Environmental drivers of increased ecosystem respiration in a warming tundra

Arctic and alpine tundra ecosystems are large reservoirs of organic carbon1,2. Climate warming may stimulate ecosystem respiration and release carbon into the atmosphere3,4. The magnitude and persistency of this stimulation and the environmental mechanisms that drive its variation remain uncertain5-7. This hampers the accuracy of global land carbon-climate feedback projections7,8. Here we synthesize 136 datasets from 56 open-top chamber in situ warming experiments located at 28 arctic and alpine tundra sites which have been running for less than 1 year up to 25 years. We show that a mean rise of 1.4 °C [confidence interval (CI) 0.9-2.0 °C] in air and 0.4 °C [CI 0.2-0.7 °C] in soil temperature results in an increase in growing season ecosystem respiration by 30% [CI 22-38%] (n = 136). Our findings indicate that the stimulation of ecosystem respiration was due to increases in both plant-related and microbial respiration (n = 9) and continued for at least 25 years (n = 136). The magnitude of the warming effects on respiration was driven by variation in warming-induced changes in local soil conditions, that is, changes in total nitrogen concentration and pH and by context-dependent spatial variation in these conditions, in particular total nitrogen concentration and the carbon:nitrogen ratio. Tundra sites with stronger nitrogen limitations and sites in which warming had stimulated plant and microbial nutrient turnover seemed particularly sensitive in their respiration response to warming. The results highlight the importance of local soil conditions and warming-induced changes therein for future climatic impacts on respiration.

Biodegradation of microplastic in freshwaters: A long-lasting process affected by the lake microbiome

Plastics have been produced for over a century, but definitive evidence of complete plastic biodegradation in different habitats, particularly freshwater ecosystems, is still missing. Using 13 C-labelled polyethylene microplastics (PE-MP) and stable isotope analysis of produced gas and microbial membrane lipids, we determined the biodegradation rate and fate of carbon in PE-MP in different freshwater types. The biodegradation rate in the humic-lake waters was much higher (0.45% ± 0.21% per year) than in the clear-lake waters (0.07% ± 0.06% per year) or the artificial freshwater medium (0.02% ± 0.02% per year). Complete biodegradation of PE-MP was calculated to last 100-200 years in humic-lake waters, 300-4000 years in clear-lake waters, and 2000-20,000 years in the artificial freshwater medium. The concentration of 18:1ω7, characteristic phospholipid fatty acid in Alpha- and Gammaproteobacteria, was a predictor of faster biodegradation of PE. Uncultured Acetobacteraceae and Comamonadaceae among Alpha- and Gammaproteobacteria, respectively, were major bacteria related to the biodegradation of PE-MP. Overall, it appears that microorganisms in humic lakes with naturally occurring refractory polymers are more adept at decomposing PE than those in other waters.

Studying the priming effect by adding 13 C-labelled glucose to peat samples in two forestry-drained peatland soils with different nutrient status

Land-use changes, such as forestry-drainage, modify the characteristics of peatland soil, which further affect the peatland carbon (C) balance. It has been suggested that peat soil nutrient status, which is mainly a result of the original peatland type, has further an impact on the processes affecting the C balance after drainage. The respiration and priming effect (PE) of peat soils collected from two forestry-drained boreal peatlands with different nutrient status were examined in this two-week laboratory experiment. Half of the samples were labelled with ¹³ C-glucose to study the effect of fresh C addition on the old soil C decomposition. The ¹³ CO₂ -samples were analyzed with IRMS (Isotope Ratio Mass Spectrometer). A two-pool mixing model was applied to separate the soil- and sugar-derived respirations and determining the PE. The nutrient-rich peat soil respired generally more than the nutrient-poor peat. A negative PE was observed in both peat soils, suggesting that the addition of fresh C did not increase the SOM decomposition, but on contrary decreased it. The negative PE was significantly more pronounced in nutrient-poor peat soil than in the nutrient-rich peat treatments, thus higher nutrient availability seemed to suppress the negative PE. These results imply that the microbes prefer utilizing fresh C instead of old C in short-term and that the peat decomposition might be suppressed in presence of fresh C inputs from vegetation at forestry-drained peatlands. These effects are even stronger in peat soils with less nutrients available.

Challenges in measuring nitrogen isotope signatures in inorganic nitrogen forms: An interlaboratory comparison of three common measurement approaches

RATIONALE

Stable isotope approaches are increasingly applied to better understand the cycling of inorganic nitrogen (N_i ) forms, key limiting nutrients in terrestrial and aquatic ecosystems. A systematic comparison of the accuracy and precision of the most commonly used methods to analyze δ¹⁵ N in NO₃ ^- and NH₄ ⁺ and interlaboratory comparison tests to evaluate the comparability of isotope results between laboratories are, however, still lacking.

METHODS

Here, we conducted an interlaboratory comparison involving 10 European laboratories to compare different methods and laboratory performance to measure δ¹⁵ N in NO₃ ^- and NH₄ ⁺ . The approaches tested were (a) microdiffusion (MD), (b) chemical conversion (CM), which transforms N_i to either N₂ O (CM-N₂ O) or N₂ (CM-N₂ ), and (c) the denitrifier (DN) methods.

RESULTS

The study showed that standards in their single forms were reasonably replicated by the different methods and laboratories, with laboratories applying CM-N₂ O performing superior for both NO₃ ^- and NH₄ ⁺ , followed by DN. Laboratories using MD significantly underestimated the "true" values due to incomplete recovery and also those using CM-N₂ showed issues with isotope fractionation. Most methods and laboratories underestimated the at%¹⁵ N of N_i of labeled standards in their single forms, but relative errors were within maximal 6% deviation from the real value and therefore acceptable. The results showed further that MD is strongly biased by nonspecificity. The results of the environmental samples were generally highly variable, with standard deviations (SD) of up to ± 8.4‰ for NO₃ ^- and ± 32.9‰ for NH₄ ⁺ ; SDs within laboratories were found to be considerably lower (on average 3.1‰). The variability could not be connected to any single factor but next to errors due to blank contamination, isotope normalization, and fractionation, and also matrix effects and analytical errors have to be considered.

