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Sarna-Boś K, Boguta P, Szymańska-Chargot M, Skic K, Zdunek A, Stachurski P, Vodanovic M, Chałas R. Insight into structural and chemical profile / composition of powdered enamel and dentine in different types of permanent human teeth. Micron 2024; 179:103608. [PMID: 38354449 DOI: 10.1016/j.micron.2024.103608] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2023] [Revised: 02/03/2024] [Accepted: 02/05/2024] [Indexed: 02/16/2024]
Abstract
Research on the structure and chemical composition of dental tissues allows for the optimisation of materials used in the treatment and care of teeth. Understanding pathological processes occurring in dental tissues and their reactions to various substances, including dental materials, are crucial for the development of new dental technologies. The aim of the study was to check the similarities in the chemical and morphological structure of enamel and dentine powders in various groups of permanent teeth, as well as differential chemical analysis for both grinded tissues tested. The extracted non-carious and non-pathological human permanent teeth were divided into four groups: incisors, canines, premolars and molars. Each tooth was sectioned to thick slices. Enamel and dentine were mechanically separated and ground in an agate mortar and pestle. FT-Raman and FTIR spectroscopy methods were used for the analysis of biological tissues. SEM method was applied to visualise hard dental tissues structures present on the surface and within the particles. The morphological structures were the same within the analysed tissues and did not depend on the analysed group of teeth. A comparison of the mineral-to-organic ratios of enamel and dentine in each tooth group showed that the bands related to PO43- were clearly higher in content for enamel than for dentine. Higher absorbance measured at the region of 2800-3700 cm-1 and at 1500-1800 cm-1 for dentine as compared to enamel samples were indicative of a higher content of organic structures. The highest contribution of phosphates was in canine enamel samples.The studies showed that the carbonate-to-phosphate ratio was higher for dentine (0.20 - 0.48) compared to the values obtained for enamel (0.13 - 0.22), however, minor differences were found in each group of enamel or dentine samples. The lack of significant differences between the enamel and dentine powders of incisors, canines, premolars and molars may prove that each extracted tooth, regardless of the tooth group, is an excellent substrate for their substitution.
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Affiliation(s)
- Katarzyna Sarna-Boś
- Department of Dental Prosthetics, Medical University of Lublin, Chodźki 6, Lublin 20-093, Poland.
| | - Patrycja Boguta
- Institute of Agrophysics, Polish Academy of Sciences, Doświadczalna 4, Lublin 20-290, Poland
| | | | - Kamil Skic
- Institute of Agrophysics, Polish Academy of Sciences, Doświadczalna 4, Lublin 20-290, Poland
| | - Artur Zdunek
- Institute of Agrophysics, Polish Academy of Sciences, Doświadczalna 4, Lublin 20-290, Poland
| | - Piotr Stachurski
- Department of Paediatric Dentistry, Medical University of Lublin, Chodźki 6, Lublin 20-093, Poland
| | - Marin Vodanovic
- Department of Dental Anthropology, University of Zagreb School of Dental Medicine, University Hospital Centre Zagreb, Gundulićeva 5, Zagreb HR-10000, Croatia; Department of Oral Medicine, Medical University of Lublin, Chodźki 6, Lublin 20-093, Poland
| | - Renata Chałas
- Department of Oral Medicine, Medical University of Lublin, Chodźki 6, Lublin 20-093, Poland
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Katemala S, Molee A, Thumanu K, Yongsawatdigul J. Heating temperatures affect meat quality and vibrational spectroscopic properties of slow- and fast-growing chickens. Poult Sci 2023; 102:102754. [PMID: 37276701 PMCID: PMC10276146 DOI: 10.1016/j.psj.2023.102754] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2023] [Revised: 04/17/2023] [Accepted: 04/23/2023] [Indexed: 06/07/2023] Open
Abstract
This study determined the effect of water bath cooking (70°C and 90°C for 40 min) and the extreme heat treatment by an autoclave (121°C for 40 min) on the quality of breast meat of a fast-growing chicken, commercial broiler (CB), and slow-growing chickens, Korat chicken (KC), and Thai native chicken (NC) (Leung Hang Khao), by vibrational spectroscopic techniques, including synchrotron radiation-based Fourier transform infrared (SR-FTIR) microspectroscopy and Fourier transform Raman (FT-Raman) spectroscopy. Taste-enhancing compounds, including inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP), were better retained in cooked KC and NC meats than in cooked CB meat (P < 0.05). The high heat treatment at 121°C depleted the amount of insoluble collagen in all breeds (P < 0.05). Shear force values of slow-growing chicken meat were not affected by high heating temperatures (P > 0.05). In addition, the high heat treatment increased protein carbonyl (P < 0.05), while no effect on in vitro protein digestibility (P > 0.05). SR-FTIR microspectroscopy performed better in differentiating the meat quality of different chicken breeds, whereas FT-Raman spectroscopy clearly revealed differences in meat qualities induced by heating temperature. Based on principal component analysis (PCA), distinct characteristics of chicken meat cooked at 70°C were high water-holding capacity, lightness (L*), moisture content, and predominant α-helix structure, correlating with Raman spectra at 3,217 cm-1 (O-H stretching of water) and 1,651 cm-1 (amide I; α-helix). The high heating temperature at 90°C and 121°C exposed protein structure to a greater extent, as evidenced by an increase in β-sheets, which was well correlated with the Raman spectra at 2,968 and 2,893 cm-1 (C-H stretching), tryptophan (880 cm-1), tyrosine (858 cm-1), and 1,042, 1,020, and 990 cm-1 (C-C stretching; β-sheet). SR-FTIR and FT-Raman spectroscopy show potential for differentiation of chicken meat quality with respect to breeds and cooking temperatures. The marked differences in wavenumbers would be beneficial as markers for determining the quality of cooked meats from slow- and fast-growing chickens.
