Priority effects transcend scales and disciplines in biology

Although primarily studied through the lens of community ecology, phenomena consistent with priority effects appear to be widespread across many different scenarios spanning a broad range of spatial, temporal, and biological scales. However, communication between these research fields is inconsistent and has resulted in a fragmented co-citation landscape, likely due to the diversity of terms used to refer to priority effects across these fields. We review these related terms, and the biological contexts in which they are used, to facilitate greater cross-disciplinary cohesion in research on priority effects. In breaking down these semantic barriers, we aim to provide a framework to better understand the conditions and mechanisms of priority effects, and their consequences across spatial and temporal scales.

Warming influences carbon and nitrogen assimilation between a widespread Ericaceous shrub and root-associated fungi

High-latitude ecosystems are warming faster than other biomes and are often dominated by a ground layer of Ericaceous shrubs, which can respond positively to warming. The carbon-for-nitrogen (C-for-N) exchange between Ericaceous shrubs and root-associated fungi may underlie shrub responses to warming, but has been understudied. In a glasshouse setting, we examined the effects of warming on the C-for-N exchange between the Ericaceous shrub Empetrum nigrum ssp. hermaphroditum and its root-associated fungi. We applied different 13 C and 15 N isotope labels, including a simple organic N form (glycine) and a complex organic N form (moss litter) and quantified their assimilation into soil, plant biomass, and root fungal biomass pools. We found that warming lowered the amount of 13 C partitioned to root-associated fungi per unit of glycine 15 N assimilated by E. nigrum, but only in the short term. By contrast, warming increased the amount of 13 C partitioned to root-associated fungi per unit of moss 15 N assimilated by E. nigrum. Our study suggests that climate warming affects the short-term exchange of C and N between a widespread Ericaceous shrub and root-associated fungi. Furthermore, while most isotope tracing studies use labile N sources, we demonstrate that a ubiquitous recalcitrant N source may produce contrasting results.

The origin of bi-dimensionality in plant root traits

Plant roots show extraordinary diversity in form and function in heterogeneous environments. Mounting evidence has shown global bi-dimensionality in root traits, the root economics spectrum (RES), and an orthogonal dimension describing mycorrhizal collaboration; however, the origin of the bi-dimensionality remains unresolved. Here, we propose that bi-dimensionality arises from the cylindrical geometry of roots, allometry between root cortex and stele, and independence between root cell wall thickness and cell number. Root geometry and mycorrhizal collaboration may both underlie the bi-dimensionality. Further, we emphasize why plant roots should be cylindrical rather than flat. Finally, we highlight the need to integrate organ-, cellular-, and molecular-level processes driving the bi-dimensionality in plant roots to fully understand plant diversity and functions.

Bamboo invasion alters Collembola community composition varying with life-forms

BACKGROUND

Plant invasions are a global concern. In eastern China, bamboo is rapidly expanding, negatively influencing neighbouring forest communities. However, studies on how bamboo invasion affects belowground communities, especially for soil invertebrates, are still lacking. In the present study, we focused on a highly abundant and diverse fauna taxon - Collembola. Collembola communities have three typical life-forms (i.e., epedaphic, hemiedaphic, and euedaphic) inhabiting different soil layers and playing distinct roles in ecological processes. Specifically, we studied their abundance, diversity, and community composition at the three stages of bamboo invasion: uninvaded secondary broadleaf forest, moderately invaded mixed bamboo forest, and completely invaded bamboo (Phyllostachys edulis) forest.

RESULTS

Our results showed that bamboo invasion negatively influenced Collembola communities by decreasing their abundance and diversity. Moreover, Collembola life-forms differed in their responses to bamboo invasion, with surface-dwelling Collembola being more vulnerable to bamboo invasion than soil-living Collembola.

CONCLUSION

Our findings indicate differential response patterns to bamboo invasion within Collembola communities. The negative effects of bamboo invasion on soil surface-dwelling Collembola may further influence ecosystem functioning. © 2023 Society of Chemical Industry.

Temporal dynamics of soil fungi in a pyrodiverse dry-sclerophyll forest

Fire is a major evolutionary and ecological driver that shapes biodiversity in forests. While above-ground community responses to fire have been well-documented, those below-ground are much less understood. However, below-ground communities, including fungi, play key roles in forests and facilitate the recovery of other organisms after fire. Here, we used internal transcribed spacer (ITS) meta-barcoding data from forests with three different times since fire [short (3 years), medium (13-19 years) and long (>26 years)] to characterize the temporal responses of soil fungal communities across functional groups, ectomycorrhizal exploration strategies and inter-guild associations. Our findings indicate that fire effects on fungal communities are strongest in the short to medium term, with clear distinctions between communities in forests with a short time (3 years) since fire, a medium time (13-19 years) and a long time (>26 years) since fire. Ectomycorrhizal fungi were disproportionately impacted by fire relative to saprotrophs, but the direction of the response varied depending on morphological structures and exploration strategies. For instance, short-distance ectomycorrhizal fungi increased with recent fire, while medium-distance (fringe) ectomycorrhizal fungi decreased. Further, we detected strong, negative inter-guild associations between ectomycorrhizal and saprotrophic fungi but only at medium and long times since fire. Given the functional significance of fungi, the temporal changes in fungal composition, inter-guild associations and functional groups after fire demonstrated in our study may have functional implications that require adaptive management to curtail.