CONCLUSIONS

The inconsistency among all methods and laboratories raises concern about reported δ¹⁵ N values particularly from environmental samples.

Microbiome assembly in thawing permafrost and its feedbacks to climate

The physical and chemical changes that accompany permafrost thaw directly influence the microbial communities that mediate the decomposition of formerly frozen organic matter, leading to uncertainty in permafrost-climate feedbacks. Although changes to microbial metabolism and community structure are documented following thaw, the generality of post-thaw assembly patterns across permafrost soils of the world remains uncertain, limiting our ability to predict biogeochemistry and microbial community responses to climate change. Based on our review of the Arctic microbiome, permafrost microbiology, and community ecology, we propose that Assembly Theory provides a framework to better understand thaw-mediated microbiome changes and the implications for community function and climate feedbacks. This framework posits that the prevalence of deterministic or stochastic processes indicates whether the community is well-suited to thrive in changing environmental conditions. We predict that on a short timescale and following high-disturbance thaw (e.g., thermokarst), stochasticity dominates post-thaw microbiome assembly, suggesting that functional predictions will be aided by detailed information about the microbiome. At a longer timescale and lower-intensity disturbance (e.g., active layer deepening), deterministic processes likely dominate, making environmental parameters sufficient for predicting function. We propose that the contribution of stochastic and deterministic processes to post-thaw microbiome assembly depends on the characteristics of the thaw disturbance, as well as characteristics of the microbial community, such as the ecological and phylogenetic breadth of functional guilds, their functional redundancy, and biotic interactions. These propagate across space and time, potentially providing a means for predicting the microbial forcing of greenhouse gas feedbacks to global climate change.

Isotopically characterised N2 O reference materials for use as community standards

RATIONALE

Information on the isotopic composition of nitrous oxide (N₂ O) at natural abundance supports the identification of its source and sink processes. In recent years, a number of mass spectrometric and laser spectroscopic techniques have been developed and are increasingly used by the research community. Advances in this active research area, however, critically depend on the availability of suitable N₂ O isotope Reference Materials (RMs).

METHODS

Within the project Metrology for Stable Isotope Reference Standards (SIRS), seven pure N₂ O isotope RMs have been developed and their ¹⁵ N/¹⁴ N, ¹⁸ O/¹⁶ O, ¹⁷ O/¹⁶ O ratios and ¹⁵ N site preference (SP) have been analysed by specialised laboratories against isotope reference materials. A particular focus was on the ¹⁵ N site-specific isotopic composition, as this measurand is both highly diagnostic for source appointment and challenging to analyse and link to existing scales.

RESULTS

The established N₂ O isotope RMs offer a wide spread in delta (δ) values: δ¹⁵ N: 0 to +104‰, δ¹⁸ O: +39 to +155‰, and δ¹⁵ N^SP : -4 to +20‰. Conversion and uncertainty propagation of δ¹⁵ N and δ¹⁸ O to the Air-N₂ and VSMOW scales, respectively, provides robust estimates for δ¹⁵ N(N₂ O) and δ¹⁸ O(N₂ O), with overall uncertainties of about 0.05‰ and 0.15‰, respectively. For δ¹⁵ N^SP , an offset of >1.5‰ compared with earlier calibration approaches was detected, which should be revisited in the future.

CONCLUSIONS

A set of seven N₂ O isotope RMs anchored to the international isotope-ratio scales was developed that will promote the implementation of the recommended two-point calibration approach. Particularly, the availability of δ¹⁷ O data for N₂ O RMs is expected to improve data quality/correction algorithms with respect to δ¹⁵ N^SP and δ¹⁵ N analysis by mass spectrometry. We anticipate that the N₂ O isotope RMs will enhance compatibility between laboratories and accelerate research progress in this emerging field.

Living, dead, and absent trees-How do moth outbreaks shape small-scale patterns of soil organic matter stocks and dynamics at the Subarctic mountain birch treeline?

Mountain birch forests (Betula pubescens Ehrh. ssp. czerepanovii) at the subarctic treeline not only benefit from global warming, but are also increasingly affected by caterpillar outbreaks from foliage-feeding geometrid moths. Both of these factors have unknown consequences on soil organic carbon (SOC) stocks and biogeochemical cycles. We measured SOC stocks down to the bedrock under living trees and under two stages of dead trees (12 and 55 years since moth outbreak) and treeless tundra in northern Finland. We also measured in-situ soil respiration, potential SOC decomposability, biological (enzyme activities and microbial biomass), and chemical (N, mineral N, and pH) soil properties. SOC stocks were significantly higher under living trees (4.1 ± 2.1 kg m²) than in the treeless tundra (2.4 ± 0.6 kg m²), and remained at an elevated level even 12 (3.7 ± 1.7 kg m²) and 55 years (4.9 ± 3.0 kg m²) after tree death. Effects of tree status on SOC stocks decreased with increasing distance from the tree and with increasing depth, that is, a significant effect of tree status was found in the organic layer, but not in mineral soil. Soil under living trees was characterized by higher mineral N contents, microbial biomass, microbial activity, and soil respiration compared with the treeless tundra; soils under dead trees were intermediate between these two. The results suggest accelerated organic matter turnover under living trees but a positive net effect on SOC stocks. Slowed organic matter turnover and continuous supply of deadwood may explain why SOC stocks remained elevated under dead trees, despite the heavy decrease in aboveground C stocks. We conclude that the increased occurrence of moth damage with climate change would have minor effects on SOC stocks, but ultimately decrease ecosystem C stocks (49% within 55 years in this area), if the mountain birch forests will not be able to recover from the outbreaks.

