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Rosales SA, Díaz PA, Muñoz P, Álvarez G. Modeling the dynamics of harmful algal bloom events in two bays from the northern Chilean upwelling system. Harmful Algae 2024; 132:102583. [PMID: 38331541 DOI: 10.1016/j.hal.2024.102583] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Revised: 01/08/2024] [Accepted: 01/15/2024] [Indexed: 02/10/2024]
Abstract
The bays of Tongoy and Guanaqueros are located in the Humboldt Current system, where Argopecten purpuratus has been the subject of intense aquaculture development. These bays lie in one of the most productive marine ecosystems on Earth and are dominated by permanent coastal upwelling at Lengua de Vaca Point and Choros Point, one of the three upwelling centers on the Chilean coast. Significantly, this productive system experiences a high recurrence of harmful algal bloom (HAB) events. This paper examines 9-year (2010-2018) samples of three toxic microalgal species collected in different monitoring programs and research projects. During this period, nine HAB events were detected in Guanaqueros Bay and 14 in Tongoy Bay. Among these, three HAB events were produced simultaneously in both bays by Pseudo-nitzschia australis, and two events produced simultaneously were detected in one bay by Alexandrium spp. and the other by Dinophysis acuminata. Before El Niño 2015-16, there were more HAB events of longer duration by the three species. Since El Niño, the number and duration of events were reduced and only produced by P. australis. HAB events were simulated with the FVCOM model and a virtual particle tracker model to evaluate the dynamics of bays and their relationship with HAB events. The results showed retention in bays during the relaxation conditions of upwelling and low connectivity between bays, which explains why almost no simultaneous events were recorded.
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Affiliation(s)
- Sergio A Rosales
- Programa de Doctorado en Biología y Ecología Aplicada, Universidad Católica del Norte, Coquimbo, Chile; Departamento de Biología Marina, Facultad de Ciencias del Mar, Universidad Católica del Norte, Coquimbo, Chile.
| | - Patricio A Díaz
- Centro i∼mar & CeBiB, Universidad de Los Lagos, Casilla 557, Puerto Montt, Chile
| | - Práxedes Muñoz
- Departamento de Biología Marina, Facultad de Ciencias del Mar, Universidad Católica del Norte, Coquimbo, Chile
| | - Gonzalo Álvarez
- Departamento de Acuicultura, Facultad de Ciencias del Mar, Universidad Católica del Norte, Coquimbo, Chile
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Zheng K, Dong Y, Liang Y, Liu Y, Zhang X, Zhang W, Wang Z, Shao H, Sung YY, Mok WJ, Wong LL, McMinn A, Wang M. Genomic diversity and ecological distribution of marine Pseudoalteromonas phages. Mar Life Sci Technol 2023; 5:271-285. [PMID: 37275543 PMCID: PMC10232697 DOI: 10.1007/s42995-022-00160-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/15/2022] [Accepted: 12/01/2022] [Indexed: 06/07/2023]
Abstract
Pseudoalteromonas, with a ubiquitous distribution, is one of the most abundant marine bacterial genera. It is especially abundant in the deep sea and polar seas, where it has been found to have a broad metabolic capacity and unique co-existence strategies with other organisms. However, only a few Pseudoalteromonas phages have so far been isolated and investigated and their genomic diversity and distribution patterns are still unclear. Here, the genomes, taxonomic features and distribution patterns of Pseudoalteromonas phages are systematically analyzed, based on the microbial and viral genomes and metagenome datasets. A total of 143 complete or nearly complete Pseudoalteromonas-associated phage genomes (PSAPGs) were identified, including 34 Pseudoalteromonas phage isolates, 24 proviruses, and 85 Pseudoalteromonas-associated uncultured viral genomes (UViGs); these were assigned to 47 viral clusters at the genus level. Many integrated proviruses (n = 24) and filamentous phages were detected (n = 32), suggesting the prevalence of viral lysogenic life cycle in Pseudoalteromonas. PSAPGs encoded 66 types of 249 potential auxiliary metabolic genes (AMGs) relating to peptidases and nucleotide metabolism. They may also participate in marine biogeochemical cycles through the manipulation of the metabolism of their hosts, especially in the phosphorus and sulfur cycles. Siphoviral and filamentous PSAPGs were the predominant viral lineages found in polar areas, while some myoviral and siphoviral PSAPGs encoding transposase were more abundant in the deep sea. This study has expanded our understanding of the taxonomy, phylogenetic and ecological scope of marine Pseudoalteromonas phages and deepens our knowledge of viral impacts on Pseudoalteromonas. It will provide a baseline for the study of interactions between phages and Pseudoalteromonas in the ocean. Supplementary Information The online version contains supplementary material available at 10.1007/s42995-022-00160-z.
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Affiliation(s)
- Kaiyang Zheng
- College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, 266100 China
| | - Yue Dong
- College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, 266100 China
| | - Yantao Liang
- College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, 266100 China
- UMT-OUC Joint Center for Marine Studies, Qingdao, 266003 China
| | - Yundan Liu
- College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, 266100 China
| | - Xinran Zhang
- College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, 266100 China
| | - Wenjing Zhang
- College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, 266100 China
| | - Ziyue Wang
- College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, 266100 China
| | - Hongbing Shao
- College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, 266100 China
- UMT-OUC Joint Center for Marine Studies, Qingdao, 266003 China
| | - Yeong Yik Sung
- UMT-OUC Joint Center for Marine Studies, Qingdao, 266003 China
- Institute of Marine Biotechnology, Universiti Malaysia Terengganu (UMT), 21030 Kuala Nerus, Malaysia
| | - Wen Jye Mok
- UMT-OUC Joint Center for Marine Studies, Qingdao, 266003 China
- Institute of Marine Biotechnology, Universiti Malaysia Terengganu (UMT), 21030 Kuala Nerus, Malaysia
| | - Li Lian Wong
- UMT-OUC Joint Center for Marine Studies, Qingdao, 266003 China
- Institute of Marine Biotechnology, Universiti Malaysia Terengganu (UMT), 21030 Kuala Nerus, Malaysia
| | - Andrew McMinn
- College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, 266100 China
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Australia
| | - Min Wang
- College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, 266100 China
- UMT-OUC Joint Center for Marine Studies, Qingdao, 266003 China
- Haide College, Ocean University of China, Qingdao, 266100 China
- The Affiliated Hospital of Qingdao University, Qingdao, 266000 China
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Wang J, Yin X, Xu M, Chen Y, Ji N, Gu H, Cai Y, Shen X. Isolation and characterization of a high-efficiency algicidal bacterium Pseudoalteromonas sp. LD-B6 against the harmful dinoflagellate Noctiluca scintillans. Front Microbiol 2022; 13:1091561. [PMID: 36619989 PMCID: PMC9814975 DOI: 10.3389/fmicb.2022.1091561] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2022] [Accepted: 12/05/2022] [Indexed: 12/24/2022] Open
Abstract
The dinoflagellate Noctiluca scintillans is a harmful algal species that is globally distributed and poses a certain threat to marine ecosystems. Recent research has shown that the application of algicidal bacteria is a promising method to prevent and control such harmful algal blooms (HABs), given its advantages of safety and efficiency. In this study, a strain of algicidal bacterium LD-B6 with high efficiency against N. scintillans was isolated from the coastal waters of Lianyungang, China. 16S rDNA sequence analysis showed that the strain LD-B6 belongs to the genus Pseudoalteromonas. Furthermore, the algicidal effect of LD-B6 on N. scintillans was investigated. The results showed that strain LD-B6 exerted strong algicidal activity against N. scintillans. After 12 h of bacterial culture addition to algal cultures at a 2% final volume rate, the algicidal activity reached 90.5%, and the algicidal activity of LD-B6 was influenced by the density of N. scintillans. In addition, the algicidal bacterium LD-B6 was found to indirectly lyse algal cells by secreting extracellular compounds. These algicidal compounds were stable, indicating that they are not proteins. Importantly, strain LD-B6 was broadly general, showing varying degrees of lysing effects against five of the six algal species tested. On the basis of the described studies above, the algicidal powder was also initially developed. In summary, the isolated bacterial strain LD-B6 shows the potent algicidal capability to serve as a candidate algicidal bacterium against N. scintillans blooms.
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Affiliation(s)
- Junyue Wang
- Jiangsu Key Laboratory of Marine Bioresources and Environment, Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
- Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Xueyao Yin
- Jiangsu Key Laboratory of Marine Bioresources and Environment, Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
- Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Mingyang Xu
- Jiangsu Key Laboratory of Marine Bioresources and Environment, Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
- Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Yifan Chen
- Jiangsu Key Laboratory of Marine Bioresources and Environment, Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
- Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Nanjing Ji
- Jiangsu Key Laboratory of Marine Bioresources and Environment, Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
- Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Haifeng Gu
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen, China
| | - Yuefeng Cai
- Jiangsu Key Laboratory of Marine Bioresources and Environment, Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
- Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Xin Shen
- Jiangsu Key Laboratory of Marine Bioresources and Environment, Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
- Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
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Sousa JMG, Louvado A, Coelho FJRC, Oliveira V, Oliveira H, Cleary DFR, Gomes NCM. In vitro study of the modulatory effects of heat-killed bacterial biomass on aquaculture bacterioplankton communities. Sci Rep 2022; 12:19699. [PMID: 36385260 PMCID: PMC9669034 DOI: 10.1038/s41598-022-23439-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2022] [Accepted: 10/31/2022] [Indexed: 11/17/2022] Open
Abstract
Recent studies have shown that the addition of non-viable microbial biomass or their components (postbiotics) to fish feed can modulate the gut microbiome and positively influence fish health in aquaculture systems. However, no information was hitherto available on the use of non-viable microbial biomass to manipulate aquaculture bacterioplankton communities. To fill this gap, here we used an in vitro model to assess the effects of heat-killed biomasses of an antagonistic strain Pseudoalteromonas rubra SubTr2 and a non-antagonist strain Escherichia coli DH5α on bacterioplankton communities of a recirculating aquaculture system (RAS). Our results showed that these biomasses can have generalist and species-specific effects on aquaculture bacterioplankton structure and function. In addition, they enriched the abundance of bacterial predators, reduced bacterial load and potentially influenced nutrient cycling and pathogen development in aquaculture water. Despite its preliminary nature, for the first time, this study showed that heat-killed microbial biomass has potential application as an in situ modulator of bacterioplankton in aquaculture systems.
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Affiliation(s)
- J. M. G. Sousa
- grid.7311.40000000123236065CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - A. Louvado
- grid.7311.40000000123236065CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - F. J. R. C. Coelho
- grid.7311.40000000123236065CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - V. Oliveira
- grid.7311.40000000123236065CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - H. Oliveira
- grid.7311.40000000123236065CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - D. F. R. Cleary
- grid.7311.40000000123236065CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - N. C. M. Gomes
- grid.7311.40000000123236065CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
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Corcoran AA, Ohan J, Hanschen ER, Granite A, Martinez H, Holguin F, Hovde BT, Starkenburg SR. Scale-dependent enhancement of productivity and stability in xenic Nannochloropsis cultures. ALGAL RES 2022. [DOI: 10.1016/j.algal.2022.102892] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Serra V, Gammuto L, Petroni G, Ciurli A, Chiellini C. Identification of the bacteria associated to the phycosphere of the Chlorella-like strain SEC_LI_ChL_1. ALGAL RES 2022; 67:102869. [DOI: 10.1016/j.algal.2022.102869] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Sildever S, Nishi N, Inaba N, Asakura T, Kikuchi J, Asano Y, Kobayashi T, Gojobori T, Nagai S. Monitoring harmful microalgal species and their appearance in Tokyo Bay, Japan, using metabarcoding. MBMG 2022. [DOI: 10.3897/mbmg.6.79471] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
During the recent decade, high-throughput sequencing (HTS) techniques, in particular, DNA metabarcoding, have facilitated increased detection of biodiversity, including harmful algal bloom (HAB) species. In this study, the presence of HAB species and their appearance patterns were investigated by employing molecular and light microscopy-based monitoring in Tokyo Bay, Japan. The potential co-appearance patterns between the HAB species, as well as with other eukaryotes and prokaryotes were investigated using correlation and association rule-based time-series analysis. In total, 40 unique HAB species were detected, including 12 toxin-producing HAB species previously not reported from the area. More than half of the HAB species were present throughout the sampling season (summer to autumn) and no structuring or succession patterns associated with the environmental conditions could be detected. Statistically significant (p < 0.05, rS ranging from −0.88 to 0.90) associations were found amongst the HAB species and other eukaryotic and prokaryotic species, including genera containing growth-limiting bacteria. However, significant correlations between species differed amongst the years, indicating that variability in environmental conditions between the years may have a stronger influence on the microalgal community structure and interspecies interactions than the variability during the sampling season. The association rule-based time-series analysis allowed the detection of a previously reported negative relationship between Synechococcus sp. and Skeletonema sp. in nature. Overall, the results support the applicability of metabarcoding and HTS-based microalgae monitoring, as it facilitates more precise species identification compared to light microscopy, as well as provides input for investigating potential interactions amongst different species/groups through simultaneous detection of multiple species/genera.