Experimental warming causes mismatches in alpine plant-microbe-fauna phenology

Long-term observations have shown that many plants and aboveground animals have changed their phenology patterns due to warmer temperatures over the past decades. However, empirical evidence for phenological shifts in alpine organisms, particularly belowground organisms, is scarce. Here, we investigate how the activities and phenology of plants, soil microbes, and soil fauna will respond to warming in an alpine meadow on the Tibetan Plateau, and whether their potential phenological changes will be synchronized. We experimentally simulate an increase in soil temperature by 2-4 °C according to future projections for this region. We find that warming promotes plant growth, soil microbial respiration, and soil fauna feeding by 8%, 57%, and 20%, respectively, but causes dissimilar changes in their phenology during the growing season. Specifically, warming advances soil faunal feeding activity in spring and delays it in autumn, while their peak activity does not change; whereas warming increases the peak activity of plant growth and soil microbial respiration but with only minor shifts in their phenology. Such phenological asynchrony in alpine organisms may alter ecosystem functioning and stability.

Insights into the seed microbiome and its ecological significance in plant life

In recent years, the microbiome has attracted much attention because of the multiple roles and functions that microbes play in plants, animals, and human beings. Seed-associated microbes are of particular interest in being the initial microbial inoculum that affects the critical early life stages of a plant. The seed-microbe interactions are also known to improve nutrient acquisition, resilience against pathogens, and resistance against abiotic stresses. Despite these diverse roles, the seed microbiome has received little attention in plant ecology. Thus, we review the current knowledge on seed microbial diversity, community structure, and functions obtained through culture-dependent and culture-independent approaches. Furthermore, we present a comprehensive synthesis of the ecological literature on seed-microbe interactions to better understand the impact of these interactions on plant health and productivity. We suggest that future research should focus on the role of the seed microbiome in the establishment, colonization and spread of plant species in their native and non-native ranges as it may provide new insights into conservation biology and invasion ecology.

Drivers of nematode diversity in forest soils across climatic zones

Nematodes are the most abundant multi-cellular animals in soil, influencing key processes and functions in terrestrial ecosystems. Yet, little is known about the drivers of nematode abundance and diversity in forest soils across climatic zones. This is despite forests covering approximately 30% of the Earth's land surface, providing many crucial ecosystem services but strongly varying in climatic conditions and associated ecosystem properties across biogeographic zones. Here, we collected nematode samples from 13 forests across a latitudinal gradient. We divided this gradient into temperate, warm-temperate and tropical climatic zones and found that, across the gradient, nematode abundance and diversity were mainly influenced by soil organic carbon content. However, mean annual temperature and total soil phosphorus content in temperate zones, soil pH in warm-temperate zones, and mean annual precipitation in tropical zones were more important in driving nematode alpha-diversity, biomass and abundance. Additionally, nematode beta-diversity was higher in temperate than in warm-temperate and tropical zones. Together, our findings demonstrate that the drivers of nematode diversity in forested ecosystems are affected by the spatial scale and climatic conditions considered. This implies that high resolution studies are needed to accurately predict how soil functions respond if climate conditions move beyond the coping range of soil organisms.

Reducing plant-derived ethylene concentrations increases the resistance of temperate grassland to drought

Model predictions indicate that extreme drought events will occur more frequently by the end of this century, with major implications for terrestrial ecosystem functions such as plant productivity and soil respiration. Previous studies have shown that drought-induced ethylene produced by plants is a key factor affecting plant growth and development, but the impact of drought-induced ethylene on ecosystem functions in natural settings has not yet been tested. Here, we reduced the amount of plant-derived ethylene concentrations by adding the ethylene inhibitor aminoethoxyvinylglycine (AVG), and investigated in situ plant productivity, soil respiration and ethylene concentrations for two years in a semi-arid temperate grassland in Inner Mongolia, China. Drought significantly reduced plant productivity and soil respiration, but the application of AVG reduced ethylene concentrations and significantly increased aboveground plant productivity and soil respiration, effectively enhancing resistance to drought. The reason for this could be that AVG application increased the activity of 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase and abundance of the acdS gene (the key gene for ACC deaminase), facilitating reduced ACC concentrations in the plant tissue and reduced in planta ethylene synthesis. In addition, there was a significant correlation between soil ACC deaminase activity and plant productivity. Given the global distribution of arid and semi-arid areas, and the expected increases in the frequency and intensity of drought stress, this is a significant concern. These results provide novel evidence of the impact of drought-induced plant ethylene production on ecosystem functions in semi-arid temperate grassland ecosystems.