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Affiliation(s)
- Sasikan Katemala
- School of Food Technology, Institute of Agricultural Technology, Suranaree University of Technology, Nakhon Ratchasima 30000, Thailand
| | - Amonrat Molee
- School of Animal Technology and Innovation, Institute of Agricultural Technology, Suranaree University of Technology, Nakhon Ratchasima 30000, Thailand
| | - Kanjana Thumanu
- Synchrotron Light Research Institute, Nakhon Ratchasima 30000, Thailand
| | - Jirawat Yongsawatdigul
- School of Food Technology, Institute of Agricultural Technology, Suranaree University of Technology, Nakhon Ratchasima 30000, Thailand.
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Krysa M, Szymańska-Chargot M, Zdunek A. FT-IR and FT-Raman fingerprints of flavonoids - A review. Food Chem 2022; 393:133430. [PMID: 35696953 DOI: 10.1016/j.foodchem.2022.133430] [Citation(s) in RCA: 29] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Revised: 05/20/2022] [Accepted: 06/06/2022] [Indexed: 11/23/2022]
Abstract
Flavonoids are secondary metabolites commonly found in plants. They are known for their antioxidant properties, are part of the defense mechanisms of plants and are responsible for the pigmentation of fruit and flowers petals. Consumption foods rich in flavonoids in the daily diet brings a number of pro-health benefits - for example blood pressure regulation, delaying the aging process or anti-cancer effect. These compounds in synthetic or natural form are also used in pharmacy. The profile of flavonoid compounds can be quickly, accurately and easy determine in the test sample by using the infrared and Raman spectroscopy. Those methods are successfully used in the food and pharmaceutical industries. Spectroscopy methods allow us to determine the chemical structure of these compounds. This review describes and compares differences between the spectroscopic spectra of individual compounds with the chemical structure for the flavonoids subgroups: flavones, isoflavones, flavanones, flavonols and anthocyanins.
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Akgun OM, Haman Bayari S, Ide S, Guven Polat G, Yildirim C, Orujalipoor I. Evaluation of the protective effect on enamel demineralization of CPP-ACP paste and ROCS by vibrational spectroscopy and SAXS: An in vitro study. Microsc Res Tech 2021; 84:2977-2987. [PMID: 34213062 DOI: 10.1002/jemt.23857] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2021] [Revised: 05/21/2021] [Accepted: 06/08/2021] [Indexed: 11/09/2022]
Abstract
The aim of this study was to investigate human dental enamel surfaces using attenuated total reflectance Fourier transform infrared spectroscopy (ATR-FTIR), Raman spectroscopy, and small angle X-ray scattering (SAXS) techniques concerning differences between the demineralized enamel surface and remineralized enamel surface by casein phosphopeptide amorphous calcium phosphate, Tooth mousse® (CPP-ACP) and remineralizing oral care systems (ROCS®) agents within the same tooth. For this purpose, 20 freshly extracted human maxillary central incisors without caries and defects were used. Labial surfaces of each of the teeth were divided into four sections, which were marked as follows: Group 1, normal enamel; Group 2, demineralized enamel with demineralization solution; Group 3, demineralized enamel + remineralization agent (ROCS for 10 teeth, CPP-ACP for 10 teeth); and Group 4, remineralization agent (ROCS for 10 teeth, CPP-ACP for 10 teeth). To describe the changes in tooth enamel, the phosphate group concentration within enamel was used as an indicator of the degree of mineralization. The phosphate and carbonate bands in the FTIR and Raman spectra were used to investigate the structural changes in the demineralized and remineralized enamel. Spectroscopic data were statistically analyzed in terms of CPP-ACP and ROCS using one-way analysis of variance. The carbonate content of demineralized enamel was higher than the carbonate content in the other groups (p < .03). The apatite carbonate-phosphate balance in the samples with only remineralizing agent-especially ROCS applied-changed significantly (p < .05) compared to the normal group. The average FTIR spectra of the groups were subjected to multivariate hierarchical cluster analysis (HCA) conducted with the use of the OPUS 5.5 software. Nanosized surface morphologies of the samples were compared using pair distance distributions obtained through SAXS analyses. According to the SAXS analyses, applications of CCP + ACP and ROCS agents were effective on nanostructures for all groups.
