Cryptic behavior and activity cycles of a small mammal keystone species revealed through accelerometry: a case study of Merriam's kangaroo rats (Dipodomys merriami)

BACKGROUND

Kangaroo rats are small mammals that are among the most abundant vertebrates in many terrestrial ecosystems in Western North America and are considered both keystone species and ecosystem engineers, providing numerous linkages between other species as both consumers and resources. However, there are challenges to studying the behavior and activity of these species due to the difficulty of observing large numbers of individuals that are small, secretive, and nocturnal. Our goal was to develop an integrated approach of miniaturized animal-borne accelerometry and radiotelemetry to classify the cryptic behavior and activity cycles of kangaroo rats and test hypotheses of how their behavior is influenced by light cycles, moonlight, and weather.

METHODS

We provide a proof-of-concept approach to effectively quantify behavioral patterns of small bodied (< 50 g), nocturnal, and terrestrial free-ranging mammals using large acceleration datasets by combining low-mass, miniaturized animal-borne accelerometers with radiotelemetry and advanced machine learning techniques. We developed a method of attachment and retrieval for deploying accelerometers, a non-disruptive method of gathering observational validation datasets for acceleration data on free-ranging nocturnal small mammals, and used these techniques on Merriam's kangaroo rats to analyze how behavioral patterns relate to abiotic factors.

RESULTS

We found that Merriam's kangaroo rats are only active during the nighttime phases of the diel cycle and are particularly active during later light phases of the night (i.e., late night, morning twilight, and dawn). We found no reduction in activity or foraging associated with moonlight, indicating that kangaroo rats are actually more lunarphilic than lunarphobic. We also found that kangaroo rats increased foraging effort on more humid nights, most likely as a mechanism to avoid cutaneous water loss.

CONCLUSIONS

Small mammals are often integral to ecosystem functionality, as many of these species are highly abundant ecosystem engineers driving linkages in energy flow and nutrient transfer across trophic levels. Our work represents the first continuous detailed quantitative description of fine-scale behavioral activity budgets in kangaroo rats, and lays out a general framework for how to use miniaturized biologging devices on small and nocturnal mammals to examine behavioral responses to environmental factors.

Quantifying the direct and indirect effects of sika deer (Cervus nippon) on the prevalence of infection with Rickettsia in questing Haemaphysalis megaspinosa: A field experimental study

Sika deer (Cervus nippon) are important hosts for all life stages of Haemaphysalis megaspinosa, a suspected Rickettsia vector. Because some Rickettsia are unlikely to be amplified by deer in Japan, the presence of deer may decrease the prevalence of Rickettsia infection in questing H. megaspinosa. As sika deer decrease vegetation cover and height and thereby indirectly cause changes in the abundance of other hosts, including reservoirs of Rickettsia, the prevalence of Rickettsia infection in questing ticks can also change. We investigated these possible effects of deer on the prevalence of infection with Rickettsia in questing ticks in a field experiment in which deer density was manipulated at three fenced sites: a deer enclosure (Deer-enclosed site); a deer enclosure where deer had been present until 2015 and only indirect effects remained (Indirect effect site); and a deer exclosure in place since 2004 (Deer-exclosed site). Density of questing nymphs and the prevalence of infection with Rickettsia sp. 1 in questing nymphs at each site were compared from 2018 to 2020. The nymph density at the Deer-exclosed site did not significantly differ from that at the Indirect effect site, suggesting that the deer herbivory did not affect the nymph density by reducing vegetation and increasing the abundance of other host mammals. However, the prevalence of infection with Rickettsia sp. 1 in questing nymphs was higher at the Deer-exclosed site than at the Deer-enclosed site, possibly because ticks utilized alternative hosts when deer were absent. The difference in Rickettsia sp. 1 prevalence between the Indirect effect and Deer-exclosed sites was comparable to that between the Indirect effect and Deer-enclosed sites, indicating that the indirect effects of deer were as strong as the direct effects. Examining the indirect effects of ecosystem engineers in the study of tick-borne diseases may be more important than previously recognized.

Patch and matrix characteristics determine the outcome of ecosystem engineering by mole rats in dry grasslands

Background

Burrowing mammals are important ecosystem engineers, especially in open ecosystems where they create patches that differ from the surrounding matrix in their structure or ecosystem functions.

Methods

We evaluated the fine-scale effects of a subterranean ecosystem engineer, the Lesser blind mole rat on the vegetation composition of sandy dry grasslands in Hungary. In this model system we tested whether the characteristics of the patch (mound size) and the matrix (total vegetation cover in the undisturbed grassland) influence the structural and functional contrasts between the mounds and the undisturbed grasslands. We sampled the vegetation of 80 mounds and 80 undisturbed grassland plots in four sites, where we recorded the total vegetation cover, and the occurrence and cover of each vascular plant species. We used two proxies to characterise the patches (mounds) and the matrix (undisturbed grassland): we measured the perimeter of the mounds and estimated the total vegetation cover of the undisturbed grasslands. First, we compared the vegetation characteristics of the mounds and the surrounding grasslands with general linear models. Second, we characterised the contrasts between the mounds and the undisturbed grassland by relative response indices (RRIs) of the vegetation characteristics studied in the first step.

Results

Species composition of the vegetation of the mounds and undisturbed grasslands was well separated in three out of the four study sites. Mounds were characterised by lower vegetation cover, lower cover of perennial graminoids, and higher diversity, and evenness compared to undisturbed grasslands. The contrast in vegetation cover between mounds and undisturbed grasslands increased with decreasing patch size. Increasing vegetation cover in the matrix grasslands increased the contrasts between the mounds and undisturbed grasslands in terms of total cover, perennial graminoid cover, diversity, and evenness. Our results suggest that mole rat mounds provide improved establishment conditions for subordinate species, because they are larger than other types of natural gaps and are characterised by less intense belowground competition. The ecosystem engineering effect, i.e., the contrast between the patches and the matrix was the largest in the more closed grasslands.

Microplastics, both non-biodegradable and biodegradable, do not affect the whole organism functioning of a marine mussel

Microplastics are ubiquitous in the marine environment, and their uptake by many organisms has been well documented. Concern about increasing plastic waste in ecosystems and organisms has led to the production of biodegradable alternatives. However, long breakdown times of biodegradable plastics in natural environments mean they still have the potential to induce ecological impacts. The impacts of microplastics on organisms remain unclear, especially as many experimental microplastic exposures employ particle concentrations orders of magnitude greater than those found in natural ecosystems. Here, we exposed the ecosystem engineer, the Asian green mussel Perna viridis, to non-biodegradable and biodegradable microplastics at two environmentally relevant concentrations (~17-20 particles L^-1 and ~ 135-140 particles L^-1). After four weeks of exposure, there were no significant effects of microplastic type or concentration on the mortality, oxygen consumption rate, clearance rate, or condition index of P. viridis. With the increasing body of microplastic literature, future exposure studies considering biotic effects should make efforts to employ environmentally relevant concentrations. Further, we suggest that, while a high-profile threat to ecosystems, investigating the effects of microplastics on ecosystems should be conducted alongside, and not draw focus away from, other major threats such as climate change.

Non-native species change the tune of tundra soils: Novel access to soundscapes of the Arctic earthworm invasion

Over the last decade, an increasing number of studies have used soundscapes to address diverse ecological questions. Sound represents one of the few sources of information capable of providing in situ insights into processes occurring within opaque soil matrices. To date, the use of soundscapes for soil macrofauna monitoring has been experimentally tested only in controlled laboratory environments. Here we assess the validity of laboratory predictions and explore the use of soil soundscape proxies for monitoring soil macrofauna (i.e., earthworm) activities in an outdoor context. In a common garden experiment in northern Sweden, we constructed outdoor mesocosm plots (N = 36) containing two different Arctic vegetation types (meadow and heath) and introduced earthworms to half of these plots. Earthworms substantially altered the ambient soil soundscape under both vegetation types, as measured by both traditional soundscape indices and frequency band power levels, although their acoustic impacts were expressed differently in heath versus meadow soils. While these findings support the as-of-yet untapped promise of using belowground soundscape analyses to monitor soil ecosystem health, direct acoustic emissions from earthworm activities appear to be an unlikely proxy for tracking worm activities at daily timescales. Instead, earthworms indirectly altered the soil soundscape by 're-engineering' the soil matrix: an effect that was dependent on vegetation type. Our findings suggest that long-term (i.e., seasonal) earthworm activities in natural soil settings can likely be monitored indirectly via their impacts on soundscape measures and acoustic indices. Analyzing soil soundscapes may enable larger-scale monitoring of high-latitude soils and is directly applicable to the specific case of earthworm invasions within Arctic soils, which has recently been identified as a potential threat to the resilience of high-latitude ecosystems. Soil soundscapes could also offer a novel means to monitor soils and soil-plant-faunal interactions in situ across diverse pedogenic, agronomic, and ecological systems.