Ericoid shrubs shape fungal communities and suppress organic matter decomposition in boreal forests

Mycorrhizal fungi associated with boreal trees and ericaceous shrubs are central actors in organic matter (OM) accumulation through their belowground carbon allocation, their potential capacity to mine organic matter for nitrogen (N) and their ability to suppress saprotrophs. Yet, interactions between co-occurring ectomycorrhizal fungi (EMF), ericoid mycorrhizal fungi (ERI), and saprotrophs are poorly understood. We used a long-term (19 yr) plant functional group manipulation experiment with removals of tree roots, ericaceous shrubs and mosses and analysed the responses of different fungal guilds (assessed by metabarcoding) and their interactions in relation to OM quality (assessed by mid-infrared spectroscopy and nuclear magnetic resonance) and decomposition (litter mesh-bags) across a 5000-yr post-fire boreal forest chronosequence. We found that the removal of ericaceous shrubs and associated ERI changed the composition of EMF communities, with larger effects occurring at earlier stages of the chronosequence. Removal of shrubs was associated with enhanced N availability, litter decomposition and enrichment of the recalcitrant OM fraction. We conclude that increasing abundance of slow-growing ericaceous shrubs and the associated fungi contributes to increasing nutrient limitation, impaired decomposition and progressive OM accumulation in boreal forests, particularly towards later successional stages. These results are indicative of the contrasting roles of EMF and ERI in regulating belowground OM storage.

Responses of bryosphere fauna to drought across a boreal forest chronosequence

Projected changes in precipitation regimes can greatly impact soil biota, which in turn alters key ecosystem functions. In moss-dominated ecosystems, the bryosphere (i.e., the ground moss layer including live and senesced moss) plays a key role in carbon and nutrient cycling, and it hosts high abundances of microfauna (i.e., nematodes and tardigrades) and mesofauna (i.e., mites and springtails). However, we know very little about how bryosphere fauna responds to precipitation, and whether this response changes across environmental gradients. Here, we used a mesocosm experiment to study the effect of volume and frequency of precipitation on the abundance and community composition of functional groups of bryosphere fauna. Hylocomium splendens bryospheres were sampled from a long-term post-fire boreal forest chronosequence in northern Sweden which varies greatly in environmental conditions. We found that reduced precipitation promoted the abundance of total microfauna and of total mesofauna, but impaired predaceous/omnivorous nematodes, and springtails. Generally, bryosphere fauna responded more strongly to precipitation volume than to precipitation frequency. For some faunal functional groups, the effects of precipitation frequency were stronger at reduced precipitation volumes. Context-dependency effects were found for microfauna only: microfauna was more sensitive to precipitation in late-successional forests (i.e., those with lower productivity and soil nutrient availability) than in earlier-successional forests. Our results also suggest that drought-induced changes in trophic interactions and food resources in the bryosphere may increase faunal abundance. Consequently, drier bryospheres that may result from climate change could promote carbon and nutrient turnover from fauna activity, especially in older, less productive forests.

Contribution of soil algae to the global carbon cycle

Soil photoautotrophic prokaryotes and micro-eukaryotes - known as soil algae - are, together with heterotrophic microorganisms, a constitutive part of the microbiome in surface soils. Similar to plants, they fix atmospheric carbon (C) through photosynthesis for their own growth, yet their contribution to global and regional biogeochemical C cycling still remains quantitatively elusive. Here, we compiled an extensive dataset on soil algae to generate a better understanding of their distribution across biomes and predict their productivity at a global scale by means of machine learning modelling. We found that, on average, (5.5 ± 3.4) × 10⁶ algae inhabit each gram of surface soil. Soil algal abundance especially peaked in acidic, moist and vegetated soils. We estimate that, globally, soil algae take up around 3.6 Pg C per year, which corresponds to c. 6% of the net primary production of terrestrial vegetation. We demonstrate that the C fixed by soil algae is crucial to the global C cycle and should be integrated into land-based efforts to mitigate C emissions.

Climatic conditions, not above- and belowground resource availability and uptake capacity, mediate tree diversity effects on productivity and stability

Tree species diversity promotes multiple ecosystem functions and services. However, little is known about how above- and belowground resource availability (light, nutrients, and water) and resource uptake capacity mediate tree species diversity effects on aboveground wood productivity and temporal stability of productivity in European forests and whether the effects differ between humid and arid regions. We used the data from six major European forest types along a latitudinal gradient to address those two questions. We found that neither leaf area index (a proxy for light uptake capacity), nor fine root biomass (a proxy for soil nutrient and water uptake capacity) was related to tree species richness. Leaf area index did, however, enhance productivity, but negatively affected stability. Productivity was further promoted by soil nutrient availability, while stability was enhanced by fine root biomass. We only found a positive effect of tree species richness on productivity in arid regions and a positive effect on stability in humid regions. This indicates a possible disconnection between productivity and stability regarding tree species richness effects. In other words, the mechanisms that drive the positive effects of tree species richness on productivity do not per se benefit stability simultaneously. Our findings therefore suggest that tree species richness effects are largely mediated by differences in climatic conditions rather than by differences in above- and belowground resource availability and uptake capacity at the regional scales.

