1
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Salton M, Raoult V, Jonsen I, Harcourt R. Niche partitioning and individual specialisation in resources and space use of sympatric fur seals at their range margin. Oecologia 2024; 204:815-832. [PMID: 38568471 PMCID: PMC11062968 DOI: 10.1007/s00442-024-05537-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2022] [Accepted: 03/03/2024] [Indexed: 05/02/2024]
Abstract
Ecological theory predicts niche partitioning between high-level predators living in sympatry as a mechanism to minimise the selective pressure of competition. Accordingly, male Australian fur seals Arctocephalus pusillus doriferus and New Zealand fur seals A. forsteri that live in sympatry should exhibit partitioning in their broad niches (in habitat and trophic dimensions) in order to coexist. However, at the northern end of their distributions in Australia, both are recolonising their historic range after a long absence due to over-exploitation, and their small population sizes suggest competition should be weak and may allow overlap in niche space. We found some niche overlap, yet clear partitioning in diet trophic level (δ15N values from vibrissae), spatial niche space (horizontal and vertical telemetry data) and circadian activity patterns (timing of dives) between males of each species, suggesting competition may remain an active driver of niche partitioning amongst individuals even in small, peripheral populations. Consistent with individual specialisation theory, broad niches of populations were associated with high levels of individual specialisation for both species, despite putative low competition. Specialists in isotopic space were not necessarily specialists in spatial niche space, further emphasising their diverse individual strategies for niche partitioning. Males of each species displayed distinct foraging modes, with Australian fur seals primarily benthic and New Zealand fur seals primarily epipelagic, though unexpectedly high individual specialisation for New Zealand fur seals might suggest marginal populations provide exceptions to the pattern generally observed amongst other fur seals.
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Affiliation(s)
- Marcus Salton
- School of Natural Sciences, Macquarie University, North Ryde, NSW, 2109, Australia.
- Australian Antarctic Division, Department of Climate Change, Energy, the Environment and Water, Kingston, TAS, 7050, Australia.
| | - Vincent Raoult
- School of Natural Sciences, Macquarie University, North Ryde, NSW, 2109, Australia
- School of Environmental and Life Sciences, University of Newcastle, Ourimbah, 2258, Australia
| | - Ian Jonsen
- School of Natural Sciences, Macquarie University, North Ryde, NSW, 2109, Australia
| | - Robert Harcourt
- School of Natural Sciences, Macquarie University, North Ryde, NSW, 2109, Australia
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2
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Reed J, New L, Corkeron P, Harcourt R. Disentangling the influence of entanglement on recruitment in North Atlantic right whales. Proc Biol Sci 2024; 291:20240314. [PMID: 38471549 DOI: 10.1098/rspb.2024.0314] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2024] [Accepted: 02/14/2024] [Indexed: 03/14/2024] Open
Abstract
North Atlantic right whales are Critically Endangered and declining, with entanglements in fishing gear a key contributor to their decline. Entanglement events can result in lethal and sub-lethal (i.e. increased energetic demands and reduced foraging ability) impacts, with the latter influencing critical life-history states, such as reproduction. Using a multi-event framework, we developed a Bayesian mark-recapture model to investigate the influence of entanglement severity on survival and recruitment for female right whales. We used information from 199 known-aged females sighted between 1977 and 2018, combined with known entanglements of varying severity that were classified as minor, moderate or severe. Severe entanglements resulted in an average decline in survival of 27% for experienced non-breeders, 9% for breeders and 26% for pre-breeding females compared with other entanglements and unentangled individuals. Surviving individuals with severe entanglements had low transitional probabilities to breeders, but surprisingly, individuals with minor entanglements had the lowest transitional probabilities, contrary to expectations underpinning current management actions. Management actions are needed to address the lethal and sub-lethal impacts of entanglements, regardless of severity classification.
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Affiliation(s)
- Joshua Reed
- School of Natural Sciences, Macquarie University, North Ryde, New South Wales, 2109, Australia
| | - Leslie New
- Department of Mathematics, Computer Science and Statistics, Ursinus College, Collegeville, PA, 19426, USA
| | - Peter Corkeron
- Centre for Planetary Health and Food Security, Griffith University, Nathan, Queensland 4111, Australia
| | - Robert Harcourt
- School of Natural Sciences, Macquarie University, North Ryde, New South Wales, 2109, Australia
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3
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Derville S, Torres LG, Newsome SD, Somes CJ, Valenzuela LO, Vander Zanden HB, Baker CS, Bérubé M, Busquets-Vass G, Carlyon K, Childerhouse SJ, Constantine R, Dunshea G, Flores PAC, Goldsworthy SD, Graham B, Groch K, Gröcke DR, Harcourt R, Hindell MA, Hulva P, Jackson JA, Kennedy AS, Lundquist D, Mackay AI, Neveceralova P, Oliveira L, Ott PH, Palsbøll PJ, Patenaude NJ, Rowntree V, Sironi M, Vermeuelen E, Watson M, Zerbini AN, Carroll EL. Long-term stability in the circumpolar foraging range of a Southern Ocean predator between the eras of whaling and rapid climate change. Proc Natl Acad Sci U S A 2023; 120:e2214035120. [PMID: 36848574 PMCID: PMC10013836 DOI: 10.1073/pnas.2214035120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Accepted: 12/19/2022] [Indexed: 03/01/2023] Open
Abstract
Assessing environmental changes in Southern Ocean ecosystems is difficult due to its remoteness and data sparsity. Monitoring marine predators that respond rapidly to environmental variation may enable us to track anthropogenic effects on ecosystems. Yet, many long-term datasets of marine predators are incomplete because they are spatially constrained and/or track ecosystems already modified by industrial fishing and whaling in the latter half of the 20th century. Here, we assess the contemporary offshore distribution of a wide-ranging marine predator, the southern right whale (SRW, Eubalaena australis), that forages on copepods and krill from ~30°S to the Antarctic ice edge (>60°S). We analyzed carbon and nitrogen isotope values of 1,002 skin samples from six genetically distinct SRW populations using a customized assignment approach that accounts for temporal and spatial variation in the Southern Ocean phytoplankton isoscape. Over the past three decades, SRWs increased their use of mid-latitude foraging grounds in the south Atlantic and southwest (SW) Indian oceans in the late austral summer and autumn and slightly increased their use of high-latitude (>60°S) foraging grounds in the SW Pacific, coincident with observed changes in prey distribution and abundance on a circumpolar scale. Comparing foraging assignments with whaling records since the 18th century showed remarkable stability in use of mid-latitude foraging areas. We attribute this consistency across four centuries to the physical stability of ocean fronts and resulting productivity in mid-latitude ecosystems of the Southern Ocean compared with polar regions that may be more influenced by recent climate change.
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Affiliation(s)
- Solène Derville
- Marine Mammal Institute, Oregon State University, Newport, OR97365
- Unité Mixte de Recherche (UMR) Entropie, French Institute of Research for Sustainable Development, Nouméa98848, New Caledonia
| | - Leigh G. Torres
- Marine Mammal Institute, Oregon State University, Newport, OR97365
| | - Seth D. Newsome
- Biology Department, University of New Mexico, Albuquerque, NM87131-0001
| | | | - Luciano O. Valenzuela
- Consejo Nacional de Investigaciones Científicas y Técnicas, Laboratorio de Ecología Evolutiva Humana, Facultad de Ciencias Sociales de la Universidad Nacional del Centro de la Provincia de Buenos Aires (FACSO-UNCPBA), 7631Buenos Aires, Argentina
- Instituto de Conservación de Ballenas, Ing. Maschwitz, 1623 Buenos Aires, Argentina
- School of Biological Sciences, University of Utah, Salt Lake City, UT84112-0840
| | | | - C. Scott Baker
- Marine Mammal Institute, Oregon State University, Newport, OR97365
- Department of Fisheries, Wildlife and Conservation Sciences, Oregon State University, Corvallis, OR97365
| | - Martine Bérubé
- Marine Evolution and Conservation Group, Groningen Institute of Evolutionary Life Sciences, University of Groningen, 9747 AGGroningen, The Netherlands
- Centre for Coastal Studies, Provincetown, MA02657
| | - Geraldine Busquets-Vass
- Biology Department, University of New Mexico, Albuquerque, NM87131-0001
- Laboratorio de Macroecología Marina, Centro de Investigación Científica y Educación Superior de Ensenada, Unidad La Paz, 23050La Paz, BCS, México
| | - Kris Carlyon
- Department of Natural Resources and Environment Tasmania, Hobart7001, Australia
| | | | - Rochelle Constantine
- School of Biological Sciences, University of Auckland Waipapa Taumata Rau, Auckland1010, AotearoaNew Zealand
| | - Glenn Dunshea
- Ecological Marine Services Pty. Ltd., Bundaberg4670, QLD, Australia
- Department of Natural History, NTNU University Museum, Norwegian University of Science and Technology, 7491Trondheim, Norway
| | - Paulo A. C. Flores
- Núcleo de Gestão Integrada ICMBio Florianópolis, Instituto Chico Mendes de Conservação da Biodiversidade, Ministério do Meio Ambiente, Florianópolis88053-700, Brazil
| | - Simon D. Goldsworthy
- South Australian Research and Development Institute, Primary Industries and Regions South Australia, Adelaide, SA5064, Australia
- School of Earth and Environmental Sciences University of Adelaide, Adelaide, SA5064, Australia
| | - Brittany Graham
- Environmental Law Initiative, Wellington6011, AotearoaNew Zealand
| | - Karina Groch
- Instituto Australis, Imbituba, SC88780-000, Brazil
| | - Darren R. Gröcke
- Stable Isotope Biogeochemistry Laboratory, Department of Earth Sciences, Durham University, DurhamDH1 3LE, United Kingdom
| | - Robert Harcourt
- School of Natural Sciences, Macquarie University, Sydney, NSW2000, Australia
| | - Mark A. Hindell
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, TAS 7005, Australia
| | - Pavel Hulva
- Department of Zoology, Faculty of Science, Charles University, Prague116 36, Czech Republic
- Department of Biology and Ecology, Faculty of Science, University of Ostrava, Ostrava701 03, Czech Republic
| | | | - Amy S. Kennedy
- Cooperative Institute for Climate, Ecosystem and Ocean Studies, University of Washington & Marine Mammal Laboratory, Alaska Fisheries Science Center, National Oceanic and Atmospheric Administration (NOAA), Seattle, WA98112
| | - David Lundquist
- New Zealand Department of Conservation - Te Papa Atawhai, Wellington6011, AotearoaNew Zealand
| | - Alice I. Mackay
- South Australian Research and Development Institute, Primary Industries and Regions South Australia, Adelaide, SA5064, Australia
| | - Petra Neveceralova
- Department of Zoology, Faculty of Science, Charles University, Prague116 36, Czech Republic
- Ivanhoe Sea Safaris, Gansbaai7220, South Africa
- Dyer Island Conservation Trust, Great White House, Kleinbaai, Van Dyks Bay7220, South Africa
| | - Larissa Oliveira
- Grupo de Estudos de Mamíferos Aquáticos do Rio Grande do Sul, Torres, RS95560-000, Brazil
- Laboratório de Ecologia de Mamίferos, Universidade do Vale do Rio dos Sinos, Sao Leopoldo, RS93022-750, Brazil
| | - Paulo H. Ott
- Grupo de Estudos de Mamíferos Aquáticos do Rio Grande do Sul, Torres, RS95560-000, Brazil
- Universidade Estadual do Rio Grande do Sul, Osório, RS95520-000, Brazil
| | - Per J. Palsbøll
- Marine Evolution and Conservation Group, Groningen Institute of Evolutionary Life Sciences, University of Groningen, 9747 AGGroningen, The Netherlands
- Centre for Coastal Studies, Provincetown, MA02657
| | | | - Victoria Rowntree
- Instituto de Conservación de Ballenas, Ing. Maschwitz, 1623 Buenos Aires, Argentina
- School of Biological Sciences, University of Utah, Salt Lake City, UT84112-0840
- Ocean Alliance, Gloucester, MA01930
| | - Mariano Sironi
- Instituto de Conservación de Ballenas, Ing. Maschwitz, 1623 Buenos Aires, Argentina
- Diversidad Biológica IV, Universidad Nacional de Córdoba, CórdobaX5000HUA, Argentina
| | - Els Vermeuelen
- Mammal Research Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria0002, South Africa
| | - Mandy Watson
- Department of Environment, Land, Water and Planning, Warrnambool, VIC3280, Australia
| | - Alexandre N. Zerbini
- Cooperative Institute for Climate, Ecosystem and Ocean Studies, University of Washington & Marine Mammal Laboratory, Alaska Fisheries Science Center, National Oceanic and Atmospheric Administration (NOAA), Seattle, WA98112
- Marine Ecology and Telemetry Research & Cascadia Research Collective, Seabeck, WA98380
| | - Emma L. Carroll
- School of Biological Sciences, University of Auckland Waipapa Taumata Rau, Auckland1010, AotearoaNew Zealand
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Goodman K, Niella Y, Bliss‐Henaghan T, Harcourt R, Smoothey AF, Peddemors VM. Ontogenetic changes in the tooth morphology of bull sharks (Carcharhinus leucas). J Fish Biol 2022; 101:1033-1046. [PMID: 35848707 PMCID: PMC9804735 DOI: 10.1111/jfb.15170] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Accepted: 07/14/2022] [Indexed: 06/15/2023]
Abstract
Teeth are an integral component of feeding ecology, with a clear link between tooth morphology and diet, as without suitable dentition prey cannot be captured nor broken down for consumption. Bull sharks, Carcharhinus leucas, undergo an ontogenetic niche shift from freshwater to marine habitats, which raises the question: does tooth morphology change with ontogeny? Tooth shape, surface area and thickness were measured using both morphometrics and elliptic Fourier analysis to determine if morphology varied with position in the jaw and if there was an ontogenetic change concordant with this niche shift. Significant ontogenetic differences in tooth morphology as a function of position in the jaw and shark total length were found, with upper and lower jaws of bull sharks presenting two different tooth morphologies. Tooth shape and thickness fell into two groupings, anterior and posterior, in both the upper and lower jaws. Tooth surface area, however, indicated three groupings, mesial, intermediate and distal, in both the upper and lower jaws. While tooth morphology changed significantly with size, showing an inflection at sharks of 135 cm total length, each morphological aspect retained the same tooth groupings throughout. These ontogenetic differences in tooth morphologies reflect tooth strength, prey handling and heterodonty.
