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Champagne C, Gerhards M, Lana JT, Le Menach A, Pothin E. Quantifying the impact of interventions against Plasmodium vivax: A model for country-specific use. Epidemics 2024; 46:100747. [PMID: 38330786 PMCID: PMC10944169 DOI: 10.1016/j.epidem.2024.100747] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Revised: 11/03/2023] [Accepted: 01/23/2024] [Indexed: 02/10/2024] Open
Abstract
In order to evaluate the impact of various intervention strategies on Plasmodium vivax dynamics in low endemicity settings without significant seasonal pattern, we introduce a simple mathematical model that can be easily adapted to reported case numbers similar to that collected by surveillance systems in various countries. The model includes case management, vector control, mass drug administration and reactive case detection interventions and is implemented in both deterministic and stochastic frameworks. It is available as an R package to enable users to calibrate and simulate it with their own data. Although we only illustrate its use on fictitious data, by simulating and comparing the impact of various intervention combinations on malaria risk and burden, this model could be a useful tool for strategic planning, implementation and resource mobilization.
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Affiliation(s)
- C Champagne
- Swiss Tropical and Public Health Institute, Basel, Switzerland; University of Basel, Basel, Switzerland.
| | - M Gerhards
- Swiss Tropical and Public Health Institute, Basel, Switzerland; University of Basel, Basel, Switzerland
| | - J T Lana
- Clinton Health Access Initiative, Boston, USA
| | - A Le Menach
- Clinton Health Access Initiative, Boston, USA
| | - E Pothin
- Swiss Tropical and Public Health Institute, Basel, Switzerland; University of Basel, Basel, Switzerland; Clinton Health Access Initiative, Boston, USA
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Bakouny Z, Labaki C, Bhalla S, Schmidt AL, Steinharter JA, Cocco J, Tremblay DA, Awad MM, Kessler A, Haddad RI, Evans M, Busser F, Wotman M, Curran CR, Zimmerman BS, Bouchard G, Jun T, Nuzzo PV, Qin Q, Hirsch L, Feld J, Kelleher KM, Seidman D, Huang H, Anderson-Keightly HM, El Zarif T, Alaiwi SA, Champagne C, Rosenbloom TD, Stewart PS, Johnson BE, Trinh Q, Tolaney SM, Galsky MD, Choueiri TK, Doroshow DB. Oncology clinical trial disruption during the COVID-19 pandemic: a COVID-19 and cancer outcomes study. Ann Oncol 2022; 33:836-844. [PMID: 35715285 PMCID: PMC9197329 DOI: 10.1016/j.annonc.2022.04.071] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2021] [Revised: 03/14/2022] [Accepted: 04/18/2022] [Indexed: 12/01/2022] Open
Abstract
Background COVID-19 disproportionately impacted patients with cancer as a result of direct infection, and delays in diagnosis and therapy. Oncological clinical trials are resource-intensive endeavors that could be particularly susceptible to disruption by the pandemic, but few studies have evaluated the impact of the pandemic on clinical trial conduct. Patients and methods This prospective, multicenter study assesses the impact of the pandemic on therapeutic clinical trials at two large academic centers in the Northeastern United States between December 2019 and June 2021. The primary objective was to assess the enrollment on, accrual to, and activation of oncology therapeutic clinical trials during the pandemic using an institution-wide cohort of (i) new patient accruals to oncological trials, (ii) a manually curated cohort of patients with cancer, and (ii) a dataset of new trial activations. Results The institution-wide cohort included 4756 new patients enrolled to clinical trials from December 2019 to June 2021. A major decrease in the numbers of new patient accruals (−46%) was seen early in the pandemic, followed by a progressive recovery and return to higher-than-normal levels (+2.6%). A similar pattern (from −23.6% to +30.4%) was observed among 467 newly activated trials from June 2019 to June 2021. A more pronounced decline in new accruals was seen among academically sponsored trials (versus industry sponsored trials) (P < 0.05). In the manually curated cohort, which included 2361 patients with cancer, non-white patients tended to be more likely taken off trial in the early pandemic period (adjusted odds ratio: 2.60; 95% confidence interval 1.00-6.63), and substantial pandemic-related deviations were recorded. Conclusions Substantial disruptions in clinical trial activities were observed early during the pandemic, with a gradual recovery during ensuing time periods, both from an enrollment and an activation standpoint. The observed decline was more prominent among academically sponsored trials, and racial disparities were seen among people taken off trial.
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Affiliation(s)
- Z Bakouny
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - C Labaki
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - S Bhalla
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | - A L Schmidt
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - J A Steinharter
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - J Cocco
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | - D A Tremblay
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | - M M Awad
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - A Kessler
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | - R I Haddad
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - M Evans
- Department of Medicine, Icahn School of Medicine at Mount Sinai Hospital, New York, USA
| | - F Busser
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - M Wotman
- Department of Medicine, Icahn School of Medicine at Mount Sinai Hospital, New York, USA
| | - C R Curran
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - B S Zimmerman
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | - G Bouchard
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - T Jun
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | - P V Nuzzo
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - Q Qin
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | - L Hirsch
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - J Feld
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | - K M Kelleher
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - D Seidman
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | - H Huang
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | | | - T El Zarif
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - S Abou Alaiwi
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - C Champagne
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - T D Rosenbloom
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | - P S Stewart
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | - B E Johnson
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - Q Trinh
- Division of Urological Surgery, Brigham and Women's Hospital, Boston, USA
| | - S M Tolaney
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA
| | - M D Galsky
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA
| | - T K Choueiri
- Department of Medical Oncology, Dana Farber Cancer Institute, Boston, USA.
| | - D B Doroshow
- Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York City, USA.
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Champagne C, Rajkumar AS, Auxila P, Perrone G, Plötz M, Young A, Bazaz Jazayeri S, Napier HG, Le Menach A, Battle K, Amratia P, Cameron E, Alfred JP, Deslouches YG, Pothin E. Improving access to care and community health in Haiti with optimized community health worker placement. PLOS Glob Public Health 2022; 2:e0000167. [PMID: 36962155 PMCID: PMC10022239 DOI: 10.1371/journal.pgph.0000167] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Accepted: 03/09/2022] [Indexed: 11/18/2022]
Abstract
The national deployment of polyvalent community health workers (CHWs) is a constitutive part of the strategy initiated by the Ministry of Health to accelerate efforts towards universal health coverage in Haiti. Its implementation requires the planning of future recruitment and deployment activities for which mathematical modelling tools can provide useful support by exploring optimised placement scenarios based on access to care and population distribution. We combined existing gridded estimates of population and travel times with optimisation methods to derive theoretical CHW geographical placement scenarios including constraints on walking time and the number of people served per CHW. Four national-scale scenarios that align with total numbers of existing CHWs and that ensure that the walking time for each CHW does not exceed a predefined threshold are compared. The first scenario accounts for population distribution in rural and urban areas only, while the other three also incorporate in different ways the proximity of existing health centres. Comparing these scenarios to the current distribution, insufficient number of CHWs is systematically identified in several departments and gaps in access to health care are identified within all departments. These results highlight current suboptimal distribution of CHWs and emphasize the need to consider an optimal (re-)allocation.
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Affiliation(s)
- Clara Champagne
- Department of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, Basel, Switzerland
- University of Basel, Basel, Switzerland
| | | | - Paul Auxila
- Global Financing Facility, Port-au-Prince, Haiti
| | | | - Marvin Plötz
- World Bank, Washington, DC, United States of America
| | - Alyssa Young
- Clinton Health Access Initiative, Port-au-Prince, Haiti
- Department of Tropical Medicine, Tulane University School of Public Health and Tropical Medicine, New Orleans, LA, United States of America
| | - Samuel Bazaz Jazayeri
- Department of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, Basel, Switzerland
- University of Basel, Basel, Switzerland
| | - Harriet G. Napier
- Clinton Health Access Initiative, Boston, MA, United States of America
| | - Arnaud Le Menach
- Clinton Health Access Initiative, Boston, MA, United States of America
| | - Katherine Battle
- Institute for Disease Modeling, Seattle, WA, United States of America
| | | | | | | | | | - Emilie Pothin
- Department of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, Basel, Switzerland
- University of Basel, Basel, Switzerland
- Clinton Health Access Initiative, Boston, MA, United States of America
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Léveillée S, Vignola-Lévesque C, Brisson M, Champagne C. Enjeux psychosociaux des auteurs de violences conjugales sexuelles. Sexologies 2022. [DOI: 10.1016/j.sexol.2021.07.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Champagne C, Gerhards M, Lana J, García Espinosa B, Bradley C, González O, Cohen JM, Le Menach A, White MT, Pothin E. Using observed incidence to calibrate the transmission level of a mathematical model for Plasmodium vivax dynamics including case management and importation. Math Biosci 2021; 343:108750. [PMID: 34883106 PMCID: PMC8786669 DOI: 10.1016/j.mbs.2021.108750] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2021] [Revised: 10/29/2021] [Accepted: 10/29/2021] [Indexed: 11/27/2022]
Abstract
In this work, we present a simple and flexible model for Plasmodium vivax dynamics which can be easily combined with routinely collected data on local and imported case counts to quantify transmission intensity and simulate control strategies. This model extends the model from White et al. (2016) by including case management interventions targeting liver-stage or blood-stage parasites, as well as imported infections. The endemic steady state of the model is used to derive a relationship between the observed incidence and the transmission rate in order to calculate reproduction numbers and simulate intervention scenarios. To illustrate its potential applications, the model is used to calculate local reproduction numbers in Panama and identify areas of sustained malaria transmission that should be targeted by control interventions.