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Kazmi SSUH, Yapa N, Karunarathna SC, Suwannarach N. Perceived Intensification in Harmful Algal Blooms Is a Wave of Cumulative Threat to the Aquatic Ecosystems. Biology 2022; 11:852. [PMID: 35741373 PMCID: PMC9220063 DOI: 10.3390/biology11060852] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 04/24/2022] [Revised: 05/20/2022] [Accepted: 05/28/2022] [Indexed: 12/03/2022]
Abstract
Simple Summary Harmful algal blooms (HABs) are a serious threat to aquatic environments. The intensive expansion of HABs across the world is a warning signal of environmental deterioration. Global climatic change enforced variations in environmental factors causing stressed environments in aquatic ecosystems that favor the occurrence, distribution, and persistence of HABs. Perceived intensification in HABs increases toxin production, affecting the ecological quality as well as serious consequences on organisms including humans. This review outlines the causes and impacts of harmful algal blooms, including algal toxicity, grazing defense, management, control measures, emerging technologies, and their limitations for controlling HABs in aquatic ecosystems. Abstract Aquatic pollution is considered a major threat to sustainable development across the world, and deterioration of aquatic ecosystems is caused usually by harmful algal blooms (HABs). In recent times, HABs have gained attention from scientists to better understand these phenomena given that these blooms are increasing in intensity and distribution with considerable impacts on aquatic ecosystems. Many exogenous factors such as variations in climatic patterns, eutrophication, wind blowing, dust storms, and upwelling of water currents form these blooms. Globally, the HAB formation is increasing the toxicity in the natural water sources, ultimately leading the deleterious and hazardous effects on the aquatic fauna and flora. This review summarizes the types of HABs with their potential effects, toxicity, grazing defense, human health impacts, management, and control of these harmful entities. This review offers a systematic approach towards the understanding of HABs, eliciting to rethink the increasing threat caused by HABs in aquatic ecosystems across the world. Therefore, to mitigate this increasing threat to aquatic environments, advanced scientific research in ecology and environmental sciences should be prioritized.
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Zhang Z, Wang J, Hu G, Huang J, Chen L, Yin Y, Cai Y, Shen X, Ji N. Isolation and characterization of an algicidal bacterium against the bloom-forming algae raphidophyte Heterosigma akashiwo. Environ Technol 2022:1-10. [PMID: 35099361 DOI: 10.1080/09593330.2022.2036250] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Accepted: 01/22/2022] [Indexed: 06/14/2023]
Abstract
Harmful algae blooms (HABs) have increased in intensity and frequency worldwide, causing negative effects on public health and marine ecosystems. This study isolated and identified the bloom causing species and its associated algicidal bacterium during a phytoplankton bloom in coastal waters of Lianyungang, China. Morphological observations and DNA barcoding analysis indicate that the studied phytoplankton bloom was caused by the raphidophyte Heterosigma akashiwo, and the algicidal bacterium, strain LD-B1, was identified as a species belonging to the genus Pseudoalteromonas. Furthermore, the algicidal effects of strain LD-B1 against H. akashiwo were characterized; revealing strain LD-B1 show strong algicidal activity against H. akashiwo. After 48 h of bacterium culture addition, the algicidal rate reached up to 98.8% with a 1% final volume rate. Moreover, our findings indicate strain LD-B1's extracellular compounds involved in algicidal activity are likely not proteinaceous. These findings indicate that the isolated strain, LD-B1, is a promising algicidal bacterium to control H. akashiwo blooms.
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Affiliation(s)
- Zhenzhen Zhang
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, People's Republic of China
- Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Ocean University, Lianyungang, People's Republic of China
| | - Junyue Wang
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, People's Republic of China
- Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Ocean University, Lianyungang, People's Republic of China
| | - Guangwei Hu
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, People's Republic of China
- Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Ocean University, Lianyungang, People's Republic of China
| | - Jinwang Huang
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, People's Republic of China
- Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Ocean University, Lianyungang, People's Republic of China
| | - Lei Chen
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, People's Republic of China
- Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Ocean University, Lianyungang, People's Republic of China
| | - Yue Yin
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, People's Republic of China
- Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Ocean University, Lianyungang, People's Republic of China
| | - Yuefeng Cai
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, People's Republic of China
- Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Ocean University, Lianyungang, People's Republic of China
| | - Xin Shen
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, People's Republic of China
- Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Ocean University, Lianyungang, People's Republic of China
| | - Nanjing Ji
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, People's Republic of China
- Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Ocean University, Lianyungang, People's Republic of China
- Jiangsu Marine Resources Development Research Institute, Lianyungang, People's Republic of China
- CAS Key Laboratory of Marine Ecology and Environmental Sciences, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, People's Republic of China
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Park BS, Park C, Shin Y, Yoon S, Han M, Kang Y. Different Algicidal Modes of the Two Bacteria Aeromonas bestiarum HYD0802-MK36 and Pseudomonas syringae KACC10292T against Harmful Cyanobacteria Microcystis aeruginosa. Toxins (Basel) 2022; 14:128. [PMID: 35202155 PMCID: PMC8875702 DOI: 10.3390/toxins14020128] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2022] [Revised: 02/05/2022] [Accepted: 02/07/2022] [Indexed: 02/01/2023] Open
Abstract
Blooms of harmful cyanobacteria Microcystis aeruginosa lead to an adverse effect on freshwater ecosystems, and thus extensive studies on the control of this cyanobacteria’s blooms have been conducted. Throughout this study, we have found that the two bacteria Aeromonas bestiarum HYD0802-MK36 and Pseudomonas syringae KACC10292T are capable of killing M. aeruginosa. Interestingly, these two bacteria showed different algicidal modes. Based on an algicidal range test using 15 algal species (target and non-target species), HYD0802-MK36 specifically attacked only target cyanobacteria M. aeruginosa, whereas the algicidal activity of KACC10292T appeared in a relatively broad algicidal range. HYD0802-MK36, as a direct attacker, killed M. aeruginosa cells when direct cell (bacterium)-to-cell (cyanobacteria) contact happens. KACC10292T, as an indirect attacker, released algicidal substance which is located in cytoplasm. Interestingly, algicidal activity of KACC10292T was enhanced according to co-cultivation with the host cyanobacteria, suggesting that quantity of algicidal substance released from this bacterium might be increased via interaction with the host cyanobacteria.
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Zhu X, Chen S, Luo G, Zheng W, Tian Y, Lei X, Yao L, Wu C, Xu H. A Novel Algicidal Bacterium, Microbulbifer sp. YX04, Triggered Oxidative Damage and Autophagic Cell Death in Phaeocystis globosa, Which Causes Harmful Algal Blooms. Microbiol Spectr 2022;:e0093421. [PMID: 35019679 DOI: 10.1128/spectrum.00934-21] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Phaeocystis globosa causes severe marine pollution by forming harmful algal blooms and releasing hemolytic toxins and is therefore harmful to marine ecosystems and aquaculture industries. In this study, Microbulbifer sp. YX04 exerted high algicidal activity against P. globosa by producing and secreting metabolites. The algicidal activity of the YX04 supernatant was stable after exposure to different temperatures (−80 to 100°C) and pH values (4 to 12) for 2 h, suggesting that algicidal substances could temporarily be stored under these temperature and pH value conditions. To explore the algicidal process and mechanism, morphological and structural changes, oxidative stress, photosynthesis, autophagic flux, and global gene expression were investigated. Biochemical analyses showed that the YX04 supernatant induced reactive oxygen species (ROS) overproduction, which caused lipid peroxidation and malondialdehyde (MDA) accumulation in P. globosa. Transmission electron microscopy (TEM) observation and the significant decrease in both maximum photochemical quantum yield (Fv/Fm) and relative electron transfer rate (rETR) indicated damage to thylakoid membranes and destruction of photosynthetic system function. Immunofluorescence, immunoblot, and TEM analyses indicated that cellular damage caused autophagosome formation and triggered large-scale autophagic flux in P. globosa. Transcriptome analysis revealed many P. globosa genes that were differentially expressed in response to YX04 stress, most of which were involved in photosynthesis, respiration, cytoskeleton, microtubule, and autophagosome formation and fusion processes, which may trigger autophagic cell death. In addition to P. globosa, the YX04 supernatant showed high algicidal activity against Thalassiosira pseudonana, Thalassiosira weissflogii, Skeletonema costatum, Heterosigma akashiwo, and Prorocentrum donghaiense. This study highlights multiple mechanisms underlying YX04 supernatant toxicity toward P. globosa and its potential for controlling the occurrence of harmful algal blooms. IMPORTANCEP. globosa is one of the most notorious harmful algal bloom (HAB)-causing species, which can secrete hemolytic toxins, frequently cause serious ecological pollution, and pose a health hazard to animals and humans. Hence, screening for bacteria with high algicidal activity against P. globosa and studies on the algicidal characteristics and mechanism will contribute to providing an ecofriendly microorganism-controlling agent for preventing the occurrence of algal blooms and reducing the harm of algal blooms to the environment. Our study first reported the algicidal characteristic and mechanism of Microbulbifer sp. YX04 against P. globosa and demonstrated that P. globosa shows different response mechanisms, including movement ability, antioxidative systems, photosynthetic systems, gene expression, and cell death mode, to adapt to the adverse environment when algicidal compounds are present.
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Altuğ G, Çiftçi Türetken PS, Kalkan S, Topaloğlu B. The Distribution and Antibacterial Activity of Marine Sponge-Associated Bacteria in the Aegean Sea and the Sea of Marmara, Turkey. Curr Microbiol 2021; 78:2275-2290. [PMID: 33929605 DOI: 10.1007/s00284-021-02489-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Accepted: 02/07/2021] [Indexed: 11/30/2022]
Abstract
The distribution and antibacterial activities of bacteria isolated from fifty-five marine sponge samples collected from the Aegean Sea and the Sea of Marmara were investigated in the period between 2011 and 2013. The antibacterial activities of the methanolic extracts of marine sponge-associated bacteria tested against six pathogenic bacteria: Staphylococcus aureus SA1 and SA2, Brucella melitensis B37, Vibrio vulnificus GK23, Escherichia coli O157:H7 (ATCC 35150), and Salmonella enterica subsp. enterica serovar typhi (ATCC 167), using disk diffusion tests and minimum inhibitory concentration technique. The bacteria isolated from sponges and ambient seawater samples were identified using VITEK 2 Compact 30 automated microbial identification system. All bacterial extracts were exhibited antibacterial activity with various MIC values ranging from 7.8 mg/ mL to 1000 mg/mL against all pathogenic bacteria tested. The antibacterial efficacy rates found to be higher in the Aegean Sea than the Sea of Marmara samples. Fifty-five sponge samples belonging to fifteen species and host twenty-two bacterial species belonging to seven classes in two different marine areas at varying rates were detected. The most common sponge-associated bacterium was recorded as Sphingomonas paucimobilis and Bacillus cereus in the Aegean Sea and the Sea of Marmara, respectively. The composition and counts of the sponge-associated bacteria were found significantly higher than the free-living bacteria in the ambient sea water sampling points of both two marine areas. The presence of high antibacterial potential of sponge-related bacteria obtained in this study provided data for further studies on marine-derived antimicrobial agents, including the effects of environmental differences.
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Affiliation(s)
- Gülşen Altuğ
- Department of Marine Biology, Faculty of Aquatic Science, Istanbul University, Ordu Street, No 8, Laleli, 34470, Istanbul, Turkey.
| | - Pelin S Çiftçi Türetken
- Department of Marine Biology, Faculty of Aquatic Science, Istanbul University, Ordu Street, No 8, Laleli, 34470, Istanbul, Turkey
| | - Samet Kalkan
- Department of Marine Biology, Faculty of Fisheries, Recep Tayyip Erdogan University, Rize, Turkey
| | - Bülent Topaloğlu
- Department of Marine Biology, Faculty of Aquatic Science, Istanbul University, Ordu Street, No 8, Laleli, 34470, Istanbul, Turkey
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14
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Jeong SY, Son HJ. Effects of mycosubtilin homolog algicides from a marine bacterium, Bacillus sp. SY-1, against the harmful algal bloom species Cochlodinium polykrikoides. J Microbiol 2021; 59:389-400. [PMID: 33779952 DOI: 10.1007/s12275-021-1086-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2021] [Revised: 02/25/2021] [Accepted: 02/25/2021] [Indexed: 11/28/2022]
Abstract
The marine bacterium, Bacillus sp. SY-1, produced algicidal compounds that are notably active against the bloom-forming alga Cochlodinium polykrikoides. We isolated three algicidal compounds and identified these as mycosubtilins with molecular weights of 1056, 1070, and 1084 (designated MS 1056, 1070, and 1084, respectively), based on amino acid analyses and 1H, 13C, and two-dimensional nuclear magnetic resonance spectroscopy, including 1H-15N heteronuclear multiple bond correlation analysis. MS 1056 contains a β-amino acid residue with an alkyl side chain of C15, which has not previously been seen in known mycosubtilin families. MS 1056, 1070, and 1084 showed algicidal activities against C. polykrikoides with 6-h LC50 values of 2.3 ± 0.4, 0.8 ± 0.2, and 0.6 ± 0.1 μg/ml, respectively. These compounds also showed significant algicidal activities against other harmful algal bloom species. In contrast, MS 1084 showed no significant growth inhibitory effects against other organisms, including bacteria and microalgae, although does inhibit the growth of some fungi and yeasts. These observations imply that the algicidal bacterium Bacillus sp. SY-1 and its algicidal compounds could play an important role in regulating the onset and development of harmful algal blooms in natural environments.
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Affiliation(s)
- Seong-Yun Jeong
- Department of Biomedical, Daegu Catholic University, Gyengsan, 38430, Republic of Korea
| | - Hong-Joo Son
- College of Natural Resources and Life Science, Pusan National University, Miryang, 50463, Republic of Korea.