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Affiliation(s)
- Kyle Goodman
- School of Natural SciencesMacquarie UniversitySydneyNew South WalesAustralia
| | - Yuri Niella
- School of Natural SciencesMacquarie UniversitySydneyNew South WalesAustralia
| | | | - Robert Harcourt
- School of Natural SciencesMacquarie UniversitySydneyNew South WalesAustralia
| | - Amy F. Smoothey
- NSW Department of Primary Industries, Fisheries ResearchSydney Institute of Marine ScienceMosmanNew South WalesAustralia
| | - Victor M. Peddemors
- NSW Department of Primary Industries, Fisheries ResearchSydney Institute of Marine ScienceMosmanNew South WalesAustralia
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5
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Kliska K, McIntosh RR, Jonsen I, Hume F, Dann P, Kirkwood R, Harcourt R. Environmental correlates of temporal variation in the prey species of Australian fur seals inferred from scat analysis. R Soc Open Sci 2022; 9:211723. [PMID: 36249336 PMCID: PMC9532993 DOI: 10.1098/rsos.211723] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Accepted: 09/14/2022] [Indexed: 06/16/2023]
Abstract
Marine ecosystems in southeastern Australia are responding rapidly to climate change. We monitored the diet of the Australian fur seal (Arctocephalus pusillus doriferus), a key marine predator, over 17 years (1998-2014) to examine temporal changes. Frequency of occurrence (FO) of prey was used as a proxy for ecosystem change. Hard part analysis identified 71 prey taxa, with eight dominant taxa in greater than 70% of samples and predominantly included benthic and small pelagic fish. FO changed over time, e.g. redbait (Emmelichthys nitidus) reduced after 2005 when jack mackerel (Trachurus declivis) increased, and pilchard (Sardinops sajax) increased after 2009. Using generalized additive models, correlations between FO and environmental variables were evident at both the local (e.g. wind, sea surface temperature (SST)) and regional (e.g. El Niño-Southern Oscillation Index (SOI), Southern Annular Mode (SAM)) scales, with redbait and pilchard showing the best model fits (greater than 75% deviance explained). Positive SAM was correlated to FO for both species, and wind and season were important for redbait, while SOI and SST were important for pilchard. Both large-scale and regional processes influenced prey taxa in variable ways. We predict that the diverse and adaptable diet of the Australian fur seal will be advantageous in a rapidly changing ecosystem.
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Affiliation(s)
- Kimberley Kliska
- School of Natural Sciences, Macquarie University, Sydney, Australia
| | - Rebecca R. McIntosh
- School of Natural Sciences, Macquarie University, Sydney, Australia
- Research Department, Phillip Island Nature Parks, Victoria, Australia
| | - Ian Jonsen
- School of Natural Sciences, Macquarie University, Sydney, Australia
| | - Fiona Hume
- Research Department, Phillip Island Nature Parks, Victoria, Australia
| | - Peter Dann
- Research Department, Phillip Island Nature Parks, Victoria, Australia
| | - Roger Kirkwood
- Research Department, Phillip Island Nature Parks, Victoria, Australia
- South Australian Research and Development Institute, South Australia, Australia
| | - Robert Harcourt
- School of Natural Sciences, Macquarie University, Sydney, Australia
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6
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Phillips LR, Carroll G, Jonsen I, Harcourt R, Brierley AS, Wilkins A, Cox M. Variability in prey field structure drives inter-annual differences in prey encounter by a marine predator, the little penguin. R Soc Open Sci 2022; 9:220028. [PMID: 36117863 PMCID: PMC9470263 DOI: 10.1098/rsos.220028] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/10/2022] [Accepted: 08/26/2022] [Indexed: 06/15/2023]
Abstract
Understanding how marine predators encounter prey across patchy landscapes remains challenging due to difficulties in measuring the three-dimensional structure of pelagic prey fields at scales relevant to animal movement. We measured at-sea behaviour of a central-place forager, the little penguin (Eudyptula minor), over 5 years (2015-2019) using GPS and dive loggers. We made contemporaneous measurements of the prey field within the penguins' foraging range via boat-based acoustic surveys. We developed a prey encounter index by comparing estimates of acoustic prey density encountered along actual penguin tracks to those encountered along simulated penguin tracks with the same characteristics as real tracks but that moved randomly through the prey field. In most years, penguin tracks encountered prey better than simulated random movements greater than 99% of the time, and penguin dive depths matched peaks in the vertical distribution of prey. However, when prey was unusually sparse and/or deep, penguins had worse than random prey encounter indices, exhibited dives that mismatched depth of maximum prey density, and females had abnormally low body mass (5.3% lower than average). Reductions in prey encounters owing to decreases in the density or accessibility of prey may ultimately lead to reduced fitness and population declines in central-place foraging marine predators.
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Affiliation(s)
| | - Gemma Carroll
- School of Aquatic and Fisheries Sciences, University of Washington, WA, USA
- Resource Ecology and Fisheries Management Division, NOAA Alaska Fisheries Science Center, Seattle, WA USA
| | - Ian Jonsen
- Macquarie University, Sydney, NSW, Australia
| | | | - Andrew S. Brierley
- Pelagic Ecology Research Group, Scottish Oceans Institute, Gatty Marine Laboratory, School of Biology, University of St. Andrews, St Andrews, Scotland KY16 8LB, UK
| | - Adam Wilkins
- Field Friendly, 203 Channel Highway, Kingston, Tasmania 7050, Australia
| | - Martin Cox
- Pelagic Ecology Research Group, Scottish Oceans Institute, Gatty Marine Laboratory, School of Biology, University of St. Andrews, St Andrews, Scotland KY16 8LB, UK
- Australian Antarctic Division, 203 Channel Highway, Kingston, Tasmania 7050, Australia
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7
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Carroll EL, Riekkola L, Andrews-Goff V, Baker CS, Constantine R, Cole R, Goetz K, Harcourt R, Lundquist D, Meyer C, Ogle M, O’Rorke R, Patenaude N, Russ R, Stuck E, van der Reis AL, Zerbini AN, Childerhouse S. New Zealand southern right whale (Eubalaena australis; Tohorā nō Aotearoa) behavioural phenology, demographic composition, and habitat use in Port Ross, Auckland Islands over three decades: 1998–2021. Polar Biol 2022. [DOI: 10.1007/s00300-022-03076-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
AbstractChanges in habitat availability and prey abundance are predicted to adversely influence survival and reproduction of wildlife in the Southern Ocean. Some populations of southern right whale (SRW; Eubalaena australis) are showing dramatic changes in habitat use. Surveys were undertaken in the austral winters of 2020 and 2021 at the key nursery and socialising ground for New Zealand SRWs: Port Ross, Auckland Islands, with 548 encounters and 599 skin biopsy samples collected. Data from these two surveys spanned peak periods of use and were used to test the hypothesis there have been shifts in the phenology, demographic composition and behaviour of SRWs using the Auckland Islands over the past three decades. The behavioural phenology and demographic composition of SRW resembles that observed in the 1990s. In contrast, the proportion of groups containing cow-calf pairs increased from 20% in the 1998 survey to 50% in 2020/21. These changes are consistent with a growing population undergoing strong recruitment, not limited by food resources. Continued use of Port Ross by all SRW demographic classes confirms this as key habitat for SRW in New Zealand waters, and we support increased enforcement of existing management measures to reduce whale-vessel interactions in this remote subantarctic archipelago.
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8
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Salton M, Bestley S, Gales N, Harcourt R. Environmental drivers of foraging behaviour during long-distance foraging trips of male Antarctic fur seals. Anim Behav 2022. [DOI: 10.1016/j.anbehav.2021.11.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
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9
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Niella Y, Butcher P, Holmes B, Barnett A, Harcourt R. Correction to: Forecasting intraspecific changes in distribution of a wide-ranging marine predator under climate change. Oecologia 2021; 198:837. [PMID: 34921346 PMCID: PMC8956521 DOI: 10.1007/s00442-021-05092-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Yuri Niella
- Department of Biological Sciences, Macquarie University, North Ryde, Sydney, NSW, 2113, Australia.
| | - Paul Butcher
- NSW Department of Primary Industries, National Marine Science Centre, PO Box 4321, Coffs Harbour, NSW, 2450, Australia.,Southern Cross University, National Marine Science Centre, PO Box 4321, Coffs Harbour, NSW, 2450, Australia
| | - Bonnie Holmes
- School of Science, Technology and Engineering, University of the Sunshine Coast, Sippy Downs, QLD, 4556, Australia.,School of Biological Sciences, University of Queensland, St Lucia, Brisbane, QLD, 4067, Australia
| | - Adam Barnett
- College of Science and Engineering, James Cook University, Townsville, Australia.,Marine Data Technology Hub, James Cook University, Townsville, Australia.,Biopixel Oceans Foundation, Smithfield, Australia
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, North Ryde, Sydney, NSW, 2113, Australia
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10
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Niella Y, Peddemors VM, Green M, Smoothey AF, Harcourt R. A “Wicked Problem” Reconciling Human-Shark Conflict, Shark Bite Mitigation, and Threatened Species. Front Conserv Sci 2021. [DOI: 10.3389/fcosc.2021.720741] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
Abstract
Conservation measures often result in a “wicked problem,” i.e., a complex problem with conflicting aims and no clear or straightforward resolution without severe adverse effects on one or more parties. Here we discuss a novel approach to an ongoing problem, in which actions to reduce risk to humans, involve lethal control of otherwise protected species. To protect water users, nets are often used to catch potentially dangerous sharks at popular bathing beaches, yet in Australian waters one of the targeted species, the white shark (Carcharodon carcharias) is listed as Vulnerable, while bycatch includes the Critically Endangered grey nurse shark (Carcharias taurus). Recent, highly publicised, shark attacks have triggered demands for improved bather protection, whilst welfare and conservation organisations have called for removal of lethal measures. This leaves management and policy makers with a wicked problem: removing nets to reduce impacts on threatened species may increase risk to humans; or leaving the program as it is on the premise that the benefits provided by bather protection are greater than the impact on threatened and protected species. We used multivariate analysis and generalised additive models to investigate the biological, spatial-temporal, and environmental patterns influencing catch rates of threatened and of potentially dangerous shark species in the New South Wales shark nets over two decades to April 2019. Factors influencing catches were used to develop a matrix of potential changes to reduce catch of threatened species. Our proposed solutions include replacing existing nets with alternative mitigation strategies at key beaches where catch rate of threatened species is high. This approach provides stakeholders with a hierarchy of scenarios that address both social demands and threatened species conservation and is broadly applicable to human-wildlife conflict scenarios elsewhere.
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11
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Bilgmann K, Armansin N, Ferchaud A, Normandeau E, Bernatchez L, Harcourt R, Ahonen H, Lowther A, Goldsworthy S, Stow A. Low effective population size in the genetically bottlenecked Australian sea lion is insufficient to maintain genetic variation. Anim Conserv 2021. [DOI: 10.1111/acv.12688] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- K. Bilgmann
- Department of Biological Sciences Macquarie University Sydney Australia
| | - N. Armansin
- Department of Biological Sciences Macquarie University Sydney Australia
| | - A.L. Ferchaud
- Département de Biologie Institut de Biologie Intégrative et des Systèmes (IBIS) Université Laval Québec QC Canada
| | - E. Normandeau
- Département de Biologie Institut de Biologie Intégrative et des Systèmes (IBIS) Université Laval Québec QC Canada
| | - L. Bernatchez
- Département de Biologie Institut de Biologie Intégrative et des Systèmes (IBIS) Université Laval Québec QC Canada
| | - R. Harcourt
- Department of Biological Sciences Macquarie University Sydney Australia
| | - H. Ahonen
- Department of Biological Sciences Macquarie University Sydney Australia
- Norwegian Polar Institute Tromsø Norway
| | | | - S.D. Goldsworthy
- South Australian Research and Development Institute Adelaide South Australia
| | - A. Stow
- Department of Biological Sciences Macquarie University Sydney Australia
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12
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Salton M, Carr M, Tarjan LM, Clarke J, Kirkwood R, Slip D, Harcourt R. Protected area use by two sympatric marine predators repopulating their historical range. ENDANGER SPECIES RES 2021. [DOI: 10.3354/esr01129] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
As large carnivores recover from over-exploitation, managers often lack evidence-based information on species habitat requirements and the efficacy of management practices, particularly where species repopulate areas from which they have long been extirpated. We investigated the movement and habitat use by 2 semi-aquatic carnivores (Australian fur seals Arctocephalus pusillus doriferus and New Zealand fur seals A. forsteri) at the northern end of their distributions in Australia, where after a long absence both are recolonising their historic range. We also assessed male fur seal habitat use overlap with terrestrial and marine protected areas (PAs). While at the margin of the range during winter and early spring, the males remained inshore close to terrestrial sites and where interactions with humans often occur. From early spring, the males from the range margin showed uniform movement toward colonies in the core of the species’ range prior to their breeding seasons. This contrasts with males tracked from the core of the species’ range that returned periodically to colonies during the year, and highlights the importance of range-wide monitoring of a species to inform conservation planning. Habitat use by some males included over 90% of a marine PA at the margin of the species’ range. Most terrestrial haul-outs used were within terrestrial PAs, while sites not protected were on the margin of the range. Despite wide-ranging habits, their dependence on coastal sites, where human access and activities can be regulated and more readily enforced, suggests that terrestrial and marine PAs will continue to play an important role in managing the recovery of these fur seals.