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Affiliation(s)
- Clara Champagne
- Swiss Tropical and Public Health Institute, Socinstrasse 57, P.O. Box, Basel, CH-4002, Switzerland; University of Basel, Petersplatz 1, P.O. Box, Basel, CH-4001, Switzerland.
| | - Maximilian Gerhards
- Swiss Tropical and Public Health Institute, Socinstrasse 57, P.O. Box, Basel, CH-4002, Switzerland; University of Basel, Petersplatz 1, P.O. Box, Basel, CH-4001, Switzerland
| | - Justin Lana
- Clinton Health Access Initiative, 383 Dorchester Ave, Suite 400, Boston, 02127, MA, USA
| | | | - Christina Bradley
- Clinton Health Access Initiative, 383 Dorchester Ave, Suite 400, Boston, 02127, MA, USA
| | - Oscar González
- Ministerio de Salud de Panama, Calle culebra, Edificio 265 del Ministerio de Salud, Corregimiento de Ancón, Panama
| | - Justin M Cohen
- Clinton Health Access Initiative, 383 Dorchester Ave, Suite 400, Boston, 02127, MA, USA
| | - Arnaud Le Menach
- Clinton Health Access Initiative, 383 Dorchester Ave, Suite 400, Boston, 02127, MA, USA
| | - Michael T White
- Institut Pasteur, Université de Paris, G5 Épidémiologie et Analyse des Maladies Infectieuses, Département de Santé Globale, Paris, F-75015, France
| | - Emilie Pothin
- Swiss Tropical and Public Health Institute, Socinstrasse 57, P.O. Box, Basel, CH-4002, Switzerland; University of Basel, Petersplatz 1, P.O. Box, Basel, CH-4001, Switzerland; Clinton Health Access Initiative, 383 Dorchester Ave, Suite 400, Boston, 02127, MA, USA
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Cummins DM, Marshall C, Asfour L, Bryden A, Champagne C, Chiang YZ, Fairhurst D, Farrant P, Heal C, Holmes S, Joliffe V, Jones J, Kaur MR, Meah N, Messenger A, Mowbray M, Takwale A, Tziotzios C, Wade M, Wong S, Zaheri S, Harries M. Frontal Fibrosing Alopecia survey of severity assessment methods in routine clinical practice and validation of the IFFACG measurement guidance. Clin Exp Dermatol 2021; 47:903-909. [PMID: 34826169 DOI: 10.1111/ced.15035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2021] [Revised: 11/05/2021] [Accepted: 11/22/2021] [Indexed: 11/30/2022]
Abstract
BACKGROUND Lack of validated and responsive outcome measures in the management of Frontal Fibrosing Alopecia (FFA) significantly limits our ability to assess disease progression and treatment response over time. OBJECTIVES The aim of this study was to understand how FFA extent and progression is currently assessed in UK specialist centres, validate components of the International FFA Cooperative Group (IFFACG) statement on FFA assessment, and identify pragmatic advice to improve FFA management in clinic. METHODS Consultant Dermatologists with a specialist interest in hair loss (n=17) were invited to take part. Preferred FFA assessment methods were explored using questionnaires and clinical scenarios. Participants were asked to identify and mark the current hairline in 10 frontal and 10 temporal hairline images, with assessment repeated 3 months later (to assess intra-individual variability) and 12 months later (to test whether inter-individual accuracy could be improved with simple instruction). RESULTS All 17 clinicians (100%) completed the questionnaire at each time interval. We identified a wide variation in assessment techniques between our experts. Measurements were perceived as the most accurate method of assessing frontal recession whereas photography was preferred for temporal recession. Inter-rater reliability between clinicians measuring the frontal hairline scenarios indicated a moderate strength of agreement (ICC 0.613; 95% CI: 0.398 to 0.848), yet intra-rater reliability was found to be poor with wide limits of agreement (-8.71mm to 9.92mm) on follow-up. Importantly, when clear guidance was provided on how the hairline should be identified (questionnaire 3), inter-rater reliability improved significantly, with an ICC 0.702 suggesting moderate agreement (95% CI: 0.508 to 0.890; p<0.001). A similar pattern was seen with temporal hairline measurements, which again improved in accuracy with instruction. CONCLUSION We show that accuracy of measurements in FFA can be improved with simple instruction and validate components of the IFFACG measurement recommendations.
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Affiliation(s)
- D M Cummins
- The Dermatology Centre, Salford Royal Hospital, Northern Care Alliance NHS Foundation Trust, Manchester, UK
| | - C Marshall
- The Dermatology Centre, Salford Royal Hospital, Northern Care Alliance NHS Foundation Trust, Manchester, UK
| | - L Asfour
- Sinclair Dermatology, Melbourne, Australia
| | - A Bryden
- Department of Dermatology, Ninewells Hospital, Dundee, DD1 9SY, UK
| | - C Champagne
- Department of Dermatology, Watford General Hospital, West Hertfordshire Hospitals, Vicarage Rd, Watford, WD18 0HB, UK
| | - Y Z Chiang
- The Dermatology Centre, Salford Royal Hospital, Northern Care Alliance NHS Foundation Trust, Manchester, UK
| | - D Fairhurst
- Department of Dermatology, Pontefract General Infirmary, Friarwood Lane, Pontefract, West Yorkshire, WF8 1PL, UK
| | - P Farrant
- Department of Dermatology, Brighton and Sussex University Hospitals NHS Trust, Brighton, BN2 3EW, UK
| | - C Heal
- Centre for Biostatistics, University of Manchester, Manchester, UK
| | - S Holmes
- Alan Lyell Centre for Dermatology, Queen Elizabeth University Hospital, Glasgow, G51 4TF, UK
| | - V Joliffe
- Department of Dermatology, Royal London Hospital, Barts Health NHS Trust, London, E1 1BB, UK
| | - J Jones
- Department of Dermatology, Royal Free Hospital, London, NW3 2QG, UK and The Hospital of St. John and St. Elizabeth, St. John's Wood, London, NW8 9NH, UK
| | - M R Kaur
- Department of Dermatology, University Hospitals Birmingham NHS Foundation Trust, Solihull, B91 2JL, UK
| | - N Meah
- Department of Dermatology, St Helens and Knowsley Teaching Hospitals NHS Trust, St Helens, UK
| | - A Messenger
- Department of Dermatology, Royal Hallamshire Hospital, Sheffield, S10 2JF, UK
| | - M Mowbray
- Department of Dermatology, Queen Margaret Hospital, Dunfermline, KY12 0SU, UK
| | - A Takwale
- Department of Dermatology, Gloucestershire Hospitals NHS Foundation Trust, Gloucester, GL1 3NN, UK
| | - C Tziotzios
- St John's Institute of Dermatology, Guy's and St Thomas' Hospitals NHS Foundation Trust & King's College London, SE1 9RT, UK
| | - M Wade
- The London Skin and Hair Clinic, London, WC1V 7DN, UK
| | - S Wong
- HCA, The Shard, St. Thomas Street, London, SE1 9BS
| | - S Zaheri
- Department of Dermatology, Imperial College NHS Healthcare Trust, London, UK
| | - M Harries
- The Dermatology Centre, Salford Royal Hospital, Northern Care Alliance NHS Foundation Trust, Manchester, UK.,Centre for Dermatology Research, University of Manchester, MAHSC and NIHR Manchester Biomedical Research Centre, Manchester, UK
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Dognin N, Salaun E, Champagne C, O'Hara G, Paradis J, Faroux L, Philippon F, Beaudoin J, O'Connor K, Bernier M, Rodès-Cabau J, Champagne J. PERCUTANEOUS LEFT ATRIAL APPENDAGE CLOSURE IN PATIENTS WITH HEMOSTASIS DISORDERS AND ANTICOAGULANT CONTRAINDICATION. Can J Cardiol 2021. [DOI: 10.1016/j.cjca.2021.07.100] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
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Abstract
BACKGROUND In Ireland and across the European Union the COVID-19 epidemic waves, driven mainly by the emergence of new variants of the SARS-CoV-2 have continued their course, despite various interventions from governments. Public health interventions continue in their attempts to control the spread as they wait for the planned significant effect of vaccination. METHODS To tackle this challenge and the observed non-stationary aspect of the epidemic we used a modified SEIR stochastic model with time-varying parameters, following Brownian process. This enabled us to reconstruct the temporal evolution of the transmission rate of COVID-19 with the non-specific hypothesis that it follows a basic stochastic process constrained by the available data. This model is coupled with Bayesian inference (particle Markov Chain Monte Carlo method) for parameter estimation and utilized mainly well-documented Irish hospital data. RESULTS In Ireland, mitigation measures provided a 78-86% reduction in transmission during the first wave between March and May 2020. For the second wave in October 2020, our reduction estimation was around 20% while it was 70% for the third wave in January 2021. This third wave was partly due to the UK variant appearing in Ireland. In June 2020 we estimated that sero-prevalence was 2.0% (95% CI: 1.2-3.5%) in complete accordance with a sero-prevalence survey. By the end of April 2021, the sero-prevalence was greater than 17% due in part to the vaccination campaign. Finally we demonstrate that the available observed confirmed cases are not reliable for analysis owing to the fact that their reporting rate has as expected greatly evolved. CONCLUSION We provide the first estimations of the dynamics of the COVID-19 epidemic in Ireland and its key parameters. We also quantify the effects of mitigation measures on the virus transmission during and after mitigation for the three waves. Our results demonstrate that Ireland has significantly reduced transmission by employing mitigation measures, physical distancing and lockdown. This has to date avoided the saturation of healthcare infrastructures, flattened the epidemic curve and likely reduced mortality. However, as we await for a full roll out of a vaccination programme and as new variants potentially more transmissible and/or more infectious could continue to emerge and mitigation measures change silent transmission, challenges remain.
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Affiliation(s)
- Bernard Cazelles
- UMMISCO, Sorbonne Université, Paris, France.
- INRAE, Université Paris-Saclay, MaIAGE, Jouy-en-Josas, France.
- Eco-Evolution Mathématique, IBENS, UMR 8197, CNRS, Ecole Normale Supérieure, Paris, France.
| | | | - Clara Champagne
- Swiss Tropical and Public Health Institute, Basel, Switzerland
- Universty of Basel, Basel, Switzerland
| | - Catherine Comiskey
- School of Nursing and Midwifery, Trinity College Dublin, The University of Dublin, Dublin, Ireland
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Cazelles B, Champagne C, Nguyen-Van-Yen B, Comiskey C, Vergu E, Roche B. A mechanistic and data-driven reconstruction of the time-varying reproduction number: Application to the COVID-19 epidemic. PLoS Comput Biol 2021; 17:e1009211. [PMID: 34310593 PMCID: PMC8341713 DOI: 10.1371/journal.pcbi.1009211] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2021] [Revised: 08/05/2021] [Accepted: 06/23/2021] [Indexed: 12/20/2022] Open
Abstract
The effective reproduction number Reff is a critical epidemiological parameter that characterizes the transmissibility of a pathogen. However, this parameter is difficult to estimate in the presence of silent transmission and/or significant temporal variation in case reporting. This variation can occur due to the lack of timely or appropriate testing, public health interventions and/or changes in human behavior during an epidemic. This is exactly the situation we are confronted with during this COVID-19 pandemic. In this work, we propose to estimate Reff for the SARS-CoV-2 (the etiological agent of the COVID-19), based on a model of its propagation considering a time-varying transmission rate. This rate is modeled by a Brownian diffusion process embedded in a stochastic model. The model is then fitted by Bayesian inference (particle Markov Chain Monte Carlo method) using multiple well-documented hospital datasets from several regions in France and in Ireland. This mechanistic modeling framework enables us to reconstruct the temporal evolution of the transmission rate of the COVID-19 based only on the available data. Except for the specific model structure, it is non-specifically assumed that the transmission rate follows a basic stochastic process constrained by the observations. This approach allows us to follow both the course of the COVID-19 epidemic and the temporal evolution of its Reff(t). Besides, it allows to assess and to interpret the evolution of transmission with respect to the mitigation strategies implemented to control the epidemic waves in France and in Ireland. We can thus estimate a reduction of more than 80% for the first wave in all the studied regions but a smaller reduction for the second wave when the epidemic was less active, around 45% in France but just 20% in Ireland. For the third wave in Ireland the reduction was again significant (>70%).