Think globally, measure locally: The MIREN standardized protocol for monitoring plant species distributions along elevation gradients

Climate change and other global change drivers threaten plant diversity in mountains worldwide. A widely documented response to such environmental modifications is for plant species to change their elevational ranges. Range shifts are often idiosyncratic and difficult to generalize, partly due to variation in sampling methods. There is thus a need for a standardized monitoring strategy that can be applied across mountain regions to assess distribution changes and community turnover of native and non‐native plant species over space and time. Here, we present a conceptually intuitive and standardized protocol developed by the Mountain Invasion Research Network (MIREN) to systematically quantify global patterns of native and non‐native species distributions along elevation gradients and shifts arising from interactive effects of climate change and human disturbance. Usually repeated every five years, surveys consist of 20 sample sites located at equal elevation increments along three replicate roads per sampling region. At each site, three plots extend from the side of a mountain road into surrounding natural vegetation. The protocol has been successfully used in 18 regions worldwide from 2007 to present. Analyses of one point in time already generated some salient results, and revealed region‐specific elevational patterns of native plant species richness, but a globally consistent elevational decline in non‐native species richness. Non‐native plants were also more abundant directly adjacent to road edges, suggesting that disturbed roadsides serve as a vector for invasions into mountains. From the upcoming analyses of time series, even more exciting results can be expected, especially about range shifts. Implementing the protocol in more mountain regions globally would help to generate a more complete picture of how global change alters species distributions. This would inform conservation policy in mountain ecosystems, where some conservation policies remain poorly implemented.

Bryosphere Loss Impairs Litter Decomposition Consistently Across Moss Species, Litter Types, and Micro-Arthropod Abundance

The bryosphere (that is, ground mosses and their associated biota) is a key driver of nutrient and carbon dynamics in many terrestrial ecosystems, in part because it regulates litter decomposition. However, we have a poor understanding of how litter decomposition responds to changes in the bryosphere, including changes in bryosphere cover, moss species, and bryosphere-associated biota. Specifically, the contribution of micro-arthropods to litter decomposition in the bryosphere is unclear. Here, we used a 16-month litterbag field experiment in two boreal forests to investigate bryosphere effects on litter decomposition rates among two moss species (Pleurozium schreberi and Hylocomium splendens), and two litter types (higher-quality Betula pendula litter and lower-quality P. schreberi litter). Additionally, we counted all micro-arthropods in the litterbags and identified them to functional groups. We found that bryosphere removal reduced litter decomposition rates by 28% and micro-arthropod abundance by 29% and led to a colder micro-climate. Litter decomposition rates and micro-arthropod abundance were uncorrelated overall, but were positively correlated in B. pendula litterbags. Bryosphere effects on litter decomposition rates were consistent across moss species, litter types, and micro-arthropod abundances and community compositions. These findings suggest that micro-arthropods play a minor role in litter decomposition in the boreal forest floor, suggesting that other factors (for example, micro-climate, nutrient availability) likely drive the positive effect of the bryosphere on decomposition rates. Our results point to a substantial and consistent impairment of litter decomposition in response to loss of moss cover, which could have important implications for nutrient and carbon cycling in moss-dominated ecosystems.

Carbon limitation overrides acidification in mediating soil microbial activity to nitrogen enrichment in a temperate grassland

Higher ecosystem nitrogen (N) inputs resulting from human activities often suppress soil microbial biomass and respiration, thereby altering biogeochemical cycling. Soil acidification and carbon (C) limitation may drive these microbial responses, yet their relative importance remains elusive, which limits our understanding of the longer term effects of increasing N inputs. In a field experiment with continuous N addition at seven different rates from 0 to 50 g N m^-2  year^-1 over 6 years in a temperate grassland of Inner Mongolia, China, we examined the responses of soil microbial biomass and respiration to changes in soil acidity and C availability by adding lime and/or glucose to soil samples. Soil microbial biomass and respiration did only weakly respond to increasing soil pH, but increased strongly in response to higher C availability with increasing N addition rates. Soil net N immobilization increased in response to glucose addition, and soil microbial biomass increased at higher rates than microbial respiration along the gradient of previous N addition rates, both suggesting increasingly reinforced microbial C limitation with increasing N addition. Our results provide clear evidence for strong N-induced microbial C limitation, but only little support for soil acidity effects within the initial pH range of 4.73-7.86 covered by our study. Field data support this conclusion by showing reduced plant C allocation belowground in response to N addition, resulting in soil microbial C starvation over the long term. In conclusion, soil microbial biomass and respiration under N addition were strongly dependent on C availability, most likely originating from plant belowground C inputs, and was much less affected by changes in soil pH. Our data help clarify a long-standing debate about how increasing N input rates affect soil microbial biomass and respiration, and improve the mechanistic understanding of the linkages between ecosystem N enrichment and C cycling.