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Affiliation(s)
- M Salton
- Department of Biological Sciences, Macquarie University, North Ryde, New South Wales 2109, Australia
- Australian Antarctic Division, Department of Agriculture, Water and Environment, Kingston, Tasmania 7050, Australia
| | - M Carr
- Department of Primary Industries, Jervis Bay Marine Park, New South Wales 2540, Australia
- Biodiversity Conservation Trust, Coffs Harbour, New South Wales 2450, Australia
| | - LM Tarjan
- Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, California 95064, USA
- San Francisco Bay Bird Observatory, 524 Valley Way, Milpitas, California 95035, USA
| | - J Clarke
- Department of Biological Sciences, Macquarie University, North Ryde, New South Wales 2109, Australia
| | - R Kirkwood
- Research Department, Phillip Island Nature Parks, Cowes, Victoria 3922, Australia
- SARDI Aquatic Sciences, West Beach, South Australia 5024, Australia
| | - D Slip
- Department of Biological Sciences, Macquarie University, North Ryde, New South Wales 2109, Australia
- Taronga Conservation Society Australia, Mosman, New South Wales 2088, Australia
| | - R Harcourt
- Department of Biological Sciences, Macquarie University, North Ryde, New South Wales 2109, Australia
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Niella Y, Raoult V, Gaston T, Peddemors VM, Harcourt R, Smoothey AF. Overcoming multi-year impacts of maternal isotope signatures using multi-tracers and fast turnover tissues in juvenile sharks. Chemosphere 2021; 269:129393. [PMID: 33383247 DOI: 10.1016/j.chemosphere.2020.129393] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Revised: 12/16/2020] [Accepted: 12/18/2020] [Indexed: 06/12/2023]
Abstract
Stable isotopes are often used to determine the ecological role of different age classes of animals, but particularly for young animals this approach may be compromised. During gestation and or incubation body tissues of the young are derived directly from the mother. In neonates or post hatching, there is a period of transformation as the young grow and forage independently, but during this period different organs will continue to reflect the maternal isotopic signature as a function of their turnover rate. How long this maternal hangover persists remains poorly understood. We applied a multi-tracer approach (δ15N, δ13C and δ34S) to stable isotope signatures in juvenile bull sharks (Carcharhinus leucas) up to 6.5 years post parturition. We found that maternal provisioning was detectable for up to 3.5 years after birth in muscle but only detectable in young-of-the-year for liver. Inclusion of sulphur revealed when maternal signatures disappeared from low-turnover tissue, while also identifying the spatial and trophic ecology patterns from fast-turnover tissue. These results reveal the importance of sampling fast turnover tissues to study the trophic ecology of juvenile elasmobranchs, and how the use of only δ15N and δ13C isotopes is likely to make maternal patterns more difficult to detect.
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Affiliation(s)
- Yuri Niella
- Department of Biological Sciences, Macquarie University, North Ryde, 2113, Sydney, New South Wales, Australia.
| | - Vincent Raoult
- School of Environmental and Life Sciences, University of Newcastle, Ourimbah, New South Wales, 2258, Australia
| | - Troy Gaston
- School of Environmental and Life Sciences, University of Newcastle, Ourimbah, New South Wales, 2258, Australia
| | - Victor M Peddemors
- NSW Department of Primary Industries, Fisheries Research, Sydney Institute of Marine Science, Mosman, 2088, Sydney, New South Wales, Australia
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, North Ryde, 2113, Sydney, New South Wales, Australia
| | - Amy F Smoothey
- NSW Department of Primary Industries, Fisheries Research, Sydney Institute of Marine Science, Mosman, 2088, Sydney, New South Wales, Australia
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14
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Huveneers C, Jaine FRA, Barnett A, Butcher PA, Clarke TM, Currey-Randall LM, Dwyer RG, Ferreira LC, Gleiss AC, Hoenner X, Ierodiaconou D, Lédée EJI, Meekan MG, Pederson H, Rizzari JR, van Ruth PD, Semmens JM, Taylor MD, Udyawer V, Walsh P, Heupel MR, Harcourt R. The power of national acoustic tracking networks to assess the impacts of human activity on marine organisms during the COVID-19 pandemic. Biol Conserv 2021; 256:108995. [PMID: 34580542 PMCID: PMC8457752 DOI: 10.1016/j.biocon.2021.108995] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Revised: 12/22/2020] [Accepted: 01/16/2021] [Indexed: 05/16/2023]
Abstract
COVID-19 restrictions have led to an unprecedented global hiatus in anthropogenic activities, providing a unique opportunity to assess human impact on biological systems. Here, we describe how a national network of acoustic tracking receivers can be leveraged to assess the effects of human activity on animal movement and space use during such global disruptions. We outline variation in restrictions on human activity across Australian states and describe four mechanisms affecting human interactions with the marine environment: 1) reduction in economy and trade changing shipping traffic; 2) changes in export markets affecting commercial fisheries; 3) alterations in recreational activities; and 4) decline in tourism. We develop a roadmap for the analysis of acoustic tracking data across various scales using Australia's national Integrated Marine Observing System (IMOS) Animal Tracking Facility as a case study. We illustrate the benefit of sustained observing systems and monitoring programs by assessing how a 51-day break in white shark (Carcharodon carcharias) cage-diving tourism due to COVID-19 restrictions affected the behaviour and space use of two resident species. This cessation of tourism activities represents the longest break since cage-diving vessels started day trips in this area in 2007. Long-term monitoring of the local environment reveals that the activity space of yellowtail kingfish (Seriola lalandi) was reduced when cage-diving boats were absent compared to periods following standard tourism operations. However, white shark residency and movements were not affected. Our roadmap is globally applicable and will assist researchers in designing studies to assess how anthropogenic activities can impact animal movement and distributions during regional, short-term through to major, unexpected disruptions like the COVID-19 pandemic.
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Affiliation(s)
- Charlie Huveneers
- Southern Shark Ecology Group, College of Science and Engineering, Flinders University, Adelaide, SA 5042, Australia
| | - Fabrice R A Jaine
- Integrated Marine Observing System (IMOS) Animal Tracking Facility, Sydney Institute of Marine Science, Mosman, NSW 2088, Australia
- Department of Biological Sciences, Macquarie University, North Ryde, NSW 2109, Australia
| | - Adam Barnett
- College of Science & Engineering James Cook University, Cairns, QLD, 4878, Australia
| | - Paul A Butcher
- NSW Department of Primary Industries, National Marine Science Centre, Coffs Harbour, NSW 2450, Australia
| | - Thomas M Clarke
- Southern Shark Ecology Group, College of Science and Engineering, Flinders University, Adelaide, SA 5042, Australia
| | | | - Ross G Dwyer
- Global Change Ecology Research Group, University of the Sunshine Coast, Maroochydore, QLD, Australia
| | | | - Adrian C Gleiss
- College of Science, Health, Engineering and Education, Murdoch University, Murdoch, WA 6150, Australia
- Centre for Sustainable Aquatic Ecosystems, Harry Butler Institute, Murdoch University, Murdoch, WA 6150, Australia
| | - Xavier Hoenner
- CSIRO Oceans and Atmosphere, CSIRO, Hobart, TAS 7000, Australia
| | - Daniel Ierodiaconou
- School of Life and Environmental Sciences, Centre for Integrative Ecology, Deakin University, Warrnambool, VIC 3280, Australia
| | - Elodie J I Lédée
- Fish Ecology and Conservation Physiology Laboratory, Department of Biology, Carleton University, Ottawa, ON K1S 5B6, Canada
| | - Mark G Meekan
- Australian Institute of Marine Science, Perth, WA 6009, Australia
| | | | - Justin R Rizzari
- School of Life and Environmental Sciences, Deakin University, Queenscliff, VIC, 3225, Australia
| | - Paul D van Ruth
- South Australian Research and Development Institute - Aquatic Sciences, West Beach, SA 5024, Australia
| | - Jayson M Semmens
- Fisheries and Aquaculture Centre, Institute for Marine and Antarctic Studies, University of Tasmania, Private Bag 49, Hobart, TAS 7001, Australia
| | - Matthew D Taylor
- Port Stephens Fisheries Institute, New South Wales Department of Primary Industries, Locked Bag 1, Nelson Bay, NSW 2315, Australia
| | - Vinay Udyawer
- Australian Institute of Marine Science, Darwin, NT 0810, Australia
| | - Peter Walsh
- Fisheries and Aquaculture Centre, Institute for Marine and Antarctic Studies, University of Tasmania, Private Bag 49, Hobart, TAS 7001, Australia
| | - Michelle R Heupel
- Integrated Marine Observing System (IMOS), University of Tasmania, Hobart, TAS 7000, Australia
| | - Robert Harcourt
- Integrated Marine Observing System (IMOS) Animal Tracking Facility, Sydney Institute of Marine Science, Mosman, NSW 2088, Australia
- Department of Biological Sciences, Macquarie University, North Ryde, NSW 2109, Australia
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15
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Hindell MA, McMahon CR, Jonsen I, Harcourt R, Arce F, Guinet C. Inter- and intrasex habitat partitioning in the highly dimorphic southern elephant seal. Ecol Evol 2021; 11:1620-1633. [PMID: 33613994 PMCID: PMC7882946 DOI: 10.1002/ece3.7147] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2020] [Revised: 11/25/2020] [Accepted: 12/02/2020] [Indexed: 01/15/2023] Open
Abstract
Partitioning resources is a key mechanism for avoiding intraspecific competition and maximizing individual energy gain. However, in sexually dimorphic species it is difficult to discern if partitioning is due to competition or the different resource needs of morphologically distinct individuals. In the highly dimorphic southern elephant seal, there are intersexual differences in habitat use; at Iles Kerguelen, males predominantly use shelf waters, while females use deeper oceanic waters. There are equally marked intrasexual differences, with some males using the nearby Kerguelen Plateau, and others using the much more distant Antarctic continental shelf (~2,000 km away). We used this combination of inter and intrasexual behavior to test two hypotheses regarding habitat partitioning in highly dimorphic species. (a) that intersexual differences in habitat use will not appear until the seals diverge in body size and (b) that some habitats have higher rates of energy return than others. In particular, that the Antarctic shelf would provide higher energy returns than the Kerguelen Shelf, to offset the greater cost of travel. We quantified the habitat use of 187 southern elephant seals (102 adult females and 85 subadult males). The seals in the two groups were the same size (~2.4 m) removing the confounding effect of body size. We found that the intersexual differences in habitat use existed before the divergence in body size. Also, we found that the amount of energy gained was the same in all of the major habitats. This suggests that the use of shelf habitats by males is innate, and a trade-off between the need to access the large benthic prey available on shelf waters, against the higher risk of predation there. Intrasexual differences in habitat use are another trade-off; although there are fewer predators on the Antarctic shelf, it is subject to considerable interannual fluctuations in sea-ice extent. In contrast, the Kerguelen Plateau presents more consistent foraging opportunities, but contains higher levels of predation. Habitat partitioning in this highly dimorphic species is therefore the result of complex interplay of life history strategies, environmental conditions and predation pressure.
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Affiliation(s)
- Mark A. Hindell
- Institute for Marine and Antarctic StudiesUniversity of TasmaniaHobartTasmaniaAustralia
| | - Clive R. McMahon
- Institute for Marine and Antarctic StudiesUniversity of TasmaniaHobartTasmaniaAustralia
- IMOS Animal Tagging, Sydney Institute of Marine ScienceMosmanNew South WalesAustralia
- Department of Biological SciencesMacquarie UniversityNorth Ryde, SydneyNew South WalesAustralia
| | - Ian Jonsen
- Department of Biological SciencesMacquarie UniversityNorth Ryde, SydneyNew South WalesAustralia
| | - Robert Harcourt
- IMOS Animal Tagging, Sydney Institute of Marine ScienceMosmanNew South WalesAustralia
- Department of Biological SciencesMacquarie UniversityNorth Ryde, SydneyNew South WalesAustralia
| | - Fernando Arce
- Institute for Marine and Antarctic StudiesUniversity of TasmaniaHobartTasmaniaAustralia
| | - Christophe Guinet
- Centre d’Etudes Biologiques de Chizé (CEBC)UMR 7372Université de la Rochelle‐CNRSVilliers en BoisFrance
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16
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Cooke SJ, Lennox RJ, Brownscombe JW, Iverson SJ, Whoriskey FG, Millspaugh JJ, Hussey NE, Crossin GT, Godley BJ, Harcourt R. A case for restoring unity between biotelemetry and bio-logging to enhance animal tracking research. Facets (Ott) 2021. [DOI: 10.1139/facets-2020-0112] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Monitoring animals with electronic tags is an increasingly important tool for fundamental and applied ecological research. Based on the size of the system under study, the ability to recapture the animal, and research medium (e.g., aerial, freshwater, saltwater, terrestrial), tags selected may either log data in memory (bio-logging), transmit it to a receiver or satellite (biotelemetry), or have a hybrid design. Over time, we perceive that user groups are diverging based on increasing use of technology specific terms, favouring either bio-logging or biotelemetry. It is crucial to ensure that a divide does not become entrenched in the community because it will likely hinder efforts to advance field and analytical methods and reduce accessibility of animal tracking with electronic tags to early-career and new researchers. We discuss the context for this emerging problem and the evidence that this is manifesting within the scientific community. Finally, we suggest how the animal tracking community may work to address this issue to maximize the benefits of information transfer and integration between users of the two technologies.