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Affiliation(s)
- Bernard Cazelles
- Sorbonne Université, UMMISCO, Paris, France
- INRAE, Université Paris-Saclay, MaIAGE, Jouy-en-Josas, France
- Eco-Evolution Mathématique, IBENS, UMR 8197, CNRS, Ecole Normale Supérieure, Paris, France
| | - Clara Champagne
- Swiss Tropical and Public Health Institute, Basel, Switzerland
- Universty of Basel, Basel, Switzerland
| | - Benjamin Nguyen-Van-Yen
- Eco-Evolution Mathématique, IBENS, UMR 8197, CNRS, Ecole Normale Supérieure, Paris, France
- Institut Pasteur, Unité de Génétique Fonctionnelle des Maladies Infectieuses, Paris, France
| | - Catherine Comiskey
- School of Nursing and Midwifery, Trinity College Dublin, The University of Dublin, Dublin, Ireland
| | - Elisabeta Vergu
- INRAE, Université Paris-Saclay, MaIAGE, Jouy-en-Josas, France
| | - Benjamin Roche
- MIVEGEC, IRD, CNRS and Université de Montpellier, Montpellier, France
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Cazelles B, Comiskey C, Nguyen-Van-Yen B, Champagne C, Roche B. Parallel trends in the transmission of SARS-CoV-2 and retail/recreation and public transport mobility during non-lockdown periods. Int J Infect Dis 2021; 104:693-695. [PMID: 33540130 PMCID: PMC7849485 DOI: 10.1016/j.ijid.2021.01.067] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Revised: 01/25/2021] [Accepted: 01/26/2021] [Indexed: 11/16/2022] Open
Abstract
Recent literature strongly supports the hypothesis that mobility restriction and social distancing play a crucial role in limiting the transmission of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). During the first wave of the coronavirus disease 2019 (COVID-19) pandemic, it was shown that mobility restriction reduced transmission significantly. This study found that, in the period between the first two waves of the COVID-19 pandemic, there was high positive correlation between trends in the transmission of SARS-CoV-2 and mobility. These two trends oscillated simultaneously, and increased mobility following the relaxation of lockdown rules was significantly associated with increased transmission. From a public health perspective, these results highlight the importance of tracking changes in mobility when relaxing mitigation measures in order to anticipate future changes in the spread of SARS-CoV-2.
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Affiliation(s)
- Bernard Cazelles
- UMMISCO, Sorbonne Université, Paris, France; Eco-Evolution Mathématique, IBENS, UMR 8197, CNRS, Ecole Normale Supérieure, Paris, France.
| | - Catherine Comiskey
- School of Nursing and Midwifery, Trinity College Dublin, University of Dublin, Dublin, Ireland
| | - Benjamin Nguyen-Van-Yen
- Eco-Evolution Mathématique, IBENS, UMR 8197, CNRS, Ecole Normale Supérieure, Paris, France; Institut Pasteur, Unité de Génétique Fonctionnelle des Maladies Infectieuses, Paris, France
| | - Clara Champagne
- Swiss Tropical and Public Health Institute, Basel, Switzerland; University of Basel, Basel, Switzerland
| | - Benjamin Roche
- MIVEGEC, IRD, CNRS and Université de Montpellier, Montpellier, France
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Denz A, Njoroge MM, Tambwe MM, Champagne C, Okumu F, van Loon JJA, Hiscox A, Saddler A, Fillinger U, Moore SJ, Chitnis N. Predicting the impact of outdoor vector control interventions on malaria transmission intensity from semi-field studies. Parasit Vectors 2021; 14:64. [PMID: 33472661 PMCID: PMC7819244 DOI: 10.1186/s13071-020-04560-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2020] [Accepted: 12/21/2020] [Indexed: 01/08/2023] Open
Abstract
BACKGROUND Semi-field experiments with human landing catch (HLC) measure as the outcome are an important step in the development of novel vector control interventions against outdoor transmission of malaria since they provide good estimates of personal protection. However, it is often infeasible to determine whether the reduction in HLC counts is due to mosquito mortality or repellency, especially considering that spatial repellents based on volatile pyrethroids might induce both. Due to the vastly different impact of repellency and mortality on transmission, the community-level impact of spatial repellents can not be estimated from such semi-field experiments. METHODS We present a new stochastic model that is able to estimate for any product inhibiting outdoor biting, its repelling effect versus its killing and disarming (preventing host-seeking until the next night) effects, based only on time-stratified HLC data from controlled semi-field experiments. For parameter inference, a Bayesian hierarchical model is used to account for nightly variation of semi-field experimental conditions. We estimate the impact of the products on the vectorial capacity of the given Anopheles species using an existing mathematical model. With this methodology, we analysed data from recent semi-field studies in Kenya and Tanzania on the impact of transfluthrin-treated eave ribbons, the odour-baited Suna trap and their combination (push-pull system) on HLC of Anopheles arabiensis in the peridomestic area. RESULTS Complementing previous analyses of personal protection, we found that the transfluthrin-treated eave ribbons act mainly by killing or disarming mosquitoes. Depending on the actual ratio of disarming versus killing, the vectorial capacity of An. arabiensis is reduced by 41 to 96% at 70% coverage with the transfluthrin-treated eave ribbons and by 38 to 82% at the same coverage with the push-pull system, under the assumption of a similar impact on biting indoors compared to outdoors. CONCLUSIONS The results of this analysis of semi-field data suggest that transfluthrin-treated eave ribbons are a promising tool against malaria transmission by An. arabiensis in the peridomestic area, since they provide both personal and community protection. Our modelling framework can estimate the community-level impact of any tool intervening during the mosquito host-seeking state using data from only semi-field experiments with time-stratified HLC.
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Affiliation(s)
- Adrian Denz
- Department of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, Socinstrasse 57, 4051, Basel, Switzerland.
- University of Basel, Petersplatz 1, Basel, Switzerland.
| | - Margaret M Njoroge
- Human Health Theme, International Centre of Insect Physiology and Ecology (icipe), 00100, Nairobi, Kenya
- Laboratory of Entomology, Wageningen University and Research, P.O. Box 16, 6700 AA, Wageningen, The Netherlands
| | - Mgeni M Tambwe
- Environmental Health and Ecological Sciences Department, Ifakara Health Institute, P.O. Box 53, Ifakara, Tanzania
| | - Clara Champagne
- Department of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, Socinstrasse 57, 4051, Basel, Switzerland
- University of Basel, Petersplatz 1, Basel, Switzerland
| | - Fredros Okumu
- Environmental Health and Ecological Sciences Department, Ifakara Health Institute, P.O. Box 53, Ifakara, Tanzania
- School of Public Health, Faculty of Health Science, University of the Witwatersrand, Johannesburg, South Africa
- School of Life Science and Biotechnology, Nelson Mandela African Institution of Science and Technology, P.O. Box 447, Arusha, Tanzania
- Institute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, UK
| | - Joop J A van Loon
- Laboratory of Entomology, Wageningen University and Research, P.O. Box 16, 6700 AA, Wageningen, The Netherlands
| | - Alexandra Hiscox
- Laboratory of Entomology, Wageningen University and Research, P.O. Box 16, 6700 AA, Wageningen, The Netherlands
- ARCTEC, London School of Hygiene and Tropical Medicine, Keppel Street, WC1E 7HT, London, UK
| | - Adam Saddler
- Department of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, Socinstrasse 57, 4051, Basel, Switzerland
- University of Basel, Petersplatz 1, Basel, Switzerland
- Environmental Health and Ecological Sciences Department, Ifakara Health Institute, P.O. Box 53, Ifakara, Tanzania
| | - Ulrike Fillinger
- Human Health Theme, International Centre of Insect Physiology and Ecology (icipe), 00100, Nairobi, Kenya
| | - Sarah J Moore
- Department of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, Socinstrasse 57, 4051, Basel, Switzerland
- University of Basel, Petersplatz 1, Basel, Switzerland
- Environmental Health and Ecological Sciences Department, Ifakara Health Institute, P.O. Box 53, Ifakara, Tanzania
| | - Nakul Chitnis
- Department of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, Socinstrasse 57, 4051, Basel, Switzerland
- University of Basel, Petersplatz 1, Basel, Switzerland
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McSweeney SM, Christou EAA, Dand N, Boalch A, Holmes S, Harries M, Palamaras I, Cunningham F, Parkins G, Kaur M, Farrant P, McDonagh A, Messenger A, Jones J, Jolliffe V, Ali I, Ardern-Jones M, Mitchell C, Burrows N, Atkar R, Banfield C, Alexandroff A, Champagne C, Cooper HL, Patel GK, Macbeth A, Page M, Bryden A, Mowbray M, Wahie S, Armstrong K, Cooke N, Goodfield M, Man I, de Berker D, Dunnil G, Takwale A, Rao A, Siah TW, Sinclair R, Wade MS, Bhargava K, Fenton DA, McGrath JA, Tziotzios C. Frontal fibrosing alopecia: a descriptive cross-sectional study of 711 cases in female patients from the UK. Br J Dermatol 2020; 183:1136-1138. [PMID: 32652611 DOI: 10.1111/bjd.19399] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- S M McSweeney
- St John's Institute of Dermatology, Guy's Hospital, London, SE1 9RT, UK
| | - E A A Christou
- St John's Institute of Dermatology, Guy's Hospital, London, SE1 9RT, UK
| | - N Dand
- Department of Medical and Molecular Genetics, King's College London, Guy's Hospital, London, SE1 9RT, UK
| | - A Boalch
- Greenwich and Lewisham NHS Foundation Trust, London, SE13 6LH, UK
| | - S Holmes
- Alan Lyell Centre for Dermatology, Queen Elizabeth University Hospital, Glasgow, G51 4TF, UK.,UK FFA Consortium
| | | | | | - F Cunningham
- Alan Lyell Centre for Dermatology, Queen Elizabeth University Hospital, Glasgow, G51 4TF, UK.,UK FFA Consortium
| | - G Parkins