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Affiliation(s)
- Ozlem Marti Akgun
- Department of Pediatric Dentistry, Gulhane Faculty of Dentistry, University of Health Sciences, Ankara, Turkey
| | | | - Semra Ide
- Department of Physics Eng., Hacettepe University, Ankara, Turkey
| | - Gunseli Guven Polat
- Department of Pediatric Dentistry, Hamidiye Dentistry Faculty, University of Health Sciences, Istanbul, Turkey
| | - Ceren Yildirim
- Department of Nanotechnology & Nanomedicine, Hacettepe University, Ankara, Turkey
| | - Ilgar Orujalipoor
- Department of Nanotechnology & Nanomedicine, Hacettepe University, Ankara, Turkey
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Depciuch J, Klębowski B, Stec M, Szatanek R, Węglarczyk K, Baj-Krzyworzeka M, Parlińska-Wojtan M, Baran J. Similarities in the General Chemical Composition of Colon Cancer Cells and Their Microvesicles Investigated by Spectroscopic Methods-Potential Clinical Relevance. Int J Mol Sci 2020; 21:E1826. [PMID: 32155840 DOI: 10.3390/ijms21051826] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2019] [Revised: 02/21/2020] [Accepted: 03/04/2020] [Indexed: 12/24/2022] Open
Abstract
Colon cancer constitutes 33% of all cancer cases in humans and the majority of patients with metastatic colon cancer still have poor prognosis. An important role in cancer development is the communication between cancer and normal cells. This may occur, among others, through extracellular vesicles (including microvesicles) (MVs), which are being released by both types of cells. MVs may regulate a diverse range of biological processes and are considered as useful cancer biomarkers. Herein, we show that similarity in the general chemical composition between colon cancer cells and their corresponding tumor-derived microvesicles (TMVs) does exist. These results have been confirmed by spectroscopic methods for four colon cancer cell lines: HCT116, LoVo, SW480, and SW620 differing in their aggressiveness/metastatic potential. Our results show that Raman and Fourier Transform InfraRed (FTIR) analysis of the cell lines and their corresponding TMVs did not differ significantly in the characterization of their chemical composition. However, hierarchical cluster analysis of the data obtained by both of the methods revealed that only Raman spectroscopy provides results that are in line with the molecular classification of colon cancer, thus having potential clinical relevance.
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Fanesi A, Zegeye A, Mustin C, Cébron A. Soil Particles and Phenanthrene Interact in Defining the Metabolic Profile of Pseudomonas putida G7: A Vibrational Spectroscopy Approach. Front Microbiol 2018; 9:2999. [PMID: 30564224 PMCID: PMC6288191 DOI: 10.3389/fmicb.2018.02999] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2018] [Accepted: 11/20/2018] [Indexed: 01/21/2023] Open
Abstract
In soil, organic matter and mineral particles (soil particles; SPs) strongly influence the bio-available fraction of organic pollutants, such as polycyclic aromatic hydrocarbons (PAHs), and the metabolic activity of bacteria. However, the effect of SPs as well as comparative approaches to discriminate the metabolic responses to PAHs from those to simple carbon sources are seldom considered in mineralization experiments, limiting our knowledge concerning the dynamics of contaminants in soil. In this study, the metabolic profile of a model PAH-degrading bacterium, Pseudomonas putida G7, grown in the absence and presence of different SPs (i.e., sand, clays and humic acids), using either phenanthrene or glucose as the sole carbon and energy source, was characterized using vibrational spectroscopy (i.e., FT-Raman and FT-IR spectroscopy) and multivariate classification analysis (i.e., PLS-DA). The different type of SPs specifically altered the metabolic profile of P. putida, especially in combination with phenanthrene. In comparison to the cells grown in the absence of SPs, sand induced no remarkable change in the metabolic profile of the cells, whereas clays and humic acids affected it the most, as revealed by the higher discriminative accuracy (R2, RMSEP and sensitivity) of the PLS-DA for those conditions. With respect to the carbon-source (phenanthrene vs. glucose), no effect on the metabolic profile was evident in the absence of SPs or in the presence of sand. On the other hand, with clays and humic acids, more pronounced spectral clusters between cells grown on glucose or on phenanthrene were evident, suggesting that these SPs modify the way cells access and metabolize PAHs. The macromolecular changes regarded mainly protein secondary structures (a shift from α-helices to β-sheets), amino acid levels, nucleic acid conformation and cell wall carbohydrates. Our results provide new interesting evidences that SPs specifically interact with PAHs in defining bacteria metabolic profiles and further emphasize the importance of studying the interaction of bacteria with their surrounding matrix to deeply understand PAHs degradation in soils.
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Affiliation(s)
- Andrea Fanesi
- Laboratoire Interdisciplinaire des Environnements Continentaux, CNRS, Université de Lorraine, Nancy, France
| | - Asfaw Zegeye
- Laboratoire Interdisciplinaire des Environnements Continentaux, CNRS, Université de Lorraine, Nancy, France
| | - Christian Mustin
- Laboratoire Interdisciplinaire des Environnements Continentaux, CNRS, Université de Lorraine, Nancy, France
| | - Aurélie Cébron
- Laboratoire Interdisciplinaire des Environnements Continentaux, CNRS, Université de Lorraine, Nancy, France
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Suzuki EM, Buzzing P. Applications of Raman spectroscopy in forensic science. I: Principles, comparison to infrared spectroscopy, and instrumentation. Forensic Sci Rev 2018; 30:111-135. [PMID: 30064966] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
There have been several significant advances in Raman spectroscopy instrument technology during the past few decades, including the introduction of several new laser sources, the development of holographic gratings, efficient Rayleigh line rejection filters, and CCD array detectors, and the advent of FT-Raman spectrometers. In view of these developments, Raman spectroscopy is now a fully mature analytical technique on par with its counterpart, infrared spectroscopy. The latter technique experienced a quantum leap in use in the forensic science laboratory following the introduction of inexpensive FT-IR spectrometers in the 1980s, but forensic scientists have been slower to embrace Raman spectroscopy. This may stem in part from the perception that fluorescence prevents its use for many samples. However, a more significant factor may be insufficient understanding of the unique capabilities of Raman spectroscopy, including how it can provide information not accessible using other methods. This promising technique is finally making some inroads into the forensic science laboratory, and this will continue as forensic scientists gain a greater appreciation of its features and merits. To facilitate this process, this article presents a comprehensive review of Raman spectroscopy, with an emphasis on how and why this underutilized cousin to infrared spectroscopy can be a very valuable tool for the analysis of a wide variety of evidentiary materials. Owing to the wide scope of this review, it is presented in two parts. Most forensic scientists are not very familiar with inelastic scattering and Part I of this article describes the principles and instrumentation of Raman spectroscopy. Forensic scientists, however, are generally more knowledgeable about infrared spectroscopy, and a comparison of the spectral data produced by these two related vibrational methods for various categories of analytes is also presented and discussed.