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Affiliation(s)
- Steven J. Cooke
- Fish Ecology and Conservation Physiology Laboratory, Department of Biology, Carleton University, 1125 Colonel By Drive, Ottawa, ON, K1S 5B6, Canada
| | - Robert J. Lennox
- Fish Ecology and Conservation Physiology Laboratory, Department of Biology, Carleton University, 1125 Colonel By Drive, Ottawa, ON, K1S 5B6, Canada
- NORCE Norwegian Research Centre, Laboratory for Freshwater Ecology and Inland Fisheries, Bergen, Norway
| | - Jacob W. Brownscombe
- Great Lakes Laboratory for Fisheries and Aquatic Sciences, Fisheries and Oceans Canada, Burlington, ON L7S 1A1, Canada
| | - Sara J. Iverson
- Ocean Tracking Network, Dalhousie University, 1355 Oxford St, Halifax, NS B3H 4J1, Canada
| | - Frederick G. Whoriskey
- Ocean Tracking Network, Dalhousie University, 1355 Oxford St, Halifax, NS B3H 4J1, Canada
| | - Joshua J. Millspaugh
- W.A. Franke College of Forestry and Conservation, Wildlife Biology Program, University of Montana, Missoula, MT 59812, USA
| | - Nigel E. Hussey
- Integrative Biology, University of Windsor, 401 Sunset Avenue, Windsor, ON N9B 3P4, Canada
| | - Glenn T. Crossin
- Department of Biology, Dalhousie University, 1355 Oxford St, Halifax, NS B3H 4J1, Canada
| | - Brendan J. Godley
- Centre for Ecology and Conservation, University of Exeter, Penryn Campus, Cornwall TR10 9FE, UK
- Environment and Sustainability Institute, University of Exeter, Penryn Campus, Cornwall TR10 9FE, UK
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, North Ryde, 2109 NSW, Australia
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Gil-Fernández M, Harcourt R, Towerton A, Newsome T, Milner HA, Sriram S, Gray N, Escobar-Lasso S, González-Cardoso VH, Carthey A. The canid pest ejector challenge: controlling urban foxes while keeping domestic dogs safe. Wildl Res 2021. [DOI: 10.1071/wr20078] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Abstract
ContextIt is widely recognised that red foxes (Vulpes vulpes) are abundant within urban areas; however, it is difficult to apply lethal control measures using poison baits in cities because of concerns about the safety of domestic pets, particularly dogs (Canis familiaris).
AimsWe tested canid pest ejectors (CPEs) as a potential method of fox control by measuring visitation and activation behaviour of foxes and other wildlife while assessing non-target risk to domestic dogs.
MethodsWe compared eight urban and eight peri-urban sites in Sydney, with half of the sites having restricted access for domestic dogs. We allocated five camera traps and ejectors per site. Through generalised linear mixed models, we compared the probability of ejector activation between foxes and dogs. We also assessed the relationship between dog visitation and distance to habitation and dog restrictions as measures of dog safety.
Key resultsBoth species of canids were equally likely to pull the ejector (P=0.26). As expected, dog visitation was significantly lower in sites with dog restrictions (P<0.001). However, it was not related to distance from habitation. Only two non-canid species were recorded pulling the ejector, suggesting high target-specificity for canids.
ConclusionsIn sites with dog restrictions, the risk of dog casualties from CPEs is minimal. However, distance from habitation does not increase dog safety, at least within 250m. The ejector is highly specific for canids.
ImplicationsWe provide specific recommendations for the design of a potential fox control program using CPEs in urban and peri-urban areas. The ejector may be a safe method for fox control in cities when deployed at places without domestic dogs.
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Ladds M, Rosen D, Gerlinsky C, Slip D, Harcourt R. Diving deep into trouble: the role of foraging strategy and morphology in adapting to a changing environment. Conserv Physiol 2020; 8:coaa111. [PMID: 34168880 PMCID: PMC8218901 DOI: 10.1093/conphys/coaa111] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2019] [Revised: 05/02/2020] [Accepted: 11/24/2020] [Indexed: 06/12/2023]
Abstract
Physiology places constraints on an animal's ability to forage and those unable to adapt to changing conditions may face increased challenges to reproduce and survive. As the global marine environment continues to change, small, air-breathing, endothermic marine predators such as otariids (fur seals and sea lions) and particularly females, who are constrained by central place foraging during breeding, may experience increased difficulties in successfully obtaining adequate food resources. We explored whether physiological limits of female otariids may be innately related to body morphology (fur seals vs sea lions) and/or dictate foraging strategies (epipelagic vs mesopelagic or benthic). We conducted a systematic review of the increased body of literature since the original reviews of Costa et al. (When does physiology limit the foraging behaviour of freely diving mammals? Int Congr Ser 2004;1275:359-366) and Arnould and Costa (Sea lions in drag, fur seals incognito: insights from the otariid deviants. In Sea Lions of the World Fairbanks. Alaska Sea Grant College Program, Alaska, USA, pp. 309-324, 2006) on behavioural (dive duration and depth) and physiological (total body oxygen stores and diving metabolic rates) parameters. We estimated calculated aerobic dive limit (cADL-estimated duration of aerobic dives) for species and used simulations to predict the proportion of dives that exceeded the cADL. We tested whether body morphology or foraging strategy was the primary predictor of these behavioural and physiological characteristics. We found that the foraging strategy compared to morphology was a better predictor of most parameters, including whether a species was more likely to exceed their cADL during a dive and the ratio of dive time to cADL. This suggests that benthic and mesopelagic divers are more likely to be foraging at their physiological capacity. For species operating near their physiological capacity (regularly exceeding their cADL), the ability to switch strategies is limited as the cost of foraging deeper and longer is disproportionally high, unless it is accompanied by physiological adaptations. It is proposed that some otariids may not have the ability to switch foraging strategies and so be unable adapt to a changing oceanic ecosystem.
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Affiliation(s)
- Monique Ladds
- Marine Ecosystems Team, Department of Conservation, Wellington 6011, New Zealand
- Marine Predator Research Group, Department of Biological Sciences,
Macquarie University, North Ryde 2113, Australia
| | - David Rosen
- Marine Mammal Research Unit, Institute for the Oceans and Fisheries,
University of British Columbia, Vancouver V6T 1Z4, Canada
| | - Carling Gerlinsky
- Marine Mammal Research Unit, Institute for the Oceans and Fisheries,
University of British Columbia, Vancouver V6T 1Z4, Canada
| | - David Slip
- Marine Predator Research Group, Department of Biological Sciences,
Macquarie University, North Ryde 2113, Australia
- Taronga Conservation Society Australia, Mosman 2088, Australia
| | - Robert Harcourt
- Marine Predator Research Group, Department of Biological Sciences,
Macquarie University, North Ryde 2113, Australia
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Niella Y, Flávio H, Smoothey AF, Aarestrup K, Taylor MD, Peddemors VM, Harcourt R. Refined Shortest Paths (RSP): Incorporation of topography in space use estimation from node‐based telemetry data. Methods Ecol Evol 2020. [DOI: 10.1111/2041-210x.13484] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yuri Niella
- Department of Biological Sciences Macquarie University Sydney NSW Australia
| | - Hugo Flávio
- National Institute of Aquatic Resources Technical University of Denmark Silkeborg Denmark
| | - Amy F. Smoothey
- NSW Department of Primary Industries Fisheries Research Sydney Institute of Marine Science Sydney NSW Australia
| | - Kim Aarestrup
- National Institute of Aquatic Resources Technical University of Denmark Silkeborg Denmark
| | - Matthew D. Taylor
- Port Stephens Fisheries Institute New South Wales Department of Primary Industries Taylors Beach NSW Australia
| | - Victor M. Peddemors
- NSW Department of Primary Industries Fisheries Research Sydney Institute of Marine Science Sydney NSW Australia
| | - Robert Harcourt
- Department of Biological Sciences Macquarie University Sydney NSW Australia
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20
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Majelantle TL, Ganswindt A, Jordaan RK, Slip DJ, Harcourt R, McIntyre T. Increased population density and behavioural flexibility of African clawless otters (Aonyx capensis) in specific anthropogenic environments. Urban Ecosyst 2020. [DOI: 10.1007/s11252-020-01068-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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21
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Mackay AI, Bailleul F, Carroll EL, Andrews-Goff V, Baker CS, Bannister J, Boren L, Carlyon K, Donnelly DM, Double M, Goldsworthy SD, Harcourt R, Holman D, Lowther A, Parra GJ, Childerhouse SJ. Correction: Satellite derived offshore migratory movements of southern right whales (Eubalaena australis) from Australian and New Zealand wintering grounds. PLoS One 2020; 15:e0235186. [PMID: 32555689 PMCID: PMC7302484 DOI: 10.1371/journal.pone.0235186] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022] Open
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Gil-Fernández M, Harcourt R, Newsome T, Towerton A, Carthey A. Adaptations of the red fox (Vulpes vulpes) to urban environments in Sydney, Australia. Journal of Urban Ecology 2020. [DOI: 10.1093/jue/juaa009] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
AbstractWith urban encroachment on wild landscapes accelerating globally, there is an urgent need to understand how wildlife is adapting to anthropogenic change. We compared the behaviour of the invasive red fox (Vulpes vulpes) at eight urban and eight peri-urban areas of Sydney, Australia. We observed fox behaviour around a lure and compared fox activity patterns to those of potential prey and to two domestic predators (dogs—Canis lupus familiaris and cats—Felis catus). We assessed the influence of site type, vegetation cover, and distance from habitation on fox behaviour, and compared the temporal activity patterns of urban and peri-urban red foxes. Urban red foxes were marginally more nocturnal than those in peri-urban areas (88% activity overlap). There was greater overlap of red fox activity patterns with introduced mammalian prey in urban areas compared with peri-urban areas (90% urban vs 84% peri-urban). Red fox temporal activity overlapped 78% with cats, but only 20% with dogs, across both site types. The high degree of overlap with cats and introduced mammalian prey is most likely explained by the nocturnal behaviour of these species, while pet dogs are generally kept in yards or indoors at night. The behavioural differences we documented by urban red foxes suggest they may adapt to human modifications and presence, by being more nocturnal and/or more confident in urban areas.
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Affiliation(s)
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia
| | - Thomas Newsome
- Faculty of Science, School of Life and Environmental Sciences, The University of Sydney, Rm 312, Heydon-Laurence Building A08, Sydney, NSW 2006, Australia
| | - Alison Towerton
- Senior Strategic Land Services Officer (MER), Greater Sydney Local Land Services, Sydney, NSW 2750, Australia
| | - Alexandra Carthey
- Department of Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia
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23
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Mackay AI, Bailleul F, Carroll EL, Andrews-Goff V, Baker CS, Bannister J, Boren L, Carlyon K, Donnelly DM, Double M, Goldsworthy SD, Harcourt R, Holman D, Lowther A, Parra GJ, Childerhouse SJ. Satellite derived offshore migratory movements of southern right whales (Eubalaena australis) from Australian and New Zealand wintering grounds. PLoS One 2020; 15:e0231577. [PMID: 32380516 PMCID: PMC7205476 DOI: 10.1371/journal.pone.0231577] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2019] [Accepted: 03/26/2020] [Indexed: 01/10/2023] Open
Abstract
Southern right whales (Eubalaena australis) migrate between Austral-winter calving and socialising grounds to offshore mid- to high latitude Austral-summer feeding grounds. In Australasia, winter calving grounds used by southern right whales extend from Western Australia across southern Australia to the New Zealand sub-Antarctic Islands. During the Austral-summer these whales are thought to migrate away from coastal waters to feed, but the location of these feeding grounds is only inferred from historical whaling data. We present new information on the satellite derived offshore migratory movements of six southern right whales from Australasian wintering grounds. Two whales were tagged at the Auckland Islands, New Zealand, and the remaining four at Australian wintering grounds, one at Pirates Bay, Tasmania, and three at Head of Bight, South Australia. The six whales were tracked for an average of 78.5 days (range: 29 to 150) with average individual distance of 38 km per day (range: 20 to 61 km). The length of individually derived tracks ranged from 645–6,381 km. Three likely foraging grounds were identified: south-west Western Australia, the Subtropical Front, and Antarctic waters, with the Subtropical Front appearing to be a feeding ground for both New Zealand and Australian southern right whales. In contrast, the individual tagged in Tasmania, from a sub-population that is not showing evidence of post-whaling recovery, displayed a distinct movement pattern to much higher latitude waters, potentially reflecting a different foraging strategy. Variable population growth rates between wintering grounds in Australasia could reflect fidelity to different quality feeding grounds. Unlike some species of baleen whale populations that show movement along migratory corridors, the new satellite tracking data presented here indicate variability in the migratory pathways taken by southern right whales from Australia and New Zealand, as well as differences in potential Austral summer foraging grounds.