The diversity of soil mesofauna declines after bamboo invasion in subtropical China

Plant invasions often act as ecosystem 'simplifiers' to simplify diversity and community structure of soil biota. However, inconsistent relationships between plant invasion and soil fauna have been found and few studies have addressed how soil fauna communities change upon plant invasions across taxa and feeding guilds. Here, we investigated the effects of moso bamboo (Phyllostachys edulis) invasion in subtropical China on soil mesofauna communities using novel high-throughput sequencing (HTS). Specifically, we analyzed the spatio-temporal dynamics of fauna diversity and feeding guilds in the litter and soil layers for three stages of moso bamboo invasion, i.e., uninvaded (secondary broadleaved forest), moderately invaded (mixed bamboo forest) and completely invaded (P. edulis forest). Overall, we found that the completely invaded bamboo forest decreased species richness and diversity of total fauna, herbivores, and microbivores consistently across different soil layers, but less so detritivores and predators. Although we did not find any interaction effects of bamboo invasion and soil layers on soil fauna diversity indices, significant interaction effects were found on the community composition, for total fauna and their feeding guilds. Specifically, the detrimental effects of bamboo invasion on the trophic structure of soil fauna communities were more profound in the litter layer than in the soil layer, suggesting that a litter layer with more diverse taxa does not mean higher resistance to plant invasion in maintaining the soil food web structure. Taken together, our findings suggest that different responses within fauna feeding guilds to plant invasion were pervasive, and a deeper soil layer may better alleviate the negative effects of pant invasion on fauna community structure. These shifts in soil biodiversity may further degrade ecosystem functioning.

Soil biotic and abiotic effects on seedling growth exhibit context-dependent interactions: evidence from a multi-country experiment on Pinus contorta invasion

The success of invasive plants is influenced by many interacting factors, but evaluating multiple possible mechanisms of invasion success and elucidating the relative importance of abiotic and biotic drivers is challenging, and therefore rarely achieved. We used live, sterile or inoculated soil from different soil origins (native range and introduced range plantation; and invaded plots spanning three different countries) in a fully factorial design to simultaneously examine the influence of soil origin and soil abiotic and biotic factors on the growth of invasive Pinus contorta. Our results displayed significant context dependency in that certain soil abiotic conditions in the introduced ranges (soil nitrogen, phosphorus or carbon content) influenced responses to inoculation treatments. Our findings do not support the enemy release hypothesis or the enhanced mutualism hypothesis, as biota from native and plantation ranges promoted growth similarly. Instead, our results support the missed mutualism hypothesis, as biota from invasive ranges were the least beneficial for seedling growth. Our study provides a novel perspective on how variation in soil abiotic factors can influence plant-soil feedbacks for an invasive tree across broad biogeographical contexts.

Plant-Soil Feedbacks and Temporal Dynamics of Plant Diversity-Productivity Relationships

Plant-soil feedback (PSF) and diversity-productivity relationships are important research fields to study drivers and consequences of changes in plant biodiversity. While studies suggest that positive plant diversity-productivity relationships can be explained by variation in PSF in diverse plant communities, key questions on their temporal relationships remain. Here, we discuss three processes that change PSF over time in diverse plant communities, and their effects on temporal dynamics of diversity-productivity relationships: spatial redistribution and changes in dominance of plant species; phenotypic shifts in plant traits; and dilution of soil pathogens and increase in soil mutualists. Disentangling these processes in plant diversity experiments will yield new insights into how plant diversity-productivity relationships change over time.

Spatiotemporal patterns and drivers of methane uptake across a climate transect in Inner Mongolia Steppe

Steppe soils are important biological sinks for atmospheric methane (CH₄), but the strength of CH₄ uptake remains uncertain due to large spatiotemporal variation and the lack of in situ measurements at regional scale. Here, we report the seasonal and spatial patterns of CH₄ uptake across a 1200 km transect in arid and semi-arid steppe ecosystems in Inner Mongolia, ranging from meadow steppe in the east plain to typical and desert steppes on the west plateau. In general, seasonal patterns of CH₄ uptake were site specific, with unimodal seasonal curves in meadow and typical steppes and a decreasing seasonal trend in desert steppe. Soil moisture was the dominant factor explaining the seasonal patterns of CH₄ uptake, and CH₄ uptake rate decreased with an increase in soil moisture. Across the transect, CH₄ uptake showed a skewed unimodal spatial pattern, with the peak rate observed in the typical steppe sites and with generally higher uptake rates in the west plateau than in the east plain. Soil moisture, together with soil temperature, soil total carbon, and aboveground plant biomass, were the main drivers of the regional patterns of CH₄ uptake rate. These findings are important for model development to more precisely estimate the soil CH₄ sink capacity in arid and semi-arid regions.