Thawing Yedoma permafrost is a neglected nitrous oxide source

In contrast to the well-recognized permafrost carbon (C) feedback to climate change, the fate of permafrost nitrogen (N) after thaw is poorly understood. According to mounting evidence, part of the N liberated from permafrost may be released to the atmosphere as the strong greenhouse gas (GHG) nitrous oxide (N₂O). Here, we report post-thaw N₂O release from late Pleistocene permafrost deposits called Yedoma, which store a substantial part of permafrost C and N and are highly vulnerable to thaw. While freshly thawed, unvegetated Yedoma in disturbed areas emit little N₂O, emissions increase within few years after stabilization, drying and revegetation with grasses to high rates (548 (133–6286) μg N m⁻² day⁻¹; median with (range)), exceeding by 1–2 orders of magnitude the typical rates from permafrost-affected soils. Using targeted metagenomics of key N cycling genes, we link the increase in in situ N₂O emissions with structural changes of the microbial community responsible for N cycling. Our results highlight the importance of extra N availability from thawing Yedoma permafrost, causing a positive climate feedback from the Arctic in the form of N₂O emissions.

During permafrost thaw, nitrogen can be released as the greenhouse gas nitrous oxide, but the magnitude of this flux is unknown. Nitrous oxide emissions from ice-rich permafrost deposits are reported here, showing that emissions increase after thawing and stabilization and could represent an unappreciated positive climate feedback in the Arctic.

Phosphorus rather than nitrogen regulates ecosystem carbon dynamics after permafrost thaw

Ecosystem carbon (C) dynamics after permafrost thaw depends on more than just climate change since soil nutrient status may also impact ecosystem C balance. It has been advocated that nitrogen (N) release upon permafrost thaw could promote plant growth and thus offset soil C loss. However, compared with the widely accepted C-N interactions, little is known about the potential role of soil phosphorus (P) availability. We combined 3-year field observations along a thaw sequence (constituted by four thaw stages, i.e., non-collapse and 5, 14, and 22 years since collapse) with an in-situ fertilization experiment (included N and P additions at the level of 10 g N m^-2  year^-1 and 10 g P m^-2  year^-1 ) to evaluate ecosystem C-nutrient interactions upon permafrost thaw. We found that changes in soil P availability rather than N availability played an important role in regulating gross primary productivity and net ecosystem productivity along the thaw sequence. The fertilization experiment confirmed that P addition had stronger effects on plant growth than N addition in this permafrost ecosystem. These two lines of evidence highlight the crucial role of soil P availability in altering the trajectory of permafrost C cycle under climate warming.

Statistical upscaling of ecosystem CO2 fluxes across the terrestrial tundra and boreal domain: Regional patterns and uncertainties

The regional variability in tundra and boreal carbon dioxide (CO₂ ) fluxes can be high, complicating efforts to quantify sink-source patterns across the entire region. Statistical models are increasingly used to predict (i.e., upscale) CO₂ fluxes across large spatial domains, but the reliability of different modeling techniques, each with different specifications and assumptions, has not been assessed in detail. Here, we compile eddy covariance and chamber measurements of annual and growing season CO₂ fluxes of gross primary productivity (GPP), ecosystem respiration (ER), and net ecosystem exchange (NEE) during 1990-2015 from 148 terrestrial high-latitude (i.e., tundra and boreal) sites to analyze the spatial patterns and drivers of CO₂ fluxes and test the accuracy and uncertainty of different statistical models. CO₂ fluxes were upscaled at relatively high spatial resolution (1 km² ) across the high-latitude region using five commonly used statistical models and their ensemble, that is, the median of all five models, using climatic, vegetation, and soil predictors. We found the performance of machine learning and ensemble predictions to outperform traditional regression methods. We also found the predictive performance of NEE-focused models to be low, relative to models predicting GPP and ER. Our data compilation and ensemble predictions showed that CO₂ sink strength was larger in the boreal biome (observed and predicted average annual NEE -46 and -29 g C m^-2  yr^-1 , respectively) compared to tundra (average annual NEE +10 and -2 g C m^-2  yr^-1 ). This pattern was associated with large spatial variability, reflecting local heterogeneity in soil organic carbon stocks, climate, and vegetation productivity. The terrestrial ecosystem CO₂ budget, estimated using the annual NEE ensemble prediction, suggests the high-latitude region was on average an annual CO₂ sink during 1990-2015, although uncertainty remains high.

Content of soil-derived carbon in soil biota and fauna living near soil surface: Implications for radioactive waste

¹⁴C is known as one of the radionuclides that have potential to be released into the biosphere from radioactive waste repositories and taken up by organisms. In this study, we used a novel approach to investigate the proportion of soil organic carbon (SOC) in invertebrates and microbial biomass. The study was conducted on a peatland site after the end of peat extraction. There was a large difference in the isotopic abundance of ¹⁴C between the 8000-year-old peat and air. We used a two-pool isotope mixing model to reveal the fraction of soil-derived C in the organisms and in dissolved organic carbon in soil water. The contribution of soil-derived C was found to be highest in microbial biomass (61%) and earthworms (22%). Some contribution of soil-derived C was detected in fungus gnats (2%), but not in other insects or in spiders. These findings are important for developing evidence-based radioecological models based on correct understanding of the relative contributions of atmospheric C vs. SOC in organisms.

Microorganisms in the phylloplane modulate the BVOC emissions of Brassica nigra leaves

Numerous factors can affect the Biogenic Volatile Organic Compounds (BVOC) emitted by plants. One of these factors is the microbial communities living on leaf surfaces (phylloplane). Bacteria and fungi can use compounds produced and emitted by plants for their own metabolism. Thus, microorganism communities can modulate BVOC emissions and affect interactions between plants and other organisms. The aim of this study was to evaluate the role of microbial communities on BVOC emissions of Brassica nigra leaves. Therefore, we removed bacteria and/or fungi by using bactericide/fungicide treatments in a factorial design experiment with Brassica nigra grown in pots. BVOC emissions were sampled before and after the treatment application. Our results showed that four new compounds (cyclohexanone, cyclohexyl cyanide and two unknown compounds) were emitted after the removal of fungi, whereas no effect was detected in response to the bactericide treatment. This suggests that fungi inhibit or reduce the production of the above mentioned BVOCs from Brassica nigra leaves or use those compounds for their own metabolism. The origin and the roles of the novel compounds emitted requires further investigation.

