms, where multiple isogenic animals can be analyzed in various environmental conditions, has again facilitated the study of the influence of genetic and environmental variations in animal personality. Mainly, Drosophila melanogaster has been the focus of a great effort to understand how inter-individual behavioral differences emerge. The possibility of using large numbers of animals, isogenic populations, and the possibility of modifying neuronal function has made it an ideal model to search for the origins of individuality. In the present review, we will focus on the recent findings that try to shed light on the emergence of individuality with a particular interest in D. melanogaster.
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22
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Jezovit JA, Alwash N, Levine JD. Using Flies to Understand Social Networks. Front Neural Circuits 2021; 15:755093. [PMID: 34924963 PMCID: PMC8683092 DOI: 10.3389/fncir.2021.755093] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2021] [Accepted: 11/08/2021] [Indexed: 12/21/2022] Open
Abstract
Many animals live in groups and interact with each other, creating an organized collective structure. Social network analysis (SNA) is a statistical tool that aids in revealing and understanding the organized patterns of shared social connections between individuals in groups. Surprisingly, the application of SNA revealed that Drosophila melanogaster, previously considered a solitary organism, displays group dynamics and that the structure of group life is inherited. Although the number of studies investigating Drosophila social networks is currently limited, they address a wide array of questions that have only begun to capture the details of group level behavior in this insect. Here, we aim to review these studies, comparing their respective scopes and the methods used, to draw parallels between them and the broader body of knowledge available. For example, we highlight how despite methodological differences, there are similarities across studies investigating the effects of social isolation on social network dynamics. Finally, this review aims to generate hypotheses and predictions that inspire future research in the emerging field of Drosophila social networks.
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Affiliation(s)
- Jacob A. Jezovit
- Department of Cell and Systems Biology, University of Toronto Mississauga, Mississauga, ON, Canada
| | - Nawar Alwash
- Department of Cell and Systems Biology, University of Toronto Mississauga, Mississauga, ON, Canada
| | - Joel D. Levine
- Department of Cell and Systems Biology, University of Toronto Mississauga, Mississauga, ON, Canada
- Department of Cell and Systems Biology, University of Toronto, Toronto, ON, Canada
- International Research Centre for Neurointelligence, University of Tokyo, Tokyo, Japan
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23
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Ni L. The Structure and Function of Ionotropic Receptors in Drosophila. Front Mol Neurosci 2021; 13:638839. [PMID: 33597847 PMCID: PMC7882480 DOI: 10.3389/fnmol.2020.638839] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Accepted: 12/28/2020] [Indexed: 12/21/2022] Open
Abstract
Ionotropic receptors (IRs) are a highly divergent subfamily of ionotropic glutamate receptors (iGluR) and are conserved across Protostomia, a major branch of the animal kingdom that encompasses both Ecdysozoa and Lophothrochozoa. They are broadly expressed in peripheral sensory systems, concentrated in sensory dendrites, and function in chemosensation, thermosensation, and hygrosensation. As iGluRs, four IR subunits form a functional ion channel to detect environmental stimuli. Most IR receptors comprise individual stimulus-specific tuning receptors and one or two broadly expressed coreceptors. This review summarizes the discoveries of the structure of IR complexes and the expression and function of each IR, as well as discusses the future direction for IR studies.
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Affiliation(s)
- Lina Ni
- School of Neuroscience, Virginia Tech, Blacksburg, VA, United States
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24
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Dombrovski M, Condron B. Critical periods shaping the social brain: A perspective from Drosophila. Bioessays 2020; 43:e2000246. [PMID: 33215730 DOI: 10.1002/bies.202000246] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2020] [Revised: 09/28/2020] [Accepted: 09/29/2020] [Indexed: 11/08/2022]
Abstract
Many sensory processing regions of the central brain undergo critical periods of experience-dependent plasticity. During this time ethologically relevant information shapes circuit structure and function. The mechanisms that control critical period timing and duration are poorly understood, and this is of special importance for those later periods of development, which often give rise to complex cognitive functions such as social behavior. Here, we review recent findings in Drosophila, an organism that has some unique experimental advantages, and introduce novel views for manipulating plasticity in the post-embryonic brain. Critical periods in larval and young adult flies resemble classic vertebrate models with distinct onset and termination, display clear connections with complex behaviors, and provide opportunities to control the time course of plasticity. These findings may extend our knowledge about mechanisms underlying extension and reopening of critical periods, a concept that has great relevance to many human neurodevelopmental disorders.