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Affiliation(s)
- E M Suzuki
- Washington State Crime Laboratory, Washington State Patrol. Seattle, Washington, United States of America
| | - P Buzzing
- Department of Forensic Science, Sam Houston State University, Huntsville, Texas, United States of America
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Suzuki EM, Buzzing P. Applications of Raman spectroscopy in forensic science. II: Analysis considerations, spectral interpretation, and examination of evidence. Forensic Sci Rev 2018; 30:137-169. [PMID: 30064967] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
There have been several significant advances in Raman spectroscopy instrumentation during the past few decades, and this method is now a fully mature analytical technique on par with its counterpart, infrared spectroscopy. The latter method experienced a quantum leap in use in the forensic science laboratory following the introduction of inexpensive FT-IR spectrometers in the 1980s, but forensic scientists have been slower to embrace Raman spectroscopy. However, this promising technique is finally making some inroads into the forensic science laboratory, and to facilitate this process, this article presents a comprehensive review of Raman spectroscopy; it emphasizes how and why this underutilized method can be a very valuable tool for the analysis of a wide variety of evidentiary materials. Part I of this article described the principles of Raman spectroscopy, including theory, instrumentation, and a comparison of spectral data obtained using infrared and Raman methods for various analytes. Part II discusses how different analytical conditions can affect Raman spectra, and what bearing this and other factors may have on spectral interpretation; it also presents a review of the literature describing applications of Raman spectroscopy for the examination of various types of evidence.
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Affiliation(s)
- E M Suzuki
- Washington State Crime Laboratory, Washington State Patrol. Seattle, Washington, United States of America
| | - P Buzzing
- Department of Forensic Science, Sam Houston State University, Huntsville, Texas, United States of America
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Eksi-Kocak H, Ilbasmis Tamer S, Yilmaz S, Eryilmaz M, Boyaci IH, Tamer U. Quantification and spatial distribution of salicylic acid in film tablets using FT-Raman mapping with multivariate curve resolution. Asian J Pharm Sci 2017; 13:155-162. [PMID: 32104388 PMCID: PMC7032144 DOI: 10.1016/j.ajps.2017.07.010] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2016] [Revised: 03/14/2017] [Accepted: 07/26/2017] [Indexed: 11/26/2022] Open
Abstract
In this study, we proposed a rapid and sensitive method for quantification and spatial distribution of salicylic acid in film tablets using FT-Raman spectroscopy with multivariate curve resolution (MCR). For this purpose, the constituents of film tablets were identified by using FT-Raman spectroscopy, and then eight different concentrations of salicylic acid tablets were visualized by Raman mapping. MCR was applied to mapping data to expose the active pharmaceutical ingredients in the presence of other excipients by monitoring distribution maps and combination of FT-Raman mapping with MCR enabled the determination of lower salicylic acid concentrations. In addition, the distribution of major excipient, lactose, was examined in the tablet form. A calibration curve was obtained by plotting the intensity of the Raman signal at 1635 cm−1 versus the concentration of salicylic acid and the correlation was found to be linear within the range of 0.5%–3.9% with a correlation coefficient of 0.99. The limit of detection for the technique was determined 0.35%. The ability of the technique to quantify salicylic acid in tablet test samples was also investigated.
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Affiliation(s)
- Haslet Eksi-Kocak
- Department of Biomedical Engineering, Faculty of Engineering, Istanbul Aydin University, Istanbul 34295, Turkey
| | - Sibel Ilbasmis Tamer
- Department of Pharmaceutical Technology, Faculty of Pharmacy, Gazi University, Etiler, Ankara 06330, Turkey
| | - Sebnem Yilmaz
- Department of Analytical Chemistry, Faculty of Pharmacy, Gazi University, Etiler, Ankara 06330, Turkey
| | - Merve Eryilmaz
- Department of Analytical Chemistry, Faculty of Pharmacy, Gazi University, Etiler, Ankara 06330, Turkey
| | - Ismail Hakkı Boyaci
- Department of Biomedical Engineering, Faculty of Engineering, Istanbul Aydin University, Istanbul 34295, Turkey.,Food Research Center, Hacettepe University, Beytepe, Ankara 06800, Turkey
| | - Ugur Tamer
- Department of Analytical Chemistry, Faculty of Pharmacy, Gazi University, Etiler, Ankara 06330, Turkey
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Özgenç Ö, Durmaz S, Boyaci IH, Eksi-Kocak H. Determination of chemical changes in heat-treated wood using ATR-FTIR and FT Raman spectrometry. Spectrochim Acta A Mol Biomol Spectrosc 2017; 171:395-400. [PMID: 27569772 DOI: 10.1016/j.saa.2016.08.026] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2016] [Revised: 08/03/2016] [Accepted: 08/16/2016] [Indexed: 05/27/2023]
Abstract
In this study, attenuated total reflectance-Fourier transform infrared (ATR-FTIR) and Fourier-transform Raman (FT-Raman) spectroscopy techniques were used to determine changes in the chemical structure of heat-treated woods. For this purpose, scots pine (Pinus sylvestris L.), oriental beech (Fagus orientalis L.), and oriental spruce (Picea orientalis L.) wood species were heat-treated at different temperatures. The effect of chemical changes on the FT-Raman and ATR-FTIR bands or ratios of heat-treated wood was related with the OH association of cellulose, functional groups, and the aromatic system of lignin. The effects of heat treatment on the carbohydrate and lignin peaks varied depending on the wood species. The spectral changes that occurred after heat treatment reflected the progress of the condensation reaction of lignin. Degradation of hemicelluloses led to a decrease in free hydroxyl groups. High temperature caused crystalline cellulose to increase due to the degradation of amorphous cellulose.