Primary plant succession on freshly degraded yedoma (ice complex) in Lena delta (Eastern Siberia)

Primary plant succession was studied on freshly eroded yedoma in the southern part of Lena River Delta. Four stages of vegetation development were clearly distinguished. The first stage starts on bare ground and lasts from two-three months to one year. Its vegetation is represented only by fragmented cover of young mosses and a few seedlings of vascular plants. The most abundant moss species at this moment is Ceratodon purpureus. The second stage lasts from one to three years depending on slope steepness. Plants cover 20 to 60% of the soil surface. Main dominants are Descurainia sophioides and Tephroseris palustris. The third stage of succession presented by closed species-poor grasslands with Arctagrostis arundinacea as main dominant. This stage lasts for up to 20 years. The fourth stage is represented by species-rich herbaceous communities, which also have Arctagrostis arundinacea as main dominant but enriched with many perennial herbs. There is not enough data to determine the duration of this stage but it is at least few tens of years. This successional system requires a long time for its development. It means that IC degradation is not a recent process but accompanied yedoma deposits through all of its history.

Vertical stratification of bacteria and archaea in sediments of a small boreal humic lake

Although sediments of small boreal humic lakes are important carbon stores and greenhouse gas sources, the composition and structuring mechanisms of their microbial communities have remained understudied. We analyzed the vertical profiles of microbial biomass indicators (PLFAs, DNA and RNA) and the bacterial and archaeal community composition (sequencing of 16S rRNA gene amplicons and qPCR of mcrA) in sediment cores collected from a typical small boreal lake. While microbial biomass decreased with sediment depth, viable microbes (RNA and PLFA) were present all through the profiles. The vertical stratification patterns of the bacterial and archaeal communities resembled those in marine sediments with well-characterized groups (e.g. Methanomicrobia, Proteobacteria, Cyanobacteria, Bacteroidetes) dominating in the surface sediment and being replaced by poorly-known groups (e.g. Bathyarchaeota, Aminicenantes and Caldiserica) in the deeper layers. The results also suggested that, similar to marine systems, the deep bacterial and archaeal communities were predominantly assembled by selective survival of taxa able to persist in the low energy conditions. Methanotrophs were rare, further corroborating the role of these methanogen-rich sediments as important methane emitters. Based on their taxonomy, the deep-dwelling groups were putatively organo-heterotrophic, organo-autotrophic and/or acetogenic and thus may contribute to changes in the lake sediment carbon storage.

Ecosystem carbon response of an Arctic peatland to simulated permafrost thaw

Permafrost peatlands are biogeochemical hot spots in the Arctic as they store vast amounts of carbon. Permafrost thaw could release part of these long-term immobile carbon stocks as the greenhouse gases (GHGs) carbon dioxide (CO₂ ) and methane (CH₄ ) to the atmosphere, but how much, at which time-span and as which gaseous carbon species is still highly uncertain. Here we assess the effect of permafrost thaw on GHG dynamics under different moisture and vegetation scenarios in a permafrost peatland. A novel experimental approach using intact plant-soil systems (mesocosms) allowed us to simulate permafrost thaw under near-natural conditions. We monitored GHG flux dynamics via high-resolution flow-through gas measurements, combined with detailed monitoring of soil GHG concentration dynamics, yielding insights into GHG production and consumption potential of individual soil layers. Thawing the upper 10-15 cm of permafrost under dry conditions increased CO₂ emissions to the atmosphere (without vegetation: 0.74 ± 0.49 vs. 0.84 ± 0.60 g CO₂ -C m^-2  day^-1 ; with vegetation: 1.20 ± 0.50 vs. 1.32 ± 0.60 g CO₂ -C m^-2  day^-1 , mean ± SD, pre- and post-thaw, respectively). Radiocarbon dating (¹⁴ C) of respired CO₂ , supported by an independent curve-fitting approach, showed a clear contribution (9%-27%) of old carbon to this enhanced post-thaw CO₂ flux. Elevated concentrations of CO₂ , CH₄ , and dissolved organic carbon at depth indicated not just pulse emissions during the thawing process, but sustained decomposition and GHG production from thawed permafrost. Oxidation of CH₄ in the peat column, however, prevented CH₄ release to the atmosphere. Importantly, we show here that, under dry conditions, peatlands strengthen the permafrost-carbon feedback by adding to the atmospheric CO₂ burden post-thaw. However, as long as the water table remains low, our results reveal a strong CH₄ sink capacity in these types of Arctic ecosystems pre- and post-thaw, with the potential to compensate part of the permafrost CO₂ losses over longer timescales.

Uptake of Soil-Derived Carbon into Plants: Implications for Disposal of Nuclear Waste

Radiocarbon (¹⁴C) is potentially significant in terms of release from deep geological disposal of radioactive waste and incorporation into the biosphere. In this study we investigated the transfer of soil-derived C into two plant species by using a novel approach, where the uptake of soil-derived C into newly cultivated plants was studied on 8000-year leftover peat in order to distinguish between soil-derived and atmospheric C. Two-pool isotope mixing model was used to reveal the fraction of soil C in plants. Our results indicated that although the majority of plant C was obtained from atmosphere by photosynthesis, a significant portion (up to 3-5%) of C in plant roots was derived from old soil. We found that uptake of soil C into roots was more pronounced in ectomycorrhizal Scots pine than in endomycorrhizal reed canary grass, but nonetheless, both species showed soil-derived C uptake in their roots. Although plenty of soil-derived C was available in canopy air for reassimilation by photosynthesis, no trace of soil-derived C was detected in aboveground parts, possibly due to the open canopy. The results suggest that the potential for contamination with ¹⁴C is higher for roots than for leaves.