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Affiliation(s)
- Alice I. Mackay
- South Australian Research and Development Institute, Primary Industries and Regions South Australia, Adelaide, South Australia, Australia
- * E-mail:
| | - Frédéric Bailleul
- South Australian Research and Development Institute, Primary Industries and Regions South Australia, Adelaide, South Australia, Australia
- School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia
| | - Emma L. Carroll
- School of Biological Sciences, University of Auckland, Auckland, New Zealand
- Sea Mammal Research Unit, Scottish Oceans Institute, University of St Andrews, Fife, Scotland
| | - Virginia Andrews-Goff
- Australian Antarctic Division, Australian Marine Mammal Centre, Kingston, Tasmania, Australia
| | - C. Scott Baker
- Hatfield Marine Science Center, Newport, Oregon, United States of America
| | - John Bannister
- Deceased, Western Australian Museum, Welshpool DC, Western Australia, Australia
| | - Laura Boren
- New Zealand Department of Conservation, Wellington, New Zealand
| | - Krisa Carlyon
- Marine Conservation Program, Tasmanian Department of Primary Industries, Parks, Water and Environment, Hobart, Tasmania, Australia
| | | | - Michael Double
- Australian Antarctic Division, Australian Marine Mammal Centre, Kingston, Tasmania, Australia
| | - Simon D. Goldsworthy
- South Australian Research and Development Institute, Primary Industries and Regions South Australia, Adelaide, South Australia, Australia
- School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales, Australia
| | - Dirk Holman
- Department of Environment & Water, Port Lincoln, South Australia, Australia
| | | | - Guido J. Parra
- Cetacean Ecology, Behaviour and Evolution Lab, Flinders University, Adelaide, South Australia, Australia
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24
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Lennox RJ, Harcourt R, Bennett JR, Davies A, Ford AT, Frey RM, Hayward MW, Hussey NE, Iverson SJ, Kays R, Kessel ST, Mcmahon C, Muelbert M, Murray TS, Nguyen VM, Pye JD, Roche DG, Whoriskey FG, Young N, Cooke SJ. A Novel Framework to Protect Animal Data in a World of Ecosurveillance. Bioscience 2020. [DOI: 10.1093/biosci/biaa035] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Abstract
Surveillance of animal movements using electronic tags (i.e., biotelemetry) has emerged as an essential tool for both basic and applied ecological research and monitoring. Advances in animal tracking are occurring simultaneously with changes to technology, in an evolving global scientific culture that increasingly promotes data sharing and transparency. However, there is a risk that misuse of biotelemetry data could increase the vulnerability of animals to human disturbance or exploitation. For the most part, telemetry data security is not a danger to animals or their ecosystems, but for some high-risk cases, as with species’ with high economic value or at-risk populations, available knowledge of their movements may promote active disturbance or worse, potential poaching. We suggest that when designing animal tracking studies it is incumbent on scientists to consider the vulnerability of their study animals to risks arising from the implementation of the proposed program, and to take preventative measures.
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Affiliation(s)
- Robert J Lennox
- Fish Ecology and Conservation Physiology Laboratory, Department of Biology, Carleton University, Ottawa, Ontario, Canada
- Laboratory for Freshwater Ecology and Inland Fisheries, part of the Norwegian Research Centre (NORCE), Bergen, Norway
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, North Ryde, New South Wales, Australia
| | - Joseph R Bennett
- Institute of Environmental and Interdisciplinary Science and the Department of Biology, Carleton University, Ottawa, Ontario, Canada
| | - Alasdair Davies
- Conservation Technology Unit of the Zoological Society of London, London, England
| | - Adam T Ford
- Department of Biology, University of British Columbia, Kelowna, British Columbia, Canada
| | - Remo M Frey
- Department of Management, Technology, and Economics, ETH Zurich, Zurich, Switzerland
| | - Matt W Hayward
- Centre for Conservation Ecology, Nelson Mandela University, Port Elizabeth, South Africa, with the College of Natural Sciences, Bangor University, Bangor, United Kingdom, and with the School of Environmental and Life Sciences, the University of Newcastle, Callaghan, New South Wales, Australia
| | - Nigel E Hussey
- Department of Biological Sciences, the University of Windsor, Windsor, Ontario, Canada
| | - Sara J Iverson
- Ocean Tracking Network, Dalhousie University, Halifax, Nova Scotia, Canada
- Department of Biology, Dalhousie University, Halifax, Nova Scotia, Canada
| | - Roland Kays
- Department of Forestry and Environmental Resources, North Carolina State University, and with the North Carolina Museum of Natural Sciences, both in Raleigh, North Carolina
| | - Steven T Kessel
- Daniel P. Haerther Center for Conservation and Research, the John G. Shedd Aquarium, Chicago, Illinois
| | - Clive Mcmahon
- Department of Biological Sciences, Macquarie University, North Ryde, New South Wales, Australia
| | - Monica Muelbert
- Instituto de Oceanografia, Rio Grande, Rio Grande de Sul, Brazil
| | - Taryn S Murray
- South African Institute for Aquatic Biodiversity, Grahamstown, South Africa
| | - Vivian M Nguyen
- Institute of Environmental and Interdisciplinary Science and the Department of Biology, Carleton University, Ottawa, Ontario, Canada
| | - Jonathan D Pye
- Ocean Tracking Network, Dalhousie University, Halifax, Nova Scotia, Canada
| | - Dominique G Roche
- Fish Ecology and Conservation Physiology Laboratory, Department of Biology, Carleton University, Ottawa, Ontario, Canada
- Institute of Biology, the University of Neuchâtel, Neuchâtel, Switzerland
| | - Frederick G Whoriskey
- Ocean Tracking Network, Dalhousie University, Halifax, Nova Scotia, Canada
- Department of Biology, Dalhousie University, Halifax, Nova Scotia, Canada
| | - Nathan Young
- Department of Sociology and Anthropology, University of Ottawa, Ottawa, Ontario, Canada
| | - Steven J Cooke
- Fish Ecology and Conservation Physiology Laboratory, Department of Biology, Carleton University, Ottawa, Ontario, Canada
- Institute of Environmental and Interdisciplinary Science and the Department of Biology, Carleton University, Ottawa, Ontario, Canada
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25
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McGowan J, Beaumont LJ, Smith RJ, Chauvenet ALM, Harcourt R, Atkinson SC, Mittermeier JC, Esperon-Rodriguez M, Baumgartner JB, Beattie A, Dudaniec RY, Grenyer R, Nipperess DA, Stow A, Possingham HP. Conservation prioritization can resolve the flagship species conundrum. Nat Commun 2020; 11:994. [PMID: 32094329 PMCID: PMC7040008 DOI: 10.1038/s41467-020-14554-z] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2019] [Accepted: 01/17/2020] [Indexed: 12/16/2022] Open
Abstract
Conservation strategies based on charismatic flagship species, such as tigers, lions, and elephants, successfully attract funding from individuals and corporate donors. However, critics of this species-focused approach argue it wastes resources and often does not benefit broader biodiversity. If true, then the best way of raising conservation funds excludes the best way of spending it. Here we show that this conundrum can be resolved, and that the flagship species approach does not impede cost-effective conservation. Through a tailored prioritization approach, we identify places containing flagship species while also maximizing global biodiversity representation (based on 19,616 terrestrial and freshwater species). We then compare these results to scenarios that only maximized biodiversity representation, and demonstrate that our flagship-based approach achieves 79-89% of our objective. This provides strong evidence that prudently selected flagships can both raise funds for conservation and help target where these resources are best spent to conserve biodiversity.
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Affiliation(s)
- Jennifer McGowan
- Department of Biological Sciences, Macquarie University, Macquarie Park, NSW, 2109, Australia.
- Centre for Biodiversity and Conservation Science, University of Queensland, St Lucia, QLD, 4072, Australia.
- The Nature Conservancy, Arlington, VA, USA.
| | - Linda J Beaumont
- Department of Biological Sciences, Macquarie University, Macquarie Park, NSW, 2109, Australia
| | - Robert J Smith
- Durrell Institute of Conservation and Ecology, School of Anthropology and Conservation, University of Kent, Canterbury, Kent, CT2 7NR, UK
| | - Alienor L M Chauvenet
- Centre for Biodiversity and Conservation Science, University of Queensland, St Lucia, QLD, 4072, Australia
- Environmental Futures Research Institute & School of Environment and Science, Griffith University, Southport, QLD, 4222, Australia
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, Macquarie Park, NSW, 2109, Australia
| | - Scott C Atkinson
- Centre for Biodiversity and Conservation Science, University of Queensland, St Lucia, QLD, 4072, Australia
- United Nations Development Programme (UNDP), New York, New York, USA
| | - John C Mittermeier
- School of Geography and Environment, Oxford University, South Parks Road, Oxford, OX1 3QY, UK
| | - Manuel Esperon-Rodriguez
- Department of Biological Sciences, Macquarie University, Macquarie Park, NSW, 2109, Australia
- Hawkesbury Institute for the Environment, Western Sydney University, Sydney, NSW, 2753, Australia
| | - John B Baumgartner
- Department of Biological Sciences, Macquarie University, Macquarie Park, NSW, 2109, Australia
- Centre of Excellence for Biosecurity Risk Analysis (CEBRA), School of BioSciences, University of Melbourne, Parkville, VIC, Australia
| | - Andrew Beattie
- Department of Biological Sciences, Macquarie University, Macquarie Park, NSW, 2109, Australia
| | - Rachael Y Dudaniec
- Department of Biological Sciences, Macquarie University, Macquarie Park, NSW, 2109, Australia
| | - Richard Grenyer
- School of Geography and Environment, Oxford University, South Parks Road, Oxford, OX1 3QY, UK
| | - David A Nipperess
- Department of Biological Sciences, Macquarie University, Macquarie Park, NSW, 2109, Australia
| | - Adam Stow
- Department of Biological Sciences, Macquarie University, Macquarie Park, NSW, 2109, Australia
| | - Hugh P Possingham
- Centre for Biodiversity and Conservation Science, University of Queensland, St Lucia, QLD, 4072, Australia
- The Nature Conservancy, Arlington, VA, USA
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26
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Lahoz-Monfort JJ, Chadès I, Davies A, Fegraus E, Game E, Guillera-Arroita G, Harcourt R, Indraswari K, McGowan J, Oliver JL, Refisch J, Rhodes J, Roe P, Rogers A, Ward A, Watson DM, Watson JEM, Wintle BA, Joppa L. A Call for International Leadership and Coordination to Realize the Potential of Conservation Technology. Bioscience 2019. [DOI: 10.1093/biosci/biz090] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023] Open
Abstract
AbstractAdvancing technology represents an unprecedented opportunity to enhance our capacity to conserve the Earth's biodiversity. However, this great potential is failing to materialize and rarely endures. We contend that unleashing the power of technology for conservation requires an internationally coordinated strategy that connects the conservation community and policy-makers with technologists. We argue an international conservation technology entity could (1) provide vision and leadership, (2) coordinate and deliver key services necessary to ensure translation from innovation to effective deployment and use of technology for on-the-ground conservation across the planet, and (3) help integrate innovation into biodiversity conservation policy from local to global scales, providing tools to monitor outcomes of conservation action and progress towards national and international biodiversity targets. This proposed entity could take the shape of an international alliance of conservation institutions or a formal intergovernmental institution. Active and targeted uptake of emerging technology can help society achieve biodiversity conservation goals.
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Affiliation(s)
- José J Lahoz-Monfort
- School of BioSciences, The University of Melbourne, Parkville, VIC 3010, Australia
| | | | - Alasdair Davies
- Zoological Society of London, Regent's Park, London, NW1 4RY, United Kingdom
| | - Eric Fegraus
- 2011 Crystal Drive, Suite 600, Arlington, VA 22202 United Kingdom
| | - Edward Game
- The Nature Conservancy, South Brisbane, QLD 4101, Australia
| | | | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, North Ryde, NSW, 2109, Australia
| | - Karlina Indraswari
- School of Electrical Engineering and Computer Science, Queensland University of Technology, Brisbane, QLD, 4066, Australia
| | - Jennifer McGowan
- The Nature Conservancy, South Brisbane, QLD 4101, Australia
- Department of Biological Sciences, Macquarie University, North Ryde, NSW, 2109, Australia
- Centre of Excellence for Environmental Decisions, School of Biological Sciences, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Jessica L Oliver
- School of Electrical Engineering and Computer Science, Queensland University of Technology, Brisbane, QLD, 4066, Australia
| | - Johannes Refisch
- School of BioSciences, The University of Melbourne, Parkville, VIC 3010, Australia
- Centre of Excellence for Environmental Decisions, School of Biological Sciences, The University of Queensland, Brisbane, QLD 4072, Australia
- Great Apes Survival Partnership, UN Environment, P.O. Box 30552, 00100 Nairobi, Kenya
| | - Jonathan Rhodes
- School of Earth and Environmental Sciences, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Paul Roe
- School of Electrical Engineering and Computer Science, Queensland University of Technology, Brisbane, QLD, 4066, Australia
| | - Alex Rogers
- Department of Computer Science, University of Oxford, Oxford, United Kingdom
| | - Adrian Ward
- Wentworth Group of Concerned Scientists, 95 Pitt St, Sydney NSW 2000, Australia
| | - David M Watson
- Institute for Land, Water and Society, Charles Sturt University, Albury, NSW, Australia
| | - James E M Watson
- School of BioSciences, The University of Melbourne, Parkville, VIC 3010, Australia
- School of Earth and Environmental Sciences, The University of Queensland, Brisbane, QLD 4072, Australia
- Wildlife Conservation Society, Global Conservation Program, Bronx NY 10460, United States
| | - Brendan A Wintle
- School of BioSciences, The University of Melbourne, Parkville, VIC 3010, Australia
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27
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Sequeira AMM, Heupel MR, Lea MA, Eguíluz VM, Duarte CM, Meekan MG, Thums M, Calich HJ, Carmichael RH, Costa DP, Ferreira LC, Fernandéz-Gracia J, Harcourt R, Harrison AL, Jonsen I, McMahon CR, Sims DW, Wilson RP, Hays GC. The importance of sample size in marine megafauna tagging studies. Ecol Appl 2019; 29:e01947. [PMID: 31183944 DOI: 10.1002/eap.1947] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2018] [Revised: 04/10/2019] [Accepted: 04/17/2019] [Indexed: 06/09/2023]
Abstract
Telemetry is a key, widely used tool to understand marine megafauna distribution, habitat use, behavior, and physiology; however, a critical question remains: "How many animals should be tracked to acquire meaningful data sets?" This question has wide-ranging implications including considerations of statistical power, animal ethics, logistics, and cost. While power analyses can inform sample sizes needed for statistical significance, they require some initial data inputs that are often unavailable. To inform the planning of telemetry and biologging studies of marine megafauna where few or no data are available or where resources are limited, we reviewed the types of information that have been obtained in previously published studies using different sample sizes. We considered sample sizes from one to >100 individuals and synthesized empirical findings, detailing the information that can be gathered with increasing sample sizes. We complement this review with simulations, using real data, to show the impact of sample size when trying to address various research questions in movement ecology of marine megafauna. We also highlight the value of collaborative, synthetic studies to enhance sample sizes and broaden the range, scale, and scope of questions that can be answered.