- Alan Lyell Centre for Dermatology, Queen Elizabeth University Hospital, Glasgow, G51 4TF, UK.,UK FFA Consortium
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - K Bhargava
- St John's Institute of Dermatology, Guy's Hospital, London, SE1 9RT, UK.,UK FFA Consortium
| | - D A Fenton
- St John's Institute of Dermatology, Guy's Hospital, London, SE1 9RT, UK.,UK FFA Consortium
| | - J A McGrath
- St John's Institute of Dermatology, Guy's Hospital, London, SE1 9RT, UK
| | - C Tziotzios
- St John's Institute of Dermatology, Guy's Hospital, London, SE1 9RT, UK
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13
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Bukhari A, Cole R, Champagne C, McGraw S, Moylan E, Armstrong N. Nutrition Interventions in Military Dining Facilities Can Enhance Diet Quality and Meal Satisfaction. J Acad Nutr Diet 2020. [DOI: 10.1016/j.jand.2020.06.086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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14
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Lamontagne ME, Djossa Adoun MAS, Blanchette AK, Champagne C, Johnson MP, Vincent C, Routhier F. Facilitators and barriers to the use of service dogs: an exploratory study using the Theoretical Domains Framework. Disabil Rehabil Assist Technol 2019; 15:537-544. [DOI: 10.1080/17483107.2019.1594406] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Affiliation(s)
- M-E Lamontagne
- Department of Rehabilitation, Université Laval, Quebec, Canada
- Center for Interdisciplinary Research in Rehabilitation and Social Integration, Centre intégré universitaire de santé et de services sociaux de la Capitale-Nationale, Quebec, Canada
| | - MAS Djossa Adoun
- Department of Rehabilitation, Université Laval, Quebec, Canada
- Center for Interdisciplinary Research in Rehabilitation and Social Integration, Centre intégré universitaire de santé et de services sociaux de la Capitale-Nationale, Quebec, Canada
| | - AK Blanchette
- Department of Rehabilitation, Université Laval, Quebec, Canada
- Center for Interdisciplinary Research in Rehabilitation and Social Integration, Centre intégré universitaire de santé et de services sociaux de la Capitale-Nationale, Quebec, Canada
| | - C Champagne
- Center for Interdisciplinary Research in Rehabilitation and Social Integration, Centre intégré universitaire de santé et de services sociaux de la Capitale-Nationale, Quebec, Canada
| | - M-P Johnson
- Wheelchair and Seating Department, Centre intégré universitaire de santé et de services sociaux de la Capitale-Nationale, Quebec, Canada
| | - C Vincent
- Department of Rehabilitation, Université Laval, Quebec, Canada
- Center for Interdisciplinary Research in Rehabilitation and Social Integration, Centre intégré universitaire de santé et de services sociaux de la Capitale-Nationale, Quebec, Canada
| | - F Routhier
- Department of Rehabilitation, Université Laval, Quebec, Canada
- Center for Interdisciplinary Research in Rehabilitation and Social Integration, Centre intégré universitaire de santé et de services sociaux de la Capitale-Nationale, Quebec, Canada
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15
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Du S, Liu Y, Liu J, Zhao J, Champagne C, Tong L, Zhang R, Zhang F, Qin CF, Ma P, Chen CH, Liang G, Liu Q, Shi PY, Cazelles B, Wang P, Tian H, Cheng G. Aedes mosquitoes acquire and transmit Zika virus by breeding in contaminated aquatic environments. Nat Commun 2019; 10:1324. [PMID: 30902991 PMCID: PMC6430813 DOI: 10.1038/s41467-019-09256-0] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2018] [Accepted: 03/01/2019] [Indexed: 01/26/2023] Open
Abstract
Zika virus (ZIKV) is a mosquito-borne flavivirus that predominantly circulates between humans and Aedes mosquitoes. Clinical studies have shown that Zika viruria in patients persists for an extended period, and results in infectious virions being excreted. Here, we demonstrate that Aedes mosquitoes are permissive to ZIKV infection when breeding in urine or sewage containing low concentrations of ZIKV. Mosquito larvae and pupae, including from field Aedes aegypti can acquire ZIKV from contaminated aquatic systems, resulting in ZIKV infection of adult females. Adult mosquitoes can transmit infectious virions to susceptible type I/II interferon receptor-deficient (ifnagr-/-) C57BL/6 (AG6) mice. Furthermore, ZIKV viruria from infected AG6 mice can causes mosquito infection during the aquatic life stages. Our studies suggest that infectious urine could be a natural ZIKV source, which is potentially transmissible to mosquitoes when breeding in an aquatic environment.
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Affiliation(s)
- Senyan Du
- Tsinghua-Peking Joint Center for Life Sciences, School of Medicine, Tsinghua University, 100084, Beijing, People's Republic of China
- Beijing Advanced Innovation Center for Structural Biology, School of Medicine, Tsinghua University, 100084, Beijing, People's Republic of China
- Institute of Pathogenic Organisms, Shenzhen Center for Disease Control and Prevention, 518055, Shenzhen, Guangdong, People's Republic of China
| | - Yang Liu
- Tsinghua-Peking Joint Center for Life Sciences, School of Medicine, Tsinghua University, 100084, Beijing, People's Republic of China
- School of Life Science, Tsinghua University, 100084, Beijing, People's Republic of China
| | - Jianying Liu
- Tsinghua-Peking Joint Center for Life Sciences, School of Medicine, Tsinghua University, 100084, Beijing, People's Republic of China
| | - Jie Zhao
- Tsinghua-Peking Joint Center for Life Sciences, School of Medicine, Tsinghua University, 100084, Beijing, People's Republic of China
| | - Clara Champagne
- IBENS, UMR 8197 CNRS-ENS Ecole Normale Supérieure, 75005, Paris, France
| | - Liangqin Tong
- Tsinghua-Peking Joint Center for Life Sciences, School of Medicine, Tsinghua University, 100084, Beijing, People's Republic of China
| | - Renli Zhang
- Institute of Pathogenic Organisms, Shenzhen Center for Disease Control and Prevention, 518055, Shenzhen, Guangdong, People's Republic of China
| | - Fuchun Zhang
- Institute of infectious diseases, Guangzhou Eighth People's Hospital, Guangzhou Medical University, 510060, Guangzhou, People's Republic of China
| | - Cheng-Feng Qin
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, 100071, Beijing, People's Republic of China
| | - Ping Ma
- Department of Clinical Laboratory, Tsinghua University Hospital, 100084, Beijing, People's Republic of China
| | - Chun-Hong Chen
- National Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Zhunan, Miaoli, 35053, Taiwan, Republic of China
| | - Guodong Liang
- State Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Viral Disease Control and Prevention, China CDC, 102206, Beijing, People's Republic of China
| | - Qiyong Liu
- State Key Laboratory of Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, China CDC, 102206, Beijing, People's Republic of China
| | - Pei-Yong Shi
- Department of Biochemistry and Molecular Biology, Department of Pharmacology and Toxicology, and Sealy Center for Structural Biology and Molecular Biophysics, University of Texas Medical Branch, Galveston, TX, 77555, USA
| | - Bernard Cazelles
- IBENS, UMR 8197 CNRS-ENS Ecole Normale Supérieure, 75005, Paris, France
- International Center for Mathematical and Computational Modeling of Complex Systems (UMMISCO), IRD-Sorbone Université, Bondy, 93143, France
| | - Penghua Wang
- Department of Immunology, School of Medicine, the University of Connecticut Health Center, Farmington, CT, 06030, USA
| | - Huaiyu Tian
- State Key Laboratory of Remote Sensing Science, College of Global Change and Earth System Science, Beijing Normal University, 100875, Beijing, People's Republic of China.
| | - Gong Cheng
- Tsinghua-Peking Joint Center for Life Sciences, School of Medicine, Tsinghua University, 100084, Beijing, People's Republic of China.
- Beijing Advanced Innovation Center for Structural Biology, School of Medicine, Tsinghua University, 100084, Beijing, People's Republic of China.
- Institute of Pathogenic Organisms, Shenzhen Center for Disease Control and Prevention, 518055, Shenzhen, Guangdong, People's Republic of China.
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16
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Champagne C, Paul R, Ly S, Duong V, Leang R, Cazelles B. Dengue modeling in rural Cambodia: Statistical performance versus epidemiological relevance. Epidemics 2019; 26:43-57. [DOI: 10.1016/j.epidem.2018.08.004] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2017] [Revised: 07/19/2018] [Accepted: 08/27/2018] [Indexed: 02/07/2023] Open
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17
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Champagne C, Cazelles B. Comparison of stochastic and deterministic frameworks in dengue modelling. Math Biosci 2019; 310:1-12. [PMID: 30735695 DOI: 10.1016/j.mbs.2019.01.010] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2018] [Revised: 01/28/2019] [Accepted: 01/30/2019] [Indexed: 11/16/2022]
Abstract
We perform estimations of compartment models for dengue transmission in rural Cambodia with increasing complexity regarding both model structure and the account for stochasticity. On the one hand, we successively account for three embedded sources of stochasticity: observation noise, demographic variability and environmental hazard. On the other hand, complexity in the model structure is increased by introducing vector-borne transmission, explicit asymptomatic infections and interacting virus serotypes. Using two sources of case data from dengue epidemics in Kampong Cham (Cambodia), models are estimated in the bayesian framework, with Markov Chain Monte Carlo and Particle Markov Chain Monte Carlo. We highlight the advantages and drawbacks of the different formulations in a practical setting. Although in this case the deterministic models provide a good approximation of the mean trajectory for a low computational cost, the stochastic frameworks better reflect and account for parameter and simulation uncertainty.