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15
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Roux P, Siano R, Collin K, Bilien G, Sinquin C, Marchand L, Zykwinska A, Delbarre-Ladrat C, Schapira M. Bacteria enhance the production of extracellular polymeric substances by the green dinoflagellate Lepidodinium chlorophorum. Sci Rep 2021; 11:4795. [PMID: 33637819 PMCID: PMC7910647 DOI: 10.1038/s41598-021-84253-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Accepted: 02/03/2021] [Indexed: 11/22/2022] Open
Abstract
High biomasses of the marine dinoflagellate Lepidodinium chlorophorum cause green seawater discolorations along Southern Brittany (NE Atlantic, France). The viscosity associated to these phenomena has been related to problems in oyster cultivation. The harmful effect of L. chlorophorum might originate from the secretion of Extracellular Polymeric Substances (EPS). To understand whether the EPS are produced by L. chlorophorum or its associated bacteria, or if they are a product of their interaction, batch cultures were performed under non-axenic and pseudo-axenic conditions for three strains. Maximum dinoflagellate cell abundances were observed in pseudo-axenic cultures. The non-sinking fraction of polymers (Soluble Extracellular Polymers, SEP), mainly composed of proteins and the exopolysaccharide sulphated galactan, slightly increased in pseudo-axenic cultures. The amount of Transparent Exopolymer Particles (TEP) per cell increased under non-axenic conditions. Despite the high concentrations of Particulate Organic Carbon (POC) measured, viscosity did not vary. These results suggest that the L. chlorophorum-bacteria interaction could have a detrimental consequence on the dinoflagellate, translating in a negative effect on L. chlorophorum growth, as well as EPS overproduction by the dinoflagellate, at concentrations that should not affect seawater viscosity.
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16
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Simons VE, Coyne KJ, Warner ME, Dolan MM, Cohen JH. Effects of a bacteria-produced algicide on non-target marine invertebrate species. Sci Rep 2021; 11:583. [PMID: 33436753 DOI: 10.1038/s41598-020-79814-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2020] [Accepted: 12/09/2020] [Indexed: 01/29/2023] Open
Abstract
Harmful algal blooms (HABs) affect both freshwater and marine systems. Laboratory experiments suggest an exudate produced by the bacterium Shewanella sp. IRI-160 could be used to prevent or mitigate dinoflagellate blooms; however, effects on non-target organisms are unknown. The algicide (IRI-160AA) was tested on various ontogenetic stages of the copepod Acartia tonsa (nauplii and adult copepodites), the blue crab Callinectes sapidus (zoea larvae and megalopa postlarvae), and the eastern oyster Crassostrea virginica (pediveliger larvae and adults). Mortality experiments with A. tonsa revealed that the 24-h LC50 was 13.4% v/v algicide for adult females and 5.96% for early-stage nauplii. For C. sapidus, the 24-h LC50 for first-stage zoeae was 16.8%; results were not significant for megalopae or oysters. Respiration rates for copepod nauplii increased in the 11% concentration, and in the 11% and 17% concentrations for crab zoeae; rates of later stages and oysters were unaffected. Activity level was affected for crab zoeae in the 1%, 11%, and 17% treatments, and for oyster pediveliger larvae at the 17% level. Activity of later stages and of adult copepods was unaffected. Smaller, non-target biota with higher surface to volume could be negatively impacted from IRI-160AA dosing, but overall the taxa and stages assayed were tolerant to the algicide at concentrations required for dinoflagellate mortality (EC50 = ~ 1%).
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17
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Kempnich MW, Sison-Mangus MP. Presence and abundance of bacteria with the Type VI secretion system in a coastal environment and in the global oceans. PLoS One 2020; 15:e0244217. [PMID: 33351849 PMCID: PMC7755280 DOI: 10.1371/journal.pone.0244217] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2020] [Accepted: 12/04/2020] [Indexed: 01/13/2023] Open
Abstract
Marine bacteria employ various strategies to maintain their competitive advantage over others in a mixed community. The use of Type VI Secretion Systems (T6SS), a protein secretion apparatus used as a molecular weapon for interbacterial competition and eukaryotic interactions, is one of the competitive strategies that is least studied among heterotrophic bacteria living in the water column. To get an insight into the temporal and spatial distribution of bacteria with T6SS in this portion of the marine environment, we examine the presence and abundance of T6SS-bearing bacteria at both local and global scales through the use of metagenome data from water samples obtained from the coast of Monterey Bay and the TARA Oceans project. We also track the abundance of T6SS-harboring bacteria through a two-year time series of weekly water samples in the same coastal site to examine the environmental factors that may drive their presence and abundance. Among the twenty-one T6SS-bearing bacterial genera examined, we found several genera assume a particle-attached lifestyle, with only a few genera having a free-living lifestyle. The abundance of T6SS-harboring bacteria in both niches negatively correlates with the abundance of autotrophs. Globally, we found that T6SS genes are much more abundant in areas with low biological productivity. Our data suggest that T6SS-harboring bacteria tend to be abundant spatially and temporally when organic resources are limited. This ecological study agrees with the patterns observed from several in vitro studies; that T6SS could be an adaptive strategy employed by heterotrophic bacteria to obtain nutrients or reduce competition when resources are in limited quantity.
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Affiliation(s)
- Michael W. Kempnich
- Department of Ocean Sciences and Institute of Marine Sciences, University of California, Santa Cruz, Santa Cruz, California, United States of America
| | - Marilou P. Sison-Mangus
- Department of Ocean Sciences and Institute of Marine Sciences, University of California, Santa Cruz, Santa Cruz, California, United States of America
- * E-mail:
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Ali S, Jenkins B, Cheng J, Lobb B, Wei X, Egan S, Charles TC, McConkey BJ, Austin J, Doxey AC. Slr4, a newly identified S-layer protein from marine Gammaproteobacteria, is a major biofilm matrix component. Mol Microbiol 2020; 114:979-990. [PMID: 32804439 PMCID: PMC7821379 DOI: 10.1111/mmi.14588] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2020] [Revised: 08/06/2020] [Indexed: 01/03/2023]
Abstract
S‐layers are paracrystalline proteinaceous lattices that surround prokaryotic cells, forming a critical interface between the cells and their extracellular environment. Here, we report the discovery of a novel S‐layer protein present in the Gram‐negative marine organism, Pseudoalteromonas tunicata D2. An uncharacterized protein (EAR28894) was identified as the most abundant protein in planktonic cultures and biofilms. Bioinformatic methods predicted a beta‐helical structure for EAR28894 similar to the Caulobacter S‐layer protein, RsaA, despite sharing less than 20% sequence identity. Transmission electron microscopy revealed that purified EAR28894 protein assembled into paracrystalline sheets with a unique square lattice symmetry and a unit cell spacing of ~9.1 nm. An S‐layer was found surrounding the outer membrane in wild‐type cells and completely removed from cells in an EAR28894 deletion mutant. S‐layer material also appeared to be “shed” from wild‐type cells and was highly abundant in the extracellular matrix where it is associated with outer membrane vesicles and other matrix components. EAR28894 and its homologs form a new family of S‐layer proteins that are widely distributed in Gammaproteobacteria including species of Pseudoalteromonas and Vibrio, and found exclusively in marine metagenomes. We propose the name Slr4 for this novel protein family.
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Affiliation(s)
- Sura Ali
- Department of Biology, University of Waterloo, Waterloo, ON, Canada
| | - Benjamin Jenkins
- Department of Biology, University of Waterloo, Waterloo, ON, Canada
| | - Jiujun Cheng
- Department of Biology, University of Waterloo, Waterloo, ON, Canada.,Metagenom Bio Life Science Inc., Waterloo, ON, Canada
| | - Briallen Lobb
- Department of Biology, University of Waterloo, Waterloo, ON, Canada
| | - Xin Wei
- Department of Biology, University of Waterloo, Waterloo, ON, Canada
| | - Suhelen Egan
- Centre for Marine Science and Innovation and School of Biological, Earth and Environmental Sciences, The University of New South Wales Sydney, Sydney, NSW, Australia
| | - Trevor C Charles
- Department of Biology, University of Waterloo, Waterloo, ON, Canada.,Metagenom Bio Life Science Inc., Waterloo, ON, Canada
| | | | - John Austin
- Bureau of Microbial Hazards, Health Products and Food Branch, Health Canada, Ottawa, ON, Canada
| | - Andrew C Doxey
- Department of Biology, University of Waterloo, Waterloo, ON, Canada
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19
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Pal M, Yesankar PJ, Dwivedi A, Qureshi A. Biotic control of harmful algal blooms (HABs): A brief review. J Environ Manage 2020; 268:110687. [PMID: 32383649 DOI: 10.1016/j.jenvman.2020.110687] [Citation(s) in RCA: 63] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2020] [Revised: 04/14/2020] [Accepted: 04/30/2020] [Indexed: 06/11/2023]
Abstract
The water bodies, mainly coastal and lake, remain tainted worldwide, mostly because of the Cyanobacteria harbored in Harmful Algal Blooms (HABs). The main reason for the flourishing of blooms depends on the eutrophication. Blooms could be toxic as well as non-toxic, depending on the bloom-forming species. The blooms affect the water body, aquatic ecosystem and also dependents like human. A large number of organisms, including bacteria, viruses, fungi, fish and zooplankton have adverse effects on Cyanobacteria either through infection, predation or by the production of the algicidal compounds. It was reported, these microorganisms have species-specific interactions and hence differ in their interaction mechanism. The present review emphasises on the role of selected microbial species and the mechanism they follow for mitigation of HABs. Generally lab-scale entities were reported to involve lytic agents, like cyanobacteriolytic substances, released by bacteria. Cyanobacterial species release Cyanotoxins which may affect the water quality. Growing biotic factors in a large quantity and discharging it into the water-body needs excessive efficacy and economic requisite and hence the feasibility of extrapolation of the laboratory results in the field still finds promiscuity towards mitigation of HABs.
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Affiliation(s)
- Mili Pal
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India; Environmental Biotechnology and Genomics Division (EBGD), CSIR - National Environmental Engineering Research Institute (CSIR-NEERI) Nehru Marg, Nagpur 440020, India
| | - Prerna J Yesankar
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India; Environmental Biotechnology and Genomics Division (EBGD), CSIR - National Environmental Engineering Research Institute (CSIR-NEERI) Nehru Marg, Nagpur 440020, India
| | - Ajay Dwivedi
- Environmental Impact and Sustainability Division, CSIR-NEERI, Nagpur, India
| | - Asifa Qureshi
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India; Environmental Biotechnology and Genomics Division (EBGD), CSIR - National Environmental Engineering Research Institute (CSIR-NEERI) Nehru Marg, Nagpur 440020, India.
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20
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Inaba N, Kodama I, Nagai S, Shiraishi T, Matsuno K, Yamaguchi A, Imai I. Distribution of Harmful Algal Growth-Limiting Bacteria on Artificially Introduced Ulva and Natural Macroalgal Beds. Applied Sciences 2020; 10:5658. [DOI: 10.3390/app10165658] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
The intensity and frequency of harmful algal blooms (HABs) have increased, posing a threat to human seafood resources due to massive kills of cultured fish and toxin contamination of bivalves. In recent years, bacteria that inhibit the growth of HAB species were found to be densely populated on the biofilms of some macroalgal species, indicating the possible biological control of HABs by the artificial introduction of macroalgal beds. In this study, an artificially created Ulva pertusa bed using mobile floating cages and a natural macroalgal bed were studied to elucidate the distribution of algal growth-limiting bacteria (GLB). The density of GLB affecting fish-killing raphidophyte Chattonella antiqua, and two harmful dinoflagellates, were detected between 106 and 107 CFU g−1 wet weight on the biofilm of artificially introduced U. pertusa and 10 to 102 CFU mL−1 from adjacent seawater; however, GLB found from natural macroalgal species targeted all tested HAB species (five species), ranging between 105 and 106 CFU g−1 wet weight in density. These findings provide new ecological insights of GLB at macroalgal beds, and concurrently demonstrate the possible biological control of HABs by artificially introduced Ulva beds.
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21
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Heo J, Cho K, Kim U, Cho DH, Ko S, Tran QG, Lee YJ, Ryu CM, Kim HS. Genome-wide high-throughput screening of interactive bacterial metabolite in the algal population using Escherichia coli K-12 Keio collection. Sci Rep 2020; 10:10647. [PMID: 32606320 PMCID: PMC7327039 DOI: 10.1038/s41598-020-67322-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2020] [Accepted: 06/05/2020] [Indexed: 11/09/2022] Open
Abstract
Algae-bacteria interaction is one of the main factors underlying the formation of harmful algal blooms (HABs). The aim of this study was to develop a genome-wide high-throughput screening method to identify HAB-influenced specific interactive bacterial metabolites using a comprehensive collection of gene-disrupted E. coli K-12 mutants (Keio collection). The screening revealed that a total of 80 gene knockout mutants in E. coli K-12 resulted in an approximately 1.5-fold increase in algal growth relative to that in wild-type E. coli. Five bacterial genes (lpxL, lpxM, kdsC, kdsD, gmhB) involved in the lipopolysaccharide (LPS) (or lipooligosaccharide, LOS) biosynthesis were identified from the screen. Relatively lower levels of LPS were detected in these bacteria compared to that in the wild-type. Moreover, the concentration-dependent decrease in microalgal growth after synthetic LPS supplementation indicated that LPS inhibits algal growth. LPS supplementation increased the 2,7-dichlorodihydrofluorescein diacetate fluorescence, as well as the levels of lipid peroxidation-mediated malondialdehyde formation, in a concentration-dependent manner, indicating that oxidative stress can result from LPS supplementation. Furthermore, supplementation with LPS also remarkably reduced the growth of diverse bloom-forming dinoflagellates and green algae. Our findings indicate that the Keio collection-based high-throughput in vitro screening is an effective approach for the identification of interactive bacterial metabolites and related genes.