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Affiliation(s)
- Mark Dombrovski
- Department of Biology, University of Virginia, Charlottesville, Virginia, USA
| | - Barry Condron
- Department of Biology, University of Virginia, Charlottesville, Virginia, USA
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25
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Bentzur A, Ben-Shaanan S, Benichou JIC, Costi E, Levi M, Ilany A, Shohat-Ophir G. Early Life Experience Shapes Male Behavior and Social Networks in Drosophila. Curr Biol 2020; 31:486-501.e3. [PMID: 33186552 DOI: 10.1016/j.cub.2020.10.060] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2020] [Revised: 08/20/2020] [Accepted: 10/20/2020] [Indexed: 10/23/2022]
Abstract
Living in a group creates a complex and dynamic environment in which behavior of individuals is influenced by and affects the behavior of others. Although social interaction and group living are fundamental adaptations exhibited by many organisms, little is known about how prior social experience, internal states, and group composition shape behavior in groups. Here, we present an analytical framework for studying the interplay between social experience and group interaction in Drosophila melanogaster. We simplified the complexity of interactions in a group using a series of experiments in which we controlled the social experience and motivational states of individuals to compare behavioral patterns and social networks of groups under different conditions. We show that social enrichment promotes the formation of distinct group structure that is characterized by high network modularity, high inter-individual and inter-group variance, high inter-individual coordination, and stable social clusters. Using environmental and genetic manipulations, we show that visual cues and cVA-sensing neurons are necessary for the expression of social interaction and network structure in groups. Finally, we explored the formation of group behavior and structure in heterogenous groups composed of flies with distinct internal states and documented emergent structures that are beyond the sum of the individuals that constitute it. Our results demonstrate that fruit flies exhibit complex and dynamic social structures that are modulated by the experience and composition of different individuals within the group. This paves the path for using simple model organisms to dissect the neurobiology of behavior in complex social environments.
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Affiliation(s)
- Assa Bentzur
- The Mina & Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan 5290002, Israel
| | - Shir Ben-Shaanan
- The Mina & Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan 5290002, Israel
| | - Jennifer I C Benichou
- The Mina & Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan 5290002, Israel
| | - Eliezer Costi
- The Mina & Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan 5290002, Israel
| | - Mali Levi
- The Mina & Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan 5290002, Israel
| | - Amiyaal Ilany
- The Mina & Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan 5290002, Israel.
| | - Galit Shohat-Ophir
- The Mina & Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan 5290002, Israel; The Leslie and Susan Gonda Multidisciplinary Brain Research Center, Bar-Ilan University, Ramat-Gan 5290002, Israel.
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26
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Sun Y, Qiu R, Li X, Cheng Y, Gao S, Kong F, Liu L, Zhu Y. Social attraction in Drosophila is regulated by the mushroom body and serotonergic system. Nat Commun 2020; 11:5350. [PMID: 33093442 PMCID: PMC7582864 DOI: 10.1038/s41467-020-19102-3] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2019] [Accepted: 09/24/2020] [Indexed: 01/18/2023] Open
Abstract
Sociality is among the most important motivators of human behaviour. However, the neural mechanisms determining levels of sociality are largely unknown, primarily due to a lack of suitable animal models. Here, we report the presence of a surprising degree of general sociality in Drosophila. A newly-developed paradigm to study social approach behaviour in flies reveal that social cues perceive through both vision and olfaction converged in a central brain region, the γ lobe of the mushroom body, which exhibite activation in response to social experience. The activity of these γ neurons control the motivational drive for social interaction. At the molecular level, the serotonergic system is critical for social affinity. These results demonstrate that Drosophila are highly sociable, providing a suitable model system for elucidating the mechanisms underlying the motivation for sociality. Robust social attraction in fruit flies relies on two prominent senses, vision and olfaction, which converge to central brain neurons. The neurons of the γ lobe of the mushroom bodies integrate sensory information and modulate social affinity.
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Affiliation(s)
- Yuanjie Sun
- State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Beijing, 100101, China.,University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Rong Qiu
- State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Beijing, 100101, China.,New England Biolabs (Beijing) LTD., No.1 Wang Zhuang Road, Beijing, China
| | - Xiaonan Li
- State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Beijing, 100101, China.,University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Yaxin Cheng
- State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Beijing, 100101, China.,University of Chinese Academy of Sciences, Beijing, 100049, China.,Shenzhen Science Museum, Shangbu Road, 1003, Shenzhen, China
| | - Shan Gao
- State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Beijing, 100101, China.,University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Fanchen Kong
- State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Beijing, 100101, China.,University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Li Liu
- State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Beijing, 100101, China.,University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Yan Zhu
- State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Beijing, 100101, China. .,University of Chinese Academy of Sciences, Beijing, 100049, China. .,Advanced Innovation Center for Human Brain Protection, Capital Medical University, Beijing, China.