Root trait-microbial relationships across tundra plant species

Fine roots, and their functional traits, influence associated rhizosphere microorganisms via root exudation and root litter quality. However, little information is known about their relationship with rhizosphere microbial taxa and functional guilds. We investigated the relationships of 11 fine root traits of 20 sub-arctic tundra meadow plant species and soil microbial community composition, using phospholipid fatty acids (PLFAs) and high-throughput sequencing. We primarily focused on the root economics spectrum, as it provides a useful framework to examine plant strategies by integrating the co-ordination of belowground root traits along a resource acquisition-conservation trade-off axis. We found that the chemical axis of the fine root economics spectrum was positively related to fungal to bacterial ratios, but negatively to Gram-positive to Gram-negative bacterial ratios. However, this spectrum was unrelated to the relative abundance of functional guilds of soil fungi. Nevertheless, the relative abundance of arbuscular mycorrhizal fungi was positively correlated to root carbon content, but negatively to the numbers of root forks per root length. Our results suggest that the fine root economics spectrum is important for predicting broader groups of soil microorganisms (i.e. fungi and bacteria), while individual root traits may be more important for predicting soil microbial taxa and functional guilds.

Globally, plant-soil feedbacks are weak predictors of plant abundance

Plant-soil feedbacks (PSFs) have been shown to strongly affect plant performance under controlled conditions, and PSFs are thought to have far reaching consequences for plant population dynamics and the structuring of plant communities. However, thus far the relationship between PSF and plant species abundance in the field is not consistent. Here, we synthesize PSF experiments from tropical forests to semiarid grasslands, and test for a positive relationship between plant abundance in the field and PSFs estimated from controlled bioassays. We meta-analyzed results from 22 PSF experiments and found an overall positive correlation (0.12 ≤  r ¯  ≤ 0.32) between plant abundance in the field and PSFs across plant functional types (herbaceous and woody plants) but also variation by plant functional type. Thus, our analysis provides quantitative support that plant abundance has a general albeit weak positive relationship with PSFs across ecosystems. Overall, our results suggest that harmful soil biota tend to accumulate around and disproportionately impact species that are rare. However, data for the herbaceous species, which are most common in the literature, had no significant abundance-PSFs relationship. Therefore, we conclude that further work is needed within and across biomes, succession stages and plant types, both under controlled and field conditions, while separating PSF effects from other drivers (e.g., herbivory, competition, disturbance) of plant abundance to tease apart the role of soil biota in causing patterns of plant rarity versus commonness.

Short-term effects of snow cover manipulation on soil bacterial diversity and community composition

Winter snow cover is a major driver of soil microbial processes in high-latitude and high-altitude ecosystems. Warming-induced reduction in snow cover as predicted under future climate scenarios may shift soil bacterial communities with consequences for soil carbon and nutrient cycling. The underlying mechanisms, however, remain elusive. In the present study, we conducted a snow manipulation experiment in a Tibetan spruce forest to explore the immediate and intra-annual legacy effects of snow exclusion on soil bacterial communities. We analyzed bacterial diversity and community composition in the winter (i.e., the deep snow season), in the transitional thawing period, and in the middle of the growing season. Proteobacteria, Acidobacteria, and Actinobacteria were dominant phyla across the seasons and snow regimes. Bacterial diversity was generally not particularly sensitive to the absence of snow cover. However, snow exclusion positively affected Simpson diversity in the winter but not in the thawing period and the growing season. Bacterial diversity further tended to be higher in winter than in the growing season. In the winter, the taxonomic composition shifted in response to snow exclusion, while composition did not differ between exclusion and control plots in the thawing period and the growing season. Soil bacterial communities strongly varied across seasons, and the variations differed in specific groups. Both soil climatic factors (i.e., temperature and moisture) and soil biochemical variables partly accounted for the seasonal dynamics of bacterial communities. Taken together, our study indicates that soil bacterial communities in Tibetan forests are rather resilient to change in snow cover, at least at an intra-annual scale.

Rhizosphere control of soil nitrogen cycling: a key component of plant economic strategies

Understanding how plant species influence soil nutrient cycling is a major theme in terrestrial ecosystem ecology. However, the prevailing paradigm has mostly focused on litter decomposition, while rhizosphere effects on soil organic matter (SOM) decomposition have attracted little attention. Using a dual ¹³ C/¹⁵ N labeling approach in a 'common garden' glasshouse experiment, we investigated how the economic strategies of 12 grassland plant species (graminoids, forbs and legumes) drive soil nitrogen (N) cycling via rhizosphere processes, and how this in turn affects plant N acquisition and growth. Acquisitive species with higher photosynthesis, carbon rhizodeposition and N uptake than conservative species induced a stronger acceleration of soil N cycling through rhizosphere priming of SOM decomposition. This allowed them to take up larger amounts of N and allocate it above ground to promote photosynthesis, thereby sustaining their faster growth. The N₂ -fixation ability of legumes enhanced rhizosphere priming by promoting photosynthesis and rhizodeposition. Our study demonstrates that the economic strategies of plant species regulate a plant-soil carbon-nitrogen feedback operating through the rhizosphere. These findings provide novel mechanistic insights into how plant species with contrasting economic strategies sustain their nutrition and growth through regulating the cycling of nutrients by soil microbes in their rhizosphere.