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Affiliation(s)
- Jina Heo
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea.,Department of Environmental Biotechnology, KRIBB School of Biotechnology, Korea University of Science and Technology (UST), Daejeon, 34113, Republic of Korea
| | - Kichul Cho
- Department of Applied Marine Bioresource Science, National Marine Biodiversity Institute of Korea (MABIK), Seocheon-gun, 33662, Republic of Korea
| | - Urim Kim
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea.,Department of Environmental Biotechnology, KRIBB School of Biotechnology, Korea University of Science and Technology (UST), Daejeon, 34113, Republic of Korea
| | - Dae-Hyun Cho
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea
| | - Sora Ko
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea
| | - Quynh-Giao Tran
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea.,Department of Environmental Biotechnology, KRIBB School of Biotechnology, Korea University of Science and Technology (UST), Daejeon, 34113, Republic of Korea
| | - Yong Jae Lee
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea
| | - Choong-Min Ryu
- Molecular Phytobacteriology Laboratory, Infectious Disease Research Center, KRIBB, Daejeon, 34141, Republic of Korea.,Department of Biosystems and Bioengineering, KRIBB School of Biotechnology, Korea University of Science and Technology (UST), Daejeon, 34113, Republic of Korea
| | - Hee-Sik Kim
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea. .,Department of Environmental Biotechnology, KRIBB School of Biotechnology, Korea University of Science and Technology (UST), Daejeon, 34113, Republic of Korea.
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Zeng G, Zhang M, Gao P, Wang J, Sun D. Algicidal Efficiency and Genotoxic Effects of Phanerochaete chrysosporium against Microcystis aeruginosa. Int J Environ Res Public Health 2020; 17:ijerph17114029. [PMID: 32517048 PMCID: PMC7312622 DOI: 10.3390/ijerph17114029] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/05/2020] [Revised: 05/29/2020] [Accepted: 05/30/2020] [Indexed: 11/16/2022]
Abstract
Eutrophication has become a severe environmental problem. This study evaluated the algicidal efficiency and genotoxic effects of Microcystis aeruginosa co-cultured with Phanerochaete chrysosporium for 48 h under the optimum conditions of 250 mg/L of P. chrysosporium at 25 °C with dissolved oxygen content of 7.0 mg/L. The results showed that the activity of algal dehydrogenase, superoxide dismutase, and peroxidase were all decreased and the malondialdehyde content increased after co-culturing. Fourier transform infrared spectroscopy and scanning electron microscopy observations showed that the functional group and structure of algal cells were significantly changed. Compared with those of control tadpoles, blood cells of Fejervarya multistriata tadpoles had increased micronucleus frequency (from 1.05 ± 0.09 to 1.99 ± 0.05) and abnormal nuclei (from 2.45 ± 0.06 to 5.83 ± 0.07). The tail length of M. aeruginosa co-cultured with P. chrysosporium increased from 1.12 ± 0.21 to 21.68 ± 0.34, and the comet length increased from 6.45 ± 0.09 to 36.45 ± 0.67 within 48 h. Micronucleus assay and Comet assay results demonstrated that P. chrysosporium might effectively remove algae and reduce genotoxic effects and may be safe for aquatic ecosystems.
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Affiliation(s)
- Guoming Zeng
- Chongqing Engineering Laboratory of Nano/Micro Biological Medicine Detection Technology, School of Architecture and Engineering, Chongqing University of Science and Technology, Chongqing 401331, China; (G.Z.); (M.Z.); (P.G.); (J.W.)
| | - Maolan Zhang
- Chongqing Engineering Laboratory of Nano/Micro Biological Medicine Detection Technology, School of Architecture and Engineering, Chongqing University of Science and Technology, Chongqing 401331, China; (G.Z.); (M.Z.); (P.G.); (J.W.)
| | - Pei Gao
- Chongqing Engineering Laboratory of Nano/Micro Biological Medicine Detection Technology, School of Architecture and Engineering, Chongqing University of Science and Technology, Chongqing 401331, China; (G.Z.); (M.Z.); (P.G.); (J.W.)
| | - Jiale Wang
- Chongqing Engineering Laboratory of Nano/Micro Biological Medicine Detection Technology, School of Architecture and Engineering, Chongqing University of Science and Technology, Chongqing 401331, China; (G.Z.); (M.Z.); (P.G.); (J.W.)
| | - Da Sun
- Institute of Life Sciences & Biomedicine Collaborative Innovation Center, Wenzhou University, Wenzhou 325035, China
- Correspondence: ; Tel./Fax: +86-173-6586-6501
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Vera-Villalobos H, Pérez V, Contreras F, Alcayaga V, Avalos V, Riquelme C, Silva-Aciares F. Characterization and removal of biofouling from reverse osmosis membranes (ROMs) from a desalination plant in Northern Chile, using Alteromonas sp. Ni1-LEM supernatant. Biofouling 2020; 36:505-515. [PMID: 32545993 DOI: 10.1080/08927014.2020.1776268] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Revised: 05/21/2020] [Accepted: 05/24/2020] [Indexed: 06/11/2023]
Abstract
Biofouling control in reverse osmosis membranes (ROMs) is challenging due to the high cost of treatments, and reduction in the life of ROMs. This study characterizes the biofouling in the ROMs from a desalination plant and reports its effective removal using the supernatant obtained from Alteromonas sp. strain Ni1-LEM. The characterization of the bacterial community revealed that the most abundant taxa in ROMs were the genera Fulvivirga and Pseudoalteromonas, and unclassified species of the families Flavobacteriaceae and Sphingomonadaceae. This bacterial community significantly decreased upon treatment with the supernatant from Alteromonas sp. Ni1-LEM, resulting in the prevalence of the genus Pseudoalteromonas. Furthermore, this bacterial supernatant significantly inhibited cell adhesion of seven benthic microalgae isolated from ROMs as well as promoting cell detachment of the existing microbial biofilms. The study showed that the extracellular supernatant modified the conformation of extracellular polymeric substances (EPS) in the biofouling of ROMs without any biocidal effects.
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Affiliation(s)
- Hernán Vera-Villalobos
- Laboratorio de Ecología Microbiana, Centro de Bioinnovación, Facultad de Ciencias del mar y recursos biológicos, Universidad de Antofagasta, Antofagasta, Chile
| | - Vilma Pérez
- Australian Centre for Ancient DNA, School of Biological Sciences, University of Adelaide, Adelaide, Australia
| | - Francisco Contreras
- Laboratorio de Ecología Microbiana, Centro de Bioinnovación, Facultad de Ciencias del mar y recursos biológicos, Universidad de Antofagasta, Antofagasta, Chile
| | - Valezka Alcayaga
- Laboratorio de Ecología Microbiana, Centro de Bioinnovación, Facultad de Ciencias del mar y recursos biológicos, Universidad de Antofagasta, Antofagasta, Chile
| | - Vladimir Avalos
- Laboratorio de Ecología Microbiana, Centro de Bioinnovación, Facultad de Ciencias del mar y recursos biológicos, Universidad de Antofagasta, Antofagasta, Chile
| | - Carlos Riquelme
- Laboratorio de Ecología Microbiana, Centro de Bioinnovación, Facultad de Ciencias del mar y recursos biológicos, Universidad de Antofagasta, Antofagasta, Chile
- Unidad de Microbiología Aplicada, Centro de Bioinnovación, Facultad de Ciencias del mar y recursos biológicos, Universidad de Antofagasta, Antofagasta, Chile
| | - Fernando Silva-Aciares
- Unidad de Microbiología Aplicada, Centro de Bioinnovación, Facultad de Ciencias del mar y recursos biológicos, Universidad de Antofagasta, Antofagasta, Chile
- Departamento de Biotecnología, Universidad de Antofagasta, Antofagasta, Chile
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Li J, Wang T, Yu S, Bai J, Qin S. Community characteristics and ecological roles of bacterial biofilms associated with various algal settlements on coastal reefs. J Environ Manage 2019; 250:109459. [PMID: 31479939 DOI: 10.1016/j.jenvman.2019.109459] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2019] [Revised: 07/20/2019] [Accepted: 08/21/2019] [Indexed: 06/10/2023]
Abstract
Bacterial biofilms, which are a group of bacteria attaching to and ultimately forming communities on reefs, perform essential ecological functions in coastal ecosystems. Particularly, they may attract or repulse the settling down of opportunistic algae. However, this phenomenon and the interaction mechanism are not fully understood. This study investigated reefs from the Changdao coastal zone to determine the structures and functions of bacterial biofilms symbiosing with various algae using high-throughput sequencing analysis. The Shannon diversity index of microbiota with algal symbiosis reached 5.34, which was higher than that of microbiota wherein algae were absent (4.80). The beta diversity results for 11 samples revealed that there existed a separation between bacterial communities on reefs with and without attached algae, while communities with similar algae clustered together. The taxa mostly associated with algae-symbiotic microbiota are the Actinobacteria phylum, and the Flavobacteriia and Gammaproteobacteria classes. The Cyanobacteria phylum was not associated with algae-symbiotic microbiota. As revealed by functional analysis, the bacteria mostly involved in the metabolism of sulfur were represented by brown and red algae in the biofilm symbiosis. Bacteria related to the metabolism of certain trace elements were observed only in specific groups. Moreover, phototrophy-related bacteria were less abundant in samples coexisting with algae. This study established the link between bacterial biofilms and algal settlements on costal reefs, and revealed the possible holobiont relationship between them. This may provide new technical directions toward realizing algal cultivation and management during the construction of artificial reef ecosystems.
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Affiliation(s)
- Jialin Li
- Key Lab of Coastal Biology and Biological Resource Utilization, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264000, Shandong, China; Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, 266071, China
| | - Ting Wang
- College of Environmental Science and Engineering, Ocean University of China, Qingdao, 266100, China; Key Lab of Marine Environmental Science and Ecology, Ministry of Education, Ocean University of China, Qingdao, 266100, China
| | - Shuxian Yu
- Key Lab of Coastal Biology and Biological Resource Utilization, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264000, Shandong, China
| | - Jie Bai
- College of Environmental Science and Engineering, Ocean University of China, Qingdao, 266100, China; Key Lab of Marine Environmental Science and Ecology, Ministry of Education, Ocean University of China, Qingdao, 266100, China.
| | - Song Qin
- Key Lab of Coastal Biology and Biological Resource Utilization, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264000, Shandong, China; Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, 266071, China.
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Inaba N, Trainer VL, Nagai S, Kojima S, Sakami T, Takagi S, Imai I. Dynamics of seagrass bed microbial communities in artificial Chattonella blooms: A laboratory microcosm study. Harmful Algae 2019; 84:139-150. [PMID: 31128798 DOI: 10.1016/j.hal.2018.12.004] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2017] [Revised: 12/17/2018] [Accepted: 12/17/2018] [Indexed: 06/09/2023]
Abstract
The influence of algicidal and growth-inhibiting bacteria in a seagrass (Zostera marina) bed, and their capability of controlling blooms of the fish-killing raphidophyte flagellate, Chattonella antiqua, were examined in laboratory microcosm experiments. Bacterial communities in seawater collected from the seagrass bed and Z. marina biofilm suppressed artificial Chattonella blooms in the presence of their natural competitors and predators. Phylogenetic analysis suggest that considerable numbers of bacteria that suppress Chattonella, including algicidal or growth-inhibiting bacteria isolated from seagrass biofilm and seawater from the seagrass bed, are members of Proteobacteria that can decompose lignocellulosic compounds. A direct comparison of partial 16S rRNA gene sequences (500 bp) revealed that the growth-limiting bacterium (strain ZM101) isolated from Z. marina biofilm belonged to the genus Phaeobacter (Alphaproteobacteria) showed 100% similarity with strains of growth-limiting bacteria isolated from seawater of both the seagrass bed and nearshore region, suggesting that the origin of these growth-limiting bacteria are the seagrass biofilm or seawater surrounding the seagrass bed. This study demonstrates that Chattonella growth-limiting bacteria living on seagrass biofilm and in the adjacent seawater can suppress Chattonella blooms, suggesting the possibility of Chattonella bloom prevention through restoration, protection, or introduction of seagrass in coastal areas.