Macroinvertebrates as engineers for bioturbation in freshwater ecosystem

Bioturbation is recognized as a deterministic process that sustains the physicochemical properties of the freshwater ecosystem. Irrigation, ventilation, and particle reworking activities made by biotic components on sediment beds influence the flow of nutrients and transport of particles in the sediment-water interface. Thus, the biogenic disturbances in sediment are acknowledged as pivotal mechanism nutrient cycling in the aquatic system. The macroinvertebrates of diverse taxonomic identity qualify as potent bioturbators due to their abundance and activities in the freshwater. Of particular relevance are the bioturbation activities by the sediment-dwelling biota, which introduce changes in both sediment and water profile. Multiple outcomes of the macroinvertebrate-mediated bioturbation are recognized in the form of modified sediment architecture, changed redox potential in the sediment-water interface, and elicited nutrient fluxes. The physical movement and physiological activities of benthic macroinvertebrates influence organic deposition in sediment and remobilize sediment-bound pollutants and heavy metals, as well as community composition of microbes. As ecosystem engineers, the benthic macroinvertebrates execute multiple functional roles through bioturbation that facilitate maintaining the freshwater as self-sustaining and self-stabilizing system. The likely consequences of bioturbation on the freshwater ecosystems facilitated by various macroinvertebrates - the ecosystem engineers. Among the macroinvertebrates, varied species of molluscs, insects, and annelids are the key facilitators for the movement of the nutrients and shaping of the sediment of the freshwater ecosystem.

A global review of beaver dam impacts: Stream conservation implications across biomes

Beaver are recolonizing previously occupied regions, expanding into new territories, and increasingly being introduced and protected for stream conservation and restoration across numerous biomes. However, beaver dam effects on the physical, chemical, and biological characteristics of streams may vary within and among biomes. A comprehensive review of these impacts is lacking. The goals of this review were to: 1) summarize the distribution of studies by biome on beaver dam effects related to channel morphology, hydrology, water quality, and aquatic biota, as well as on beaver habitat selection, 2) summarize the extent to which beaver dam impacts have been consistent within and among biomes, and 3) share testable hypotheses regarding beaver impacts within understudied biomes. We quantify the directionality of beaver dam impacts from 267 peer-reviewed studies. Results show that the majority of studies have been completed within temperate forest environments and that many biomes are understudied. Across biomes, beaver preferred sites for dam development characterized by relatively low gradients and unconfined reaches with small drainage areas. Overall, parameters related to stream morphology and hydrology showed relatively consistent responses to beaver dams within and among biomes, yet water quality and biotic responses were variable among biomes. Responses also varied by parameter within water quality and biotic impact categories. The findings of this study can be useful for stream conservation and restoration efforts that introduce or protect beaver. Additional studies are needed within arid and cold biomes historically occupied by beaver and in novel biomes where beaver populations are currently expanding.

Diversity patterns of cushion plants on the Qinghai-Tibet Plateau: A basic study for future conservation efforts on alpine ecosystems

The Qinghai-Tibet Plateau (QTP) is an important cushion plant hotspot. However, the distribution of cushion plants on the QTP is unknown, as are the factors that drive cushion plant distribution, limiting our understanding of the evolution of cushion species in the region. In this study, we assessed spatial patterns of total cushion plant diversity (including taxonomic and phylogenetic) over the entire QTP and compared patterns of diversity of cushion plants with different typologies (i.e., compact vs. loose). We also examined how these patterns were related to climatic features. Our results indicate that the southern QTP hosts the highest total cushion plant richness, especially in the south-central Hengduan Mountains subregion. The total number of cushion species declines from south to north and from southeast to northwest. Compact cushion plants exhibit similar patterns as the total cushion plant richness, whereas loose cushion plants show random distribution. Cushion plant phylogenetic diversity showed a similar pattern as that of the total cushion plant richness. In addition, cushion plant phylogenetic community structure was clustered in the eastern and southwestern QTP, whereas random or overdispersed in other areas. Climatic features represented by annual energy and water trends, seasonality and extreme environmental factors, had significant effects on cushion plant diversity patterns but limited effects on the phylogenetic community structure, suggesting that climatic features indeed promote the formation of cushion plants. Because cushion plants play vital roles in alpine ecosystems, our findings not only promote our understanding of the evolution and formation of alpine cushion plant diversity but also provide an indispensable foundation for future studies on cushion plant functions and thus alpine ecosystem sustainability in the entire QTP region.

Galapagos land iguanas as ecosystem engineers

BACKGROUND

Declines of large-bodied herbivorous reptiles are well documented, but the consequences for ecosystem function are not. Understanding how large-bodied herbivorous reptiles engineer ecosystems is relevant given the current interest in restoration of tropical islands where extinction rates are disproportionately high and reptiles are prominent as herbivores.

METHODS

In this study, we measured the ecosystem-level outcomes of long-term quasi-experiment represented by two adjacent islands within the Galapagos Archipelago, one with and the other without Galapagos land iguanas (Conolophus subcristatus), large-bodied herbivores known to feed on many plant species. We characterized plant communities on each island by developing high-resolution (<1 cm²) aerial imagery and delineating extent of plant associations and counting individual plants on each.

RESULTS

In the presence of iguanas there was dramatically less woody plant cover, more area with seasonal grasses, and many fewer cacti. Cacti had a more clumped distribution where iguanas were absent than where iguanas were present.

DISCUSSION

This study provided strong evidence that Galapagos land iguanas can substantially engineer the structure of terrestrial plant communities; therefore, restoration of large-bodied reptilian herbivores, such as land iguanas and giant tortoises, should be regarded as an important component of overall ecosystem restoration, especially for tropical islands from which they have been extirpated.

Biogeomorphological eco-evolutionary feedback between life and geomorphology: a theoretical framework using fossorial mammals

Engineer organisms not only adapt to pre-existing environmental conditions but also co-construct their physical environment. By doing so, they can subsequently change selection pressures for themselves and other species, as well as change community and ecosystem structures and functions. Focusing on one representative example, i.e., fossorial mammals, we show that geomorphological Earth system components are crucial for understanding and quantifying links between evolutionary and ecosystem dynamics and that feedbacks between geomorphology and engineer organisms constitute a major driver of geomorphological organization on the Earth's surface. We propose a biogeomorphological eco-evolutionary feedback synthesis from the gene to the landscape where eco-evolutionary feedbacks are mediated by the geomorphological dimensions of a niche that are affected by engineer organisms, such as fossorial mammals. Our concept encompasses (i) the initial responses of fossorial mammals to environmental constraints that enhance the evolution of their morphological and biomechanical traits for digging in the soil; (ii) specific adaptations of engineer fossorial mammals (morphological, biomechanical, physiological and behavioural feedback traits for living in burrows) to their constructed geomorphological environment; and (iii) ecological and evolutionary feedbacks diffusing at the community and ecological levels. Such a new perspective in geomorphology may lead to a better conceptualization and analysis of Earth surface processes and landforms as parts of complex adaptive systems in which Darwinian selection processes at lower landscape levels lead to self-organization of higher-level landforms and landscapes.

Linking Bacterial Communities Associated with the Environment and the Ecosystem Engineer Orchestia gammarellus at Contrasting Salt Marsh Elevations

The digestive tract of animals harbors microbiota important for the host's fitness and performance. The interaction between digestive tract bacteria and soil animal hosts is still poorly explored despite the importance of soil fauna for ecosystem processes. In this study, we investigated the interactions between the bacterial communities from the digestive tract of the litter-feeding, semi-terrestrial crustacean Orchestia gammarellus and those obtained from the environment; these organisms thrive in, i.e., soil and plant litter from salt marshes. We hypothesized that elevation is an important driver of soil and litter bacterial communities, which indirectly (via ingested soil and litter bacteria) influences the bacterial communities in the digestive tract of O. gammarellus. Indeed, our results revealed that elevation modulated soil and litter bacterial community composition along with soil organic matter content and the C:N ratio. Soil and plant litter differed in alpha diversity indexes (richness and diversity), and in the case of plant litter, both indexes increased with elevation. In contrast, elevation did not affect the composition of bacterial communities associated with O. gammarellus' digestive tract, suggesting selection by the host, despite the fact that a large component of the bacterial community was also detected in external sources. Importantly, Ca. Bacilloplasma and Vibrio were highly prevalent and abundant in the host. The taxonomic comparison of Ca. Bacilloplasma amplicon sequence variants across the host at different elevations suggested a phylogenetic divergence due to host habitat (i.e., marine or semi-terrestrial), thus supporting their potential functional role in the animal physiology. Our study sheds light on the influence of the environment on soil animal-bacteria interactions and provides insights into the resilience of the O. gammarellus-associated bacteria to increased flooding frequency.