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Affiliation(s)
- A M M Sequeira
- IOMRC and The University of Western Australia Oceans Institute, School of Biological Sciences, University of Western Australia, 35 Stirling Highway, Crawley, Western Australia, 6009, Australia
| | - M R Heupel
- Australian Institute of Marine Science, PMB No 3, Townsville, Queensland, 4810, Australia
| | - M-A Lea
- Institute for Marine and Antarctic Studies, University of Tasmania, 20 Castray Esplanade, Hobart, Tasmania, 7000, Australia
| | - V M Eguíluz
- Instituto de Física Interdisciplinar y Sistemas Complejos IFISC (CSIC - UIB), E-07122, Palma de Mallorca, Spain
| | - C M Duarte
- Red Sea Research Centre (RSRC), King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - M G Meekan
- Australian Institute of Marine Science, Indian Ocean Marine Research Centre (M096), University of Western Australia, 35 Stirling Highway, Crawley, Western Australia, 6009 Australia
| | - M Thums
- Australian Institute of Marine Science, Indian Ocean Marine Research Centre (M096), University of Western Australia, 35 Stirling Highway, Crawley, Western Australia, 6009 Australia
| | - H J Calich
- IOMRC and The University of Western Australia Oceans Institute, Oceans Graduate School, University of Western Australia, 35 Stirling Highway, Crawley, Western Australia, 6009, Australia
| | - R H Carmichael
- Dauphin Island Sea Lab and, University of South Alabama, 101 Bienville Boulevard, Dauphin Island, Alabama, 36528, USA
| | - D P Costa
- Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, California, 95060, USA
| | - L C Ferreira
- Australian Institute of Marine Science, Indian Ocean Marine Research Centre (M096), University of Western Australia, 35 Stirling Highway, Crawley, Western Australia, 6009 Australia
| | - J Fernandéz-Gracia
- Instituto de Física Interdisciplinar y Sistemas Complejos IFISC (CSIC - UIB), E-07122, Palma de Mallorca, Spain
| | - R Harcourt
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales, 2109, Australia
| | - A-L Harrison
- Migratory Bird Center, Smithsonian Conservation Biology Institute, National Zoological Park, PO Box 37012 MRC 5503 MBC, Washington, D.C., 20013, USA
| | - I Jonsen
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales, 2109, Australia
| | - C R McMahon
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales, 2109, Australia
- Sydney Institute of Marine Science, 19 Chowder Bay Road, Mosman, 2088, New South Wales, Australia
| | - D W Sims
- Marine Biological Association of the United Kingdom, The Laboratory, Citadel Hill, Plymouth, PL1 2PB, United Kingdom
- Ocean and Earth Science, National Oceanography Centre Southampton, Waterfront Campus, University of Southampton, Southampton, SO14 3ZH, United Kingdom
| | - R P Wilson
- Department of Biosciences, Swansea University, Swansea, United Kingdom
| | - G C Hays
- Deakin University, Geelong, Victoria, Australia
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28
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Hays GC, Bailey H, Bograd SJ, Bowen WD, Campagna C, Carmichael RH, Casale P, Chiaradia A, Costa DP, Cuevas E, Nico de Bruyn PJ, Dias MP, Duarte CM, Dunn DC, Dutton PH, Esteban N, Friedlaender A, Goetz KT, Godley BJ, Halpin PN, Hamann M, Hammerschlag N, Harcourt R, Harrison AL, Hazen EL, Heupel MR, Hoyt E, Humphries NE, Kot CY, Lea JSE, Marsh H, Maxwell SM, McMahon CR, Notarbartolo di Sciara G, Palacios DM, Phillips RA, Righton D, Schofield G, Seminoff JA, Simpfendorfer CA, Sims DW, Takahashi A, Tetley MJ, Thums M, Trathan PN, Villegas-Amtmann S, Wells RS, Whiting SD, Wildermann NE, Sequeira AMM. Translating Marine Animal Tracking Data into Conservation Policy and Management. Trends Ecol Evol 2019; 34:459-473. [PMID: 30879872 DOI: 10.1016/j.tree.2019.01.009] [Citation(s) in RCA: 102] [Impact Index Per Article: 20.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2018] [Revised: 01/21/2019] [Accepted: 01/22/2019] [Indexed: 11/18/2022]
Abstract
There have been efforts around the globe to track individuals of many marine species and assess their movements and distribution, with the putative goal of supporting their conservation and management. Determining whether, and how, tracking data have been successfully applied to address real-world conservation issues is, however, difficult. Here, we compile a broad range of case studies from diverse marine taxa to show how tracking data have helped inform conservation policy and management, including reductions in fisheries bycatch and vessel strikes, and the design and administration of marine protected areas and important habitats. Using these examples, we highlight pathways through which the past and future investment in collecting animal tracking data might be better used to achieve tangible conservation benefits.
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Affiliation(s)
| | - Helen Bailey
- Chesapeake Biological Laboratory, University of Maryland Center for Environmental Science, Solomons, MD 20688, USA
| | - Steven J Bograd
- NOAA Southwest Fisheries Science Center, Environmental Research Division, Monterey, CA 93940, USA
| | - W Don Bowen
- Population Ecology Division, Bedford Institute of Oceanography, Dartmouth, NS B2Y 4A2, Canada
| | - Claudio Campagna
- Wildlife Conservation Society, Marine Program, Buenos Aires, 1414 Argentina
| | - Ruth H Carmichael
- University Programs, Dauphin Island Sea Lab, Dauphin Island, AL 36528, USA; Department of Marine Sciences, University of South Alabama, Mobile, AL 36688, USA
| | - Paolo Casale
- Department of Biology, University of Pisa, Pisa, Italy
| | - Andre Chiaradia
- Conservation Department, Phillip Island, Nature Parks, Victoria, Australia
| | - Daniel P Costa
- Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, CA 95060, USA
| | - Eduardo Cuevas
- CONACYT - Research Center of Environmental Sciences, Faculty of Natural Sciences, Universidad Autonoma del Carmen, Campeche 24180, Mexico; Pronatura Peninsula de Yucatan, Yucatan 97205, Mexico
| | - P J Nico de Bruyn
- Mammal Research Institute, Department of Zoology & Entomology, University of Pretoria, Hatfield 0028, South Africa
| | - Maria P Dias
- BirdLife International, Cambridge CB2 3QZ, UK; MARE - Marine and Environmental Sciences Center, ISPA - Instituto Universitário, 1149-041 Lisboa, Portugal
| | - Carlos M Duarte
- King Abdullah University of Science and Technology (KAUST), Red Sea Research Center (RSRC), Thuwal, 23955-6900, Saudi Arabia
| | - Daniel C Dunn
- Marine Geospatial Ecology Lab, Nicholas School of the Environment, Duke University, Durham, NC, USA
| | - Peter H Dutton
- Marine Mammal and Turtle Division, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, La Jolla, CA 92037, USA
| | - Nicole Esteban
- Department of Biosciences, Swansea University, Swansea SA2 8PP, Wales, UK
| | - Ari Friedlaender
- Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, CA 95060, USA; Institute for Marine Sciences, University of California Santa Cruz, Santa Cruz, CA 965060, USA
| | - Kimberly T Goetz
- National Institute of Water & Atmospheric Research Ltd (NIWA),Greta Point, Wellington, New Zealand
| | - Brendan J Godley
- Marine Turtle Research Group, Centre for Ecology and Conservation, School of Biosciences, University of Exeter, Cornwall Campus, Penryn TR10 9EZ, UK
| | - Patrick N Halpin
- Marine Geospatial Ecology Lab, Nicholas School of the Environment, Duke University, Durham, NC, USA
| | - Mark Hamann
- College of Science and Engineering, James Cook University, Townsville, QLD 4811, Australia
| | - Neil Hammerschlag
- Rosenstiel School of Marine & Atmospheric Science, Abess Center for Ecosystem Science & Policy, University of Miami, Miami, FL 33149, USA
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia
| | - Autumn-Lynn Harrison
- Migratory Bird Center, Smithsonian Conservation Biology Institute, Washington, DC 20008, USA
| | - Elliott L Hazen
- NOAA Southwest Fisheries Science Center, Environmental Research Division, Monterey, CA 93940, USA
| | - Michelle R Heupel
- Australian Institute of Marine Science, Townsville, QLD 4810, Australia
| | - Erich Hoyt
- Whale and Dolphin Conservation, Bridport, Dorset, UK; IUCN Joint SSC/WCPA Marine Mammal Protected Areas Task Force, Gland, Switzerland
| | - Nicolas E Humphries
- Marine Biological Association of the United Kingdom, The Laboratory, Plymouth PL1 2PB, UK
| | - Connie Y Kot
- Marine Geospatial Ecology Lab, Nicholas School of the Environment, Duke University, Durham, NC, USA
| | - James S E Lea
- Department of Zoology, University of Cambridge, Cambridge, UK
| | - Helene Marsh
- College of Science and Engineering, James Cook University, Townsville, QLD 4811, Australia
| | - Sara M Maxwell
- School of Interdisciplinary Arts and Sciences, University of Washington, Bothell Campus, Bothell, WA 98011, USA
| | - Clive R McMahon
- Department of Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia; Ecology and Biodiversity Centre, Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, TAS 7004, Australia; Sydney Institute of Marine Science, Mosman, NSW 2088, Australia
| | - Giuseppe Notarbartolo di Sciara
- Tethys Research Institute, 20121 Milano, Italy; IUCN Joint SSC/WCPA Marine Mammal Protected Areas Task Force, Gland, Switzerland
| | - Daniel M Palacios
- Marine Mammal Institute and Department of Fisheries and Wildlife, Oregon State University, Newport, OR 97365, USA
| | - Richard A Phillips
- British Antarctic Survey, Natural Environment Research Council, Cambridge, CB3 0ET, UK
| | - David Righton
- Cefas Laboratory, Suffolk, NR33 0HT, UK; School of Environmental Sciences, University of East Anglia, Norwich, NR4 7TJ, UK
| | - Gail Schofield
- School of Biological and Chemical Sciences, Queen Mary University of London, E14NS, London, UK
| | - Jeffrey A Seminoff
- Marine Turtle Ecology and Assessment Program, NOAA-Southwest Fisheries Science Center, La Jolla, CA 92037, USA
| | - Colin A Simpfendorfer
- College of Science and Engineering, James Cook University, Townsville, QLD 4811, Australia
| | - David W Sims
- Marine Biological Association of the United Kingdom, The Laboratory, Plymouth PL1 2PB, UK; Ocean and Earth Science, National Oceanography Centre Southampton, University of Southampton, Waterfront Campus, Southampton, SO14 3ZH, UK; Centre for Biological Sciences, Building 85, University of Southampton, Highfield Campus, Southampton, SO17 1BJ, UK
| | - Akinori Takahashi
- National Institute of Polar Research, Tachikawa, Tokyo 190-8518, Japan
| | - Michael J Tetley
- IUCN Joint SSC/WCPA Marine Mammal Protected Areas Task Force, Gland, Switzerland
| | - Michele Thums
- Australian Institute of Marine Science, Indian Ocean Marine Research Centre (M096), University of Western Australia, Crawley, WA 6009, Australia
| | - Philip N Trathan
- IUCN Joint SSC/WCPA Marine Mammal Protected Areas Task Force, Gland, Switzerland
| | - Stella Villegas-Amtmann
- Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, CA 95060, USA
| | - Randall S Wells
- Chicago Zoological Society's Sarasota Dolphin Research Program, c/o Mote Marine Laboratory, Sarasota, FL 34236, USA
| | - Scott D Whiting
- Marine Science Program, Department of Biodiversity, Conservation, and Attractions, Kensington, WA 6151, Australia
| | - Natalie E Wildermann
- Marine Turtle Research, Ecology and Conservation Group, Department of Earth, Ocean and Atmospheric, Science, Florida State University, Tallahassee, FL 32306-4320, USA
| | - Ana M M Sequeira
- IOMRC and The University of Western Australia Oceans Institute, School of Biological Sciences, University of Western Australia, Crawley, WA 6009, Australia
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29
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Jonsen ID, McMahon CR, Patterson TA, Auger‐Méthé M, Harcourt R, Hindell MA, Bestley S. Movement responses to environment: fast inference of variation among southern elephant seals with a mixed effects model. Ecology 2018; 100:e02566. [DOI: 10.1002/ecy.2566] [Citation(s) in RCA: 92] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/03/2018] [Revised: 10/24/2018] [Accepted: 11/13/2018] [Indexed: 01/20/2023]
Affiliation(s)
- I. D. Jonsen
- Department of Biological Sciences Macquarie University North Ryde, Sydney New South Wales 2109 Australia
| | - C. R. McMahon
- Sydney Institute of Marine Science Mosman New South Wales 2088 Australia
| | - T. A. Patterson
- CSIRO Marine and Atmospheric Research Hobart Tasmania 7004 Australia
| | - M. Auger‐Méthé
- Department of Statistics and Institute for the Oceans & Fisheries University of British Columbia Vancouver British Columbia V1V 1V7 Canada
| | - R. Harcourt
- Department of Biological Sciences Macquarie University North Ryde, Sydney New South Wales 2109 Australia
| | - M. A. Hindell
- Institute for Marine and Antarctic Studies University of Tasmania Hobart Tasmania 7004 Australia
| | - S. Bestley
- Institute for Marine and Antarctic Studies University of Tasmania Hobart Tasmania 7004 Australia
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30
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Wierucka K, Pitcher BJ, Harcourt R, Charrier I. Multimodal mother–offspring recognition: the relative importance of sensory cues in a colonial mammal. Anim Behav 2018. [DOI: 10.1016/j.anbehav.2018.10.019] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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31
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Wierucka K, Pitcher BJ, Harcourt R, Charrier I. The role of visual cues in mother-pup reunions in a colonially breeding mammal. Biol Lett 2018; 13:rsbl.2017.0444. [PMID: 29093175 DOI: 10.1098/rsbl.2017.0444] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Accepted: 10/12/2017] [Indexed: 11/12/2022] Open
Abstract
Parental care is an important factor influencing offspring survival and adult reproductive success in many vertebrates. Parent-offspring recognition ensures care is only directed to filial young, avoiding the costs of misallocated resource transfer. It is essential in colonial mammal species, such as otariids (fur seals and sea lions), in which repeated mother-offspring separations increase the risk of misdirecting maternal effort. Identification of otariid pups by mothers is known to be multi-modal, yet the role of visual cues in this process remains uncertain. We used three-dimensional visual models to investigate the importance of visual cues in maternal recognition of pups in Australian sea lions (Neophoca cinerea). We showed that the colour pattern of pup pelage in the absence of any other sensory cues served to attract the attention of females and prompt investigation. Furthermore, females were capable of accurately distinguishing between models imitating the age-class of their own pup and those resembling older or younger age-classes. Our results suggest that visual cues facilitate age-class discrimination of pups by females and so are likely to play an important role in mother-pup reunions and recognition in otariid species.