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Affiliation(s)
- Nobuharu Inaba
- Civil Engineering Research Institute for Cold Region, Public Works Research Institute, Hiragishi 1-3-1-34, Toyohira-ku, Sapporo, Hokkaido, 062-8602, Japan.
| | - Vera L Trainer
- Environmental and Fisheries Science Division, Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, 2725 Montlake Blvd. E., Seattle, WA, 98112, United States
| | - Satoshi Nagai
- National Research Institute of Fisheries Science, Japan Fisheries Research and Education Agency, 2-12-4 Fukuura, Kanazawa-ku, Yokohama, Kanagawa 236-8648, Japan
| | - Senri Kojima
- Plankton Laboratory, Graduate School of Fisheries Sciences, Hokkaido University, 3-1-1 Minato-cho Hokkaido, Hakodate, 041-8611, Japan
| | - Tomoko Sakami
- National Research Institute of Aquaculture, Japan Fisheries Research and Education Agency, 422-1 Nakatsuhama-ura, Minami-ise, Mie 516-0193, Japan
| | - Shuzo Takagi
- Research Institute for Fisheries Science, Okayama Prefectural Technology Center for Agriculture, Forestry and Fisheries, Kashino 6641-6, Ushimado, Setouchi, Okayama 701-4303, Japan
| | - Ichiro Imai
- Plankton Laboratory, Graduate School of Fisheries Sciences, Hokkaido University, 3-1-1 Minato-cho Hokkaido, Hakodate, 041-8611, Japan
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Chiellini C, Pasqualetti C, Lanzoni O, Fagorzi C, Bazzocchi C, Fani R, Petroni G, Modeo L. Harmful Effect of Rheinheimera sp. EpRS3 ( Gammaproteobacteria) Against the Protist Euplotes aediculatus (Ciliophora, Spirotrichea): Insights Into the Ecological Role of Antimicrobial Compounds From Environmental Bacterial Strains. Front Microbiol 2019; 10:510. [PMID: 31001206 PMCID: PMC6457097 DOI: 10.3389/fmicb.2019.00510] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2018] [Accepted: 02/27/2019] [Indexed: 01/24/2023] Open
Abstract
Rheinheimera sp. strain EpRS3, isolated from the rhizosphere of Echinacea purpurea, is already known for its ability to produce antibacterial compounds. By use of culture experiments, we verified and demonstrated its harmful effect against the ciliated protist Euplotes aediculatus (strain EASCc1), which by FISH experiments resulted to harbor in its cytoplasm the obligate bacterial endosymbiont Polynucleobacter necessarius (Betaproteobacteria) and the secondary endosymbiont "Candidatus Nebulobacter yamunensis" (Gammaproteobacteria). In culture experiments, the number of ciliates treated both with liquid broth bacteria-free (Supernatant treatment) and bacteria plus medium (Tq treatment), decreases with respect to control cells, with complete disappearance of ciliates within 6 h after Tq treatment. Results suggest that Rheinheimera sp. EpRS3 produces and releases in liquid culture one or more bioactive molecules affecting E. aediculatus survival. TEM analysis of control (not treated) ciliates allowed to morphologically characterize both kind of E. aediculatus endosymbionts. In treated ciliates, collected soon after the arising of cell suffering leading to death, TEM observations revealed some ultrastructural damages, indicating that P. necessarius endosymbionts went into degradation and vacuolization after both Supernatant and Tq treatments. Additionally, TEM investigation showed that when the ciliate culture was inoculated with Tq treatment, both a notable decrease of P. necessarius number and an increase of damaged and degraded mitochondria occur. FISH experiments performed on treated ciliates confirmed TEM results and, by means of the specific probe herein designed, disclosed the presence of Rheinheimera sp. EpRS3 both inside phagosomes and free in cytoplasm in ciliates after Tq treatment. This finding suggests a putative ability of Rheinheimera sp. EpRS3 to reintroduce itself in the environment avoiding ciliate digestion.
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Affiliation(s)
| | | | | | - Camilla Fagorzi
- Department of Biology, University of Florence, Florence, Italy
| | - Chiara Bazzocchi
- Department of Veterinary Medicine, University of Milan, Milan, Italy
| | - Renato Fani
- Department of Biology, University of Florence, Florence, Italy
| | | | - Letizia Modeo
- Department of Biology, University of Pisa, Pisa, Italy
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Whalen KE, Kirby C, Nicholson RM, O'Reilly M, Moore BS, Harvey EL. The chemical cue tetrabromopyrrole induces rapid cellular stress and mortality in phytoplankton. Sci Rep 2018; 8:15498. [PMID: 30341338 DOI: 10.1038/s41598-018-33945-3] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2018] [Accepted: 10/04/2018] [Indexed: 02/08/2023] Open
Abstract
Eukaryotic phytoplankton contribute to the flow of elements through marine food webs, biogeochemical cycles, and Earth's climate. Therefore, how phytoplankton die is a critical determinate of the flow and fate of nutrients. While heterotroph grazing and viral infection contribute to phytoplankton mortality, recent evidence suggests that bacteria-derived cues also control phytoplankton lysis. Here, we report exposure to nanomolar concentrations of 2,3,4,5-tetrabromopyrrole (TBP), a brominated chemical cue synthesized by marine γ-proteobacteria, resulted in mortality of seven phylogenetically-diverse phytoplankton species. A comparison of nine compounds of marine-origin containing a range of cyclic moieties and halogenation indicated that both a single pyrrole ring and increased bromination were most lethal to the coccolithophore, Emiliania huxleyi. TBP also rapidly induced the production of reactive oxygen species and the release of intracellular calcium stores, both of which can trigger the activation of cellular death pathways. Mining of the Ocean Gene Atlas indicated that TBP biosynthetic machinery is globally distributed throughout the water column in coastal areas. These findings suggest that bacterial cues play multiple functions in regulating phytoplankton communities by inducing biochemical changes associated with cellular death. Chemically-induced lysis by bacterial infochemicals is yet another variable that must be considered when modeling oceanic nutrient dynamics.
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Fuentes S, Arroyo JI, Rodríguez-Marconi S, Masotti I, Alarcón-Schumacher T, Polz MF, Trefault N, De la Iglesia R, Díez B. Summer phyto- and bacterioplankton communities during low and high productivity scenarios in the Western Antarctic Peninsula. Polar Biol 2018. [DOI: 10.1007/s00300-018-2411-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Huang X, Zhu J, Cai Z, Lao Y, Jin H, Yu K, Zhang B, Zhou J. Profiles of quorum sensing (QS)-related sequences in phycospheric microorganisms during a marine dinoflagellate bloom, as determined by a metagenomic approach. Microbiol Res 2018; 217:1-13. [PMID: 30384903 DOI: 10.1016/j.micres.2018.08.015] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2018] [Revised: 08/26/2018] [Accepted: 08/29/2018] [Indexed: 01/09/2023]
Abstract
The complicated relationships among environmental microorganisms are regulated by quorum sensing (QS). Understanding QS-based signals could shed light on the interactions between microbial communities in certain environments. Although QS characteristics have been widely discussed, few studies have been conducted on the role of QS in phycospheric microorganisms. Here, we used metagenomics to examine the profile of AI-1 (AinS, HdtS, LuxI) and AI-2 (LuxS) autoinducers from a deeply sequenced microbial database, obtained from a complete dinoflagellate bloom. A total of 3001 putative AI-1 homologs and 130 AI-2 homologs were identified. The predominant member among the AI groups was HdtS. The abundance of HdtS, AinS, and LuxS increased as the bloom developed, whereas the abundance of LuxI showed the opposite trend. Phylogenetic analysis suggested that HdtS and LuxI synthase originated mainly from alpha-, beta-, and gamma-Proteobacteria, whereas AinS synthase originated solely from Vibrionales. In comparison to AI-1, the sequences related to AI-2 (LuxS) demonstrated a much wider taxonomic coverage. Some significant correlations were found between dominant species and QS signals. In addition to the QS, we also performed parallel analysis of the quorum quenching (QQ) sequences. In comparison to QS, the relative abundance of QQ signals was lower; however, an obvious frequency correlation was observed. These results suggested that QS and QQ signals co-participate in regulating microbial communities during an algal bloom. These data helped to reveal the characteristic behavior of algal symbiotic bacteria, and facilitated a better understanding of microbial dynamics during an algal bloom event from a chemical ecological perspective.
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Affiliation(s)
- Xinqing Huang
- Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, The Graduate School at Shenzhen, Tsinghua University, Guangdong Province, Shenzhen, China
| | - Jianming Zhu
- Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, The Graduate School at Shenzhen, Tsinghua University, Guangdong Province, Shenzhen, China
| | - Zhonghua Cai
- Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, The Graduate School at Shenzhen, Tsinghua University, Guangdong Province, Shenzhen, China
| | - Yongmin Lao
- Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, The Graduate School at Shenzhen, Tsinghua University, Guangdong Province, Shenzhen, China
| | - Hui Jin
- Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, The Graduate School at Shenzhen, Tsinghua University, Guangdong Province, Shenzhen, China
| | - Ke Yu
- The Division of Environment and Energy, Graduate School at Shenzhen, Peking University, Guangdong Province, Shenzhen, China
| | - Boya Zhang
- The Division of Environment and Energy, Graduate School at Shenzhen, Peking University, Guangdong Province, Shenzhen, China
| | - Jin Zhou
- Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, The Graduate School at Shenzhen, Tsinghua University, Guangdong Province, Shenzhen, China.
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Wang Y, Liu Q, Wei Z, Liu N, Li Y, Li D, Jin Z, Xu X. Thiazole Amides, A Novel Class of Algaecides against Freshwater Harmful Algae. Sci Rep 2018; 8:8555. [PMID: 29867206 PMCID: PMC5986738 DOI: 10.1038/s41598-018-26911-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2017] [Accepted: 04/13/2018] [Indexed: 11/29/2022] Open
Abstract
Currently, harmful algal blooms are being one of ever-increasing global environmental problems. Much attention has been paid to the use of natural products as the selective algaecides due to their low toxicity, high selectivity and eco-friendly properties. In the present study, the thiazole alkaloid (1), originally isolated from Thermoactino-myces strain TM-64, was shown to exhibit potent algicidal activity against three typically harmful cyanobacterial algae, S. obliqnus, M. aeruginosa, and C. pyrenoidosa. Based on our previous work, a practical, scalable synthesis of alkaloid (1) was developed and reaction could be readily scaled up to more than 100 g. In addition, twenty-six analogues of alkaloid (1) by replacement of tryptamine moiety with different aromatic and aliphatic amines were also prepared. The bioassay results showed that most of these derivatives displayed potent algicidal activity against three harmful algae S. obliqnus, M. aeruginosa, and C. pyrenoidosa with IC50 values in the range of 1.5-5.0 μg/mL. Amongst them, compounds (10) and its hydrochloric salt (10S) were found to reveal powerful growth inhibitory activity against harmful cyanobacterial algae with IC50 values as low as 0.08 μg/mL, comparable to those of commercial algicide CuSO4 and herbicide Diuron.
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Affiliation(s)
- Ying Wang
- State Key Laboratory and Institute of Elementoorganic Chemistry, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Qisheng Liu
- State Key Laboratory and Institute of Elementoorganic Chemistry, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Zhigang Wei
- State Key Laboratory and Institute of Elementoorganic Chemistry, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Na Liu
- State Key Laboratory and Institute of Elementoorganic Chemistry, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Yajuan Li
- State Key Laboratory and Institute of Elementoorganic Chemistry, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Duo Li
- State Key Laboratory and Institute of Elementoorganic Chemistry, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Zhong Jin
- State Key Laboratory and Institute of Elementoorganic Chemistry, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China.
| | - Xiaohua Xu
- State Key Laboratory and Institute of Elementoorganic Chemistry, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China.
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin, 300071, P. R. China.
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Li DX, Zhang H, Chen XH, Xie ZX, Zhang Y, Zhang SF, Lin L, Chen F, Wang DZ. Metaproteomics reveals major microbial players and their metabolic activities during the blooming period of a marine dinoflagellate Prorocentrum donghaiense. Environ Microbiol 2017; 20:632-644. [PMID: 29124849 DOI: 10.1111/1462-2920.13986] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2017] [Revised: 09/12/2017] [Accepted: 10/27/2017] [Indexed: 01/04/2023]
Abstract
Interactions between bacteria and phytoplankton during bloom events are essential for both partners, which impacts their physiology, alters ambient chemistry and shapes ecosystem diversity. Here, we investigated the community structure and metabolic activities of free-living bacterioplankton in different blooming phases of a dinoflagellate Prorocentrum donghaiense using a metaproteomic approach. The Fibrobacteres-Chlorobi-Bacteroidetes group, Rhodobacteraceae, SAR11 and SAR86 clades contributed largely to the bacterial community in the middle-blooming phase while the Pseudoalteromonadaceae exclusively dominated in the late-blooming phase. Transporters and membrane proteins, especially TonB-dependent receptors were highly abundant in both blooming phases. Proteins involved in carbon metabolism, energy metabolism and stress response were frequently detected in the middle-blooming phase while proteins participating in proteolysis and central carbon metabolism were abundant in the late-blooming phase. Beta-glucosidase with putative algicidal capability was identified from the Pseudoalteromonadaceae only in the late-blooming phase, suggesting an active role of this group in lysing P. donghaiense cells. Our results indicated that diverse substrate utilization strategies and different capabilities for environmental adaptation among bacteria shaped their distinct niches in different bloom phases, and certain bacterial species from the Pseudoalteromonadaceae might be crucial for the termination of a dinoflagellate bloom.