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27
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Integrative developmental ecology: a review of density-dependent effects on life-history traits and host-microbe interactions in non-social holometabolous insects. Evol Ecol 2020. [DOI: 10.1007/s10682-020-10073-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
AbstractPopulation density modulates a wide range of eco-evolutionary processes including inter- and intra-specific competition, fitness and population dynamics. In holometabolous insects, the larval stage is particularly susceptible to density-dependent effects because the larva is the resource-acquiring stage. Larval density-dependent effects can modulate the expression of life-history traits not only in the larval and adult stages but also downstream for population dynamics and evolution. Better understanding the scope and generality of density-dependent effects on life-history traits of current and future generations can provide useful knowledge for both theory and experiments in developmental ecology. Here, we review the literature on larval density-dependent effects on fitness of non-social holometabolous insects. First, we provide a functional definition of density to navigate the terminology in the literature. We then classify the biological levels upon which larval density-dependent effects can be observed followed by a review of the literature produced over the past decades across major non-social holometabolous groups. Next, we argue that host-microbe interactions are yet an overlooked biological level susceptible to density-dependent effects and propose a conceptual model to explain how density-dependent effects on host-microbe interactions can modulate density-dependent fitness curves. In summary, this review provides an integrative framework of density-dependent effects across biological levels which can be used to guide future research in the field of ecology and evolution.
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28
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Rooke R, Rasool A, Schneider J, Levine JD. Drosophila melanogaster behaviour changes in different social environments based on group size and density. Commun Biol 2020; 3:304. [PMID: 32533063 PMCID: PMC7293324 DOI: 10.1038/s42003-020-1024-z] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2019] [Accepted: 05/22/2020] [Indexed: 12/05/2022] Open
Abstract
Many organisms, when alone, behave differently from when they are among a crowd. Drosophila similarly display social behaviour and collective behaviour dynamics within groups not seen in individuals. In flies, these emergent behaviours may be in response to the global size of the group or local nearest-neighbour density. Here we investigate i) which aspect of social life flies respond to: group size, density, or both and ii) whether behavioural changes within the group are dependent on olfactory support cells. Behavioural assays demonstrate that flies adjust their interactive behaviour to group size but otherwise compensate for density by achieving a standard rate of movement, suggesting that individuals are aware of the number of others within their group. We show that olfactory support cells are necessary for flies to behave normally in large groups. These findings shed insight into the subtle and complex life of Drosophila within a social setting.
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Affiliation(s)
- Rebecca Rooke
- Department of Biology, University of Toronto at Mississauga, 3359 Mississauga Rd. North, Mississauga, ON, L5L 1C6, Canada
| | - Amara Rasool
- Department of Biology, University of Toronto at Mississauga, 3359 Mississauga Rd. North, Mississauga, ON, L5L 1C6, Canada
| | - Jonathan Schneider
- Department of Biology, University of Toronto at Mississauga, 3359 Mississauga Rd. North, Mississauga, ON, L5L 1C6, Canada
| | - Joel D Levine
- Department of Biology, University of Toronto at Mississauga, 3359 Mississauga Rd. North, Mississauga, ON, L5L 1C6, Canada.
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29
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Jezovit JA, Rooke R, Schneider J, Levine JD. Behavioral and environmental contributions to drosophilid social networks. Proc Natl Acad Sci U S A 2020; 117:11573-11583. [PMID: 32404421 PMCID: PMC7261129 DOI: 10.1073/pnas.1920642117] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Abstract
Animals interact with each other in species-specific reproducible patterns. These patterns of organization are captured by social network analysis, and social interaction networks (SINs) have been described for a wide variety of species including fish, insects, birds, and mammals. The aim of this study is to understand the evolution of social organization in Drosophila Using a comparative ecological, phylogenetic, and behavioral approach, the different properties of SINs formed by 20 drosophilids were compared. We investigate whether drosophilid network structures arise from common ancestry, a response to the species' past climate, other social behaviors, or a combination of these factors. This study shows that differences in past climate predicted the species' current SIN properties. The drosophilid phylogeny offered no value to predicting species' differences in SINs through phylogenetic signal tests. This suggests that group-level social behaviors in drosophilid species are shaped by divergent climates. However, we find that the social distance at which flies interact correlated with the drosophilid phylogeny, indicating that behavioral elements of SINs have remained largely unchanged in their evolutionary history. We find a significant correlation of leg length to social distance, outlining the interdependence of anatomy and complex social structures. Although SINs display a complex evolutionary relationship across drosophilids, this study suggests that the ecology, and not common ancestry, contributes to diversity in social structure in Drosophila.
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Affiliation(s)
- Jacob A Jezovit
- Department of Biology, University of Toronto Mississauga, Mississauga, ON L5L 1C6, Canada
| | - Rebecca Rooke
- Department of Biology, University of Toronto Mississauga, Mississauga, ON L5L 1C6, Canada
| | - Jonathan Schneider
- Department of Biology, University of Toronto Mississauga, Mississauga, ON L5L 1C6, Canada
| | - Joel D Levine
- Department of Biology, University of Toronto Mississauga, Mississauga, ON L5L 1C6, Canada
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