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Affiliation(s)
- Kaja Wierucka
- Department of Biological Sciences, Macquarie University, 2109 NSW, Australia .,Institut des Neurosciences Paris-Saclay, Université Paris-Saclay, CNRS (UMR 9197), Université Paris-Sud, 91405 Orsay, France
| | - Benjamin J Pitcher
- Department of Biological Sciences, Macquarie University, 2109 NSW, Australia.,Taronga Conservation Society Australia, Mosman, 2088 NSW, Australia
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, 2109 NSW, Australia
| | - Isabelle Charrier
- Institut des Neurosciences Paris-Saclay, Université Paris-Saclay, CNRS (UMR 9197), Université Paris-Sud, 91405 Orsay, France
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32
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Carroll G, Harcourt R, Pitcher BJ, Slip D, Jonsen I. Recent prey capture experience and dynamic habitat quality mediate short-term foraging site fidelity in a seabird. Proc Biol Sci 2018; 285:rspb.2018.0788. [PMID: 30051866 DOI: 10.1098/rspb.2018.0788] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2018] [Accepted: 06/28/2018] [Indexed: 11/12/2022] Open
Abstract
Foraging site fidelity allows animals to increase their efficiency by returning to profitable feeding areas. However, the mechanisms underpinning why animals 'stay' or 'switch' sites have rarely been investigated. Here, we explore how habitat quality and prior prey capture experience influence short-term site fidelity by the little penguin (Eudyptula minor). Using 88 consecutive foraging trips by 20 brooding penguins, we found that site fidelity was higher after foraging trips where environmental conditions were favourable, and after trips where prey capture success was high. When penguins exhibited lower site fidelity, the number of prey captures relative to the previous trip increased, suggesting that switches in foraging location were an adaptive strategy in response to low prey capture rates. Penguins foraged closer to where other penguins foraged on the same day than they did to the location of their own previous foraging site, and caught more prey when they foraged close together. This suggests that penguins aggregated flexibly when prey was abundant and accessible. Our results illustrate how foraging predators can integrate information about prior experience with contemporary information such as social cues. This gives insight into how animals combine information adaptively to exploit changing prey distribution in a dynamic environment.
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Affiliation(s)
- Gemma Carroll
- Department of Biological Sciences, Faculty of Science and Engineering, Macquarie University, Herring Rd, North Ryde, New South Wales 2109, Australia .,Institute of Marine Science, University of California Santa Cruz, Santa Cruz, CA 95064, USA
| | - Robert Harcourt
- Department of Biological Sciences, Faculty of Science and Engineering, Macquarie University, Herring Rd, North Ryde, New South Wales 2109, Australia
| | - Benjamin J Pitcher
- Department of Biological Sciences, Faculty of Science and Engineering, Macquarie University, Herring Rd, North Ryde, New South Wales 2109, Australia.,Taronga Conservation Society Australia, Bradley's Head Rd, Mosman, New South Wales 2088, Australia
| | - David Slip
- Taronga Conservation Society Australia, Bradley's Head Rd, Mosman, New South Wales 2088, Australia
| | - Ian Jonsen
- Department of Biological Sciences, Faculty of Science and Engineering, Macquarie University, Herring Rd, North Ryde, New South Wales 2109, Australia
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33
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Wierucka K, Charrier I, Harcourt R, Pitcher BJ. Visual cues do not enhance sea lion pups' response to multimodal maternal cues. Sci Rep 2018; 8:9845. [PMID: 29959365 PMCID: PMC6026155 DOI: 10.1038/s41598-018-28171-w] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2018] [Accepted: 06/13/2018] [Indexed: 11/30/2022] Open
Abstract
Mammals use multiple sensory cues for mother-offspring recognition. While the role of single sensory cues has been well studied, we lack information about how multiple cues produced by mothers are integrated by their offspring. Knowing that Australian sea lion (Neophoca cinerea) pups recognise their mother’s calls, we first tested whether visual cues are used by pups to discriminate between conspecifics of different age classes (adult female vs pup). We then examined if adding a visual stimulus to an acoustic cue enhances vocal responsiveness of Australian sea lion pups, by presenting wild individuals with either a visual cue (female 3D-model), an acoustic cue (mother’s call), or both simultaneously, and observing their reaction. We showed that visual cues can be used by pups to distinguish adult females from other individuals, however we found no enhancement effect of these cues on the response in a multimodal scenario. Audio-only cues prompted a similar reaction to audio-visual cues that was significantly stronger than pup response to visual-only cues. Our results suggest that visual cues are dominated by acoustic cues and that pups rely on the latter in mother recognition.
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Affiliation(s)
- Kaja Wierucka
- Department of Biological Sciences, Macquarie University, Sydney, 2109, NSW, Australia. .,Institut des Neurosciences Paris-Saclay, Université Paris-Saclay, CNRS (UMR 9197), Université Paris-Sud, Orsay, 91405, France.
| | - Isabelle Charrier
- Institut des Neurosciences Paris-Saclay, Université Paris-Saclay, CNRS (UMR 9197), Université Paris-Sud, Orsay, 91405, France
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, Sydney, 2109, NSW, Australia
| | - Benjamin J Pitcher
- Department of Biological Sciences, Macquarie University, Sydney, 2109, NSW, Australia.,Taronga Conservation Society Australia, Mosman, 2088, NSW, Australia
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34
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Geoghegan JL, Pirotta V, Harvey E, Smith A, Buchmann JP, Ostrowski M, Eden JS, Harcourt R, Holmes EC. Virological Sampling of Inaccessible Wildlife with Drones. Viruses 2018; 10:v10060300. [PMID: 29865228 PMCID: PMC6024715 DOI: 10.3390/v10060300] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2018] [Revised: 05/31/2018] [Accepted: 05/31/2018] [Indexed: 11/16/2022] Open
Abstract
There is growing interest in characterizing the viromes of diverse mammalian species, particularly in the context of disease emergence. However, little is known about virome diversity in aquatic mammals, in part due to difficulties in sampling. We characterized the virome of the exhaled breath (or blow) of the Eastern Australian humpback whale (Megaptera novaeangliae). To achieve an unbiased survey of virome diversity, a meta-transcriptomic analysis was performed on 19 pooled whale blow samples collected via a purpose-built Unmanned Aerial Vehicle (UAV, or drone) approximately 3 km off the coast of Sydney, Australia during the 2017 winter annual northward migration from Antarctica to northern Australia. To our knowledge, this is the first time that UAVs have been used to sample viruses. Despite the relatively small number of animals surveyed in this initial study, we identified six novel virus species from five viral families. This work demonstrates the potential of UAVs in studies of virus disease, diversity, and evolution.
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Affiliation(s)
- Jemma L Geoghegan
- Department of Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia.
| | - Vanessa Pirotta
- Department of Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia.
| | - Erin Harvey
- Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, The University of Sydney, Sydney, NSW 2006, Australia.
| | - Alastair Smith
- Heliguy Scientific Pty Ltd., Sydney, NSW 2204, Australia.
| | - Jan P Buchmann
- Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, The University of Sydney, Sydney, NSW 2006, Australia.
| | - Martin Ostrowski
- Department of Molecular Sciences, Macquarie University, Sydney, NSW 2109, Australia.
| | - John-Sebastian Eden
- Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, The University of Sydney, Sydney, NSW 2006, Australia.
- Westmead Institute for Medical Research, Centre for Virus Research, Westmead, NSW 2145, Australia.
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia.
| | - Edward C Holmes
- Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, The University of Sydney, Sydney, NSW 2006, Australia.
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35
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Hoenner X, Huveneers C, Steckenreuter A, Simpfendorfer C, Tattersall K, Jaine F, Atkins N, Babcock R, Brodie S, Burgess J, Campbell H, Heupel M, Pasquer B, Proctor R, Taylor MD, Udyawer V, Harcourt R. Australia's continental-scale acoustic tracking database and its automated quality control process. Sci Data 2018; 5:170206. [PMID: 29381146 PMCID: PMC5789868 DOI: 10.1038/sdata.2017.206] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2017] [Accepted: 12/07/2017] [Indexed: 11/09/2022] Open
Abstract
Our ability to predict species responses to environmental changes relies on accurate records of animal movement patterns. Continental-scale acoustic telemetry networks are increasingly being established worldwide, producing large volumes of information-rich geospatial data. During the last decade, the Integrated Marine Observing System's Animal Tracking Facility (IMOS ATF) established a permanent array of acoustic receivers around Australia. Simultaneously, IMOS developed a centralised national database to foster collaborative research across the user community and quantify individual behaviour across a broad range of taxa. Here we present the database and quality control procedures developed to collate 49.6 million valid detections from 1891 receiving stations. This dataset consists of detections for 3,777 tags deployed on 117 marine species, with distances travelled ranging from a few to thousands of kilometres. Connectivity between regions was only made possible by the joint contribution of IMOS infrastructure and researcher-funded receivers. This dataset constitutes a valuable resource facilitating meta-analysis of animal movement, distributions, and habitat use, and is important for relating species distribution shifts with environmental covariates.