Tundra landscape heterogeneity, not interannual variability, controls the decadal regional carbon balance in the Western Russian Arctic

Across the Arctic, the net ecosystem carbon (C) balance of tundra ecosystems is highly uncertain due to substantial temporal variability of C fluxes and to landscape heterogeneity. We modeled both carbon dioxide (CO₂ ) and methane (CH₄ ) fluxes for the dominant land cover types in a ~100-km² sub-Arctic tundra region in northeast European Russia for the period of 2006-2015 using process-based biogeochemical models. Modeled net annual CO₂ fluxes ranged from -300 g C m^-2  year^-1 [net uptake] in a willow fen to 3 g C m^-2  year^-1 [net source] in dry lichen tundra. Modeled annual CH₄ emissions ranged from -0.2 to 22.3 g C m^-2  year^-1 at a peat plateau site and a willow fen site, respectively. Interannual variability over the decade was relatively small (20%-25%) in comparison with variability among the land cover types (150%). Using high-resolution land cover classification, the region was a net sink of atmospheric CO₂ across most land cover types but a net source of CH₄ to the atmosphere due to high emissions from permafrost-free fens. Using a lower resolution for land cover classification resulted in a 20%-65% underestimation of regional CH₄ flux relative to high-resolution classification and smaller (10%) overestimation of regional CO₂ uptake due to the underestimation of wetland area by 60%. The relative fraction of uplands versus wetlands was key to determining the net regional C balance at this and other Arctic tundra sites because wetlands were hot spots for C cycling in Arctic tundra ecosystems.

Warming of subarctic tundra increases emissions of all three important greenhouse gases - carbon dioxide, methane, and nitrous oxide

Rapidly rising temperatures in the Arctic might cause a greater release of greenhouse gases (GHGs) to the atmosphere. To study the effect of warming on GHG dynamics, we deployed open-top chambers in a subarctic tundra site in Northeast European Russia. We determined carbon dioxide (CO₂ ), methane (CH₄ ), and nitrous oxide (N₂ O) fluxes as well as the concentration of those gases, inorganic nitrogen (N) and dissolved organic carbon (DOC) along the soil profile. Studied tundra surfaces ranged from mineral to organic soils and from vegetated to unvegetated areas. As a result of air warming, the seasonal GHG budget of the vegetated tundra surfaces shifted from a GHG sink of -300 to -198 g CO₂ -eq m^-2 to a source of 105 to 144 g CO₂ -eq m^-2 . At bare peat surfaces, we observed increased release of all three GHGs. While the positive warming response was dominated by CO₂ , we provide here the first in situ evidence of increasing N₂ O emissions from tundra soils with warming. Warming promoted N₂ O release not only from bare peat, previously identified as a strong N₂ O source, but also from the abundant, vegetated peat surfaces that do not emit N₂ O under present climate. At these surfaces, elevated temperatures had an adverse effect on plant growth, resulting in lower plant N uptake and, consequently, better N availability for soil microbes. Although the warming was limited to the soil surface and did not alter thaw depth, it increased concentrations of DOC, CO_2, and CH₄ in the soil down to the permafrost table. This can be attributed to downward DOC leaching, fueling microbial activity at depth. Taken together, our results emphasize the tight linkages between plant and soil processes, and different soil layers, which need to be taken into account when predicting the climate change feedback of the Arctic.

Effects of prolonged drought stress on Scots pine seedling carbon allocation

As the number of drought occurrences has been predicted to increase with increasing temperatures, it is believed that boreal forests will become particularly vulnerable to decreased growth and increased tree mortality caused by the hydraulic failure, carbon starvation and vulnerability to pests following these. Although drought-affected trees are known to have stunted growth, as well as increased allocation of carbon to roots, still not enough is known about the ways in which trees can acclimate to drought. We studied how drought stress affects belowground and aboveground carbon dynamics, as well as nitrogen uptake, in Scots pine (Pinus sylvestris L.) seedlings exposed to prolonged drought. Overall 40 Scots pine seedlings were divided into control and drought treatments over two growing seasons. Seedlings were pulse-labelled with 13CO2 and litter bags containing 15N-labelled root biomass, and these were used to follow nutrient uptake of trees. We determined photosynthesis, biomass distribution, root and rhizosphere respiration, water potential, leaf osmolalities and carbon and nitrogen assimilation patterns in both treatments. The photosynthetic rate of the drought-induced seedlings did not decrease compared to the control group, the maximum leaf specific photosynthetic rate being 0.058 and 0.045 µmol g-1 s-1 for the drought and control treatments, respectively. The effects of drought were, however, observed as lower water potentials, increased osmolalities as well as decreased growth and greater fine root-to-shoot ratio in the drought-treated seedlings. We also observed improved uptake of labelled nitrogen from soil to needles in the drought-treated seedlings. The results indicate acclimation of seedlings to long-term drought by aiming to retain sufficient water uptake with adequate allocation to roots and root-associated mycorrhizal fungi. The plants seem to control water potential with osmolysis, for which sufficient photosynthetic capability is needed.