Spatial-temporal variability of Mytilus galloprovincialis Lamarck 1819 populations and their accumulated sediment in northern Portugal

Mytilus galloprovincialis is an ecosystem engineer that provides habitat and generates environmental heterogeneity, increasing local biodiversity. Moreover, it is an economically important species representing 14% of the global production of marine bivalves. Natural drivers and the increase of anthropogenic pressures, such as sediment stress, influence its populations on rocky shores. The objective of this study was to explore the spatial-temporal patterns of different M. galloprovincialis attributes along the north of Portugal. For that purpose, six rocky shores were selected and sampled six times along the year 2019. The percentage of cover, density, spat density, condition index, clump thickness, size classes and clump sediment content were considered. Results showed the lack of seasonality in M. galloprovincialis along the north coast of Portugal. However, density, spat stage, clump thickness, condition index and size classes showed some variability among dates and shores. The percentage cover and sediment content only significantly differed among shores. Our results indicated an absence of seasonality for all the studied variables, probably because temperature was always within the optimum range for this species and the abundance of food supply in the study area independently of the season. The accumulated sediment on mussel clumps did not show any temporal variability with only significant differences among shores. The accumulated sediment was composed mainly by medium and coarse sand and it was correlated with mussel average size, condition index, but especially with the mussel clump thickness.

Fucus vesiculosus populations on artificial structures have potentially reduced fecundity and are dislodged at greater rates than on natural shores

Artificial structures are widespread features of coastal marine environments. These structures, however, are poor surrogates of natural rocky shores, meaning they generally support depauperate assemblages with reduced population sizes. Little is known about sub-lethal effects of such structures, for example, in terms of demographic properties and reproductive potential that may affect the dynamics and long-term viability of populations. Such understanding is particularly important for ecosystem engineer species, such as the intertidal seaweed Fucus vesiculosus. In this study, F. vesiculosus was sampled on eight artificial structures and eight natural shores along the east coast of Ireland and the west coast of Wales. Algal percentage cover, biomass, density of individuals, and growth rate did not differ between artificial and natural shores. Growth and reproductive cycles were consistent with previous studies for this species. While there was considerable variation from site to site, on average, populations on natural shores produced a higher number of mature receptacles during the peak reproductive period in April, and lower rates of dislodgement than on artificial structures. As F. vesiculosus reach peak reproductive output after 24 months, this suggests that individuals may be removed from populations on artificial structures before reaching their full reproductive potential. In this case, this did not influence density, percentage cover, or biomass, which suggests that F. vesiculosus populations on artificial structures may function similarly to those on natural shores if supported by suitable source populations, but potentially may not persist otherwise.

Artificial light at night may increase the predation pressure in a salt marsh keystone species

Artificial light at night (ALAN) has the potential to alter ecological processes such as the natural dynamics of predator-prey interactions. Although understanding of ALAN effect on faunal groups has increased in recent years, few studies have explicitly tested for direct consequences of ALAN on predator-prey systems. Here, we evaluated the effect of ALAN on juvenile mortality due to cannibalism and general predation of the South American intertidal burrowing crab Neohelice granulata, a key ecosystem engineer of salt marshes. For this, we conducted tethering and crab enclosure experiments for both night and day periods during successive tidal floods in a semidiurnal tidal regime. Both experimental approaches were deployed simultaneously in the field and they lasted four consecutive days during new moon nights. ALAN was simulated by a white LED lamp (30W) with a solar panel as a source of power in five separated areas selected as replicates. For general predation, juvenile survival under ALAN was 44% lower than during the daytime and 61% lower than under natural dark conditions. For cannibalism, juvenile survival under ALAN and during the daytime was similar and about 30% lower than under natural dark conditions. We also found that the abundance of adult male crabs (cannibals) under ALAN was nearly five times higher than at natural dark conditions. Our field experiments provide evidence that ALAN can increase the mortality of juvenile crabs and is at least partially driven by cannibalistic interactions.

Biological and physicochemical properties of the nests of White Stork Ciconia ciconia reveal soil entirely formed, modified and maintained by birds

The physiological and behavioural activities of animals have far-reaching impacts on the characteristics and functioning of soil. This includes vertebrates, which are capable of modifying the physicochemical and biochemical properties of soil. To date, however, no species is known to be responsible for the entire process of soil formation, modification and maintenance. Large-bodied birds build nests which they then use for several years or even decades. During nest construction or renovation, birds gather and transport to the nesting site organic and mineral matter that includes tree branches of various sizes, twigs, turf, straw and hay. Over time, during subsequent breeding events, adult birds supply further loads of organic matter to the nest, such as food remains, excrement, pellets, feathers, egg shells and other materials. Taking the White Stork Ciconia ciconia as an example, we have shown that the materials deposited in the nests of large-bodied birds gradually produce ornithogenic soils over the years, with distinguishable layers having different physicochemical characteristics and biochemical activities. The tested nesting substrate met the criteria for ornithogenic material; the layers had appropriate thickness and phosphorus pentoxide (P₂O₅) content. Results of the study indicates that the material contained in White Stork nests have the characteristics of Histosols. Moreover, such nests harbour assemblages of fungi and arthropods that contain species typical of soil mycobiota and fauna, respectively. This study is the first to describe a soil that is formed, modified and maintained entirely by vertebrates and is physically isolated from the ground. Our results highlight the fact that the nests of large birds are unique structures in ecosystems and provide a habitat for a rich and diverse assemblage of organisms.

Carbon storage and sediment trapping by Egeria densa Planch., a globally invasive, freshwater macrophyte

Invasive plants have long been recognized for altering ecosystem properties, but their long-term impacts on ecosystem processes remain largely unknown. In this study, we determined the impact of Egeria densa Planch, a globally invasive freshwater macrophyte, on sedimentation processes in a large tidal freshwater region. We measured carbon accumulation (CARs) and inorganic sedimentation rates in submerged aquatic vegetation SAV dominated by E. densa and compared these rates to those of adjacent tidal freshwater marshes. Study sites were chosen along a range of hydrodynamic conditions in the Sacramento-San Joaquin Delta of California, USA, where E. densa has been widespread since 1990. Cores were analyzed for bulk density, % inorganic matter, % organic carbon, ²¹⁰Pb, and ¹³⁷Cs. Our results show that E. densa patches constitute sinks for both "blue carbon" and inorganic sediment. Compared to marshes, E. densa patches have greater inorganic sedimentation rates (E. densa: 1103-5989 g m^-2 yr^-1, marsh: 393-1001 g m^-2 yr^-1, p < 0.01) and vertical accretion rates (E. densa: 0.4-1.3 cm yr^-1, marsh: 0.3-0.5 cm yr^-1, p < 0.05), but similar CARs (E. densa: 59-242 g C m^-2 yr^-1, marsh: 109-169 g C m^-2 yr^-1, p > 0.05). Sediment stored by E. densa likely reduces the resilience of adjacent marshes by depleting the sediment available for marsh-building. Because of its harmful traits, E. densa is not a suitable candidate for mitigating carbon pollution; however, currently invaded habitats may already contain a meaningful component of regional carbon budgets. Our results strongly suggest that E. densa patches are sinks for carbon and inorganic sediment throughout its global range, raising questions about how invasive SAV is altering biogeochemical cycling and sediment dynamics across freshwater ecosystems.

Evidence of surplus carrying capacity for benthic invertebrates with the poleward range extension of the tropical seagrass Halophila decipiens in SE Brazil

Seagrasses may enhance the abundance and diversity of benthic invertebrates through trophic facilitation. We investigated this potential ecological function for two seagrasses in SE Brazil: Halodule emarginata, a native species, and Halophila decipiens, a tropical seagrass recently established in the region. At Halophila sites, the organic matter (or carbon) in sediments decreased steadily from seagrass patches to isolated bare grounds, indicating surplus primary production. This was not observed at Halodule sites. At one of the two Halophila sites, localized trophic enrichment was also consistently linked to increased invertebrate abundance within patches, chiefly through increased carrying capacity of small mesoherbivores. Rather than spillover, edge effects were observed at bordering bare habitats, where polychaete predators were abundant. The transition from seagrass edges to isolated bare habitats was marked by an increase of the density of sipunculid worms. The current spread of Halophila may thus change the spatial distribution of benthic ecological functions.

Linking multiple facets of biodiversity and ecosystem functions in a coastal reef habitat

Reef-building species play key roles in promoting local species richness and regulating ecosystem functions like biogeochemical fluxes. We evaluated the functioning of a habitat engineered by the reef-building polychaete Sabellaria alveolata, by measuring oxygen and nutrient fluxes in the reef structures and in the soft-sediments nearby. Then, we investigated the relative importance of temperature, the engineer S. alveolata, and different facets of macrofauna diversity (taxonomic, functional diversity and identity), on the reef biogeochemical fluxes using multiple linear regressions and effect sizes. The reef fluxes were more intense than the soft-sediment fluxes and mainly driven by the engineer biomass and abundance, stressing the importance of these biogenic structures. Higher water temperatures and an intermediate level of associated macrofauna functional dispersion weighted only by abundance (i.e. intermediate biological trait variability) maximized the reef's global biogeochemical functioning. Ultimately, the physical degradation of the reefs could lead to lower levels of functioning.