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Affiliation(s)
- Özlem Özgenç
- Department of Forest Industry Engineering, Faculty of Forestry, Karadeniz Technical University, 61080 Trabzon, Turkey.
| | - Sefa Durmaz
- Department of Forest Industry Engineering, Faculty of Forestry, Karadeniz Technical University, 61080 Trabzon, Turkey.
| | - Ismail Hakki Boyaci
- Department of Food Engineering, Faculty of Engineering, Hacettepe University, Beytepe Campus, TR-06532 Ankara, Turkey.
| | - Haslet Eksi-Kocak
- Department of Food Engineering, Faculty of Engineering, Hacettepe University, Beytepe Campus, TR-06532 Ankara, Turkey.
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Pallipurath A, Skelton J, Bucklow S, Elliott S. A chemometric study of ageing in lead-based paints. Talanta 2015; 144:977-85. [PMID: 26452916 DOI: 10.1016/j.talanta.2015.07.037] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2015] [Revised: 07/04/2015] [Accepted: 07/12/2015] [Indexed: 11/28/2022]
Abstract
The development of non-invasive analytical methods is of widespread interest to the field of conservation science, providing chemical insight into the materials used to create painted works of art, which can, for example, inform decisions about their restoration and preservation, or help discern original works from forgeries. A key undertaking in this area is to develop practical methods for identifying and understanding the chemical processes that occur in paint films under ageing. Furthermore, whereas a number of scientific studies have focussed on model systems in which natural ageing processes are simulated in a short time by irradiation under ultraviolet (UV) light, it remains to be established to what extent natural and accelerated ageing induce similar chemical changes. In this work, we employ FT-Raman spectroscopy, together with a simple spectral-deconvolution algorithm, to study in detail the spectral changes accompanying the natural and UV-accelerated ageing of lead-based paint films. We find that the two processes differ significantly, and that spectroscopic signatures, principally in the fluorescence background, can thus be used to differentiate the two modes of ageing and hence possibly to identify attempted forgeries. Our studies also suggest that paints based on proteinaceous binders are more stable to ageing than lipid-bound ones. Finally, we investigate the possibility of using our chemometric deconvolution technique, in conjunction with multivariate analysis, for the semi-automated characterisation of the degree or extent of ageing in unknown samples.
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Affiliation(s)
- Anuradha Pallipurath
- Department of Chemistry, University of Cambridge, Lensfield Road, CB2 1EW Cambridge, UK
| | - Jonathan Skelton
- Department of Chemistry, University of Cambridge, Lensfield Road, CB2 1EW Cambridge, UK
| | - Spike Bucklow
- Hamilton-Kerr Institute, University of Cambridge, Mill Lane, Whittlesford, CB22 4NE Cambridge, UK
| | - Stephen Elliott
- Department of Chemistry, University of Cambridge, Lensfield Road, CB2 1EW Cambridge, UK.
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Kanagathara N, Marchewka MK, Drozd M, Gunasekaran S, Rajakumar PR, Anbalagan G. Structural and vibrational spectroscopic studies on charge transfer and ionic hydrogen bonding interactions of melaminium benzoate dihydrate. Spectrochim Acta A Mol Biomol Spectrosc 2015; 145:394-409. [PMID: 25796010 DOI: 10.1016/j.saa.2015.03.002] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2014] [Revised: 02/21/2015] [Accepted: 03/01/2015] [Indexed: 06/04/2023]
Abstract
Single crystals of melaminium benzoate dihydrate (MBDH) have been grown from aqueous solution by the slow solvent evaporation method at room temperature. Crystalline nature of the grown crystal has been confirmed by X-ray powder diffraction studies. The optimized geometry, frequency and intensity of the vibrational bands of MBDH were obtained by the Hartree-Fock and density functional theory using B3LYP/cam-B3LYP with 6-311++G(d,p) basis set. The harmonic vibrational frequencies were calculated and the scaled values have been compared with the experimental FT-IR and FT-Raman spectral values. The obtained vibrational wavenumbers and optimized geometric parameters are found to be in good agreement with the experimental data. UV-Visible spectrum was recorded in the region 200-400 nm and the electronic properties, HOMO-LUMO energies and other related electronic parameters are calculated. The isotropic chemical shifts computed by (1)H and (13)C NMR analysis also show good agreement with experimental observation. Natural bond orbital (NBO) analysis has been performed on MBDH compound to analyze the stability of the molecule arising from hyperconjugative interactions and charge delocalization. Molecular electrostatic potential surface (MEP) has also been performed by DFT/cam-B3LYP method with 6-311++G(d,p) basis set. Differential scanning calorimetric measurements performed on the powder sample indicate the phase transition point approximately at 368 and 358K for heating and cooling, respectively.