Inferring Phytoplankton, Terrestrial Plant and Bacteria Bulk δ¹³C Values from Compound Specific Analyses of Lipids and Fatty Acids

Stable isotope mixing models in aquatic ecology require δ¹³C values for food web end members such as phytoplankton and bacteria, however it is rarely possible to measure these directly. Hence there is a critical need for improved methods for estimating the δ¹³C ratios of phytoplankton, bacteria and terrestrial detritus from within mixed seston. We determined the δ¹³C values of lipids, phospholipids and biomarker fatty acids and used these to calculate isotopic differences compared to the whole-cell δ¹³C values for eight phytoplankton classes, five bacterial taxa, and three types of terrestrial organic matter (two trees and one grass). The lipid content was higher amongst the phytoplankton (9.5±4.0%) than bacteria (7.3±0.8%) or terrestrial matter (3.9±1.7%). Our measurements revealed that the δ¹³C values of lipids followed phylogenetic classification among phytoplankton (78.2% of variance was explained by class), bacteria and terrestrial matter, and there was a strong correlation between the δ¹³C values of total lipids, phospholipids and individual fatty acids. Amongst the phytoplankton, the isotopic difference between biomarker fatty acids and bulk biomass averaged -10.7±1.1‰ for Chlorophyceae and Cyanophyceae, and -6.1±1.7‰ for Cryptophyceae, Chrysophyceae and Diatomophyceae. For heterotrophic bacteria and for type I and type II methane-oxidizing bacteria our results showed a -1.3±1.3‰, -8.0±4.4‰, and -3.4±1.4‰ δ¹³C difference, respectively, between biomarker fatty acids and bulk biomass. For terrestrial matter the isotopic difference averaged -6.6±1.2‰. Based on these results, the δ¹³C values of total lipids and biomarker fatty acids can be used to determine the δ¹³C values of bulk phytoplankton, bacteria or terrestrial matter with ± 1.4‰ uncertainty (i.e., the pooled SD of the isotopic difference for all samples). We conclude that when compound-specific stable isotope analyses become more widely available, the determination of δ¹³C values for selected biomarker fatty acids coupled with established isotopic differences, offers a promising way to determine taxa-specific bulk δ¹³C values for the phytoplankton, bacteria, and terrestrial detritus embedded within mixed seston.

Trophic transfer of polychlorinated biphenyls (PCB) in a boreal lake ecosystem: testing of bioaccumulation models

Understanding the fate of persistent organic chemicals in the environment is fundamental information for the successful protection of ecosystems and humans. A common dilemma in risk assessment is that monitoring data reveals contaminant concentrations in wildlife, while the source concentrations, route of uptake and acceptable source concentrations remain unsolved. To overcome this problem, different models have been developed in order to obtain more precise risk estimates for the food webs. However, there is still an urgent need for studies combining modelled and measured data in order to verify the functionality of the models. Studies utilising field-collected data covering entire food webs are particularly scarce. This study aims to contribute to tackling this problem by determining the validity of two bioaccumulation models, BIOv1.22 and AQUAWEBv1.2, for application to a multispecies aquatic food web. A small boreal lake, Lake Kernaalanjärvi, in Finland was investigated for its food web structure and concentrations of PCBs in all trophic levels. Trophic magnification factors (TMFs) were used to measure the bioaccumulation potential of PCBs, and the site-specific environmental parameters were used to compare predicted and observed concentrations. Site-specific concentrations in sediment pore water did not affect the modelling endpoints, but accurate site-specific measurements of freely dissolved concentrations in water turned out to be crucial for obtaining realistic model-predicted concentrations in biota. Numerous parameters and snapshot values affected the model performances, bringing uncertainty into the process and results, but overall, the models worked well for a small boreal lake ecosystem. We suggest that these models can be optimised for different ecosystems and can be useful tools for estimating the bioaccumulation and environmental fate of PCBs.

Interactive effects of elevated ozone and temperature on carbon allocation of silver birch (Betula pendula) genotypes in an open-air field exposure

In the present experiment, the single and combined effects of elevated temperature and ozone (O(3)) on four silver birch genotypes (gt12, gt14, gt15 and gt25) were studied in an open-air field exposure design. Above- and below-ground biomass accumulation, stem growth and soil respiration were measured in 2008. In addition, a (13)C-labelling experiment was conducted with gt15 trees. After the second exposure season, elevated temperature increased silver birch above- and below-ground growth and soil respiration rates. However, some of these variables showed that the temperature effect was modified by tree genotype and prevailing O(3) level. For instance, in gt14 soil respiration was increased in elevated temperature alone (T) and in elevated O(3) and elevated temperature in combination (O(3) + T) treatments, but in other genotypes O(3) either partly (gt12) or totally nullified (gt25) temperature effects on soil respiration, or acted synergistically with temperature (gt15). Before leaf abscission, all genotypes had the largest leaf biomass in T and O(3) + T treatments, whereas at the end of the season temperature effects on leaf biomass depended on the prevailing O(3) level. Temperature increase thus delayed and O(3) accelerated leaf senescence, and in combination treatment O(3) reduced the temperature effect. Photosynthetic : non-photosynthetic tissue ratios (P : nP ratios) showed that elevated temperature increased foliage biomass relative to woody mass, particularly in gt14 and gt12, whereas O(3) and O(3) + T decreased it most clearly in gt25. O(3)-caused stem growth reductions were clearest in the fastest-growing gt14 and gt25, whereas mycorrhizal root growth and sporocarp production increased under O(3) in all genotypes. A labelling experiment showed that temperature increased tree total biomass and hence (13)C fixation in the foliage and roots and also label return was highest under elevated temperature. Ozone seemed to change tree (13)C allocation, as it decreased foliar (13)C excess amount, simultaneously increasing (13)C excess obtained from the soil. The present results suggest that warming has potential to increase silver birch growth and hence carbon (C) accumulation in tree biomass, but the final magnitude of this C sink strength is partly counteracted by temperature-induced increase in soil respiration rates and simultaneous O(3) stress. Silver birch populations' response to climate change will also largely depend on their genotype composition.