Coralline macroalgae contribution to ecological services of carbon storage in a disturbed seagrass meadow

Coralline macroalgae are globally distributed rhodopyhtes that remove carbon from their immediate environment and transform it into carbonate sediments through the senescence of their calcified tissues. In this study, the calcium carbonate (CaCO₃) stocks in the tissue of Jania adhaerens and sediments in Tanjung Adang Shoal, Johor were quantified for a 13-month study period. The detailed maps of the geographical distribution based on the spatial and temporal variations of biomass and CaCO₃ were also assessed. The highest amount of biomass, CaCO₃ and organic carbon (OC) stocks in the tissues showed the highest in May 2018 and May 2019. The biomass values ranged from 65 to 143 g DW m^-2, which contained 53-147 g CaCO₃ m^-2 and 3-11 g OC m^-2. These findings provided insights into the biogeochemical cycling of these inputs, which can be used to estimate the overall carbon budget of the macrophyte meadow.

Impacts of pollution, sex, and tide on the time allocations to behaviours of Uca arcuata in mangroves

Fiddler crabs (Uca) are ecosystem engineers in coastal ecosystems. Many anthropogenic and natural factors can affect the time allocated to various behaviours in Uca. However, the behaviour of U. arcuata, a widely distributed fiddler crab in Asia, has not been studied in mainland China. Here, we used binoculars to record the time budget of ten behaviours of U. arcuata to investigate the potential effects of sex, tides, and pollution on these behaviours. We found that the crabs spent 42.3%, 27.0%, and 10.6% of their time on feeding, feeding while walking, and stationary respectively. The crabs spent <1.5% of their time on copulation and grooming. The total foraging time (feeding + feeding while walking) did not differ among the three polluted sites. However, crabs spent more time on feeding but less time on feeding while walking. The feeding rate and probability of burrowing and grooming decreased while the possibility of locomotion and stay in burrow increased with increasing nutrient concentration. Females spent 13.9% more time on feeding and fed 54.9% faster than males. Males had a higher tendency to grooming and combat while they were less likely to walk than females. Regarding to the influence of tide, fiddler crabs fed 11.2% faster at ebb tides than at flood tides, and they were more likely to walk and stay in burrows at flood tides than at ebb tides. Our results indicated that nutrient pollution had stronger impacts on the behaviours of crabs than sex and tide. In polluted mangroves, increasing nutrient concentration reduced the quantity of sediment processed by fiddler crabs due to their smaller feeding area, slower feeding rate, and reduced frequency of burrowing activities. These results imply that mitigating nutrient pollution in mangroves may benefit the restoration and management of coastal ecosystems through the enhanced engineering functions of fiddler crabs.

Pushing the Boundaries: Models for the Spatial Spread of Ecosystem Engineers

Ecosystems engineers are species that can substantially alter their abiotic environment and thereby enhance their population growth. The net growth rate of obligate engineers is even negative unless they modify the environment. We derive and analyze a model for the spread and invasion of such species. Prior to engineering, the landscape consists of unsuitable habitat; after engineering, the habitat is suitable. The boundary between the two types of habitat is moved by the species through their engineering activity. Our model is a novel type of a reaction-diffusion free boundary problem. We prove the existence of traveling waves and give upper and lower bounds for their speeds. We illustrate how the speed depends on individual movement and engineering behavior near the boundary.

Host plasticity supports spread of an aquaculture introduced virus to an ecosystem engineer

BACKGROUND

The common cockle Cerastoderma edule plays an important ecological role in the marine ecosystem both as an infaunal engineer (reef forming and bioturbation) and a food source for protected bird species in its European range. Cockle beds are found in close proximity to aquaculture and fisheries operations, which can be "hot spots" for infectious agents including viruses and bacteria. Ostreid herpesvirus-1 microVar (OsHV-1 μVar) has spread to many Pacific oyster Crassostrea gigas culture sites globally, where it has been associated with significant mortalities in this cultured bivalve. Knowledge on the impact of the virus on the wider ecosystem, is limited. As the likelihood of released virus dispersing into the wider aquatic ecosystem is high, the plasticity of the virus and the susceptibility of C. edule to act as hosts or carriers is unknown.

METHODS

In this study, wild C. edule were sampled biweekly at two C. gigas culture sites over a four-month period during the summer when OsHV-1 μVar prevalence is at its highest in oysters. C. edule were screened for the virus molecularly (PCR, qPCR and Sanger sequencing) and visually (in situ hybridisation (ISH)). The cockle's ability to act as a carrier and transmit OsHV-1 μVar to the oyster host at a temperature of 14 ℃, when the virus is considered to be dormant until water temperatures exceed 16 ℃, was also assessed in laboratory transmission trials.

RESULTS

The results demonstrated that OsHV-1 μVar was detected in all C. edule size/age cohorts, at both culture sites. In the laboratory, viral transmission was effected from cockles to naïve oysters for the first time, five days post-exposure. The laboratory study also demonstrated that OsHV-1 μVar was active and was successfully transmitted from the C. edule at lower temperatures.

CONCLUSIONS

This study demonstrates that OsHV-1 μVar has the plasticity to infect the keystone species C. edule and highlights the possible trophic transmission of the virus from cockles to their mobile top predators. This scenario would have important implications, as a greater geographical range expansion of this significant pathogen via migratory bird species may have an impact on other species that reside in bird habitats most of which are special areas of conservation.

Metals retention in a net alkaline mine drainage impacted stream due to the colonization of the North American Beaver (Castor canadensis)

This study investigated two aspects of Castor canadensis (North American Beaver) colonization on a net alkaline mine drainage impacted tributary to Tar Creek (Ottawa County, OK, USA). Specifically, the retention of metals due to the presence of beaver dams, and metals contamination of sediments due to long-term loading, were examined. The Unnamed Tributary (UT) has been impacted by two mine drainage sources since at least 1979, with Cd, Fe, Pb, and Zn being the primary metals of concern. This study was conducted along a 1.6 km reach of the stream. The presence of beaver was noted in the UT in 2013, and by the end of 2014, the majority of the UT had been transformed into a series of six to eight wetlands constructed by beaver. The study found the presence of beaver impoundments resulted in a decrease in aqueous Fe and Cd concentrations, with minimal influence on Pb concentrations. The most upstream beaver pond, impounding waters with the greatest initial metals concentrations, had mean Fe and Cd removal efficiencies of 57% and 63%, respectively. Utilizing geomorphic data collected during rapid habitat assessments, this beaver pond had an approximate surface area and hydraulic retention time of 3000 m² and 70 h, respectively, resulting in a mean Fe removal rate of 4.12 g m^-2 day^-1 of Fe. The sediments collected from the UT contained elevated Cd, Pb, and Zn concentrations, with many of the metals concentrations greater than five times the EPA site-specific probable effect concentrations for sediment toxicity (Cd: 11.1 mg/kg, Pb: 150 mg/kg, and Zn: 2083 mg/kg). Five sediment samples contained Fe concentrations exceeding 200,000 mg/kg. Overall, this study emphasizes the ability of beaver to modify their surroundings and the potentially important role of beaver dams to help retain metals from untreated mine drainage impacted streams.

Revealing hydrogen peroxide as an external stressor in macrophyte-dominated coastal ecosystems

Benthic primary producers in coastal ecosystems provide important habitat for marine organisms through the provision of complex 3D habitat. Primary producers produce organic matter, while simultaneously producing reactive oxygen species, including hydrogen peroxide (H2O2), a driver of oxidative stress. Through their high biomass, productivity and effect on local hydrodynamics, benthic primary producers can potentially increase H2O2 concentrations surrounding the biogenic structures they form. The aim of this study was to identify the potential role of H2O2 produced by benthic primary producers as an external stressor in coastal ecosystems. This was achieved by measuring H2O2 concentrations within sea lettuce blooms (Ulva sp.), giant kelp forests (Macrocystis pyrifera), and seagrass meadows (Zostera muelleri); quantifying H2O2 production rates of these species; and testing heterotrophic bacterial response to relevant H2O2 concentrations. Ulva sp. produced five times more H2O2 than other species. At in situ concentrations, H2O2 inhibited bacterial production and carbon flow through the microbial loop by 75%. This study reveals H2O2 as an additional stressor in bloom-forming Ulva sp. with higher H2O2 production compared to the ecosystem engineers M. pyrifera and Z. muelleri. H2O2 production by benthic primary producers can affect carbon flow through the microbial loop, with the potential to propagate a stress signal up the food web.

Ecosystem services provided by a non-cultured shellfish species: The common cockle Cerastoderma edule

Coastal habitats provide many important ecosystem services. The substantial role of shellfish in delivering ecosystem services is increasingly recognised, usually with a focus on cultured species, but wild-harvested bivalve species have largely been ignored. This study aimed to collate evidence and data to demonstrate the substantial role played by Europe's main wild-harvested bivalve species, the common cockle Cerastoderma edule, and to assess the ecosystem services that cockles provide. Data and information are synthesised from five countries along the Atlantic European coast with a long history of cockle fisheries. The cockle helps to modify habitat and support biodiversity, and plays a key role in the supporting services on which many of the other services depend. As well as providing food for people, cockles remove nitrogen, phosphorus and carbon from the marine environment, and have a strong cultural influence in these countries along the Atlantic coast. Preliminary economic valuation of some of these services in a European context is provided, and key knowledge gaps identified. It is concluded that the cockle has the potential to become (i) an important focus of conservation and improved sustainable management practices in coastal areas and communities, and (ii) a suitable model species to study the integration of cultural ecosystem services within the broader application of 'ecosystem services'.