Effects of plant functional group removal on CO2 fluxes and belowground C stocks across contrasting ecosystems

Changes in plant communities can have large effects on ecosystem carbon (C) dynamics and long‐term C stocks. However, how these effects are mediated by environmental context or vary among ecosystems is not well understood. To study this, we used a long‐term plant removal experiment set up across 30 forested lake islands in northern Sweden that collectively represent a strong gradient of soil fertility and ecosystem productivity. We measured forest floor CO₂ exchange and aboveground and belowground C stocks for a 22‐yr experiment involving factorial removal of the two dominant functional groups of the boreal forest understory, namely ericaceous dwarf shrubs and feather mosses, on each of the 30 islands. We found that long‐term shrub and moss removal increased forest floor net CO₂ loss and decreased belowground C stocks consistently across the islands irrespective of their productivity or soil fertility. However, we did see context‐dependent responses of respiration to shrub removals because removals only increased respiration on islands of intermediate productivity. Both CO₂ exchange and C stocks responded more strongly to shrub removal than to moss removal. Shrub removal reduced gross primary productivity of the forest floor consistently across the island gradient, but it had no effect on respiration, which suggests that loss of belowground C caused by the removals was driven by reduced litter inputs. Across the island gradient, shrub removal consistently depleted C stocks in the soil organic horizon by 0.8 kg C/m². Our results show that the effect of plant functional group diversity on C dynamics can be relatively consistent across contrasting ecosystems that vary greatly in productivity and soil fertility. These findings underline the key role of understory vegetation in forest C cycling, and suggest that global change leading to changes in the relative abundance of both shrubs and mosses could impact on the capacity of boreal forests to store C.

Soil functional biodiversity and biological quality under threat: intensive land use outweighs climate change

Climate change and land use intensification are the two most common global change drivers of biodiversity loss. Like other organisms, the soil meso-fauna are expected to modify their functional diversity and composition in response to climate and land use changes. Here, we investigated the functional responses of Collembola, one of the most abundant and ecologically important groups of soil invertebrates. This study was conducted at the Global Change Experimental Facility (GCEF) in central Germany, where we tested the effects of climate (ambient vs. 'future' as projected for this region for the years between 2070 and 2100), land use (conventional farming, organic farming, intensively-used meadow, extensively-used meadow, and extensively-used pasture), and their interactions on the functional diversity (FD), community-weighted mean (CWM) traits (life-history, morphology), and functional composition of Collembola, as well as the Soil Biological Quality-Collembola (QBS-c) index. We found that land use was overwhelmingly the dominant driver of shifts in functional diversity, functional traits, and functional composition of Collembola, and of shifts in soil biological quality. These significant land use effects were mainly due to the differences between the two main land use types, i.e. cropland vs. grasslands. Specifically, Collembola functional biodiversity and soil biological quality were significantly lower in croplands than grasslands. However, no interactive effect of climate × land use was found in this study, suggesting that land use effects on Collembola were independent of the climate change scenario. Overall, our study shows that functional responses of Collembola are highly vulnerable to land use intensification under both climate scenarios. We conclude that land use changes reduce functional biodiversity and biological quality of soil.

Annual ecosystem respiration is resistant to changes in freeze-thaw periods in semi-arid permafrost

Warming in cold regions alters freezing and thawing (F-T) of soil in winter, exposing soil organic carbon to decomposition. Carbon-rich permafrost is expected to release more CO₂ to the atmosphere through ecosystem respiration (Re) under future climate scenarios. However, the mechanisms of the responses of freeze-thaw periods to climate change and their coupling with Re in situ are poorly understood. Here, using 2 years of continuous data, we test how changes in F-T events relate to annual Re under four warming levels and precipitation addition in a semi-arid grassland with discontinuous alpine permafrost. Warming shortened the entire F-T period because the frozen period shortened more than the extended freezing period. It decreased total Re during the F-T period mainly due to decrease in mean Re rate. However, warming did not alter annual Re because of reduced soil water content and the small contribution of total Re during the F-T period to annual Re. Although there were no effects of precipitation addition alone or interactions with warming on F-T events, precipitation addition increased total Re during the F-T period and the whole year. This decoupling between changes in soil freeze-thaw events and annual Re could result from their different driving factors. Our results suggest that annual Re could be mainly determined by soil water content rather than by change in freeze-thaw periods induced by warming in semi-arid alpine permafrost.

A global database of soil nematode abundance and functional group composition

As the most abundant animals on earth, nematodes are a dominant component of the soil community. They play critical roles in regulating biogeochemical cycles and vegetation dynamics within and across landscapes and are an indicator of soil biological activity. Here, we present a comprehensive global dataset of soil nematode abundance and functional group composition. This dataset includes 6,825 georeferenced soil samples from all continents and biomes. For geospatial mapping purposes these samples are aggregated into 1,933 unique 1-km pixels, each of which is linked to 73 global environmental covariate data layers. Altogether, this dataset can help to gain insight into the spatial distribution patterns of soil nematode abundance and community composition, and the environmental drivers shaping these patterns.