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Affiliation(s)
- N Kanagathara
- Department of Physics, Vel Tech University, Chennai 62, India
| | - M K Marchewka
- Institute of Low Temperature and Structure Research, Polish Academy of Sciences, 50-950 Wrocław, 2, P.O. Box 937, Poland
| | - M Drozd
- Institute of Low Temperature and Structure Research, Polish Academy of Sciences, 50-950 Wrocław, 2, P.O. Box 937, Poland
| | | | - P R Rajakumar
- Department of Chemistry, Government Arts College, C-Mutlur, Chidambaram 2, India
| | - G Anbalagan
- Department of Physics, Presidency College, Chennai 5, India.
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Shkir M, Muhammad S, AlFaify S, Irfan A, Yahia IS. A dual approach to study the electro-optical properties of a noncentrosymmetric L-asparagine monohydrate. Spectrochim Acta A Mol Biomol Spectrosc 2015; 137:432-41. [PMID: 25238181 DOI: 10.1016/j.saa.2014.08.033] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2014] [Revised: 06/29/2014] [Accepted: 08/21/2014] [Indexed: 05/25/2023]
Abstract
In this work we reports the experimental and theoretical investigation on an organic noncentrosymmetric monohydrated L-asparagine (LAM) molecule. LAM single crystals were grown in specially designed beaker for the first time. Structural confirmation was done by identifying the vibrational modes using IR and FT-Raman spectroscopic studies. The ultra violet-visible-near infrared absorbance, diffuse reflectance spectra were recorded in the spectral range 190-2500 nm. The optical transparency was calculated and found to be ∼80%. Its optical band gap was calculated found to be ∼5.100 eV. Density functional theory (DFT) was employed to optimize the molecular geometry of LAM using B3LYP/6-31G(∗) basis set of theory. The HOMO-LUMO energy gap of 6.047 eV and transition energy of 176 nm (f0=0.024) have been found in semi-quantitative agreement with our experimental results. The dipole moment, polarizability and first hyperpolarizability were calculated at the same level of theory. The obtained results reveals that the titled compound can be a decent contender for nonlinear applications.
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Affiliation(s)
- Mohd Shkir
- Department of Physics, Faculty of Science, King Khalid University, P.O. Box 9004, Abha 61413, Saudi Arabia; Center of Excellence for Advanced Materials Research, King Khalid University, P.O. Box 9004, Abha 61413, Saudi Arabia.
| | - Shabbir Muhammad
- Department of Physics, Faculty of Science, King Khalid University, P.O. Box 9004, Abha 61413, Saudi Arabia; Center of Excellence for Advanced Materials Research, King Khalid University, P.O. Box 9004, Abha 61413, Saudi Arabia
| | - S AlFaify
- Department of Physics, Faculty of Science, King Khalid University, P.O. Box 9004, Abha 61413, Saudi Arabia; Center of Excellence for Advanced Materials Research, King Khalid University, P.O. Box 9004, Abha 61413, Saudi Arabia
| | - Ahmad Irfan
- Department of Chemistry, Faculty of Science, King Khalid University, P.O. Box 9004, Abha 61413, Saudi Arabia; Center of Excellence for Advanced Materials Research, King Khalid University, P.O. Box 9004, Abha 61413, Saudi Arabia
| | - I S Yahia
- Department of Physics, Faculty of Science, King Khalid University, P.O. Box 9004, Abha 61413, Saudi Arabia; Center of Excellence for Advanced Materials Research, King Khalid University, P.O. Box 9004, Abha 61413, Saudi Arabia
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Cuellar A, Alcolea Palafox M, Rastogi VK, Kiefer W, Schlücker S, Rathor SK. FT-IR and FT-Raman spectra of 5-fluoroorotic acid with solid state simulation by DFT methods. Spectrochim Acta A Mol Biomol Spectrosc 2014; 132:430-445. [PMID: 24887505 DOI: 10.1016/j.saa.2014.04.107] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2014] [Revised: 04/11/2014] [Accepted: 04/22/2014] [Indexed: 06/03/2023]
Abstract
FT-Raman and FT-IR studies of the biomolecule 5-fluoroorotic acid in the solid state were carried out. The unit cell found in the crystal was simulated as a tetramer form by density functional calculations. They were performed to clarify wavenumber assignments of the experimental observed bands in the spectra. Correlations with the molecule of uracil were made, and specific scale equations were employed to scale the wavenumbers of 5-fluoroorotic acid. Good reproduction of the experimental wavenumbers is obtained and the % error is very small in the majority of the bands. This fact confirms our simplified solid state model. The molecular structure was fully optimized using DFT and MP2 methods. The relative stability of both the syn and anti conformations was investigated, and the anti-form was found to be slightly more stable, by 7.49 kJ/mol at the MP2 level. The structures of all possible tautomeric forms were determined. The keto-form appeared as the most stable one. The NBO atomic charges and several thermodynamic parameters were also calculated.
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Affiliation(s)
- A Cuellar
- Departamento de Química-Física I, Facultad de Ciencias Químicas, Universidad Complutense, Madrid 28040, Spain
| | - M Alcolea Palafox
- Departamento de Química-Física I, Facultad de Ciencias Químicas, Universidad Complutense, Madrid 28040, Spain.
| | - V K Rastogi
- R D Foundation Group of Institutions, NH-58, Kadrabad, Modinagar, Ghaziabad, India; Indian Spectroscopy Society, KC 68/1, Old Kavinagar, Ghaziabad 201 002, India.