Shrub facilitation promotes selective tree establishment beyond the climatic treeline

The alpine treeline is shifting upward due to climate warming. However, the treeline species composition and the pace of its upward migration can be mediated by ecological interactions. In particular, so-called ecosystem engineers, i.e. species that modulate the microscale environmental conditions, at the treeline may play a crucial role. We conducted a three-year seedling transplant experiment at the alpine treeline ecotone in southwest China to study how the shrub Rhododendron rupicola modifies the microscale physical and biotic environments and thus influences the establishment and performance of the two treeline species Larix potaninii and Picea likiangensis. Seedlings were transplanted to the current timberline and treeline, as well as above the current treeline in order to determine the responses of the two tree species to the shrub with respect to the current tree distribution. R. rupicola modified the microenvironment by increasing soil moisture and nutrient contents, buffering soil temperature fluctuations, and by increasing richness and changing the composition of root-associated fungi. As a result, tree seedlings planted under shrubs had significantly higher survival, growth rates and nutrient accumulations than those planted in open ground. Furthermore, seedlings planted at lower elevations performed better than those planted at higher elevations. Beyond the treeline, seedling survival was very low on open ground but strongly facilitated by the shrub. Finally, facilitation effects were species-specific, with Larix benefitting more from the shrub than Picea, while Picea had less mortality than Larix in the absence of the shrub. This study demonstrates that shrubs, through the amelioration of physical and biotic microenvironmental conditions, can act as stepping stones for the establishment of selective tree species beyond the current treeline. This suggests that biotic interactions can strongly modify the treeline species composition and push the treeline beyond its current climatic limits, thereby facilitating the upward shift with ongoing climate warming.

Can an herbivore affect where a top predator kills its prey by modifying woody vegetation structure?

In large mammal communities, little is known about modification of interspecific interactions through habitat structure changes. We assessed the effects of African elephants (Loxodonta africana) on features of woody habitat structure that can affect predator-prey interactions. We then explored how this can influence where African lions (Panthera leo) kill their prey. Indeed, lions are stalk-and-ambush predators and habitat structure and concealment opportunities are assumed to influence their hunting success. During 2 years, in Hwange National Park, Zimbabwe, kill sites (n = 167) of GPS-collared lions were characterized (visibility distance for large mammals, distance to a potential ambush site and presence of elephant impacts). We compared characteristics of lion kill sites with characteristics of random sites (1) at a large scale (i.e. in areas intensively used by lions, n = 418) and (2) at the microhabitat scale (i.e. in the direct surrounding available habitat, < 150 m, n = 167). Elephant-impacted sites had a slightly higher visibility and a longer distance to a potential ambush site than non-impacted sites, but these relationships were characterized by a high variability. At large scale, kill sites were characterized by higher levels of elephant impacts compared to random sites. At microhabitat scale, compared to the direct nearby available habitat, kill sites were characterized by a reduced distance to a potential ambush site. We suggest a conceptual framework whereby the relative importance of habitat features and prey abundance could change upon the scale considered.

Phragmites australis meets Suaeda salsa on the "red beach": Effects of an ecosystem engineer on salt-marsh litter decomposition

Suaeda salsa is a pioneer species in coastal wetlands of East Asia and recently an ecosystem engineer species, Phragmites australis, has started to enter into S. salsa communities owing to either autogenic or external drivers. The consequences of this phenomenon on the ecosystem functions of coastal wetlands are still unclear, especially for decomposition processes. Here we compared the decomposition rate of S. salsa litter, and associated litter chemistry dynamics, between sites with and without P. australis encroachment. We conducted a litter transplantation experiment to tease apart the effects of litter quality and decomposing environment or decomposer community composition. Our results showed that P. australis encroachment led to higher carbon and phosphorus losses of S. salsa litter, but equal losses of total mass, lignin, hemicellulose and nitrogen. Phragmites australis encroachment might affect decomposition rate indirectly by making S. salsa produce litter with higher lignin concentrations or via increasing the fungal diversity for decomposition. Moreover, P. australis as an ecosystem engineer might also alter the allocation of total phosphorus between the plants and the soils in coastal wetlands. Our findings indicate that P. australis could impact aboveground and belowground carbon and nutrient dynamics in coastal wetlands, and highlight the important consequences that encroaching plant species, especially ecosystem engineers, can have on ecosystem functions and services of coastal wetlands, not only in East Asia but probably also elsewhere in the world.

Decay and persistence of empty bivalve shells in a temperate riverine system

Bivalve shells can persist over a geological time, acting as important physical resources to the associated fauna. However, few studies have investigated their relevance as persistent long-term ecological attributes to the ecosystem. As such, it is relevant to investigate the shell decays in riverine systems subjected to different environmental conditions. Towards this end, shells of four bivalve species (Anodonta anatina, Corbicula fluminea, Potomida littoralis and Unio delphinus) were made available individually and in clusters of different sizes. The effects of river flow and seasonality were assessed by recording the decay rates of shells in lentic and lotic habitats throughout the year. Our results evidenced that the decays varied among species and depend on shell size, water flow and season. Thin shelled species (A. anatina and U. delphinus) showed the highest mean percentage of decay per month, 3.17% (lotic) and 2.77% (lotic), respectively, and thick shelled species (C. fluminea and P. littoralis) the lowest, 2.02% (lotic) and 1.83% (lotic), respectively. Size was a relevant variable explaining decays, with the smallest shells presenting the highest values, 1.2-2.0 times higher compared to the other size classes. Also, robustness showed to be the most relevant feature explaining the decays in thick shelled species. River flow was also a relevant descriptor of the decays, with higher decays observed in the lotic compared to the lentic habitats. Furthermore, lower decays were observed mainly during summer (lentic site), and autumn (lotic site) associated to the burial effect of leaves. In summary, shells of the native species A. anatina and U. delphinus are expected to persist and contribute less as habitat engineering species, than shells of the native P. littoralis and invasive C. fluminea species. This is especially valid to lotic habitats where the decays were up to 2.13 times higher than in lentic habitats.

Effects of digging by a native and introduced ecosystem engineer on soil physical and chemical properties in temperate grassy woodland

Temperate grasslands and woodlands are the focus of extensive restoration efforts worldwide. Reintroduction of locally extinct soil-foraging and burrowing animals has been suggested as a means to restore soil function in these ecosystems. Yet little is known about the physical and chemical effects of digging on soil over time and how these effects differ between species of digging animal, vegetation types or ecosystems. We compared foraging pits of a native reintroduced marsupial, the eastern bettong (Bettongia gaimardi) and that of the exotic European rabbit (Oryctolagus cuniculus). We simulated pits of these animals and measured pit dimensions and soil chemical properties over a period of 2 years. We showed that bettong and rabbit pits differed in their morphology and longevity, and that pits had a strong moderating effect on soil surface temperatures. Over 75% of the simulated pits were still visible after 2 years, and bettong pits infilled faster than rabbit pits. Bettong pits reduced diurnal temperature range by up to 25 °C compared to the soil surface. We did not find any effects of digging on soil chemistry that were consistent across vegetation types, between bettong and rabbit pits, and with time since digging, which is contrary to studies conducted in arid biomes. Our findings show that animal foraging pits in temperate ecosystems cause physical alteration of the soil surface and microclimatic conditions rather than nutrient changes often observed in arid areas.

The mechanisms by which oysters facilitate invertebrates vary across environmental gradients

The effective use of ecosystem engineers to conserve biodiversity requires an understanding of the types of resources an engineer modifies, and how these modifications vary with biotic and abiotic context. In the intertidal zone, oysters engineer ecological communities by reducing temperature and desiccation stress, enhancing the availability of hard substrate for attachment, and by ameliorating biological interactions such as competition and predation. Using a field experiment manipulating shading, predator access and availability of shell substrate at four sites distributed over 900 km of east Australian coastline, we investigated how the relative importance of these mechanisms of facilitation vary spatially. At all sites, and irrespective of environmental conditions, the provision of hard substrate by oysters enhanced the abundance and richness of invertebrates, in particular epibionts (barnacles and oyster spat) and grazing gastropods. Mobile arthropods utilised the habitat provided by disarticulated dead oysters more than live oyster habitat, whereas the abundance of polychaetes and bivalves were much greater in live oysters, suggesting the oyster filter-feeding activity is important for these groups. In warmer estuaries, shading by oysters had a larger effect on biodiversity, whereas in cooler estuaries, the provision of a predation refuge by oysters played a more important role. Such knowledge of how ecosystem engineering effects vary across environmental gradients can help inform management strategies targeting ecosystem resilience via the amelioration of specific environmental stressors, or conservation of specific community assemblages.