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Affiliation(s)
- Clara Champagne
- Institut de Biologie de l'Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS UMR 8197,46 rue d'Ulm, Paris 75005, France; CREST, ENSAE, Université Paris Saclay, 5, avenue Henry Le Chatelier, Palaiseau cedex 91764, France.
| | - Bernard Cazelles
- Institut de Biologie de l'Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS UMR 8197,46 rue d'Ulm, Paris 75005, France; International Center for Mathematical and Computational Modeling of Complex Systems (UMMISCO), UMI 209 Sorbonne Université - IRD, Bondy cedex, France
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18
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Carmichael C, Miketinas D, Allen H, Champagne C. Behind the Serving Line: What Do We Know About the Health of Those Who Feed Our School Children? J Acad Nutr Diet 2018. [DOI: 10.1016/j.jand.2018.08.085] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Cazelles B, Champagne C, Dureau J. Accounting for non-stationarity in epidemiology by embedding time-varying parameters in stochastic models. PLoS Comput Biol 2018; 14:e1006211. [PMID: 30110322 PMCID: PMC6110518 DOI: 10.1371/journal.pcbi.1006211] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2017] [Revised: 08/27/2018] [Accepted: 05/18/2018] [Indexed: 11/19/2022] Open
Abstract
The spread of disease through human populations is complex. The characteristics of disease propagation evolve with time, as a result of a multitude of environmental and anthropic factors, this non-stationarity is a key factor in this huge complexity. In the absence of appropriate external data sources, to correctly describe the disease propagation, we explore a flexible approach, based on stochastic models for the disease dynamics, and on diffusion processes for the parameter dynamics. Using such a diffusion process has the advantage of not requiring a specific mathematical function for the parameter dynamics. Coupled with particle MCMC, this approach allows us to reconstruct the time evolution of some key parameters (average transmission rate for instance). Thus, by capturing the time-varying nature of the different mechanisms involved in disease propagation, the epidemic can be described. Firstly we demonstrate the efficiency of this methodology on a toy model, where the parameters and the observation process are known. Applied then to real datasets, our methodology is able, based solely on simple stochastic models, to reconstruct complex epidemics, such as flu or dengue, over long time periods. Hence we demonstrate that time-varying parameters can improve the accuracy of model performances, and we suggest that our methodology can be used as a first step towards a better understanding of a complex epidemic, in situation where data is limited and/or uncertain.
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Affiliation(s)
- Bernard Cazelles
- Institut de Biologie de l’Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS UMR 8197, Paris, France
- International Center for Mathematical and Computational Modeling of Complex Systems (UMMISCO), UMI 209, UPMC/IRD, France
- Hosts, Vectors and Infectious Agents, CNRS URA 3012, Institut Pasteur, Paris, France
| | - Clara Champagne
- Institut de Biologie de l’Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS UMR 8197, Paris, France
- CREST, ENSAE, Université Paris Saclay, Palaiseau, France
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Vande Woestyne M, Champagne C, Roque A, Mathieu-Régnier É, Servagi Vernat S, Gaillot-Petit N. 33. Dosimetric study of parametral implantation of interstitial needles in uterovaginal pulsed dose rate brachytherapy. Phys Med 2017. [DOI: 10.1016/j.ejmp.2017.10.113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/18/2022] Open
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21
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Bukhari A, Lutz L, Smith T, Hatch A, Hawes M, O'Conner K, Carrigan C, McGraw S, Champagne C, Montain S. A Food-based Intervention in a Military Dining Facility Results in Improvements in Blood Fatty Acid Profile. J Acad Nutr Diet 2017. [DOI: 10.1016/j.jand.2017.08.059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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22
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McLean K, Moore C, Miketinas D, Champagne C. Motivation to Change Dietary Behaviors: Data from Obese Females Seeking Bariatric Surgery. J Acad Nutr Diet 2017. [DOI: 10.1016/j.jand.2017.06.265] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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23
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Debroy Kidambi A, Dobson K, Holmes S, Carauna D, Del Marmol V, Vujovic A, Kaur M, Takwale A, Farrant P, Champagne C, Harries M, Messenger A. Frontal fibrosing alopecia in men: an association with facial moisturizers and sunscreens. Br J Dermatol 2017; 177:260-261. [DOI: 10.1111/bjd.15311] [Citation(s) in RCA: 55] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
| | - K. Dobson
- Royal Hallamshire Hospital; Sheffield U.K
| | - S. Holmes
- Southern General Hospital; Glasgow U.K
| | | | - V. Del Marmol
- Hopital Erasme; Université Libre de Bruxelles; Brussels Belgium
| | - A. Vujovic
- Hopital Erasme; Université Libre de Bruxelles; Brussels Belgium
| | | | - A. Takwale
- Gloucestershire Royal Hospital; Gloucester U.K
| | - P. Farrant
- Brighton and Sussex Hospitals; Brighton U.K
| | | | - M. Harries
- University of Manchester; Salford Royal Foundation Trust; Salford U.K
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Champagne C, Salthouse DG, Paul R, Cao-Lormeau VM, Roche B, Cazelles B. Structure in the variability of the basic reproductive number ( R0) for Zika epidemics in the Pacific islands. eLife 2016; 5. [PMID: 27897973 PMCID: PMC5262383 DOI: 10.7554/elife.19874] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2016] [Accepted: 11/22/2016] [Indexed: 11/20/2022] Open
Abstract
Before the outbreak that reached the Americas in 2015, Zika virus (ZIKV) circulated in Asia and the Pacific: these past epidemics can be highly informative on the key parameters driving virus transmission, such as the basic reproduction number (R0). We compare two compartmental models with different mosquito representations, using surveillance and seroprevalence data for several ZIKV outbreaks in Pacific islands (Yap, Micronesia 2007, Tahiti and Moorea, French Polynesia 2013-2014, New Caledonia 2014). Models are estimated in a stochastic framework with recent Bayesian techniques. R0 for the Pacific ZIKV epidemics is estimated between 1.5 and 4.1, the smallest islands displaying higher and more variable values. This relatively low range of R0 suggests that intervention strategies developed for other flaviviruses should enable as, if not more effective control of ZIKV. Our study also highlights the importance of seroprevalence data for precise quantitative analysis of pathogen propagation, to design prevention and control strategies. DOI:http://dx.doi.org/10.7554/eLife.19874.001 Zika virus is an infectious disease primarily transmitted between people by mosquitoes. While most people develop mild flu-like symptoms, infection during pregnancy can interfere with how the baby’s head and brain develop. Until recently, the virus had only been seen sporadically in Africa and Asia, but since 2007, outbreaks have been recorded on several Pacific islands. In 2015, the Zika virus reached the Americas, and within six months over 1.5 million cases had been reported in Brazil alone. There is an urgent need to understand how the Zika virus moves within a population in order to help policymakers, and public health professionals, plan treatment and control of outbreaks of the disease. Researchers often use predictive models to estimate how a disease will spread. A parameter commonly calculated by these models is the “basic reproductive number”, or R0, which represents the average number of additional cases of the disease caused by one infected individual. Using models that incorporated data from Zika virus outbreaks that occurred on several Pacific islands, Champagne et al. have produced estimates of R0 that range from 1.5-4.1. The R0 values are greater than one, indicating that infection will spread within a population, but in the same range as those obtained for dengue fever, another closely related mosquito-borne disease. This suggests that by taking appropriate measures, the spread of Zika and dengue can be controlled to similar extents. A closer look at the relationship between the population size and the predicted R0 value for each Pacific island revealed an unexpected inverse relationship: the smaller the population, the larger the value of R0. Since other regional factors may also explain these large differences between settings, further work is needed to disentangle context-specific from disease-specific factors. In this respect, data about seroprevalence (the number of people whose blood shows evidence of a past infection) in different populations is crucial for precisely analyzing the spread of Zika virus. DOI:http://dx.doi.org/10.7554/eLife.19874.002
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Affiliation(s)
- Clara Champagne
- IBENS, UMR 8197 CNRS-ENS Ecole Normale Supérieure, Paris, France.,CREST, ENSAE, Université Paris Saclay, , France
| | | | - Richard Paul
- Department of Genomes and Genetics, Institut Pasteur, Unité de Génétique Fonctionnelle des Maladies Infectieuses, Paris, France.,Centre National de la Recherche Scientifique, URA 3012, Paris, France
| | - Van-Mai Cao-Lormeau
- Unit of Emerging Infectious Diseases, Institut Louis Malardé, Tahiti, France
| | - Benjamin Roche
- International Center for Mathematical and Computational Modeling of Complex Systems (UMMISCO), UPMC/IRD, Bondy cedex, France
| | - Bernard Cazelles
- IBENS, UMR 8197 CNRS-ENS Ecole Normale Supérieure, Paris, France.,International Center for Mathematical and Computational Modeling of Complex Systems (UMMISCO), UPMC/IRD, Bondy cedex, France
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McGraw S, Bukhari A, Champagne C, Hatch A, Logan C, Spanbauer S, Montain S, Cole R. Physically Fit Soldiers Eat Healthier and Feel Nutrition Impacts Physical Performance. J Acad Nutr Diet 2016. [DOI: 10.1016/j.jand.2016.06.091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Cole R, Bukhari A, Champagne C, McGraw S, Hatch A, Logan C, Spanbauer S, Montain S. Healthy Eating Index Increased after Tactical Human Optimization, Rapid Rehabilitation and Reconditioning (THOR3) Dining Facility Menu Enhancement in Military Operators. J Acad Nutr Diet 2016. [DOI: 10.1016/j.jand.2016.06.181] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Champagne C. Modélisation des dynamiques épidémiques de la dengue au Cambodge. Rev Epidemiol Sante Publique 2016. [DOI: 10.1016/j.respe.2016.01.089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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Abstract
AIMS The aim of the current study was to report the learning curve for endoscopic septoplasty for a senior surgeon already trained in endonasal sinus surgery. MATERIAL AND METHODS From November 2011 to September 2012, 100 patients were prospectively included and grouped in 5 consecutive groups of 20 by date of surgery. The primary endpoint was operative time. Intra- and postoperative complications and functional assessment were also analyzed. RESULTS Operative time decreased with the surgeon's experience and became stable after 60 procedures. Operative time saving was about 10min per 20 procedures. Mean operative time was stable between groups 4 (21.1±9.6min) and 5 (19.2±8.2min). There was a 2% rate of conversion to conventional surgery for technical problems. The number of procedures free of accidental mucosal lesion increased and became stable after 40 procedures. There was a 4% rate of residual postoperative perforation. Nasal Obstruction and Septoplasty Effectiveness (NOSE) score improved postoperatively in each group (P<0.05). CONCLUSION After 60 endoscopic septoplasty procedures, a senior surgeon masters the surgical technique with satisfactory operative times, and a decreasing rate of intra- and postoperative complications.