| | - W Kiefer
- University of Würzburg, Institute for Physical and Theoretical Chemistry, Am Hubland, D-97074 Würzburg, Germany
| | - S Schlücker
- University of Duisburg-Essen, Faculty of Chemistry, Universitätsstr. 5, D-45141 Essen, Germany
| | - S K Rathor
- Indian Spectroscopy Society, KC 68/1, Old Kavinagar, Ghaziabad 201 002, India
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15
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Jangir DK, Mehrotra R. Raman spectroscopic evaluation of DNA adducts of a platinum containing anticancer drug. Spectrochim Acta A Mol Biomol Spectrosc 2014; 130:386-389. [PMID: 24810023 DOI: 10.1016/j.saa.2014.04.030] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2013] [Revised: 03/30/2014] [Accepted: 04/04/2014] [Indexed: 06/03/2023]
Abstract
Mechanistic understanding of the interaction of drugs with their target molecules is important for better understanding of their mode of action and to improve their efficacy. Carboplatin is a platinum containing anticancer drug, used to treat different type of tumors. In the present work, we applied Raman spectroscopy to study the interaction of carboplatin with DNA at molecular level using different carboplatin-DNA molar ratios. These Raman spectroscopic results provide comprehensive understanding on the carboplatin-DNA interactions and indicate that DNA cross-linked adducts formed by carboplatin are similar to cisplatin adducts. The results indicate that guanine N7 and adenine N7 are the putative sites for carboplatin interaction. It is observed that carboplatin has some affinity toward cytosine in DNA. Phosphate sugar backbone of DNA showed conformation perturbation in DNA which were easily sensible at higher concentrations of carboplatin. Most importantly, carboplatin interaction induces intermediate A- and B-DNA conformations at the cross-linking sites.
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Affiliation(s)
- Deepak K Jangir
- Quantum Optics and Photon Physics, CSIR-National Physical Laboratory, Dr. K.S. Krishnan Road, New Delhi 110012, India
| | - Ranjana Mehrotra
- Quantum Optics and Photon Physics, CSIR-National Physical Laboratory, Dr. K.S. Krishnan Road, New Delhi 110012, India.
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Cornelio RB, Wikant A, Mjøsund H, Kopperud HM, Haasum J, Gedde UW, Örtengren UT. The influence of bis-EMA vs bis GMA on the degree of conversion and water susceptibility of experimental composite materials. Acta Odontol Scand 2014; 72:440-7. [PMID: 24255958 DOI: 10.3109/00016357.2013.856467] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
OBJECTIVE The aim of this work was to assess the influence of the bis-EMA content on the degree of conversion (DC) and its effect on the water sorption and solubility. MATERIALS AND METHODS In a polytetrafluorethylene (PTFE) mould, 30 samples (Ø = 5 mm, height = 2 mm) of four experimental dental composite resins were cured for 10 s, 20 s and 40 s. The DC was analysed by Fourier Transform (FT)-Raman spectroscopy. To analyse sorption and solubility, six samples (Ø = 15 mm and thickness = 1 mm) of each composite (n = 72) were stored in water at 37°C for different storage periods: 24 h, 7 days and 30 days. RESULTS When cured for 20 or 40 s the DC increased with the increasing content of bis-EMA. However, the presence of 15 wt% of bis-GMA did not affect the DC, except when cured with 10 s irradiation time. This study also found a correlation between the content of bis-EMA and the reduced values for sorption and solubility, for all storage times used, when the materials were cured with 20 s. CONCLUSIONS The DC of mixtures with higher content of bis-EMA is affected by the presence of bis-GMA at lower energy density delivered from the curing device, suggesting that the restrictions caused by the presence of hydrogen bonds is dependent of the irradiation time used.
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Affiliation(s)
- Roberto Belloti Cornelio
- Department of Clinical Dentistry/Faculty of Health Sciences, The Arctic University of Norway , Tromsø , Norway
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Selvaraju R, Raja A, Thiruppathi G. Chemical composition and binary mixture of human urinary stones using FT-Raman spectroscopy method. Spectrochim Acta A Mol Biomol Spectrosc 2013; 114:650-7. [PMID: 23816485 DOI: 10.1016/j.saa.2013.05.029] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2013] [Revised: 05/09/2013] [Accepted: 05/13/2013] [Indexed: 05/24/2023]
Abstract
In the present study the human urinary stones were observed in their different chemical compositions of calcium oxalate monohydrate, calcium oxalate dihydrate, calcium phosphate, struvite (magnesium ammonium phosphate), uric acid, cystine, oxammite (ammonium oxalate monohydrate), natroxalate (sodium oxalate), glushinkite (magnesium oxalate dihydrate) and moolooite (copper oxalate) were analyzed using Fourier Transform-Raman (FT-Raman) spectroscopy. For the quantitative analysis, various human urinary stone samples are used for ratios calculation of binary mixtures compositions such as COM/COD, HAP/COD, HAP/COD, Uric acid/COM, uric acid/COD and uric acid/HAP. The calibration curve is used for further analysis of binary mixture of human urinary stones. For the binary mixture calculation the various intensities bands at 1462 cm(-1) (I(COM)), 1473 cm(-1) (I(COD)), 961 cm(-1) (I(HAP)) and 1282 cm(-1) (I(UA)) were used.
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Affiliation(s)
- R Selvaraju
- Department of Engineering Physics, Annamalai University, Annamalainagar 608 002, Tamil Nadu, India.