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Affiliation(s)
- Dong-Xu Li
- State Key Laboratory of Marine Environmental Science/College of the Environment and Ecology, Xiamen University, Xiamen, China
| | - Hao Zhang
- State Key Laboratory of Marine Environmental Science/College of the Environment and Ecology, Xiamen University, Xiamen, China
| | - Xiao-Huang Chen
- State Key Laboratory of Marine Environmental Science/College of the Environment and Ecology, Xiamen University, Xiamen, China
| | - Zhang-Xian Xie
- State Key Laboratory of Marine Environmental Science/College of the Environment and Ecology, Xiamen University, Xiamen, China
| | - Yong Zhang
- State Key Laboratory of Marine Environmental Science/College of the Environment and Ecology, Xiamen University, Xiamen, China
| | - Shu-Feng Zhang
- State Key Laboratory of Marine Environmental Science/College of the Environment and Ecology, Xiamen University, Xiamen, China
| | - Lin Lin
- State Key Laboratory of Marine Environmental Science/College of the Environment and Ecology, Xiamen University, Xiamen, China
| | - Feng Chen
- Institute of Marine and Environmental Technology, University of Maryland Center for Environmental Science, Baltimore, MD, USA
| | - Da-Zhi Wang
- State Key Laboratory of Marine Environmental Science/College of the Environment and Ecology, Xiamen University, Xiamen, China
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Wang B, Tao Y, Liu Q, Liu N, Jin Z, Xu X. Algicidal Activity of Bacillamide Alkaloids and Their Analogues against Marine and Freshwater Harmful Algae. Mar Drugs 2017; 15:E247. [PMID: 28783131 PMCID: PMC5577602 DOI: 10.3390/md15080247] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2017] [Revised: 07/27/2017] [Accepted: 08/03/2017] [Indexed: 12/04/2022] Open
Abstract
Harmful algal blooms have become a great challenge to global aquatic ecosystems over the past decades. Given their low toxicity, high selectivity, and environment-friendly properties, the use of natural products and their analogues as algicides has proven to be particularly efficient. In the present study, algicidal activity of naturally occurring bacillamides A-C, alkaloid (1), and neobacillamide A, as well as their synthetic analogues were investigated intensively. Bioassay results showed that, relative to natural bacillamide alkaloids, aniline-derived analogue (10d) exhibited higher algicidal potential against three freshwater harmful algae Mycrocyctis aeruginosa, Scenedesmus obliquus, and Chlorella pyrenoidosa, suggesting that it could be used as a promising lead compound to develop novel algicide for controlling harmful algal blooms.
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Affiliation(s)
- Bo Wang
- State Key Laboratory of Elementoorganic Chemistry, Nankai University, Tianjin 300071, China.
| | - Yuanyuan Tao
- State Key Laboratory of Elementoorganic Chemistry, Nankai University, Tianjin 300071, China.
| | - Qisheng Liu
- State Key Laboratory of Elementoorganic Chemistry, Nankai University, Tianjin 300071, China.
| | - Na Liu
- State Key Laboratory of Elementoorganic Chemistry, Nankai University, Tianjin 300071, China.
| | - Zhong Jin
- State Key Laboratory of Elementoorganic Chemistry, Nankai University, Tianjin 300071, China.
| | - Xiaohua Xu
- State Key Laboratory of Elementoorganic Chemistry, Nankai University, Tianjin 300071, China.
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin 300071, China.
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Jin P, Wang H, Liu W, Zhang S, Lin C, Zheng F, Miao W. Bactericidal metabolites from Phellinus noxius HN-1 against Microcystis aeruginosa. Sci Rep 2017; 7:3132. [PMID: 28600514 DOI: 10.1038/s41598-017-03440-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2016] [Accepted: 05/16/2017] [Indexed: 11/08/2022] Open
Abstract
Harmful algal blooms cause serious problems worldwide due to large quantities of cyanotoxins produced by cyanobacteria in eutrophic water. In this study, a new compound named 2-(3, 4-dihydroxy-2-methoxyphenyl)-1, 3-benzodioxole-5-carbaldehyde (Compound 1), together with one known compound, 3, 4-dihydroxybenzalacetone (DBL), was purified from Phellinus noxius HN-1 (CCTCC M 2016242). Compound 1 and DBL displayed activity against the cyanobacteria Microcystis aeruginosa with a half maximal effective concentration of 21 and 5 μg/mL, respectively. Scanning electron and transmission electron microscopic observations showed that the compounds caused serious damage and significant lysis to M. aeruginosa cells. qRT-PCR assay indicated that compound 1 and DBL exposure up-regulated the expression of gene mcyB and down-regulated the expression of genes ftsZ, psbA1, and glmS in M. aeruginosa. This study provides the first evidence of bactericidal activity of a new compound and DBL. In summary, our results suggest that compound 1 and DBL might be developed as naturally-based biocontrol agents.
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Beleneva IA, Skriptsova AV, Svetashev VI. Characterization of biofilm-forming marine bacteria and their effect on attachment and germination of algal spores. Microbiology (Reading) 2017. [DOI: 10.1134/s0026261717030031] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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Pokrzywinski KL, Tilney CL, Warner ME, Coyne KJ. Cell cycle arrest and biochemical changes accompanying cell death in harmful dinoflagellates following exposure to bacterial algicide IRI-160AA. Sci Rep 2017; 7:45102. [PMID: 28332589 PMCID: PMC5362807 DOI: 10.1038/srep45102] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2016] [Accepted: 02/17/2017] [Indexed: 12/02/2022] Open
Abstract
Bacteria may play a role in regulating harmful algal blooms, but little is known about the biochemical and physiological changes associated with cell death induced by algicidal bacteria. Previous work characterized an algicidal exudate (IRI-160AA) produced by Shewanella sp. IRI-160 that is effective against dinoflagellates, while having little to no effect on other phytoplankton species in laboratory culture experiments. The objective of this study was to evaluate biochemical changes associated with cell death and impacts on the cell cycle in three dinoflagellate species (Prorocentrum minimum, Karlodinium veneficum and Gyrodinium instriatum) after exposure to IRI-160AA. In this study, IRI-160AA induced cell cycle arrest in all dinoflagellates examined. Several indicators for programmed cell death (PCD) that are often observed in phytoplankton in response to a variety of stressors were also evaluated. Cell death was accompanied by significant increases in DNA degradation, intra- and extracellular ROS concentrations and DEVDase (caspase-3 like) protease activity, which have been associated with PCD in other phytoplankton species. Overall, results of this investigation provide strong evidence that treatment with the bacterial algicide, IRI-160AA results in cell cycle arrest and induces biochemical changes consistent with stress-related cell death responses observed in other phytoplankton.
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Affiliation(s)
- Kaytee L Pokrzywinski
- College of Earth, Ocean, and Environment, University of Delaware, 700 Pilottown Road, Lewes, DE 19958, USA
| | - Charles L Tilney
- College of Earth, Ocean, and Environment, University of Delaware, 700 Pilottown Road, Lewes, DE 19958, USA
| | - Mark E Warner
- College of Earth, Ocean, and Environment, University of Delaware, 700 Pilottown Road, Lewes, DE 19958, USA
| | - Kathryn J Coyne
- College of Earth, Ocean, and Environment, University of Delaware, 700 Pilottown Road, Lewes, DE 19958, USA
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Pokrzywinski KL, Tilney CL, Modla S, Caplan JL, Ross J, Warner ME, Coyne KJ. Effects of the bacterial algicide IRI-160AA on cellular morphology of harmful dinoflagellates. Harmful Algae 2017; 62:127-135. [PMID: 28118887 DOI: 10.1016/j.hal.2016.12.004] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2016] [Revised: 12/06/2016] [Accepted: 12/16/2016] [Indexed: 06/06/2023]
Abstract
The algicide, IRI-160AA, induces mortality in dinoflagellates but not other species of algae, suggesting that a shared characteristic or feature renders this class of phytoplankton vulnerable to the algicide. In contrast to other eukaryotic species, the genome of dinoflagellates is stabilized by high concentrations of divalent cations and transition metals and contains large amounts of DNA with unusual base modifications. These distinctions set dinoflagellates apart from other phytoplankton and suggest that the nucleus may be a dinoflagellate-specific target for IRI-160AA. In this study, morphological and ultrastructural changes in three dinoflagellate species, Prorocentrum minimum, Karlodinium veneficum and Gyrodinium instriatum, were evaluated after short-term exposure to IRI-160AA using super resolution structured illumination microscopy (SR-SIM) and transmission electron microscopy (TEM). Exposure to the algicide resulted in cytoplasmic membrane blebbing, differing chloroplast morphologies, nuclear expansion, and chromosome expulsion and/or destabilization. TEM analysis showed that chromosomes of algicide-treated K. veneficum appeared electron dense with fibrous protrusions. In algicide-treated P. minimum and G. instriatum, chromosome decompaction occurred, while for P. minimum, nuclear expulsion was also observed for several cells. Results of this investigation demonstrate that exposure to the algicide destabilizes dinoflagellate chromosomes, although it was not clear if the nucleus was the primary target of the algicide or if the observed effects on chromosomal structure were due to downstream impacts. In all cases, changes in cellular morphology and ultrastructure were observed within two hours, suggesting that the algicide may be an effective and rapid approach to mitigate dinoflagellate blooms.
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Affiliation(s)
- Kaytee L Pokrzywinski
- College of Earth, Ocean, and Environment, University of Delaware, 700 Pilottown Road, Lewes, DE 19958, USA
| | - Charles L Tilney
- College of Earth, Ocean, and Environment, University of Delaware, 700 Pilottown Road, Lewes, DE 19958, USA
| | - Shannon Modla
- Biomaging Center, Delaware Biotechnology Institute, University of Delaware, 15 Innovation Way, Newark, DE 19711, USA
| | - Jeffery L Caplan
- Biomaging Center, Delaware Biotechnology Institute, University of Delaware, 15 Innovation Way, Newark, DE 19711, USA
| | - Jean Ross
- Biomaging Center, Delaware Biotechnology Institute, University of Delaware, 15 Innovation Way, Newark, DE 19711, USA
| | - Mark E Warner
- College of Earth, Ocean, and Environment, University of Delaware, 700 Pilottown Road, Lewes, DE 19958, USA
| | - Kathryn J Coyne
- College of Earth, Ocean, and Environment, University of Delaware, 700 Pilottown Road, Lewes, DE 19958, USA.
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Inaba N, Trainer VL, Onishi Y, Ishii KI, Wyllie-Echeverria S, Imai I. Algicidal and growth-inhibiting bacteria associated with seagrass and macroalgae beds in Puget Sound, WA, USA. Harmful Algae 2017; 62:136-147. [PMID: 28118888 DOI: 10.1016/j.hal.2016.04.004] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2015] [Revised: 04/07/2016] [Accepted: 04/07/2016] [Indexed: 06/06/2023]
Abstract
The algicidal and growth-inhibiting bacteria associated with seagrasses and macroalgae were characterized during the summer of 2012 and 2013 throughout Puget Sound, WA, USA. In 2012, Heterosigma akashiwo-killing bacteria were observed in concentrations of 2.8×106CFUg-1 wet in the outer organic layer (biofilm) on the common eelgrass (Zostera marina) in north Padilla Bay. Bacteria that inhibited the growth of Alexandrium tamarense were detected within the biofilm formed on the eelgrass canopy at Dumas Bay and North Bay at densities of ∼108CFUg-1 wet weight. Additionally, up to 4100CFUmL-1 of algicidal and growth-inhibiting bacteria affecting both A. tamarense and H. akashiwo were detected in seawater adjacent to seven different eelgrass beds. In 2013, H. akashiwo-killing bacteria were found on Z. marina and Ulva lactuca with the highest densities of ∼108CFUg-1 wet weight at Shallow Bay, Sucia Island. Bacteria that inhibited the growth of H. akashiwo and A. tamarense were also detected on Z. marina and Z. japonica at central Padilla Bay. Heterosigma akashiwo cysts were detected at a concentration of 3400cystsg-1 wet weight in the sediment from Westcott Bay (northern San Juan Island), a location where eelgrass disappeared in 2002. These findings provide new insights on the ecology of algicidal and growth-inhibiting bacteria, and suggest that seagrass and macroalgae provide an environment that may influence the abundance of harmful algae in this region. This work highlights the importance of protection and restoration of native seagrasses and macroalgae in nearshore environments, in particular those regions where shellfish restoration initiatives are in place to satisfy a growing demand for seafood.
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Affiliation(s)
- Nobuharu Inaba
- Plankton Laboratory, Graduate School of Fisheries Sciences, Hokkaido University, 3-1-1 Minato-cho, Hakodate, Hokkaido, 041-8611, Japan.
| | - Vera L Trainer
- Marine Biotoxins Program, Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, 2725 Montlake Blvd. E., Seattle, WA, 98112, United States.
| | - Yuka Onishi
- Plankton Laboratory, Graduate School of Fisheries Sciences, Hokkaido University, 3-1-1 Minato-cho, Hakodate, Hokkaido, 041-8611, Japan
| | - Ken-Ichiro Ishii
- Division of Environmental Biotechnology, Graduate School of Global Environmental Study, Kyoto University, Yoshida-Honmachi, Sakyo-ku, Kyoto, 606-8501, Japan
| | - Sandy Wyllie-Echeverria
- Friday Harbor Laboratories, College of the Environment, University of Washington, 620 University Road, Friday Harbor, WA, 98250, United States
| | - Ichiro Imai
- Plankton Laboratory, Graduate School of Fisheries Sciences, Hokkaido University, 3-1-1 Minato-cho, Hakodate, Hokkaido, 041-8611, Japan.
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Wurochekke AA, Mohamed RMS, Al-Gheethi AA, Atiku H, Amir HM, Matias-Peralta HM. Household greywater treatment methods using natural materials and their hybrid system. J Water Health 2016; 14:914-928. [PMID: 27959870 DOI: 10.2166/wh.2016.054] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Discharge of household greywater into water bodies can lead to an increase in contamination levels in terms of the reduction in dissolved oxygen resources and rapid bacterial growth. Therefore, the quality of greywater has to be improved before the disposal process. The present review aimed to present a hybrid treatment system for the greywater generated from households. The hybrid system comprised a primary stage (a natural filtration unit) with a bioreactor system as the secondary treatment combined with microalgae for greywater treatment, as well as the natural flocculation process. The review discussed the efficiency of each stage in the removal of elements and nutrients. The hybrid system reviewed here represented an effective solution for the remediation of household greywater.