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Affiliation(s)
- C Champagne
- Service d'ORL chirurgie cervicofaciale, hôpital d'instruction des armées Percy, 101, avenue Henri-Barbusse, 92141 Clamart, France
| | - S Ballivet de Régloix
- Service d'ORL chirurgie cervicofaciale, hôpital d'instruction des armées Percy, 101, avenue Henri-Barbusse, 92141 Clamart, France
| | - L Genestier
- Service d'ORL chirurgie cervicofaciale, hôpital d'instruction des armées Percy, 101, avenue Henri-Barbusse, 92141 Clamart, France
| | - A Crambert
- Service d'ORL chirurgie cervicofaciale, hôpital d'instruction des armées Percy, 101, avenue Henri-Barbusse, 92141 Clamart, France
| | - O Maurin
- Service d'ORL chirurgie cervicofaciale, hôpital d'instruction des armées Percy, 101, avenue Henri-Barbusse, 92141 Clamart, France
| | - Y Pons
- Service d'ORL chirurgie cervicofaciale, hôpital d'instruction des armées Percy, 101, avenue Henri-Barbusse, 92141 Clamart, France.
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Champagne C, Ballivet de Régloix S, Genestier L, Crambert A, Maurin O, Pons Y. Endoscopic vs. conventional septoplasty: A review of the literature. Eur Ann Otorhinolaryngol Head Neck Dis 2015; 133:43-6. [PMID: 26679230 DOI: 10.1016/j.anorl.2015.11.004] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The aim of this review of literature was to compare conventional and endoscopic septoplasty in terms of operating time, functional efficacy and perioperative morbidity. A systematic review of the scientific literature was performed on the PubMed database, Google and Google Scholar, searching for randomized prospective trials comparing endoscopic and conventional septoplasty. The primary endpoint was operating time, and the secondary endpoints were intra- and postoperative complications, postoperative pain, hospital stay and functional result. Twenty-nine articles published between 1991 and 2012 compared conventional and endoscopic septoplasty, five of which were prospective randomized trials. Operating time was shorter with endoscopic surgery (P<0.001), with less mucosal damage (P<0.01); there was less synechia (P<0.01) and residual deformity (P<0.05); and postoperative pain was milder. Endoscopic septoplasty thus shortened surgery time and reduced perioperative complications, but the functional result was the same as with conventional septoplasty.
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Affiliation(s)
- C Champagne
- Service d'ORL et chirurgie cervicofaciale, hôpital d'instruction des armées Percy, 101, avenue Henri-Barbusse, 92140 Clamart, France
| | - S Ballivet de Régloix
- Service d'ORL et chirurgie cervicofaciale, hôpital d'instruction des armées Percy, 101, avenue Henri-Barbusse, 92140 Clamart, France
| | - L Genestier
- Service d'ORL et chirurgie cervicofaciale, hôpital d'instruction des armées Percy, 101, avenue Henri-Barbusse, 92140 Clamart, France
| | - A Crambert
- Service d'ORL et chirurgie cervicofaciale, hôpital d'instruction des armées Percy, 101, avenue Henri-Barbusse, 92140 Clamart, France
| | - O Maurin
- Service d'ORL et chirurgie cervicofaciale, hôpital d'instruction des armées Percy, 101, avenue Henri-Barbusse, 92140 Clamart, France
| | - Y Pons
- Service d'ORL et chirurgie cervicofaciale, hôpital d'instruction des armées Percy, 101, avenue Henri-Barbusse, 92140 Clamart, France.
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Abstract
This article is designed to provide a step-by-step description of our endoscopic septoplasty technique and discuss its difficulties and technical tips. Endoscopic septoplasty comprises 10 steps: diagnostic endoscopy, subperichondral infiltration, left mucosal incision, dissection of the left subperichondral flap, cartilage incision (0.5 centimetre posterior to the mucosal incision), dissection of the right subperichondral flap, anterior cartilage resection, perpendicular plate dissection, dissection and resection of the maxillary crest, endoscopic revision, mucosal suture and Silastic stents. A satisfactory postoperative result was observed at 3 months in 97% of cases in this series. The main contraindication to endoscopic septoplasty is anterior columellar deviation of the nasal septum requiring a conventional procedure.
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Affiliation(s)
- Y Pons
- Service d'ORL chirurgie cervicofaciale, hôpital d'instruction des Armées Percy, 101, avenue Henri-Barbusse, 92140 Clamart, France.
| | - C Champagne
- Service d'ORL chirurgie cervicofaciale, hôpital d'instruction des Armées Percy, 101, avenue Henri-Barbusse, 92140 Clamart, France
| | - L Genestier
- Service d'ORL chirurgie cervicofaciale, hôpital d'instruction des Armées Percy, 101, avenue Henri-Barbusse, 92140 Clamart, France
| | - S Ballivet de Régloix
- Service d'ORL chirurgie cervicofaciale, hôpital d'instruction des Armées Percy, 101, avenue Henri-Barbusse, 92140 Clamart, France
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Champagne C, Taylor M, Farrant P. Permanent chemotherapy-induced nonscarring alopecia and premature ovarian failure. Clin Exp Dermatol 2015; 40:589-90. [DOI: 10.1111/ced.12596] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/10/2014] [Indexed: 11/30/2022]
Affiliation(s)
- C. Champagne
- Department of Dermatology; Churchill Hospital; Oxford University Hospitals NHS Trust; Oxford UK
| | - M. Taylor
- Department of Cellular Pathology; Brighton and Sussex University Hospitals; Brighton UK
| | - P. Farrant
- Department of Dermatology; Brighton and Sussex University Hospitals; Brighton UK
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Champagne C, Pailhé A, Solaz A. Le temps domestique et parental des hommes et des femmes : quels facteurs d'évolutions en 25 ans ? ACTA ACUST UNITED AC 2015. [DOI: 10.3406/estat.2015.10563] [Citation(s) in RCA: 65] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Lamberth F, Guilbert P, Gaillot-Petit N, Champagne C, Looten-Vieren L, Nguyen TD. [Potential indications for helical tomotherapy in breast cancers]. Cancer Radiother 2013; 18:7-14. [PMID: 24314856 DOI: 10.1016/j.canrad.2013.07.148] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2013] [Revised: 07/17/2013] [Accepted: 07/23/2013] [Indexed: 12/21/2022]
Abstract
PURPOSE To evaluate the dosimetric gain obtained in either the planning target volume or organs at risk coverage by the use of intensity-modulated radiation therapy in some particular postoperative breast cancers. PATIENTS AND METHOD Prospective dosimetric comparison between monoisocentric conformal radiotherapy and intensity-modulated radiation therapy in nine patient files. RESULTS Using intensity-modulated radiation therapy was shown to improve in each case, at least one conformity, homogeneity, and coverage index either for planning target volumes or for organs at risk. Intensity-modulated radiation therapy was therefore always chosen rather than conformal monoisocentric radiotherapy. CONCLUSIONS Indications to retain intensity-modulated radiation therapy would consist of bilateral lesions, pectus excavatum, past thoracic irradiation (Hodgkin's disease) and complex volumes in obese or overweight patients.
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Affiliation(s)
- F Lamberth
- Département de radiothérapie, institut Jean-Godinot, rue du Général-Koenig, 51100 Reims, France
| | - P Guilbert
- Département de radiothérapie, institut Jean-Godinot, rue du Général-Koenig, 51100 Reims, France
| | - N Gaillot-Petit
- Unité de radiophysique médicale, institut Jean-Godinot, rue du Général-Koenig, 51100 Reims, France
| | - C Champagne
- Unité de radiophysique médicale, institut Jean-Godinot, rue du Général-Koenig, 51100 Reims, France
| | - L Looten-Vieren
- Unité de radiophysique médicale, institut Jean-Godinot, rue du Général-Koenig, 51100 Reims, France
| | - T D Nguyen
- Département de radiothérapie, institut Jean-Godinot, rue du Général-Koenig, 51100 Reims, France.
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Nguyen T, Régnier E, Guilbert P, Champagne C, Gaillot Petit N. Tomothérapie hélicoïdale hypofractionnée et localisée de métastases cérébrales : expérience de l’institut Jean-Godinot. Cancer Radiother 2013. [DOI: 10.1016/j.canrad.2013.07.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Abstract
The digital photography of foods method accurately estimates the food intake of adults and children in cafeterias. When using this method, images of food selection and leftovers are quickly captured in the cafeteria. These images are later compared with images of 'standard' portions of food using computer software. The amount of food selected and discarded is estimated based upon this comparison, and the application automatically calculates energy and nutrient intake. In the present review, we describe this method, as well as a related method called the Remote Food Photography Method (RFPM), which relies on smartphones to estimate food intake in near real-time in free-living conditions. When using the RFPM, participants capture images of food selection and leftovers using a smartphone and these images are wirelessly transmitted in near real-time to a server for analysis. Because data are transferred and analysed in near real-time, the RFPM provides a platform for participants to quickly receive feedback about their food intake behaviour and to receive dietary recommendations for achieving weight loss and health promotion goals. The reliability and validity of measuring food intake with the RFPM in adults and children is also reviewed. In sum, the body of research reviewed demonstrates that digital imaging accurately estimates food intake in many environments and it has many advantages over other methods, including reduced participant burden, elimination of the need for participants to estimate portion size, and the incorporation of computer automation to improve the accuracy, efficiency and cost-effectiveness of the method.
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Affiliation(s)
- C K Martin
- Pennington Biomedical Research Center, Baton Rouge, LA, USA
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Pons Y, Ukkola-Pons E, Ballivet de Régloix S, Champagne C, Raynal M, Lepage P, Kossowski M. La paralysie faciale périphérique. J Fr Ophtalmol 2013; 36:548-53. [DOI: 10.1016/j.jfo.2013.02.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2013] [Revised: 02/03/2013] [Accepted: 02/07/2013] [Indexed: 10/26/2022]
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Affiliation(s)
- C Champagne
- Department of Dermatology, Amersham Hospital, Buckinghamshire NHS Trust, Amersham, Buckinghamshire, UK.