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Schallreuter KU, Salem MAEL, Holtz S, Panske A. Basic evidence for epidermal H2O2/ONOO(-)-mediated oxidation/nitration in segmental vitiligo is supported by repigmentation of skin and eyelashes after reduction of epidermal H2O2 with topical NB-UVB-activated pseudocatalase PC-KUS. FASEB J 2013; 27:3113-22. [PMID: 23629861 DOI: 10.1096/fj.12-226779] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Nonsegmental vitiligo (NSV) is characterized by loss of inherited skin color. The cause of the disease is still unknown despite accumulating in vivo and in vitro evidence of massive epidermal oxidative stress via H2O2 and peroxynitrite (ONOO(-)) in affected individuals. The most favored hypothesis is based on autoimmune mechanisms. Strictly segmental vitiligo (SSV) with dermatomal distribution is a rare entity, often associated with stable outcome. Recently, it was documented that this form can be associated with NSV (mixed vitiligo). We here asked the question whether ROS and possibly ONOO(-) could be players in the pathogenesis of SSV. Our in situ results demonstrate for the first time epidermal biopterin accumulation together with significantly decreased epidermal catalase, thioredoxin/thioreoxin reductase, and MSRA/MSRB expression. Moreover, we show epidermal ONOO(-) accumulation. In vivo FT-Raman spectroscopy reveals the presence of H2O2, methionine sulfoxide, and tryptophan metabolites; i.e., N-formylkynurenine and kynurenine, implying Fenton chemistry in the cascade (n=10). Validation of the basic data stems from successful repigmentation of skin and eyelashes in affected individuals, regardless of SSV or segmental vitiligo in association with NSV after reduction of epidermal H2O2 (n=5). Taken together, our contribution strongly supports H2O2/ONOO-mediated stress in the pathogenesis of SSV. Our findings offer new treatment intervention for lost skin and hair color.
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Affiliation(s)
- Karin U Schallreuter
- Institute for Pigmentary Disorders, E. M. Arndt University, Greifswald, Germany.
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Daher C, Bellot-Gurlet L, Le Hô AS, Paris C, Regert M. Advanced discriminating criteria for natural organic substances of cultural heritage interest: spectral decomposition and multivariate analyses of FT-Raman and FT-IR signatures. Talanta 2013; 115:540-7. [PMID: 24054630 DOI: 10.1016/j.talanta.2013.06.014] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2012] [Revised: 06/05/2013] [Accepted: 06/11/2013] [Indexed: 10/26/2022]
Abstract
Natural organic substances are involved in many aspects of the cultural heritage field. Their presence in different forms (raw, heated, mixed), with various conservation states, constitutes a real challenge regarding their recognition and discrimination. Their characterization usually involves the use of separative techniques which imply destructive sampling and specific analytical preparations. Here we propose a non destructive approach using FT-Raman and infrared spectroscopies for the identification and differentiation of natural organic substances. Because of their related functional groups, they usually present similar vibrational signatures. Nevertheless the use of appropriate signal treatment and statistical analysis was successfully carried out to overcome this limitation, then proposing new objective discriminating methodology to identify these substances. Spectral decomposition calculations were performed on the CH stretching region of a large set of reference materials such as resins, oils, animal glues, and gums. Multivariate analyses (Principal Component Analyses) were then performed on the fitting parameters, and new discriminating criteria were established. A set of previously characterized archeological resins, with different surface aspects or alteration states, was analyzed using the same methodology. These testing samples validate the efficiency of our discriminating criteria established on the reference corpus. Moreover, we proved that some alteration or ageing of organic materials is not an issue to their recognition.
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Affiliation(s)
- Céline Daher
- Laboratoire de Dynamique, Interactions et Réactivité (LADIR), UMR 7075 CNRS - UPMC (Université Pierre et Marie Curie Paris 6), 4 place Jussieu 75252 Paris Cedex 05, France
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Khalil SK, Allam MA, Tawfik WA. Use of FT-Raman Spectroscopy to Determine the Degree of Polymerization of Dental Composite Resin Cured with a New Light Source. Eur J Dent 2007; 1:72-9. [PMID: 19212480 PMCID: PMC2609952] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022] Open
Abstract
OBJECTIVES To use the FT-Raman spectroscopy for evaluation the degree of polymerization of dental composite as a result of photo curing with a new light source in comparison to the conventional halogen light. MATERIALS AND METHODS In this study a new light source, based on a metal-halide lamp (TOPSPOT G12) was developed at NRC-Egypt for curing dental composites. Two groups of 108 composite samples each were cured using both the new light source and a conventional halogen source, as a control source. Different samples' sizes (2x2, 3x3 and 6x3 mm(2)) were cured for different periods of time (2, 4, 8, 12, 20, and 40 seconds). The spectroscopic data were analyzed statistically by ANOVA and Duncan's multiple range test (P< .05). RESULTS The results showed that the samples cured by the new metal-halide source produced higher polymerization rates than those cured by the halogen source. The polymerization rate was directly proportional to the exposure time and inversely proportional to the sample size, irrespective to the light source used. The results also showed that 12 seconds of metal-halide light curing produced polymerization rate comparable to or even higher than that produced by 40 seconds halogen light curing. CONCLUSIONS The new light source produced a satisfactory degree of polymerization in a remarkable shorter curing time and it can be recommended for clinical use.
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Affiliation(s)
- Safaa K.H. Khalil
- Researcher, Department of Spectroscopy, Physics Division, National Research Centre, Egypt,Corresponding Author:Dr. Safaa K.H. Khalil, Department of Spectroscopy, Physics Division, National Research Centre, 12311, Dokki, Giza, Egypt. Tel: +2 010 540 64 79 E-mail:
| | - Mousa A. Allam
- Researcher, Department of Spectroscopy, Physics Division, National Research Centre, Egypt
| | - Wael A. Tawfik
- Assistant Professor, Department of Oral and Dental Research, National Research Centre, Egypt
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