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Affiliation(s)
- A A Wurochekke
- Faculty of Civil and Environmental Engineering, Universiti Tun Hussein Onn Malaysia (UTHM), Johor 86400, Malaysia E-mail:
| | - R M S Mohamed
- Faculty of Civil and Environmental Engineering, Universiti Tun Hussein Onn Malaysia (UTHM), Johor 86400, Malaysia E-mail: ; Center of Micro-pollutant Research Batu Pahat, Universiti Tun Hussein Onn Malaysia (UTHM), Johor 86400, Malaysia
| | - A A Al-Gheethi
- Faculty of Civil and Environmental Engineering, Universiti Tun Hussein Onn Malaysia (UTHM), Johor 86400, Malaysia E-mail:
| | - Hauwa Atiku
- Faculty of Civil and Environmental Engineering, Universiti Tun Hussein Onn Malaysia (UTHM), Johor 86400, Malaysia E-mail:
| | - H M Amir
- Faculty of Civil and Environmental Engineering, Universiti Tun Hussein Onn Malaysia (UTHM), Johor 86400, Malaysia E-mail:
| | - H M Matias-Peralta
- Faculty of Science, Technology and Human Development, UTHM, Parit Raja, Johor 86400, Malaysia
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Higashi A, Fujitani Y, Nakayama N, Tani A, Ueki S. Selective growth promotion of bloom-forming raphidophyte Heterosigma akashiwo by a marine bacterial strain. Harmful Algae 2016; 60:150-156. [PMID: 28073558 DOI: 10.1016/j.hal.2016.11.009] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2016] [Revised: 09/28/2016] [Accepted: 11/14/2016] [Indexed: 06/06/2023]
Abstract
Algal bloom is typically caused by aberrant propagation of a single species, resulting in its predomination in the local population. While environmental factors including temperature and eutrophication are linked to bloom, the precise mechanism of its formation process is still obscure. Here, we isolated a bacterial strain that promotes growth of Heterosigma akashiwo, a Raphidophyceae that causes harmful algal blooms. Based on 16S rRNA gene sequence, the strain was identified as Altererythrobacter ishigakiensis, a member of the class Alphaproteobacteria. When added to culture, this strain facilitated growth of H. akashiwo and increased its cell culture yield significantly. Importantly, this strain did not affect the growth of other raphidophytes, Chattonella ovate and C. antiqua, indicating that it promotes growth of H. akashiwo in a species-specific manner. We also found that, in co-culture, H. akashiwo suppressed the growth of C. ovate. When A. ishigakiensis was added to the mixed culture, H. akashiwo growth was facilitated while C. ovate propagation was markedly suppressed, indicating that the presence of the bacterium enhances the dominance of H. akashiwo over C. ovate. This is the first example of selective growth promotion of H. akashiwo by a marine bacterium, and may exemplify importance of symbiotic bacterium on algal bloom forming process in general.
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Affiliation(s)
- Aiko Higashi
- Institute of Plant Science and Resources, Okayama University, 2-20-1 Chuo, Kurashiki, Okayama 710-0046, Japan
| | - Yoshiko Fujitani
- Institute of Plant Science and Resources, Okayama University, 2-20-1 Chuo, Kurashiki, Okayama 710-0046, Japan
| | - Natsuko Nakayama
- National Research and Development Agency, Japan Fisheries Research and Education Agency, 2-17-5 Maruishi, Hatsukaichi, Hiroshima 739-0452, Japan
| | - Akio Tani
- Institute of Plant Science and Resources, Okayama University, 2-20-1 Chuo, Kurashiki, Okayama 710-0046, Japan
| | - Shoko Ueki
- Institute of Plant Science and Resources, Okayama University, 2-20-1 Chuo, Kurashiki, Okayama 710-0046, Japan.
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Atiku H, Mohamed RMSR, Al-Gheethi AA, Wurochekke AA, Kassim AHM. Harvesting of microalgae biomass from the phycoremediation process of greywater. Environ Sci Pollut Res Int 2016; 23:24624-24641. [PMID: 27544526 DOI: 10.1007/s11356-016-7456-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2016] [Accepted: 08/10/2016] [Indexed: 06/06/2023]
Abstract
The wide application of microalgae in the field of wastewater treatment and bioenergy source has improved research studies in the past years. Microalgae represent a good source of biomass and bio-products which are used in different medical and industrial activities, among them the production of high-valued products and biofuels. The present review focused on greywater treatment through the application of phycoremediation technique with microalgae and presented recent advances in technologies used for harvesting the microalgae biomass. The advantages and disadvantages of each method are discussed. The microbiological aspects of production, harvesting and utilization of microalgae biomass are viewed.
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Affiliation(s)
- Hauwa Atiku
- Micro-pollution Research Centre (MPRC), Department of Water and Environmental Engineering, Faculty of Civil & Environmental Engineering, Universiti Tun Hussein Onn Malaysia, 86400 Parit Raja, Batu Pahat, Johor, Malaysia
| | - R M S R Mohamed
- Micro-pollution Research Centre (MPRC), Department of Water and Environmental Engineering, Faculty of Civil & Environmental Engineering, Universiti Tun Hussein Onn Malaysia, 86400 Parit Raja, Batu Pahat, Johor, Malaysia.
| | - A A Al-Gheethi
- Micro-pollution Research Centre (MPRC), Department of Water and Environmental Engineering, Faculty of Civil & Environmental Engineering, Universiti Tun Hussein Onn Malaysia, 86400 Parit Raja, Batu Pahat, Johor, Malaysia
| | - A A Wurochekke
- Micro-pollution Research Centre (MPRC), Department of Water and Environmental Engineering, Faculty of Civil & Environmental Engineering, Universiti Tun Hussein Onn Malaysia, 86400 Parit Raja, Batu Pahat, Johor, Malaysia
| | - Amir Hashim M Kassim
- Micro-pollution Research Centre (MPRC), Department of Water and Environmental Engineering, Faculty of Civil & Environmental Engineering, Universiti Tun Hussein Onn Malaysia, 86400 Parit Raja, Batu Pahat, Johor, Malaysia
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Geng H, Tran-Gyamfi MB, Lane TW, Sale KL, Yu ET. Changes in the Structure of the Microbial Community Associated with Nannochloropsis salina following Treatments with Antibiotics and Bioactive Compounds. Front Microbiol 2016; 7:1155. [PMID: 27507966 PMCID: PMC4960269 DOI: 10.3389/fmicb.2016.01155] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2015] [Accepted: 07/11/2016] [Indexed: 02/01/2023] Open
Abstract
Open microalgae cultures host a myriad of bacteria, creating a complex system of interacting species that influence algal growth and health. Many algal microbiota studies have been conducted to determine the relative importance of bacterial taxa to algal culture health and physiological states, but these studies have not characterized the interspecies relationships in the microbial communities. We subjected Nanochroloropsis salina cultures to multiple chemical treatments (antibiotics and quorum sensing compounds) and obtained dense time-series data on changes to the microbial community using 16S gene amplicon metagenomic sequencing (21,029,577 reads for 23 samples) to measure microbial taxa-taxa abundance correlations. Short-term treatment with antibiotics resulted in substantially larger shifts in the microbiota structure compared to changes observed following treatment with signaling compounds and glucose. We also calculated operational taxonomic unit (OTU) associations and generated OTU correlation networks to provide an overview of possible bacterial OTU interactions. This analysis identified five major cohesive modules of microbiota with similar co-abundance profiles across different chemical treatments. The Eigengenes of OTU modules were examined for correlation with different external treatment factors. This correlation-based analysis revealed that culture age (time) and treatment types have primary effects on forming network modules and shaping the community structure. Additional network analysis detected Alteromonadeles and Alphaproteobacteria as having the highest centrality, suggesting these species are “keystone” OTUs in the microbial community. Furthermore, we illustrated that the chemical tropodithietic acid, which is secreted by several species in the Alphaproteobacteria taxon, is able to drastically change the structure of the microbiota within 3 h. Taken together, these results provide valuable insights into the structure of the microbiota associated with N. salina cultures and how these structures change in response to chemical perturbations.
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Affiliation(s)
- Haifeng Geng
- Department of Systems Biology, Sandia National Laboratories Livermore, CA, USA
| | - Mary B Tran-Gyamfi
- Department of Biomass Science and Conversion Technology, Sandia National Laboratories Livermore, CA, USA
| | - Todd W Lane
- Department of Systems Biology, Sandia National Laboratories Livermore, CA, USA
| | - Kenneth L Sale
- Department of Biomass Science and Conversion Technology, Sandia National Laboratories Livermore, CA, USA
| | - Eizadora T Yu
- Department of Systems Biology, Sandia National LaboratoriesLivermore, CA, USA; Institute of Chemistry, University of the Philippines DilimanQuezon City, Philippines
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Ismail A, Ktari L, Ahmed M, Bolhuis H, Boudabbous A, Stal LJ, Cretoiu MS, El Bour M. Antimicrobial Activities of Bacteria Associated with the Brown Alga Padina pavonica. Front Microbiol 2016; 7:1072. [PMID: 27462308 PMCID: PMC4940378 DOI: 10.3389/fmicb.2016.01072] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2015] [Accepted: 06/27/2016] [Indexed: 11/13/2022] Open
Abstract
Macroalgae belonging to the genus Padina are known to produce antibacterial compounds that may inhibit growth of human- and animal pathogens. Hitherto, it was unclear whether this antibacterial activity is produced by the macroalga itself or by secondary metabolite producing epiphytic bacteria. Here we report antibacterial activities of epiphytic bacteria isolated from Padina pavonica (Peacocks tail) located on northern coast of Tunisia. Eighteen isolates were obtained in pure culture and tested for antimicrobial activities. Based on the 16S rRNA gene sequences the isolates were closely related to Proteobacteria (12 isolates; 2 Alpha- and 10 Gammaproteobacteria), Firmicutes (4 isolates) and Actinobacteria (2 isolates). The antimicrobial activity was assessed as inhibition of growth of 12 species of pathogenic bacteria (Aeromonas salmonicida, A. hydrophila, Enterobacter xiangfangensis, Enterococcus faecium, Escherichia coli, Micrococcus sp., Salmonella typhimurium, Staphylococcus aureus, Streptococcus sp., Vibrio alginoliticus, V. proteolyticus, V. vulnificus) and one pathogenic yeast (Candida albicans). Among the Firmicutes, isolate P8, which is closely related to Bacillus pumilus, displayed the largest spectrum of growth inhibition of the pathogenic bacteria tested. The results emphasize the potential use of P. pavonica associated antagonistic bacteria as producers of novel antibacterial compounds.
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Affiliation(s)
- Amel Ismail
- National Institute of Marine Sciences and Technologies Salammbô, Tunisia
| | - Leila Ktari
- National Institute of Marine Sciences and Technologies Salammbô, Tunisia
| | - Mehboob Ahmed
- Department of Marine Microbiology and Biogeochemistry, Royal Netherlands Institute for Sea Research and Utrecht UniversityYerseke, Netherlands; Department of Microbiology and Molecular Genetics, University of the PunjabLahore, Pakistan
| | - Henk Bolhuis
- Department of Marine Microbiology and Biogeochemistry, Royal Netherlands Institute for Sea Research and Utrecht University Yerseke, Netherlands
| | - Abdellatif Boudabbous
- Faculty of Mathematical, Physical and Natural Sciences of Tunis, Tunis El Manar University Tunis, Tunisia
| | - Lucas J Stal
- Department of Marine Microbiology and Biogeochemistry, Royal Netherlands Institute for Sea Research and Utrecht UniversityYerseke, Netherlands; Department of Aquatic Microbiology, Institute of Biodiversity and Ecosystem Dynamics, University of AmsterdamAmsterdam, Netherlands
| | - Mariana Silvia Cretoiu
- Department of Marine Microbiology and Biogeochemistry, Royal Netherlands Institute for Sea Research and Utrecht University Yerseke, Netherlands
| | - Monia El Bour
- National Institute of Marine Sciences and Technologies Salammbô, Tunisia
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Geng H, Sale KL, Tran-Gyamfi MB, Lane TW, Yu ET. Longitudinal Analysis of Microbiota in Microalga Nannochloropsis salina Cultures. Microb Ecol 2016; 72:14-24. [PMID: 26956183 DOI: 10.1007/s00248-016-0746-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2015] [Accepted: 02/22/2016] [Indexed: 06/05/2023]
Abstract
Large-scale open microalgae cultivation has tremendous potential to make a significant contribution to replacing petroleum-based fuels with biofuels. Open algal cultures are unavoidably inhabited with a diversity of microbes that live on, influence, and shape the fate of these ecosystems. However, there is little understanding of the resilience and stability of the microbial communities in engineered semicontinuous algal systems. To evaluate the dynamics and resilience of the microbial communities in microalgae biofuel cultures, we conducted a longitudinal study on open systems to compare the temporal profiles of the microbiota from two multigenerational algal cohorts, which include one seeded with the microbiota from an in-house culture and the other exogenously seeded with a natural-occurring consortia of bacterial species harvested from the Pacific Ocean. From these month-long, semicontinuous open microalga Nannochloropsis salina cultures, we sequenced a time-series of 46 samples, yielding 8804 operational taxonomic units derived from 9,160,076 high-quality partial 16S rRNA sequences. We provide quantitative evidence that clearly illustrates the development of microbial community is associated with microbiota ancestry. In addition, N. salina growth phases were linked with distinct changes in microbial phylotypes. Alteromonadeles dominated the community in the N. salina exponential phase whereas Alphaproteobacteria and Flavobacteriia were more prevalent in the stationary phase. We also demonstrate that the N. salina-associated microbial community in open cultures is diverse, resilient, and dynamic in response to environmental perturbations. This knowledge has general implications for developing and testing design principles of cultivated algal systems.