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Calderon Artero P, Champagne C, Garigen S, Mousa S, Block R. Fish oil metabolites: translating promising findings from bench to bedside to reduce cardiovascular disease. J Glycomics Lipidomics 2012; 2:1000106. [PMID: 22708071 PMCID: PMC3372925 DOI: 10.4172/2153-0637.1000104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Cardiovascular disease is an inflammatory process and the leading cause of death in the United States. Novel omega-3 derived potent lipid mediators, termed resolvins and protectins, have been identified as major pathophysiologic players in the resolution phase of the inflammatory response. Potent lipid mediators offer tremendous metabolic and pathophysiologic insights in regard to the risk and treatment of cardiovascular disease. In this review, resolvins and protectins are described and analyzed as accelerators of discovery via their potential role as biomarkers for research and clinical decision making in cardiovascular disease. Specific barriers relating to biomarker validation, laboratory methods, and improvement of risk models are introduced and discussed. Potential therapeutic impacts in cardiovascular disease are also mentioned with special consideration for cost-saving implications with respect to dietary fish oil as an alternative to resolvin and protectin treatment. Given the high tolerability of fish oil supplements and previously described benefits of omega-3 fatty acid intake in cardiovascular disease, we conclude that resolvins and protectins are set to soon take center stage as future biomarkers and well-tolerated therapies for cardiovascular disease.
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Affiliation(s)
- P Calderon Artero
- University of Rochester Medical School and Department of Community and Preventive Medicine, the University of Rochester School of Medicine and Dentistry, Rochester, New York
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Brodeur M, Brunner T, Champagne C, Ettenauer S, Smith MJ, Lapierre A, Ringle R, Ryjkov VL, Bacca S, Delheij P, Drake GWF, Lunney D, Schwenk A, Dilling J. First direct mass measurement of the two-neutron halo nucleus 6He and improved mass for the four-neutron halo 8He. Phys Rev Lett 2012; 108:052504. [PMID: 22400930 DOI: 10.1103/physrevlett.108.052504] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2011] [Revised: 11/04/2011] [Indexed: 05/31/2023]
Abstract
The first direct mass measurement of {6}He has been performed with the TITAN Penning trap mass spectrometer at the ISAC facility. In addition, the mass of {8}He was determined with improved precision over our previous measurement. The obtained masses are m({6}He)=6.018 885 883(57) u and m({8}He)=8.033 934 44(11) u. The {6}He value shows a deviation from the literature of 4σ. With these new mass values and the previously measured atomic isotope shifts we obtain charge radii of 2.060(8) and 1.959(16) fm for {6}He and {8}He, respectively. We present a detailed comparison to nuclear theory for {6}He, including new hyperspherical harmonics results. A correlation plot of the point-proton radius with the two-neutron separation energy demonstrates clearly the importance of three-nucleon forces.
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Affiliation(s)
- M Brodeur
- TRIUMF, 4004 Wesbrook Mall, Vancouver BC, Canada V6T 2A3.
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Champagne C, Yoshinari N, Oetjen JA, Riché EL, Beck JD, Offenbacher S. Gender differences in systemic inflammation and atheroma formation following Porphyromonas gingivalis infection in heterozygous apolipoprotein E-deficient mice. J Periodontal Res 2008; 44:569-77. [PMID: 18973527 DOI: 10.1111/j.1600-0765.2008.01156.x] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
BACKGROUND AND OBJECTIVE Men are at higher risk for periodontal and cardiovascular diseases compared with women, although they have lower serum levels of risk markers, including lipids and acute phase proteins. In this study, we investigated whether infection with a major periodontal pathogen, Porphyromonas gingivalis, affected the inflammatory and atherosclerotic response of male and female mice differently. MATERIAL AND METHODS Forty-eight heterozygous apolipoprotein E-deficient mice (24 males and 24 females), maintained on normal diet, were infected twice by intrasubcutaneous chamber injections of P. gingivalis or vehicle at weeks 11 and 14 of age. Serum samples were collected before the first infection and bi-weekly thereafter, to quantify levels of high-density lipoprotein (HDL) cholesterol and the murine acute phase protein, serum amyloid A (SAA). Mice were killed at week 17 to evaluate aortic atheroma lesion score. RESULTS Males had significantly higher baseline HDL cholesterol levels (p < 0.01, factorial ANOVA). Following P. gingivalis infection, HDL cholesterol levels decreased over time in infected males only [p < 0.05, generalized estimating equation (GEE)], whereas SAA levels increased and remained elevated over time in both male and female infected mice (p < 0.01, GEE). Lesion scores were significantly higher in infected mice (3-fold, p < 0.01, factorial ANOVA), and lesion scores of all mice were positively correlated with SAA levels at the time of killing (Spearman correlation coefficient = 0.40, p < 0.01). CONCLUSION In these young mice, P. gingivalis infection induced sex-specific changes in serum lipids but no gender differences in acute phase proteins and atheroma lesion score.
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Affiliation(s)
- C Champagne
- Center for Oral and Systemic Diseases, School of Dentistry, University of North Carolina Chapel Hill, Chapel Hill, NC 27599-7450, USA.
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Wang YF, Yancy WS, Yu D, Champagne C, Appel LJ, Lin PH. The relationship between dietary protein intake and blood pressure: results from the PREMIER study. J Hum Hypertens 2008; 22:745-54. [PMID: 18580887 DOI: 10.1038/jhh.2008.64] [Citation(s) in RCA: 66] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
Observational and clinical studies suggest that high protein intake, particularly protein from plant sources, might reduce blood pressure (BP). To examine the association of dietary protein with BP, we analysed data from PREMIER, an 18-month clinical trial (n=810) that examined the effects of two multi-component lifestyle modifications on BP. We examined the association of protein intake with BP, and in particular the independent relationship of plant and animal protein with BP. Multivariable linear regression analyses were performed with both cross-sectional and longitudinal data. Dietary plant protein was inversely associated with both systolic and diastolic BP in cross-sectional analyses at the 6-month follow-up (P=0.0045 and 0.0096, respectively). Fruit and vegetable intake was also inversely associated with both systolic and diastolic BP cross-sectionally at 6 months (P=0.0003 and 0.0157, respectively). In longitudinal analyses, a high intake of plant protein at 6 months was marginally associated with a reduction of both systolic and diastolic BP from baseline to 6 months only (P=0.0797 and 0.0866, respectively), independent of change in body weight and waist circumference. Furthermore, increased intake of plant protein, and fruits and vegetables was significantly associated with a lower risk of hypertension at 6 but not at 18 months. Results of this study indicate that plant protein had a beneficial effect on BP and was associated with a lower risk of hypertension at 6 months. Our data, in conjunction with other research, suggest that an increased intake of plant protein may be useful as a means to prevent and treat hypertension.
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Affiliation(s)
- Y F Wang
- Health and Productivity Management Program, Society of Health Risk Assessment and Control, Chinese Association of Preventive Medicine, 1202 Fortune International Center, Haidian District, Beijing, China.
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Siddhivarn C, Banes A, Champagne C, Riché EL, Weerapradist W, Offenbacher S. Mechanical loading and ?12prostaglandin J2induce bone morphogenetic protein-2, peroxisome proliferator-activated receptor ?-1, and bone nodule formation in an osteoblastic cell line. J Periodontal Res 2007; 42:383-92. [PMID: 17760815 DOI: 10.1111/j.1600-0765.2006.00965.x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Abstract
BACKGROUND AND OBJECTIVE We have previously reported that mechanical strain applied at a 1% level to an osteoblastic cell line induces the transcription of prostaglandin D2 synthase and increases the levels of prostaglandin D2 and its Delta12prostaglandin J2 metabolite. Mechanical strain also induces the expression of peroxisome proliferator-activated receptor gamma-1 and bone nodule formation. We hypothesized that mechanical load induces bone formation via Delta12prostaglandin J2-dependent synthesis of bone morphogenetic proteins. Our goal was to investigate the molecular events involved in osteogenesis induced by mechanical loading and Delta12prostaglandin J2, namely the induction of bone morphogenetic proteins and peroxisome proliferator-activated receptor gamma-1, a nuclear receptor for Delta12prostaglandin J2. MATERIAL AND METHODS Osteoblast monolayers were stretched for 1 h with a 1-h resting period and stretched for another hour at 1 Hz with 1% elongation. Cells were collected 0, 1, 6 and 16 h after stretching. Cyclooxygenase inhibitors and Delta12prostaglandin J2 were added in some experiments. Relative quantitative reverse transcriptase-polymerase chain reaction was used to examine whether the mRNA of bone morphogenetic protein-2, -4, -6, -7 and peroxisome proliferator-activated receptor gamma-1 was induced. Immunohistochemistry was used to evaluate bone morphogenetic protein expression in cells. RESULTS Mechanical strain significantly increased the mRNA expression of bone morphogenetic protein-2, -6, -7 and of peroxisome proliferator-activated receptor gamma-1, but not of bone morphogenetic protein-4. In stretched cells, bone morphogenetic protein-2 and peroxisome proliferator-activated receptor gamma-1 expression was blocked by cyclooxygenase inhibitors, but restored by exogenous Delta12prostaglandin J2. Delta12Prostaglandin J2 significantly enhanced bone nodule formation and bone morphogenetic protein-2 expression when added alone to resting osteoblasts. CONCLUSION These results suggest that the osteoblastic biomechanical pathways that trigger bone formation involve cyclooxygenase and prostaglandin D2 synthase activation, induction of Delta12prostaglandin J2 and its nuclear receptor, peroxisome proliferator-activated receptor gamma-1, and increased expression of bone morphogenetic protein-2. These data suggest that the Delta12prostaglandin J2/peroxisome proliferator-activated receptor gamma-1/bone morphogenetic protein-2 pathway plays an important role in osteogenesis.