Stronger positive association between an invasive crab and a native intertidal ecosystem engineer with increasing wave exposure

Ecosystem engineers are predicted to have stronger facilitative effects when environmental stress is higher. Here we examined whether facilitation of the invasive porcelain crab Petrolisthes elongatus by the ecosystem engineering serpulid tube worm Galeolaria caespitosa increased with wave exposure. Petrolisthes occurs beneath intertidal boulders which often have a high cover of Galeolaria on their underside. Surveys across nine sites demonstrated Petrolisthes abundance beneath boulders increased with wave exposure and Galeolaria cover, although only when the habitat matrix beneath boulders was rock or mixed rock and sand. Moreover, as wave exposure increased, the strength of relationship between Petrolisthes abundance and the surface area of Galeolaria also increased. Experimentally, the presence of Galeolaria on the underside of boulders increased Petrolisthes abundance by 50% compared to boulders lacking Galeolaria. Our findings suggest the facilitative role of Galeolaria is stronger at more wave-exposed sites, which appears to contribute to a higher abundance of invasive Petrolisthes.

Do an ecosystem engineer and environmental gradient act independently or in concert to shape juvenile plant communities? Tests with the leaf-cutter ant Atta laevigata in a Neotropical savanna

Background

Ecosystem engineers are species that transform habitats in ways that influence other species.While the impacts of many engineers have been well described, our understanding of how their impact varies along environmental gradients remains limited. Although disentangling the effects of gradients and engineers on biodiversity is complicated-the gradients themselves can be altered by engineers-doing so is necessary to advance conceptual and mathematical models of ecosystem engineering. We used leaf-cutter ants (Atta spp.) to investigate the relative influence of gradients and environmental engineers on the abundance and species richness of woody plants.

Methods

We conducted our research in South America's Cerrado. With a survey of plant recruits along a canopy cover gradient, and data on environmental conditions that influence plant recruitment, we fit statistical models that addressed the following questions: (1) Does A. laevigata modify the gradient in canopy cover found in our Cerrado site? (2) Do environmental conditions that influence woody plant establishment in the Cerrado vary with canopy cover or proximity to A. laevigata nests? (3) Do A. laevigata and canopy cover act independently or in concert to influence recruit abundance and species richness?

Results

We found that environmental conditions previously shown to influence plant establishment in the Cerrado varied in concert with canopy cover, but that ants are not modifying the cover gradient or cover over nests. However, ants are modifying other local environmental conditions, and the magnitude and spatial extent of these changes are consistent across the gradient. In contrast to prior studies, we found that ant-related factors (e.g., proximity to nests, ant changes in surface conditions), rather than canopy cover, had the strongest effect on the abundance of plant recruits. However, the diversity of plants was influenced by both the engineer and the canopy cover gradient.

Discussion

Atta laevigata in the Cerrado modify local conditions in ways that have strong but spatially restricted consequences for plant communities. We hypothesize that ants indirectly reduce seedling establishment by clearing litter and reducing soil moisture, which leads to seed and seedling desiccation. Altering soil nutrients could also reduce juvenile growth and survivorship; if so these indirect negative effects of engineering could exacerbate their direct effects of harvesting plants. The effects of Atta appear restricted to nest mounds, but they could be long-lasting because mounds persist long after a colony has died or migrated. Our results support the hypothesis that leaf-cutter ants play a dominant role in Cerrado plant demography. We suggest the ecological and economic footprint of these engineers may increase dramatically in coming decades due to the transformation of the Cerrado by human activities.

The effects of elevated CO2 on shell properties and susceptibility to predation in mussels Mytilus edulis

For many species, ocean acidification (OA) is having negative physiological consequences on their fitness and resilience to environmental change, but less is known about the ecosystem effects of these changes. Here, we assess how OA conditions predicted for 2100 affects the biological functioning of an important habitat-forming species Mytilus edulis and its susceptibility to predation by a key predator, the gastropod Nucella lapillus. Change in three physiological parameters in Mytilus were assessed: (1) shell thickness and cross-sectional surface area, (2) body volume and (3) feeding rate, as well as susceptibility to predation by N. lapillus. Shell thickness and cross-section area, body volume and feeding rate of Mytilus all reduced under OA conditions indicating compromised fitness. Predation risk increased by ∼26% under OA, suggesting increased susceptibility of mussels to predation and/or altered predator foraging behaviour. Notably, predation of large Mytilus - that were largely free from predation under control conditions - increased by more than 8x under OA, suggesting that body size was no longer a refuge. Our results suggest OA will impact upon ecosystem structure and functioning and the continued provision of ecosystem services associated with Mytilus reefs and the communities associated with them.

On the crucial importance of a small bird: The ecosystem services of the little auk (Alle alle) population in Northwest Greenland in a long-term perspective

The little auk is the most numerous seabird in the North Atlantic and its most important breeding area is the eastern shores of the North Water polynya. Here, a population of an estimated 33 million pairs breeds in huge colonies and significantly shapes the ecosystem. Archaeological remains in the colonies document that the little auk has been harvested over millennia. Anthropological research discloses how the little auk has a role both as social engineer and as a significant resource for the Inughuit today. The hunting can be practiced without costly equipment, and has no gender and age discrimination in contrast to the dominant hunt for marine mammals. Little auks are ecological engineers in the sense that they transport vast amounts of nutrients from sea to land, where the nutrients are deposited as guano. Here, the fertilized vegetation provides important foraging opportunities for hares, geese, fox, reindeer, and the introduced muskox. We estimate that the relative muskox density is ten times higher within 1 km of little auk fertilized vegetation hotspots.

Mechanical properties of sediment determine burrowing success and influence distribution of two lugworm species

We apply new perspectives on how organisms burrow by examining the association of in situ variation in sediment mechanical properties with burrowing ability and species distribution of two sympatric lugworms, Abarenicola pacifica and Abarenicola claparedi We quantified the sediment's resistance to penetration and its grain size distribution at sites inhabited by each species. Abarenicola pacifica individuals were found in significantly harder to penetrate, more heterogeneous sediments. We compared worm burrowing ability using reciprocal transplant experiments. Worms from firmer sediments, A. pacifica, were able to make successful steep burrows in sediments characteristic of either species. In contrast, A. claparedi individuals often failed to complete successful burrows in the firmer A. pacifica sediment. To examine how morphological differences could explain these patterns, we compared body wall musculature and measured how well individuals support their own bodies when draped over a cantilever. Lugworms from the firmer sediment had thicker body wall musculature and held their bodies more rigidly than did worms from softer sediments. Additionally, we observed subtle differences in the papillae on the proboscises' surfaces, which could affect worm-sediment interactions, but we found no differences in the chaetae of the two species. Abarenicola claparedi produced more mucus, which could be important in shoring up burrow walls in their shifting, sandy habitat. This study presents the first example of using field-based experiments to determine how sediment mechanical properties and worm burrowing ability could act to determine organismal distribution. Our findings have broader ecological implications because of the role of lugworms as ecosystem engineers.

Reducing the data-deficiency of threatened European habitats: Spatial variation of sabellariid worm reefs and associated fauna in the Sicily Channel, Mediterranean Sea

Biogenic reefs, such as those produced by tube-dwelling polychaetes of the genus Sabellaria, are valuable marine habitats which are a focus of protection according to European legislation. The achievement of this goal is potentially hindered by the lack of essential empirical data, especially in the Mediterranean Sea. This study addresses some of the current knowledge gaps by quantifying and comparing multi-scale patterns of abundance and distribution of two habitat-forming species (Sabellaria alveolata and S. spinulosa) and their associated fauna along 190 km of coast on the Italian side of the Sicily Channel. While the abundance of the two sabellariids and the total number of associated taxa did not differ at any of the examined scales (from tens of centimetres to tens-100 of kilometres), the structure (composition in terms of both the identity and the relative abundance of constituting taxa) of the associated fauna and the abundance of several taxa (the polychaetes Eulalia ornata, Syllis pulvinata, S. garciai, Nereis splendida and Arabella iricolor, and the amphipods Apolochus neapolitanus, Tethylembos viguieri and Caprella acanthifera) varied among locations established ∼50-100 km apart. Syllis pulvinata also showed significant variation between sites (hundreds of metres apart), analogously to the other syllid polychaetes S. armillaris and S. gracilis, the nereidid polychaete Nereis rava, and the amphipod Gammaropsis ulrici. The largest variance of S. spinulosa, of the structure of the whole associated fauna and of 56% of taxa analysed individually occurred at the scale of replicates (metres apart), while that of the dominant bio-constructor S. alveolata and of 25% of taxa occurred at the scale of sites. The remaining 19% and the total richness of taxa showed the largest variance at the scale of locations. Present findings contribute to meet a crucial requirement of any future effective protection strategy, i.e., identifying relevant scales of variation to be included in protection schemes aiming at preserving representative samples not only of target habitats and organisms, but also of the processes driving such variability.