Nonlinearity of root trait relationships and the root economics spectrum

The root economics spectrum (RES), a common hypothesis postulating a tradeoff between resource acquisition and conservation traits, is being challenged by conflicting relationships between root diameter, tissue density (RTD) and root nitrogen concentration (RN). Here, we analyze a global trait dataset of absorptive roots for over 800 plant species. For woody species (but not for non-woody species), we find nonlinear relationships between root diameter and RTD and RN, which stem from the allometric relationship between stele and cortical tissues. These nonlinear relationships explain how sampling bias from different ends of the nonlinear curves can result in conflicting trait relationships. Further, the shape of the relationships varies depending on evolutionary context and mycorrhizal affiliation. Importantly, the observed nonlinear trait relationships do not support the RES predictions. Allometry-based nonlinearity of root trait relationships improves our understanding of the ecology, physiology and evolution of absorptive roots.

Kong et al. use a global trait dataset of 800 plant species to examine the root economics spectrum in relation to root diameter, tissue density and root nitrogen concentration. Nonlinear trait relationships were observed, suggesting allometry-based nonlinearity in root trait relationships.

Effects of plant functional group removal on structure and function of soil communities across contrasting ecosystems

Loss of plant diversity has an impact on ecosystems worldwide, but we lack a mechanistic understanding of how this loss may influence below-ground biota and ecosystem functions across contrasting ecosystems in the long term. We used the longest running biodiversity manipulation experiment across contrasting ecosystems in existence to explore the below-ground consequences of 19 years of plant functional group removals for each of 30 contrasting forested lake islands in northern Sweden. We found that, against expectations, the effects of plant removals on the communities of key groups of soil organisms (bacteria, fungi and nematodes), and organic matter quality and soil ecosystem functioning (decomposition and microbial activity) were relatively similar among islands that varied greatly in productivity and soil fertility. This highlights that, in contrast to what has been shown for plant productivity, plant biodiversity loss effects on below-ground functions can be relatively insensitive to environmental context or variation among widely contrasting ecosystems.

Comparison of plant-soil feedback experimental approaches for testing soil biotic interactions among ecosystems

The study of interactions and feedbacks between plants and soils is a rapidly expanding research area, and a primary tool used in this field is to perform glasshouse experiments where soil biota are manipulated. Recently, there has been vigorous debate regarding the correctness of methods for carrying out these types of experiment, and specifically whether it is legitimate to mix soils from different sites or plots (mixed soil sampling, MSS) or not (independent soil sampling, ISS) to create either soil inoculum treatments or subjects. We performed the first empirical comparison of MSS vs ISS approaches by comparing growth of two boreal tree species (Picea abies and Pinus sylvestris) in soils originating from 10 sites near the boreal forest limit in northern Sweden, and 10 sites in the subarctic region where boreal forests may potentially expand as a result of climate change. We found no consistent differences in the conclusions that we reached whether we used MSS or ISS approaches. We propose that researchers should not choose a soil handling method based on arguments that one method is inherently more correct than the other, but rather that method choice should be based on correct alignment with specific research questions and goals.

How anthropogenic shifts in plant community composition alter soil food webs

There are great concerns about the impacts of soil biodiversity loss on ecosystem functions and services such as nutrient cycling, food production, and carbon storage. A diverse community of soil organisms that together comprise a complex food web mediates such ecosystem functions and services. Recent advances have shed light on the key drivers of soil food web structure, but a conceptual integration is lacking. Here, we explore how human-induced changes in plant community composition influence soil food webs. We present a framework describing the mechanistic underpinnings of how shifts in plant litter and root traits and microclimatic variables impact on the diversity, structure, and function of the soil food web. We then illustrate our framework by discussing how shifts in plant communities resulting from land-use change, climatic change, and species invasions affect soil food web structure and functioning. We argue that unravelling the mechanistic links between plant community trait composition and soil food webs is essential to understanding the cascading effects of anthropogenic shifts in plant communities on ecosystem functions and services.

Consistent effects of biodiversity loss on multifunctionality across contrasting ecosystems

Understanding how loss of biodiversity affects ecosystem functioning, and thus the delivery of ecosystem goods and services, has become increasingly necessary in a changing world. Considerable recent attention has focused on predicting how biodiversity loss simultaneously impacts multiple ecosystem functions (that is, ecosystem multifunctionality), but the ways in which these effects vary across ecosystems remain unclear. Here, we report the results of two 19-year plant diversity manipulation experiments, each established across a strong environmental gradient. Although the effects of plant and associated fungal diversity loss on individual functions frequently differed among ecosystems, the consequences of biodiversity loss for multifunctionality were relatively invariant. However, the context-dependency of biodiversity effects also worked in opposing directions for different individual functions, meaning that similar multifunctionality values across contrasting ecosystems could potentially mask important differences in the effects of biodiversity on functioning among ecosystems. Our findings highlight that an understanding of the relative contribution of species or functional groups to individual ecosystem functions among contrasting ecosystems and their interactions (that is, complementarity versus competition) is critical for guiding management efforts aimed at maintaining ecosystem multifunctionality and the delivery of multiple ecosystem services.