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Affiliation(s)
- Haifeng Geng
- Department of Systems Biology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94550, USA
| | - Kenneth L Sale
- Department of Biomass Science and Conversion Technology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94550, USA
| | - Mary Bao Tran-Gyamfi
- Department of Biomass Science and Conversion Technology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94550, USA
| | - Todd W Lane
- Department of Systems Biology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94550, USA.
| | - Eizadora T Yu
- Department of Systems Biology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94550, USA
- Institute of Chemistry, National Science Complex, University of the Philippines, Diliman Quezon City, 1101, Philippines
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Park BS, Joo JH, Baek KD, Han MS. A mutualistic interaction between the bacterium Pseudomonas asplenii and the harmful algal species Chattonella marina (Raphidophyceae). Harmful Algae 2016; 56:29-36. [PMID: 28073494 DOI: 10.1016/j.hal.2016.04.006] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2016] [Revised: 04/12/2016] [Accepted: 04/13/2016] [Indexed: 05/28/2023]
Abstract
Several studies on various Chattonella species have reported that bacteria may play an important role in Chattonella bloom initiation, however, no studies have described how these bacteria promote the growth of C. marina. The interaction between C. marina and bacteria was investigated for identification and characterization of potential growth-promoting bacteria. In preliminary tests, the growth promoting effect of Pseudomonas species (25 strains) was investigated and P. asplenii (≥2.27) was determined as a growth-promoting bacteria for both C. marina strains (CCMP 2049 and 2050). This bacterium exerted optimal growth-promoting effects on C. marina, causing an increase in the initial density of P. asplenii to approximately 1×107cellsmL-1, which was used as the initial density in this study. To determine whether the growth-promoting activity was direct or indirect, P. asplenii was incubated in the algal media and then a filtrate of this culture was added to both C. marina strains. The P. asplenii filtrate stimulated the growth of C. marina and maintained the growth-promoting effects after high temperature (121°C for 20min) and pressure (15psi) treatment. Thus, P. asplenii is able to promote C. marina growth through the release of a heat-resistant substance, such as inorganic nutrients. A nutrient analysis indicated that this bacterium elevated the phosphate concentration. Interestingly, P. asplenii was unable to survive in phosphate-limited media but could grow in phosphate-limited media incubating C. marina. Moreover, this bacterium could secrete significantly more phosphate in the presence of C. marina (p<0.0001). These results suggested that P. asplenii and C. marina may have a mutualistic interaction.
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Affiliation(s)
- Bum Soo Park
- Department of Life Science, College of Natural Sciences, Hanyang University, Seoul 04763, South Korea; Research Institute for Natural Sciences, Hanyang University, Seoul 04763, South Korea
| | - Jae-Hyoung Joo
- Department of Life Science, College of Natural Sciences, Hanyang University, Seoul 04763, South Korea
| | - Kyung-Duck Baek
- Department of Life Science, College of Natural Sciences, Hanyang University, Seoul 04763, South Korea
| | - Myung-Soo Han
- Department of Life Science, College of Natural Sciences, Hanyang University, Seoul 04763, South Korea; Research Institute for Natural Sciences, Hanyang University, Seoul 04763, South Korea.
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Bloh AH, Usup G, Ahmad A. Loktanella spp. Gb03 as an algicidal bacterium, isolated from the culture of Dinoflagellate Gambierdiscus belizeanus. Vet World 2016; 9:142-6. [PMID: 27051199 PMCID: PMC4819363 DOI: 10.14202/vetworld.2016.142-146] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2015] [Revised: 12/23/2015] [Accepted: 12/29/2015] [Indexed: 11/25/2022] Open
Abstract
Aim: Bacteria associated with harmful algal blooms can play a crucial role in regulating algal blooms in the environment. This study aimed at isolating and identifying algicidal bacteria in Dinoflagellate culture and to determine the optimum growth requirement of the algicidal bacteria, Loktanella sp. Gb-03. Materials and Methods: The Dinoflagellate culture used in this study was supplied by Professor Gires Usup's Laboratory, School of Environmental and Natural Resources Sciences, Faculty of Science and Technology, University Kebangsaan Malaysia, Malaysia. The culture was used for the isolation of Loktanella sp., using biochemical tests, API 20 ONE kits. The fatty acid content of the isolates and the algicidal activity were further evaluated, and the phenotype was determined through the phylogenetic tree. Results: Gram-negative, non-motile, non-spore-forming, short rod-shaped, aerobic bacteria (Gb01, Gb02, Gb03, Gb04, Gb05, and Gb06) were isolated from the Dinoflagellate culture. The colonies were pink in color, convex with a smooth surface and entire edge. The optimum growth temperature for the Loktanella sp. Gb03 isolate was determined to be 30°C, in 1% of NaCl and pH7. Phylogenetic analysis based on 16S rRNA gene sequences showed that the bacterium belonged to the genus Loktanella of the class Alphaproteobacteria and formed a tight cluster with the type strain of Loktanella pyoseonensis (97.0% sequence similarity). Conclusion: On the basis of phenotypic, phylogenetic data and genetic distinctiveness, strain Gb-03, were placed in the genus Loktanella as the type strain of species. Moreover, it has algicidal activity against seven toxic Dinoflagellate. The algicidal property of the isolated Loktanella is vital, especially where biological control is needed to mitigate algal bloom or targeted Dinoflagellates.
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Affiliation(s)
- Anmar Hameed Bloh
- School of Bioscience and Biotechnology, Faculty of Science and Technology, University Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
| | - Gires Usup
- School of Environmental and Natural Resources Sciences, Faculty of Science and Technology, University Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
| | - Asmat Ahmad
- School of Bioscience and Biotechnology, Faculty of Science and Technology, University Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
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Harvey EL, Deering RW, Rowley DC, El Gamal A, Schorn M, Moore BS, Johnson MD, Mincer TJ, Whalen KE. A Bacterial Quorum-Sensing Precursor Induces Mortality in the Marine Coccolithophore, Emiliania huxleyi. Front Microbiol 2016; 7:59. [PMID: 26870019 PMCID: PMC4737879 DOI: 10.3389/fmicb.2016.00059] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2015] [Accepted: 01/13/2016] [Indexed: 11/29/2022] Open
Abstract
Interactions between phytoplankton and bacteria play a central role in mediating biogeochemical cycling and food web structure in the ocean. However, deciphering the chemical drivers of these interspecies interactions remains challenging. Here, we report the isolation of 2-heptyl-4-quinolone (HHQ), released by Pseudoalteromonas piscicida, a marine gamma-proteobacteria previously reported to induce phytoplankton mortality through a hitherto unknown algicidal mechanism. HHQ functions as both an antibiotic and a bacterial signaling molecule in cell–cell communication in clinical infection models. Co-culture of the bloom-forming coccolithophore, Emiliania huxleyi with both live P. piscicida and cell-free filtrates caused a significant decrease in algal growth. Investigations of the P. piscicida exometabolome revealed HHQ, at nanomolar concentrations, induced mortality in three strains of E. huxleyi. Mortality of E. huxleyi in response to HHQ occurred slowly, implying static growth rather than a singular loss event (e.g., rapid cell lysis). In contrast, the marine chlorophyte, Dunaliella tertiolecta and diatom, Phaeodactylum tricornutum were unaffected by HHQ exposures. These results suggest that HHQ mediates the type of inter-domain interactions that cause shifts in phytoplankton population dynamics. These chemically mediated interactions, and other like it, ultimately influence large-scale oceanographic processes.
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Affiliation(s)
- Elizabeth L Harvey
- Department of Marine Sciences, Skidaway Institute of Oceanography, University of Georgia, Savannah GA, USA
| | - Robert W Deering
- Department of Biomedical and Pharmaceutical Sciences, University of Rhode Island, Kingston RI, USA
| | - David C Rowley
- Department of Biomedical and Pharmaceutical Sciences, University of Rhode Island, Kingston RI, USA
| | - Abrahim El Gamal
- Scripps Institution of Oceanography, University of California at San Diego, La Jolla CA, USA
| | - Michelle Schorn
- Scripps Institution of Oceanography, University of California at San Diego, La Jolla CA, USA
| | - Bradley S Moore
- Scripps Institution of Oceanography, University of California at San Diego, La Jolla CA, USA
| | - Matthew D Johnson
- Biology Department, Woods Hole Oceanographic Institution, Woods Hole MA, USA
| | - Tracy J Mincer
- Marine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole MA, USA
| | - Kristen E Whalen
- Marine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole MA, USA
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Grueneberg J, Engelen AH, Costa R, Wichard T. Macroalgal Morphogenesis Induced by Waterborne Compounds and Bacteria in Coastal Seawater. PLoS One 2016; 11:e0146307. [PMID: 26745366 DOI: 10.1371/journal.pone.0146307] [Citation(s) in RCA: 53] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2015] [Accepted: 12/14/2015] [Indexed: 01/25/2023] Open
Abstract
Axenic gametes of the marine green macroalga Ulva mutabilis Føyn (Ria Formosa, locus typicus) exhibit abnormal development into slow-growing callus-like colonies with aberrant cell walls. Under laboratory conditions, it was previously demonstrated that all defects in growth and thallus development can be completely abolished when axenic gametes are inoculated with a combination of two specific bacterial strains originally identified as Roseobacter sp. strain MS2 and Cytophaga sp. strain MS6. These bacteria release diffusible morphogenetic compounds (= morphogens), which act similar to cytokinin and auxin. To investigate the ecological relevance of the waterborne bacterial morphogens, seawater samples were collected in the Ria Formosa lagoon (Algarve, Southern Portugal) at 20 sampling sites and tidal pools to assess their morphogenetic effects on the axenic gametes of U. mutabilis. Specifically the survey revealed that sterile-filtered seawater samples can completely recover growth and morphogenesis of U. mutabilis under axenic conditions. Morphogenetic activities of free-living and epiphytic bacteria isolated from the locally very abundant Ulva species (i.e., U. rigida) were screened using a multiwell-based testing system. The most represented genera isolated from U. rigida were Alteromonas, Pseudoalteromonas and Sulfitobacter followed by Psychrobacter and Polaribacter. Several naturally occurring bacterial species could emulate MS2 activity (= induction of cell divisions) regardless of taxonomic affiliation, whereas the MS6 activity (= induction of cell differentiation and cell wall formation) was species-specific and is probably a feature of difficult-to-culture bacteria. Interestingly, isolated bacteroidetes such as Algoriphagus sp. and Polaribacter sp. could individually trigger complete Ulva morphogenesis and thus provide a novel mode of action for bacterial-induced algal development. This study also highlights that the accumulation of algal growth factors in a shallow water body separated from the open ocean by barrier islands might have strong implications to, for example, the wide usage of natural coastal seawater in algal (land based) aquacultures of Ulva.
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Ramanan R, Kim BH, Cho DH, Oh HM, Kim HS. Algae-bacteria interactions: Evolution, ecology and emerging applications. Biotechnol Adv 2016; 34:14-29. [PMID: 26657897 DOI: 10.1016/j.biotechadv.2015.12.003] [Citation(s) in RCA: 511] [Impact Index Per Article: 63.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2015] [Revised: 12/01/2015] [Accepted: 12/02/2015] [Indexed: 11/28/2022]
Abstract
Algae and bacteria have coexisted ever since the early stages of evolution. This coevolution has revolutionized life on earth in many aspects. Algae and bacteria together influence ecosystems as varied as deep seas to lichens and represent all conceivable modes of interactions - from mutualism to parasitism. Several studies have shown that algae and bacteria synergistically affect each other's physiology and metabolism, a classic case being algae-roseobacter interaction. These interactions are ubiquitous and define the primary productivity in most ecosystems. In recent years, algae have received much attention for industrial exploitation but their interaction with bacteria is often considered a contamination during commercialization. A few recent studies have shown that bacteria not only enhance algal growth but also help in flocculation, both essential processes in algal biotechnology. Hence, there is a need to understand these interactions from an evolutionary and ecological standpoint, and integrate this understanding for industrial use. Here we reflect on the diversity of such relationships and their associated mechanisms, as well as the habitats that they mutually influence. This review also outlines the role of these interactions in key evolutionary events such as endosymbiosis, besides their ecological role in biogeochemical cycles. Finally, we focus on extending such studies on algal-bacterial interactions to various environmental and bio-technological applications.
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Affiliation(s)
- Rishiram Ramanan
- Sustainable Bioresource Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Yuseong-gu, Daejeon 305-806, Republic of Korea
| | - Byung-Hyuk Kim
- Sustainable Bioresource Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Yuseong-gu, Daejeon 305-806, Republic of Korea
| | - Dae-Hyun Cho
- Sustainable Bioresource Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Yuseong-gu, Daejeon 305-806, Republic of Korea
| | - Hee-Mock Oh
- Bioenergy and Biochemical Research Center, KRIBB, Yuseong-gu, Daejeon 305-806, Republic of Korea; Green Chemistry and Environmental Biotechnology, University of Science & Technology, Yuseong-gu, Daejeon 305-806, Republic of Korea
| | - Hee-Sik Kim
- Sustainable Bioresource Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Yuseong-gu, Daejeon 305-806, Republic of Korea; Green Chemistry and Environmental Biotechnology, University of Science & Technology, Yuseong-gu, Daejeon 305-806, Republic of Korea.
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Wang H, Butt L, Rooks P, Khan F, Allen MJ, Ali ST. Characterisation of algicidal bacterial exometabolites against the lipid-accumulating diatom Skeletonema sp. ALGAL RES 2016. [DOI: 10.1016/j.algal.2015.11.012] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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