Alteration of hydrogeomorphic processes by invasive beavers in southern South America

The North American beaver (Castor canadensis) is an invasive species in southern Patagonia, introduced in 1946 as part of a program by the Argentine government to augment furbearers. Research focus has turned from inventorying the beaver's population and ecosystem impacts toward eradicating it from the region and restoring degraded areas. Successful restoration, however, requires a fuller determination of how beavers have altered physical landscape characteristics, and of what landscape features and biota need to be restored. Our goal was to identify changes to the physical landscape by invasive beaver. We analyzed channel and valley morphology in detail at one site in each of the three major forest zones occurring on the Argentine side of Tierra del Fuego's main island. We also assessed 48 additional sites across the three forest biomes on the island to identify a broader range of aquatic habitat occupied and modified by beaver. Beaver build dams with Nothofagus tree branches on streams, which triggered mineral sediment accretion processes in the riparian zone, but not in ways consistent with the beaver meadow theory and only at a few sites. At the majority of sites, beavers actively excavated peat and mineral sediment, moved thousands of cubic meters of sediment within their occupied landscapes and used it to build dams. Beaver were also common in fen ecosystems where pond formation inundated and drowned peat forming mosses and sedges, and triggered a massive invasion of exotic plant species. Results highlight that restoration of fen ecosystems is a previously unrecognized but pressing and challenging restoration need in addition to reforestation of Nothofagus riparian forests. We recommend that decision-makers include the full ecosystem diversity of the Fuegian landscape in their beaver eradiation and ecosystem restoration plans.

River bank burrowing by invasive crayfish: Spatial distribution, biophysical controls and biogeomorphic significance

Invasive species generate significant global environmental and economic costs and represent a particularly potent threat to freshwater systems. The biogeomorphic impacts of invasive aquatic and riparian species on river processes and landforms remain largely unquantified, but have the potential to generate significant sediment management issues within invaded catchments. Several species of invasive (non-native) crayfish are known to burrow into river banks and visual evidence of river bank damage is generating public concern and media attention. Despite this, there is a paucity of understanding of burrow distribution, biophysical controls and the potential significance of this problem beyond a small number of local studies at heavily impacted sites. This paper presents the first multi-catchment analysis of this phenomenon, combining existing data on biophysical river properties and invasive crayfish observations with purpose-designed field surveys across 103 river reaches to derive key trends. Crayfish burrows were observed on the majority of reaches, but burrowing tended to be patchy in spatial distribution, concentrated in a small proportion (<10%) of the length of rivers surveyed. Burrow distribution was better explained by local bank biophysical properties than by reach-scale properties, and burrowed banks were more likely to be characterised by cohesive bank material, steeper bank profiles with large areas of bare bank face, often on outer bend locations. Burrow excavation alone has delivered a considerable amount of sediment to invaded river systems in the surveyed sites (3tkm(-1) impacted bank) and this represents a minimum contribution and certainly an underestimate of the absolute yield (submerged burrows were not recorded). Furthermore, burrowing was associated with bank profiles that were either actively eroding or exposed to fluvial action and/or mass failure processes, providing the first quantitative evidence that invasive crayfish may cause or accelerate river bank instability and erosion in invaded catchments beyond the scale of individual burrows.

Sarcoptes scabiei infestation does not alter the stability of ectoparasite communities

Background

The host represents a heterogeneous ecosystem where multiple parasite species co-occur and interact with each other for space and resources. Although these interactions may rule the features of an infracommunity and may shape the infracommunity response to external perturbations, the resilience of ectoparasite communities to new infestations remains poorly explored.

Methods

We analysed the composition of the ectoparasite communities found on 214 individual Iberian ibexes (Capra pyrenaica) inhabiting the Sierra Nevada Natural Space, southern Spain. Using classification and regression trees, we explored how the presence of Sarcoptes scabiei (a highly contagious mite), the off-host environment and the host sex govern the prevalence and abundance of lice and ticks. Null model analysis was applied to assess the impact of S. scabiei on the structure of the ectoparasite communities.

Results

Our results suggest that S. scabiei infestation acts in tandem with off-host environment and host sex to define the prevalence and abundance of lice and ticks. We also provided evidence for differences in species co-occurrence only at the early stages of S. scabiei infestation. Regarding species diversity, we recorded that ectoparasite communities in scabietic ibexes reached a high richness faster than those in healthy individuals.

Conclusions

Even though we show that ectoparasite burden is correlated with S. scabiei infestation, off-host environment and host sex, the species response to S. scabiei infestation and climate seem to be highly variable and influenced by ectoparasite life-history traits. Ectoparasite communities also appear resilient to perturbations which is in agreement with what was previously reported for endoparasites. Future refinement of sample collection and the incorporation of ecological and epidemiological-related variables may allow us to establish causal effects and deepen the knowledge about the mechanisms and consequences of ectoparasite interactions.

Evolution of body size, vision, and biodiversity of coral-associated organisms: evidence from fossil crustaceans in cold-water coral and tropical coral ecosystems

BACKGROUND

Modern cold-water coral and tropical coral environments harbor a highly diverse and ecologically important macrofauna of crustaceans that face elevated extinction risks due to reef decline. The effect of environmental conditions acting on decapod crustaceans comparing these two habitats is poorly understood today and in deep time. Here, we compare the biodiversity, eye socket height as a proxy for eye size, and body size of decapods in fossil cold-water and tropical reefs that formed prior to human disturbance.

RESULTS

We show that decapod biodiversity is higher in fossil tropical reefs from The Netherlands, Italy, and Spain compared to that of the exceptionally well-preserved Paleocene (Danian) cold-water reef/mound ecosystem from Faxe (Denmark), where decapod diversity is highest in a more heterogeneous, mixed bryozoan-coral habitat instead of in coral and bryozoan-dominated facies. The relatively low diversity at Faxe was not influenced substantially by the preceding Cretaceous/Paleogene extinction event that is not apparent in the standing diversity of decapods in our analyses, or by sampling, preservation, and/or a latitudinal diversity gradient. Instead, the lower availability of food and fewer hiding places for decapods may explain this low diversity. Furthermore, decapods from Faxe are larger than those from tropical waters for half of the comparisons, which may be caused by a lower number of predators, the delayed maturity, and the increased life span of crustaceans in deeper, colder waters. Finally, deep-water specimens of the benthic crab Caloxanthus from Faxe exhibit a larger eye socket size compared to congeneric specimens from tropical reefs, suggesting that dim light conditions favored the evolution of relatively large eyes.

CONCLUSIONS

The results suggest a strong habitat control on the biodiversity of crustaceans in coral-associated environments and that the diversity difference between deep, cold-water reefs and tropical reefs evolved at least ~63 million years ago. Futhermore, body size and vision in crustaceans evolved in response to environmental conditions in the deep sea. We highlight the usefulness of ancient reefs to study organismal evolution and ecology.

Lethal and sub-lethal responses of the biogenic reef forming polychaete Sabellaria alveolata to aqueous chlorine and temperature

Sabellaria alveolata, a reef-forming marine polychaete, was exposed to aqueous chlorine which is routinely used as an anti-fouling agent in power station cooling water. Worms were treated to a range of chlorination levels (0, 0.02, 0.1 and 0.5 mg l(-1) Total Residual Oxidant referred to as control, low, intermediate and high TRO) at mean and maximum summer temperatures (18 and 23 °C respectively). Overall mortality was relatively low, however a combination of high temperature and intermediate and high TRO resulted in a significant increase in mortality compared to the control and low TRO treatments. In contrast the extension of dwelling tubes was reduced at high TRO, but increased at low and intermediate TRO levels relative to the controls independent of temperature. Finally, tube strength was found to decrease with increasing TRO, again independent of temperature. On the basis of these findings, S. alveolata can be considered tolerant of one month exposures to low TRO at water temperatures up to and including the summer maxima for southern UK waters. However, at higher TRO levels and during warm weather, high mortality would be predicted.

Mother knows the best mould: an essential role for non-wood dietary components in the life cycle of a saproxylic scarab beetle

Beetles living in tree hollows can feed on a wealth of substrates-e.g. the rotten wood surrounding the cavity, leaf humus falling into the hole, and larval frass accumulating in the cavity. In this paper, we examine the role of these main substrates in Finnish tree hollows in the female preference and larval growth of the hermit beetle Osmoderma barnabita. We rear larvae on diets consisting of wood material (as affected by brown-rot), leaf humus, and larval frass, in varying proportions. To pinpoint the effects of microbes, we contrast larval growth on sterilized versus unsterilized larval frass, and on pure mycelia of the cavity-creating fungus Laetiporus sulphureus. Finally, to relate larval performance to female preference, we examine female choice among the three main substrates used in the larval rearings. We found that the presence of one substrate modifies the influence of another, with larval growth and survival being highest on pure leaf humus. Microbes came with both positive and negative impacts on larval performance, as larvae grew quicker on unsterilized than on sterilized larval frass, but were also struck by higher mortality. On pure fungal mycelia, larvae neither grew nor survived. Female preference reflected larval performance, with leaf humus being preferred over other resources. Overall, our study suggests that organisms inhabiting tree holes may be dependent on subsidies entering the cavity from outside, and that ovipositing females may specifically respond to the presence of such subsidies. Thus, the quality of a microhabitat may depend on what enters it from outside.