Temperature-dependent shift from labile to recalcitrant carbon sources of arctic heterotrophs

Soils of high latitudes store approximately one-third of the global soil carbon pool. Decomposition of soil organic matter (SOM) is expected to increase in response to global warming, which is most pronounced in northern latitudes. It is, however, unclear if microorganisms are able to utilize more stable, recalcitrant C pools, when labile soil carbon pools will be depleted due to increasing temperatures. Here we report on an incubation experiment with intact soil cores of a frost-boil tundra ecosystem at three different temperatures (2 degrees C, 12 degrees C and 24 degrees C). In order to assess which fractions of the SOM are available for decomposition at various temperatures, we analyzed the isotopic signature of respired CO2 and of different SOM fractions. The delta13C values of CO2 respired were negatively correlated with temperature, indicating the utilization of SOM fractions that were depleted in 13C at higher temperatures. Chemical fractionation of SOM showed that the water-soluble fraction (presumably the most easily available substrates for microbial respiration) was most enriched in 13C, while the acid-insoluble pool (recalcitrant substrates) was most depleted in 13C. Our results therefore suggest that, at higher temperatures, recalcitrant compounds are preferentially respired by arctic microbes. When the isotopic signatures of respired CO2 of soils which had been incubated at 24 degrees C were measured at 12 degrees C, the delta13C values shifted to values found in soils incubated at 12 degrees C, indicating the reversible use of more easily available substrates. Analysis of phospholipid fatty acid profiles showed significant differences in microbial community structure at various incubation temperatures indicating that microorganisms with preference for more recalcitrant compounds establish as temperatures increase. In summary our results demonstrate that a large portion of tundra SOM is potentially mineralizable.

Action of adenosine on energetics, protein synthesis and K(+) homeostasis in teleost hepatocytes

In a comparative study, we analysed the effects of adenosine on the energetics, protein synthesis and K(+)homeostasis of hepatocytes from the anoxia-tolerant goldfish Carassius auratus and the anoxia-intolerant trout Oncorhynchus mykiss. The rate of oxygen consumption did not respond immediately to the addition of adenosine to the cells from either species, but showed a significant decrease in trout hepatocytes after 30 min. The anaerobic rate of lactate formation was not significantly affected by adenosine in goldfish hepatocytes, but was increased in trout cells. We also studied the effects of adenosine on the two most prominent ATP consumers in these cells, protein synthesis and Na(+)/K(+)-ATPase activity. Under aerobic conditions, adenosine inhibited protein synthesis of hepatocytes from goldfish by 51% and of hepatocytes from trout by 32%. During anoxia, the rate of protein synthesis decreased by approximately 50% in goldfish hepatocytes and by 90% in trout hepatocytes, and this decrease was not altered by the presence of adenosine. Adenosine inhibited normoxic Na(+)/K(+)-ATPase activity and K(+)efflux by 20–35% in the cells of both species. An investigation into the mechanism underlying the inhibition of protein synthesis by adenosine indicated that, in the goldfish cells, adenosine acts via a membrane receptor-mediated pathway, i.e. the effect of adenosine was abolished by applying the A1 receptor antagonist 8-phenyltheophylline. In the trout, however, the uptake of adenosine into hepatocytes seems to be required for an effect on protein synthesis. [Ca(2+)](i) does not seem to be involved in the inhibition of protein synthesis by adenosine.

[Reconstructive surgery of the mitral and tricuspid valves with a Cosgrove-Edwards flexible ring]

BACKGROUND

Mitral and tricuspid valve asymmetric annular dilation represents the most important mechanism which produces insufficiency. Recent computerized in vitro and in vivo three-dimensional models have been developed in order to better understand the competing factors (annular dilation, displacement of papillary muscles, left and right ventricular geometry). The leading cause of mitral and tricuspid competence is a sphincteric action of both annuli, during systole and diastole, the loss of which produces asymmetric dilation and therefore the absence of cusp coaptation. The Cosgrove-Edwards dynamic ring corrects, alone or in combination with other procedures on the valves, this patho-anatomic feature in a physiological way by restoring the normal annular dimensions and the sphincteric movements during the cardiac cycle.

METHODS

Between June 1998 and May 1999, 30 adult patients underwent mitral (n = 20, Group I) or tricuspid valve repair (n = 10, Group II). Regurgitation was due to a degenerative disease in 13 Group I patients and to ischemic (n = 3), congenital (n = 2) or dilated cardiomyopathy (n = 2) in the others. In Group II the leading cause of insufficiency was functional regurgitation in 7 patients and organic in 3. Associated procedures were carried out in 4 Group I patients and in all Group II patients. Regurgitation was evaluated by transesophageal echocardiography before, during and 3 months after operation. The maximal regurgitant area (MRA) and the grade of insufficiency were evaluated using the equation: MRA < 2 cm2 = grade 0, MRA > 2 < 4 cm2 = 1+, MRA > 4 < 7 cm2 = grade 2+, MRA > 7 < 10 cm2 = 3+, MRA > 10 cm2 = 4+.

RESULTS

The operative mortality was 0%. One Group I patient died 3 months after operation due to bronchopneumonia. No patient was reoperated on for plasty failure in both groups during the follow-up. Mitral insufficiency was absent (grade 0) in 17 Group I patients and mild (grade 1+) in 3 at the end of operation. At 3-month postoperative transesophageal echocardiographic control mitral insufficiency was absent in 14 patients, mild (1+) in 4 and moderate (2+) in 2. MRA was 3 cm2 in the 2 patients operated on for dilated cardiomyopathy and < 3 cm2 in the others. Preoperative tricuspid insufficiency of grade 4+ in all Group II patients became absent in 9 of them either at the end of operation or at 3-month postoperative control.

CONCLUSIONS

The Cosgrove-Edwards dynamic ring as isolated device or in combination with other plasty mitral or tricuspid procedures is a safe, simple, and reproducible method to restore the distorted motion of valvular annuli. It preserves the sphincteric mechanism of the valve and allows for the coaptation of cusps. Although in a small number of patients and for a short period of follow-up our experience corroborates what other more consistent series of patients operated on have shown.