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Affiliation(s)
- C Siddhivarn
- Center for Oral and Systemic Diseases and Department of Periodontology, School of Dentistry, University of North Carolina, Chapel Hill, NC 27599-7455, USA
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Siddhivarn C, Banes A, Champagne C, Riché EL, Weerapradist W, Offenbacher S. Mechanical loading and Δ12prostaglandin J2 induce bone morphogenetic protein-2, peroxisome proliferator-activated receptor γ-1, and bone nodule formation in an osteoblastic cell line. J Periodontal Res 2007. [DOI: 10.1111/j.1600-0765.2007.00965.x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Farnworth ER, Mainville I, Desjardins MP, Gardner N, Fliss I, Champagne C. Growth of probiotic bacteria and bifidobacteria in a soy yogurt formulation. Int J Food Microbiol 2007; 116:174-81. [PMID: 17292991 DOI: 10.1016/j.ijfoodmicro.2006.12.015] [Citation(s) in RCA: 106] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2006] [Revised: 11/14/2006] [Accepted: 12/29/2006] [Indexed: 11/28/2022]
Abstract
Soy beverage and cows' milk yogurts were produced with Steptococcus thermophilus (ATCC 4356) and Lactobacillus delbrueckii subsp. bulgaricus (IM 025). The drop in pH during fermentation was faster in the soy beverage than in cows' milk, but the final pH values were similar. Yogurts were prepared with a yogurt starter in conjunction with either the probiotic bacteria Lactobacillus johnsonii NCC533 (La-1), Lactobacillus rhamnosus ATCC 53103 (GG) or human derived bifidobacteria. The presence of the probiotic bacteria did not affect the growth of the yogurt strains. Approximately 2 log increases in both L. rhamnosus GG and L. johnsonii La-1 were observed when each was added with the yogurt strains in both cows' milk and the soy beverage. Two of the five bifidobacteria strains grew well in the cows' milk and soy beverage during fermentation with the yogurt bacteria. High pressure liquid chromatography (HPLC) analyses showed that the probiotic bacteria and the bifidobacteria were using different sugars to support their growth, depending on whether the bacteria were growing in cows' milk or soy beverage.
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Affiliation(s)
- E R Farnworth
- Agriculture and Agri-food Canada, CRDA, 3600 Casavant Blvd.,West, Saint Hyacinthe, QC, Canada J2S 8E3.
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Bales CW, McCrory M, Zheng J, Champagne C, Gilhooly C, Hannah J, Racette S, Martin C, Obert K, Das S, Delany J, Mandel S, Rochon J, Roberts S, Schechtman K. Quality of self‐selected diets of non‐obese participants in a randomized controlled trial of caloric restriction (CR): the CALERIE study. FASEB J 2007. [DOI: 10.1096/fasebj.21.5.a155-a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
| | - M McCrory
- Tufts UnivWashington StBostonMA02111
| | - J Zheng
- Washington UnivForest Park AveSt. LouisMO63108
| | - C Champagne
- Pennington Biomed Res CtrPerkins RdBaton RougeLA70808
| | | | | | - S Racette
- Washington UnivForest Park AveSt. LouisMO63108
| | - C Martin
- Pennington Biomed Res CtrPerkins RdBaton RougeLA70808
| | - K Obert
- Washington UnivForest Park AveSt. LouisMO63108
| | - S Das
- Tufts UnivWashington StBostonMA02111
| | - J Delany
- Pennington Biomed Res CtrPerkins RdBaton RougeLA70808
| | - S Mandel
- Washington UnivForest Park AveSt. LouisMO63108
| | - J Rochon
- Duke Clin Res InstBox 17969DurhamNC27715
| | - S Roberts
- Tufts UnivWashington StBostonMA02111
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Champetier de Ribes G, Fline M, Désormeaux AM, Eyma E, Montagut P, Champagne C, Pierre J, Pape W, Raccurt CP. [Intestinal helminthiasis in school children in Haiti in 2002]. Bull Soc Pathol Exot 2005; 98:127-32. [PMID: 16050381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
A survey on intestinal helminths in school children was conducted in Haiti in 2002. This first nationwide study involving the entire country was stratified by department according to urban and rural zones using the cluster method. Focusing on elementary school children (n=5792; age range 3 to 20 years), it involved 26 urban and 49 rural schools randomly selected. Stools were preserved in formalin and examined by the Ritchie technique. Thirty-four per cent of stools (1981/5792) tested positive for intestinal helminths with the following parasites identified: Ascaris lumbricoides (27.3%), Trichuris trichiura (7.3%), Necator americanus (3.8%), Hymenolepsis nana (2%), Taenia sp. (0.3%) and Strongyloides stercoralis (0.2%). The helminth prevalence was higher in rural (38.4%) compared to urban areas (30%). There was no significant difference in prevalence by sex and age. The importance of geohelminths changed from one department to another with the highest prevalence found in the Southern department of Grande Anse (73.7%) and the lowest prevalence in the Center department (20.6%). Five out of the country's nine departments had a similar prevalence varying from 25.5% to 28.2%. Intestinal helminthic polyparasitism was observed in a percentage of infested school children comprise between 3.4% and 28.6% according in relation to the geographical area. A program to fight against geohelminths in school children should be initiated as a public health priority. Albendazole is the drug of choice. Frequency of drug distribution should be based on the prevalence of geohelminths in each department.
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Affiliation(s)
- G Champetier de Ribes
- Service de Coopération et d'action culturelle, Ambassade de France en Haïti, Port-au-Prince, Haïti
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Dommergues M, Audibert F, Benattar C, Champagne C, Gomel V, Frydman R. Is routine amniocentesis for advanced maternal age still indicated? Fetal Diagn Ther 2001; 16:372-7. [PMID: 11694741 DOI: 10.1159/000053943] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
OBJECTIVE To evaluate a policy of selective rather than routine use of amniocentesis for advanced maternal age. METHOD A consecutive series of 359 pregnant women aged 38-47 underwent nuchal translucency measurement (NTM) at 10-14 weeks, maternal serum screening (MSS) by alpha-fetoprotein (AFP) and human chorionic gonadotropin (hCG) at 15-17 weeks, and second trimester ultrasound at 21-23 weeks. Women with NTM <3 mm, MSS-derived risk <1/250, and a normal second trimester sonography were considered at low risk and were suggested not to have an amniocentesis. RESULTS Either the NTM or MSS test was positive in 130 women; 105 (81%) of them elected to have an amniocentesis, versus 122 (53%) of 229 in whom both tests were negative (p < 0.001). Nineteen (5%) of 359 patients had NTM > or =3 mm; all 7 cases of Down's syndrome were in this group; 122 (34%) of 359 patients had a MSS-derived risk > or =1/250; 6 of the 7 cases of Down's syndrome were in this group: Ten patients had an abnormal second trimester ultrasound, 1 of which had trisomy 18. Of the 219 patients with MSS-derived risk <1/250, a NTM <3 mm, and a normal second trimester ultrasound, none had a baby with a chromosomal abnormality (95% confidence interval: 0-1.4%). CONCLUSION Amniocentesis may be offered on a selective rather than routine basis in women over 38, based upon the results of noninvasive screening tests.
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Affiliation(s)
- M Dommergues
- Department of Obstetrics and Gynecology, Hôpital Antoine Béclère, AP-HP and Université Paris XI, Clamart, France
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Audibert F, Dommergues M, Benattar C, Taieb J, Champagne C, Frydman R. [Diagnosis of trisomy 21: nuchal translucency and/or serum markers?]. Gynecol Obstet Fertil 2001; 29:599-604. [PMID: 11680948 DOI: 10.1016/s1297-9589(01)00192-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
OBJECTIVES To compare alternative methods of antenatal screening for Down's syndrome (nuchal translucency measurement and second trimester maternal serum screening) in a low-risk population and to evaluate the consequences of a sequential estimation of risk. METHODS In a consecutive series of 4308 women aged less than 38 with a singleton pregnancy, we examined the detection rate of nuchal translucency (NT) measurement at 10-14 weeks and maternal serum screening (MSS) by human chorionic gonadotropin and alpha-feto-protein at 14-18 weeks. Women with a NT measurement = 3 mm and women with a MSS derived risk = 1/250 were recommended to have an amniocentesis. A second trimester detailed ultrasound scan was also performed in all women. The outcome of all pregnancies was entered in a computerized database and the detection rate and false-positive rate of different screening strategies were analysed. RESULTS Of the 4308 pregnancies that were followed (mean maternal age 30.1 years), there were 12 cases of Down's syndrome (0.28%), all detected prenatally. Seven of twelve cases had a NT measurement above 3 mm (58%), and 6 out of ten cases with available MSS had a calculated risk = 1/250 (60%). Four of the five cases with NT measurement below 3 mm were detected by subsequent MSS. At a threshold giving 5% of positive tests, the sensitivity of NT screening and MSS were 75% and 60%, respectively. DISCUSSION AND CONCLUSION Sequential screening for Down's syndrome by nuchal translucency and second trimester biochemistry is effective and appears to increase the detection rate compared to the use of any single test. However, this strategy is likely to raise the false-positive rate and the interpretation of MSS derived risk should be combined to the first trimester NT measurement.
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Affiliation(s)
- F Audibert
- Service de gynécologie-obstétrique, hôpital Antoine-Béclère, 157, rue de la Porte de Trivaux, 92141 Clamart, France.
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Yadrick K, Horton J, Stuff J, McGee B, Bogle M, Davis L, Forrester I, Strickland E, Casey PH, Ryan D, Champagne C, Mellad K, Neal E, Zaghloul S. Perceptions of community nutrition and health needs in the Lower Mississippi Delta: a key informant approach. J Nutr Educ 2001; 33:266-77. [PMID: 12031177 DOI: 10.1016/s1499-4046(06)60291-1] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
OBJECTIVE Key informants' perceptions of nutrition and health needs in their southern rural communities were assessed prior to nutrition intervention planning. DESIGN This cross-sectional survey used in-person interviews. SUBJECTS/SETTINGS A sample of 490 individuals from 12 professional and lay roles in 8 community sectors in 36 counties in Arkansas, Louisiana, and Mississippi was chosen. STATISTICAL ANALYSES PERFORMED Factor analysis was carried out on reported food, nutrition, and health problems and contributing factors. The General Linear Models procedure identified within- and between-subject effects for factors. Tukey's post hoc tests identified differences between sectors and states. Frequencies and weighted rankings were computed for health problems. RESULTS Key informants rated individual-level factors (food choices, education, willingness to change, health behavior) as more important than community-level factors (food and health care access, resources) with regard to nutrition and health problems and contributors to problems. The number one health problem was hypertension. IMPLICATIONS Key informants are knowledgeable about nutrition and health problems, contributing factors, and available resources. Individual factors were perceived as more important contributors to nutrition and health problems providing valuable information for planning nutrition interventions.
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Affiliation(s)
- K Yadrick
- School of Family and Consumer Sciences, The University of Southern Mississippi, Hattiesburg, Mississippi 39406-5054, USA.
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