Mussels of a marginal population affect the patterns of ambient macrofauna: A case study from the Baltic Sea

In contemporary ecosystems, organisms are increasingly confronted with suboptimal living conditions. We aimed to understand the role of ecosystem engineering species in suboptimal habitats from a population inhabiting the species range margin in naturally stressful conditions. We determined the impact of 2-4 cm sized patches of dwarfed mussels Mytilus trossulus close to its lower salinity limit in the North-Eastern Baltic Sea, on epibenthic community patterns. Mussels affected total macrofaunal abundance and biomass and the taxonomic and functional community structure based on abundances, as well as the species composition of macrofauna. Mussels did not affect ephemeral algae or sediment chlorophyll content, but increased the abundance, biomass, richness, and diversity of grazers, within a radius approximately twelve times the size of mussel patches. We can expect marginal populations of ecosystem engineers in suboptimal habitats to contribute to spatial heterogeneity in biotic patterns and eventual ecosystem stability.

Oyster reef restoration supports increased nekton biomass and potential commercial fishery value

Across the globe, discussions centered on the value of nature drive many conservation and restoration decisions. As a result, justification for management activities increasingly asks for two lines of evidence: (1) biological proof of augmented ecosystem function or service, and (2) monetary valuation of these services. For oyster reefs, which have seen significant global declines and increasing restoration work, the need to provide both biological and monetary evidence of reef services on a local-level has become more critical in a time of declining resources. Here, we quantified species biomass and potential commercial value of nekton collected from restored oyster (Crassostrea virginica) reefs in coastal Louisiana over a 3-year period, providing multiple snapshots of biomass support over time. Overall, and with little change over time, fish and invertebrate biomass is 212% greater at restored oyster reefs than mud-bottom, or 0.12 kg m⁻². The additional biomass of commercial species is equivalent to an increase of local fisheries value by 226%, or $0.09 m⁻². Understanding the ecosystem value of restoration projects, and how they interact with regional management priorities, is critical to inform local decision-making and provide testable predictions. Quantitative estimates of potential commercial fisheries enhancement by oyster reef restoration such as this one can be used directly by local managers to determine the expected return on investment.

Population structure and spread of the polychaete Diopatra biscayensis along the French Atlantic coast: human-assisted transport by-passes larval dispersal

Intertidal populations of the ecosystem engineering polychaete, Diopatra biscayensis, were analyzed on the French Atlantic coast for three years with individual size estimated from tube-cap aperture. All but the northernmost population along the Bay of Biscay have yearly recruitment. Individuals live 3-5 years and are likely reproductive as one year olds. Simulations indicate dispersal distances are <50 km; yet, populations also exist within the Normano-Breton Gulf in the western English Channel, more than 450 km from the northernmost Bay of Biscay population at La Trinité-sur-Mer. Three of the four populations in the Normano-Breton Gulf have no young of the year, but are near to active mussel culture where mussel seed is transported on ropes from dense D. biscayensis areas in the Vendée-Charente region in the Bay of Biscay. The majority of D. biscayensis were adjacent to the likely source, mussel seed ropes. Transport assisted by aquaculture is the likely explanation for the populations in the Normano-Breton Gulf.

Why do leaf-tying caterpillars abandon their leaf ties?

Leaf-tying caterpillars act as ecosystem engineers by building shelters between overlapping leaves, which are inhabited by other arthropods. Leaf-tiers have been observed to leave their ties and create new shelters (and thus additional microhabitats), but the ecological factors affecting shelter fidelity are poorly known. For this study, we explored the effects of resource limitation and occupant density on shelter fidelity and assessed the consequences of shelter abandonment. We first quantified the area of leaf material required for a caterpillar to fully develop for two of the most common leaf-tiers that feed on white oak, Quercus alba. On average, Psilocorsis spp. caterpillars consumed 21.65 ± 0.67 cm² leaf material to complete development. We also measured the area of natural leaf ties found in a Maryland forest, to determine the distribution of resources available to caterpillars in situ. Of 158 natural leaf ties examined, 47% were too small to sustain an average Psilocorsis spp. caterpillar for the entirety of its development. We also manipulated caterpillar densities within experimental ties on potted trees to determine the effects of cohabitants on the likelihood of a caterpillar to leave its tie. We placed 1, 2, or 4 caterpillars in ties of a standard size and monitored the caterpillars twice daily to track their movement. In ties with more than one occupant, caterpillars showed a significantly greater propensity to leave their tie, and left sooner and at a faster rate than those in ties as single occupants. To understand the consequences of leaf tie abandonment, we observed caterpillars searching a tree for a site to build a shelter in the field. This is a risky behavior, as 17% of the caterpillars observed died while searching for a shelter site. Caterpillars that successfully built a shelter traveled 110 ± 20 cm and took 28 ± 7 min to find a suitable site to build a shelter. In conclusion, leaf-tying caterpillars must frequently abandon their leaf tie due to food limitation and interactions with other caterpillars, but this is a costly behavior.

Strong species-environment feedback shapes plant community assembly along environmental gradients

An aim of community ecology is to understand the patterns of competing species assembly along environmental gradients. All species interact with their environments. However, theories of community assembly have seldom taken into account the effects of species that are able to engineer the environment. In this modeling study, we integrate the species' engineering trait together with processes of immigration and local dispersal into a theory of community assembly. We quantify the species' engineering trait as the degree to which it can move the local environment away from its baseline state towards the optimum state of the species (species-environment feedback). We find that, in the presence of immigration from a regional pool, strong feedback can increase local species richness; however, in the absence of continual immigration, species richness is a declining function of the strength of species-environment feedback. This shift from a negative effect of engineering strength on species richness to a positive effect, as immigration rate increases, is clearer when there is spatial heterogeneity in the form of a gradient in environmental conditions than when the environment is homogeneous or it is randomly heterogeneous. Increasing the scale over which local dispersal occurs can facilitate species richness when there is no species-environment feedback or when the feedback is weak. However, increases in the spatial scale of dispersal can reduce species richness when the species-environment feedback is strong. These results expand the theoretical basis for understanding the effects of the strength of species-environment feedback on community assembly.

Shifts from native to non-indigenous mussels: enhanced habitat complexity and its effects on faunal assemblages

Ecosystem engineers such as mussels may affect strongly both the structure of benthic assemblages and the ecosystem functioning. The black-pygmy mussel Limnoperna securis is an invasive species that is spreading along the Galician coast (NW Spain). Its current distribution overlaps with the distribution of the commercial native mussel species Mytilus galloprovincialis, but only in the inner part of two southern Galician rias. Here, we analysed the assemblages associated with clumps of the two mussel species and evaluated if the invasive species increased complexity of habitat. To measure complexity of clumps we used a new method modified from the "chain and tape" method. Results showed that the identity of the mussel influenced macrofaunal assemblages, but not meiofauna. L. securis increased the complexity of clumps, and such complexity explained a high percentage of variability of macrofauna. The shift in dominance from M. galloprovincialis to L. securis may alter habitat structure and complexity, affecting the macrofaunal assemblages with unpredictable consequences on trophic web relations.

Local and latitudinal variation in abundance: the mechanisms shaping the distribution of an ecosystem engineer

Ecological processes that determine the abundance of species within ecological communities vary across space and time. These scale-dependent processes are especially important when they affect key members of a community, such as ecosystem engineers that create shelter and food resources for other species. Yet, few studies have examined the suite of processes that shape the abundance of ecosystem engineers. Here, we evaluated the relative influence of temporal variation, local processes, and latitude on the abundance of an engineering insect-a rosette-galling midge, Rhopalomyia solidaginis (Diptera: Cecidomyiidae). Over a period of 3-5 years, we studied the density and size of galls across a suite of local experiments that manipulated genetic variation, soil nutrient availability, and the removal of other insects from the host plant, Solidago altissima (tall goldenrod). We also surveyed gall density within a single growing season across a 2,300 km latitudinal transect of goldenrod populations in the eastern United States. At the local scale, we found that host-plant genotypic variation was the best predictor of rosette gall density and size within a single year. We found that the removal of other insect herbivores resulted in an increase in gall density and size. The amendment of soil nutrients for four years had no effect on gall density, but galls were smaller in carbon-added plots compared to control and nitrogen additions. Finally, we observed that gall density varied several fold across years. At the biogeographic scale, we observed that the density of rosette gallers peaked at mid-latitudes. Using meta-analytic approaches, we found that the effect size of time, followed by host-plant genetic variation and latitude were the best predictors of gall density. Taken together, our study provides a unique comparison of multiple factors across different spatial and temporal scales that govern engineering insect herbivore density.