Oxygen-dependent energetics of anoxia-tolerant and anoxia-intolerant hepatocytes

The oxygen-dependence of cellular energetics was investigated in hepatocytes from goldfish Carassius auratus (anoxia-tolerant) and rainbow trout Oncorhynchus mykiss (anoxia-intolerant). In goldfish hepatocytes, an approximately 50 % reduction in the rate of oxygen consumption was observed in response to both acute and prolonged hypoxia, the latter treatment shifting the threshold for this reduction to a higher oxygen level. A concomitant increase in the rate of lactate production did not compensate for the decreased aerobic ATP supply, resulting in an overall metabolic depression of 26 % during acute hypoxia and of 42 % during prolonged hypoxia. Trout hepatocytes showed a similar suppression of cellular respiration after prolonged hypoxia but were unresponsive to acute hypoxia. Similarly, the rate of lactate production was unaltered during acute hypoxia but was increased during prolonged hypoxia, metabolic depression amounting to 7 % during acute hypoxia and 30 % during prolonged hypoxia. In both species, the affinity of hepatocytes for oxygen decreased during hypoxia, but this alteration was not sufficient in absolute terms to account for the observed decrease in aerobic ATP supply. Protein synthesis was suppressed in both cell types under hypoxia, whereas Na(+)/K(+)-ATPase activity decreased in trout but not in goldfish hepatocytes, emphasising the importance of membrane function in these cells during conditions of limited energy supply.

Effects of energy limitation on Ca2+ and K+ homeostasis in anoxia-tolerant and anoxia-intolerant hepatocytes

To gain more insight into the mechanistic basis of anoxia tolerance and intolerance, a comparative study was conducted on calcium homeostasis in goldfish and trout hepatocytes subjected to different forms of energy limitation. Using the fluorescent Ca2+ indicator fura 2, we observed that both chemical anoxia and true anoxia led to an increase of the concentration of cytosolic free calcium (Ca2+i) in the anoxia-sensitive hepatocytes of rainbow trout, whereas Ca2+i was maintained at control levels in the anoxia-tolerant hepatocytes of goldfish. Various lines of evidence suggest an intracellular origin of the Ca2+ increase observed in trout cells. Cyclosporin A, a specific inhibitor of the mitochondrial permeability transition pore in mammalian cells, was ineffective in preventing the Ca2+ increase, whereas a high dose of fructose depressed the Ca2+ surge by approximately 50%. The latter effect was not accompanied by improvement of the energetic state of the cells. A comparison of chemical anoxia with true (physiological) anoxia revealed that both treatments affected energy metabolism to a similar degree in trout hepatocytes, whereas the decrease of ATP seen in goldfish hepatocytes during chemical anoxia was absent during true anoxia. Elevation of Ca2+i with the calcium ionophore A-23187 led to a decoupling of unidirectional K+ fluxes in both normoxic and anoxic trout cells, whereas in goldfish hepatocytes the coupling of K+ fluxes was not affected by the rise of Ca2+i.

Acute and chronic effects of temperature, and of nutritional state, on ion homeostasis and energy metabolism in teleost hepatocytes

Short- and long-term effects of temperature on ion flux and energy turnover were studied in hepatocytes from thermally acclimated trout and roach. In trout hepatocytes K+ efflux was insensitive towards acute exposure to low temperature but was downregulated during cold acclimation of the fish so as to balance the uncompensated decreased K+ (Rb+) uptake of the cells. In contrast, both K+ (Rb+) uptake and K+ efflux of roach hepatocytes were temperature sensitive in the short term. These acute effects, however, were offset during cold acclimation by a near perfect compensation of both fluxes leading to re-establishment of ion flux homeostasis at the original level. Our findings, based on a new method permitting the simultaneous monitoring of K+ efflux and uptake in the same cell population, provide experimental verification of two of the three possible strategies, recently discussed by Cossins et al. (1995), by which the ionic steady state of fish cells may adjust to acute and chronic temperature change. By comparing hepatocytes from two groups of trout, one kept on a maintenance diet (ration I), the other fed ad libitum (ration II), we discovered striking effects of nutritional state on the absolute levels as well as on the temperature relationships of K+ uptake and protein synthetic activity. Both of these functions in the hepatocytes increased in the ration II fed as compared to the ration I fed trouts, but the increase of protein synthetic activity was greater and more uniform at the three experimental temperatures than that of K+ uptake. Moreover, protein synthetic activity proved to be considerably more temperature sensitive than K+ uptake and, in contrast to the latter, showed a compensatory response after cold acclimation.

Membrane-metabolic coupling and ion homeostasis in anoxia-tolerant and anoxia-intolerant hepatocytes

The relationship between membrane function and energy metabolism was studied in rainbow trout hepatocytes, an anoxia-intolerant cell system, and compared with the situation in hepatocytes from the goldfish, a typical anoxia-tolerant species. In trout hepatocytes, under normoxia and under chemical anoxia, inhibition of ATP consumption by the Na+ pump induced a decrease in ATP production of the same magnitude. In response to chemical anoxia, total ATP production was reduced to 15% and Na+ pump activity to 22% of the control rate under normoxia. Measurement of the cellular ATP content under these conditions revealed that, despite the reduction in Na+ pump activity, the cells became rapidly depleted of ATP, with the time course of this process resembling that observed in the anoxic rat hepatocyte. This is in contrast to the responses of goldfish hepatocytes, where, during chemical anoxia, 1) inhibition of the Na+ pump did not lead to a corresponding reduction in ATP production and 2) ATP levels, after a transient decrease, stabilized at a new steady state. To investigate the consequences of chemical anoxia on ion homeostasis, efflux and uptake rates of K+ were determined simultaneously. In the trout cells, chemical anoxia led to a decoupling of influx and efflux rates, the latter exceeding the former three- to eightfold. In contrast, goldfish hepatocytes were able to preserve ion homeostasis by a concerted decrease in Rb+ uptake and K+ efflux, so that the net flux of K+ was always close to zero. In neither species did chemical anoxia induce a change in pump density. Other potential control mechanisms are briefly discussed.

[Emergencies in ambulatory dentistry]

The most frequent critical situations that could happen in outpatient dental practice are analyzed and emergency treatment is proposed. Further, a full emergency set (both drugs and devices) is proposed as standard dotation.