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Affiliation(s)
- Xavier Hoenner
- Australian Ocean Data Network, Integrated Marine Observing System University of Tasmania, Private Bag 110, Hobart, Tasmania 7001, Australia
| | - Charlie Huveneers
- School of Biological Sciences, Flinders University, GPO Box 2100, Adelaide, South Australia 5001, Australia
| | | | - Colin Simpfendorfer
- Centre for Sustainable Tropical Fisheries and Aquaculture and College of Marine and Environmental Sciences, James Cook University, Townsville, Queensland 4811, Australia
| | - Katherine Tattersall
- Australian Ocean Data Network, Integrated Marine Observing System University of Tasmania, Private Bag 110, Hobart, Tasmania 7001, Australia
| | - Fabrice Jaine
- Sydney Institute of Marine Science, Mosman, New South Wales 2088, Australia.,Department of Biological Sciences, Macquarie University, New South Wales 2109, Australia
| | - Natalia Atkins
- Australian Ocean Data Network, Integrated Marine Observing System University of Tasmania, Private Bag 110, Hobart, Tasmania 7001, Australia
| | - Russ Babcock
- CSIRO Oceans and Atmosphere, GPO Box 2583, Brisbane 4001, Australia
| | - Stephanie Brodie
- Sydney Institute of Marine Science, Mosman, New South Wales 2088, Australia.,Ecology and Evolution Research Centre, and School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, New South Wales 2052, Australia
| | - Jonathan Burgess
- Australian Ocean Data Network, Integrated Marine Observing System University of Tasmania, Private Bag 110, Hobart, Tasmania 7001, Australia
| | - Hamish Campbell
- Research Institute for Environment and Livelihoods, School of Environment, Charles Darwin University, Northern Territory 0909, Australia
| | - Michelle Heupel
- Australian Institute of Marine Science, Townsville, Queensland 4810, Australia
| | - Benedicte Pasquer
- Australian Ocean Data Network, Integrated Marine Observing System University of Tasmania, Private Bag 110, Hobart, Tasmania 7001, Australia
| | - Roger Proctor
- Australian Ocean Data Network, Integrated Marine Observing System University of Tasmania, Private Bag 110, Hobart, Tasmania 7001, Australia
| | - Matthew D Taylor
- Ecology and Evolution Research Centre, and School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, New South Wales 2052, Australia.,Port Stephens Fisheries Institute, New South Wales Department of Primary Industries, Taylors Beach Rd, Taylors Beach, New South Wales 2316, Australia
| | - Vinay Udyawer
- Australian Institute of Marine Science, Townsville, Queensland 4810, Australia
| | - Robert Harcourt
- Sydney Institute of Marine Science, Mosman, New South Wales 2088, Australia.,Department of Biological Sciences, Macquarie University, New South Wales 2109, Australia
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36
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Huveneers C, Stehfest KM, Simpfendorfer CA, Semmens J, Hobday AJ, Pederson H, Stieglitz T, Vallee R, Webber D, Heupel MR, Harcourt R. Application of the Acoustic Propagation Model to a deep‐water cross‐shelf curtain. Methods Ecol Evol 2017. [DOI: 10.1111/2041-210x.12806] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
- Charlie Huveneers
- School of Biological Sciences Flinders University Bedford Park Adelaide SA 5042 Australia
| | - Kilian M. Stehfest
- Fisheries and Aquaculture Centre Institute for Marine and Antarctic Studies University of Tasmania Hobart TAS 7000 Australia
| | - Colin A. Simpfendorfer
- Centre for Sustainable Tropical Fisheries and Aquaculture & College of Marine and Environmental Sciences James Cook University Townsville QLD 4811 Australia
| | - Jayson Semmens
- Fisheries and Aquaculture Centre Institute for Marine and Antarctic Studies University of Tasmania Hobart TAS 7000 Australia
| | | | - Hugh Pederson
- Vemco a division of AMIRIX Systems Inc Bedford NS B4B 0L9 Canada
| | - Thomas Stieglitz
- College of Science, Technology & Engineering & Centre for Tropical Water and Aquatic Ecosystem Research James Cook University Townsville QLD 4811 Australia
| | - Richard Vallee
- Vemco a division of AMIRIX Systems Inc Bedford NS B4B 0L9 Canada
| | - Dale Webber
- Vemco a division of AMIRIX Systems Inc Bedford NS B4B 0L9 Canada
| | | | - Robert Harcourt
- Department of Biological Sciences Macquarie University Sydney NSW 2109 Australia
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37
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Carroll G, Cox M, Harcourt R, Pitcher BJ, Slip D, Jonsen I. Hierarchical influences of prey distribution on patterns of prey capture by a marine predator. Funct Ecol 2017. [DOI: 10.1111/1365-2435.12873] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Gemma Carroll
- Department of Biological Sciences Faculty of Science and Engineering Macquarie University North Ryde2109 NSW Australia
| | - Martin Cox
- Australian Antarctic Division 203 Channel Hwy Kingston TAS Australia
| | - Robert Harcourt
- Department of Biological Sciences Faculty of Science and Engineering Macquarie University North Ryde2109 NSW Australia
| | - Benjamin J. Pitcher
- Department of Biological Sciences Faculty of Science and Engineering Macquarie University North Ryde2109 NSW Australia
| | - David Slip
- Department of Biological Sciences Faculty of Science and Engineering Macquarie University North Ryde2109 NSW Australia
- Taronga Conservation Society Australia Bradley's Head Rd Mosman2088 NSW Australia
| | - Ian Jonsen
- Department of Biological Sciences Faculty of Science and Engineering Macquarie University North Ryde2109 NSW Australia
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38
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Momigliano P, Harcourt R, Robbins WD, Jaiteh V, Mahardika GN, Sembiring A, Stow A. Genetic structure and signatures of selection in grey reef sharks (Carcharhinus amblyrhynchos). Heredity (Edinb) 2017; 119:142-153. [PMID: 28422134 DOI: 10.1038/hdy.2017.21] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2016] [Revised: 02/17/2017] [Accepted: 03/02/2017] [Indexed: 01/01/2023] Open
Abstract
With overfishing reducing the abundance of marine predators in multiple marine ecosystems, knowledge of genetic structure and local adaptation may provide valuable information to assist sustainable management. Despite recent technological advances, most studies on sharks have used small sets of neutral markers to describe their genetic structure. We used 5517 nuclear single-nucleotide polymorphisms (SNPs) and a mitochondrial DNA (mtDNA) gene to characterize patterns of genetic structure and detect signatures of selection in grey reef sharks (Carcharhinus amblyrhynchos). Using samples from Australia, Indonesia and oceanic reefs in the Indian Ocean, we established that large oceanic distances represent barriers to gene flow, whereas genetic differentiation on continental shelves follows an isolation by distance model. In Australia and Indonesia differentiation at nuclear SNPs was weak, with coral reefs acting as stepping stones maintaining connectivity across large distances. Differentiation of mtDNA was stronger, and more pronounced in females, suggesting sex-biased dispersal. Four independent tests identified a set of loci putatively under selection, indicating that grey reef sharks in eastern Australia are likely under different selective pressures to those in western Australia and Indonesia. Genetic distances averaged across all loci were uncorrelated with genetic distances calculated from outlier loci, supporting the conclusion that different processes underpin genetic divergence in these two data sets. This pattern of heterogeneous genomic differentiation, suggestive of local adaptation, has implications for the conservation of grey reef sharks; furthermore, it highlights that marine species showing little genetic differentiation at neutral loci may exhibit patterns of cryptic genetic structure driven by local selection.
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Affiliation(s)
- P Momigliano
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales, Australia.,Sydney Institute of Marine Science, Mosman, New South Wales, Australia.,Ecological Genetics Research Unit, Department of Biosciences, University of Helsinki, Helsinki, Finland
| | - R Harcourt
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales, Australia
| | - W D Robbins
- College of Marine and Environmental Science, James Cook University, Townsville, Queensland, Australia.,Wildlife Marine, Perth, Western Australia, Australia
| | - V Jaiteh
- Centre for Fish and Fisheries Research, Murdoch University, Murdoch, Western Australia, Australia
| | - G N Mahardika
- The Indonesian Biodiversity Research Centre, Udayana University, Denpasar, Bali, Indonesia
| | - A Sembiring
- The Indonesian Biodiversity Research Centre, Udayana University, Denpasar, Bali, Indonesia
| | - A Stow
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales, Australia
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39
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Labrousse S, Sallée JB, Fraser AD, Massom RA, Reid P, Hobbs W, Guinet C, Harcourt R, McMahon C, Authier M, Bailleul F, Hindell MA, Charrassin JB. Variability in sea ice cover and climate elicit sex specific responses in an Antarctic predator. Sci Rep 2017; 7:43236. [PMID: 28233791 PMCID: PMC5324094 DOI: 10.1038/srep43236] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2016] [Accepted: 01/20/2017] [Indexed: 11/09/2022] Open
Abstract
Contrasting regional changes in Southern Ocean sea ice have occurred over the last 30 years with distinct regional effects on ecosystem structure and function. Quantifying how Antarctic predators respond to such changes provides the context for predicting how climate variability/change will affect these assemblages into the future. Over an 11-year time-series, we examine how inter-annual variability in sea ice concentration and advance affect the foraging behaviour of a top Antarctic predator, the southern elephant seal. Females foraged longer in pack ice in years with greatest sea ice concentration and earliest sea ice advance, while males foraged longer in polynyas in years of lowest sea ice concentration. There was a positive relationship between near-surface meridional wind anomalies and female foraging effort, but not for males. This study reveals the complexities of foraging responses to climate forcing by a poleward migratory predator through varying sea ice property and dynamic anomalies.
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Affiliation(s)
- Sara Labrousse
- Sorbonne Universités, UPMC Univ., Paris 06, UMR 7159 CNRS-IRD-MNHN, LOCEAN-IPSL, 75005 Paris, France.,Marine Predator Unit, Institute for Marine and Antarctic Studies, University of Tasmania, Private Bag 129, Hobart, Tasmania 7001, Australia
| | - Jean-Baptiste Sallée
- Sorbonne Universités, UPMC Univ., Paris 06, UMR 7159 CNRS-IRD-MNHN, LOCEAN-IPSL, 75005 Paris, France.,British Antarctic Survey, High Cross, Cambridge, CB3 0ET, UK
| | - Alexander D Fraser
- Institute of Low Temperature Science, Hokkaido University, N19 W8, Kita-ku, Sapporo 060-0819, Japan.,Antarctic Climate &Ecosystems Cooperative Research Centre, University of Tasmania, Private Bag 80, Hobart, Tasmania 7001, Australia
| | - Rob A Massom
- Antarctic Climate &Ecosystems Cooperative Research Centre, University of Tasmania, Private Bag 80, Hobart, Tasmania 7001, Australia.,Australian Antarctic Division, Channel Highway, Kingston, Tasmania 7050, Australia
| | - Phillip Reid
- Australian Bureau of Meteorology, Centre for Australian Weather and Climate Research, Hobart, Tasmania 7001, Australia
| | - William Hobbs
- Antarctic Climate &Ecosystems Cooperative Research Centre, University of Tasmania, Private Bag 80, Hobart, Tasmania 7001, Australia.,Centre of Excellence for Climate System Science, Australian Research Council, Sydney, New South Wales 2052, Australia
| | - Christophe Guinet
- Centre d'Etudes Biologiques de Chizé (CEBC), UMR 7372 Université de la Rochelle-CNRS, 79360 Villiers en Bois, France
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales 2109, Australia
| | - Clive McMahon
- Marine Predator Unit, Institute for Marine and Antarctic Studies, University of Tasmania, Private Bag 129, Hobart, Tasmania 7001, Australia.,Department of Biological Sciences, Macquarie University, Sydney, New South Wales 2109, Australia.,Sydney Institute of Marine Science, 19 Chowder Bay Road, Mosman, New South Wales 2088, Australia
| | - Matthieu Authier
- Observatoire PELAGIS, UMS 3462 CNRS-ULR, 17000 La Rochelle, France
| | - Frédéric Bailleul
- South Australian Research &Development Institute (SARDI), 2 Hamra Avenue, West Beach, South Australia 5024, Australia
| | - Mark A Hindell
- Marine Predator Unit, Institute for Marine and Antarctic Studies, University of Tasmania, Private Bag 129, Hobart, Tasmania 7001, Australia.,Antarctic Climate &Ecosystems Cooperative Research Centre, University of Tasmania, Private Bag 80, Hobart, Tasmania 7001, Australia
| | - Jean-Benoit Charrassin
- Sorbonne Universités, UPMC Univ., Paris 06, UMR 7159 CNRS-IRD-MNHN, LOCEAN-IPSL, 75005 Paris, France
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40
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Williams GD, Herraiz-Borreguero L, Roquet F, Tamura T, Ohshima KI, Fukamachi Y, Fraser AD, Gao L, Chen H, McMahon CR, Harcourt R, Hindell M. The suppression of Antarctic bottom water formation by melting ice shelves in Prydz Bay. Nat Commun 2016; 7:12577. [PMID: 27552365 PMCID: PMC4996980 DOI: 10.1038/ncomms12577] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2015] [Accepted: 07/14/2016] [Indexed: 11/18/2022] Open
Abstract
A fourth production region for the globally important Antarctic bottom water has been attributed to dense shelf water formation in the Cape Darnley Polynya, adjoining Prydz Bay in East Antarctica. Here we show new observations from CTD-instrumented elephant seals in 2011–2013 that provide the first complete assessment of dense shelf water formation in Prydz Bay. After a complex evolution involving opposing contributions from three polynyas (positive) and two ice shelves (negative), dense shelf water (salinity 34.65–34.7) is exported through Prydz Channel. This provides a distinct, relatively fresh contribution to Cape Darnley bottom water. Elsewhere, dense water formation is hindered by the freshwater input from the Amery and West Ice Shelves into the Prydz Bay Gyre. This study highlights the susceptibility of Antarctic bottom water to increased freshwater input from the enhanced melting of ice shelves, and ultimately the potential collapse of Antarctic bottom water formation in a warming climate. Antarctic bottom water (AABW) production is critical to the global ocean overturning circulation. Here, the authors show new observations of AABW formation from seal CTD data in Prydz Bay, East Antarctica that highlights its susceptibility to increased freshwater input from the melting of ice shelves.
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Affiliation(s)
- G D Williams
- Institute for Marine and Antarctic Studies, University of Tasmania, Private Bag 129, Hobart, Tasmania 7001, Australia.,Antarctic Climate &Ecosystems Cooperative Research Centre, University of Tasmania, Private Bag 80, Hobart 7001, Australia
| | - L Herraiz-Borreguero
- Centre for Ice and Climate, Niels Bohr Institute, University of Copenhagen, Julianne Marie vej 30, Copenhagen 2100, Denmark
| | - F Roquet
- Department of Meteorology, Stockholm University, Stockholm 106 91, Sweden
| | - T Tamura
- Antarctic Climate &Ecosystems Cooperative Research Centre, University of Tasmania, Private Bag 80, Hobart 7001, Australia.,National Institute of Polar Research, Tokyo 190-8518, Japan.,Sokendai (The Graduate University for Advanced Studies), Tokyo 190-8518, Japan
| | - K I Ohshima
- Institute of Low Temperature Science, Hokkaido University Kita-19, Nishi-8, Sapporo 060-0819, Japan
| | - Y Fukamachi
- Institute of Low Temperature Science, Hokkaido University Kita-19, Nishi-8, Sapporo 060-0819, Japan
| | - A D Fraser
- Antarctic Climate &Ecosystems Cooperative Research Centre, University of Tasmania, Private Bag 80, Hobart 7001, Australia.,Institute of Low Temperature Science, Hokkaido University Kita-19, Nishi-8, Sapporo 060-0819, Japan
| | - L Gao
- The First Institute of Oceanography, State Oceanic Administration, No. 6 Xianxialing Road, Qingdao 266061, China
| | - H Chen
- The First Institute of Oceanography, State Oceanic Administration, No. 6 Xianxialing Road, Qingdao 266061, China
| | - C R McMahon
- Sydney Institute of Marine Science, 19 Chowder Bay Road, Mosman, New South Wales 2088, Australia
| | - R Harcourt
- Sydney Institute of Marine Science, 19 Chowder Bay Road, Mosman, New South Wales 2088, Australia.,Department of Biological Sciences, Macquarie University, New South Wales 2109, Australia
| | - M Hindell
- Institute for Marine and Antarctic Studies, University of Tasmania, Private Bag 129, Hobart, Tasmania 7001, Australia.,Antarctic Climate &Ecosystems Cooperative Research Centre, University of Tasmania, Private Bag 80, Hobart 7001, Australia
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41
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Pirotta V, Slip D, Jonsen ID, Peddemors VM, Cato DH, Ross G, Harcourt R. Migrating humpback whales show no detectable response to whale alarms off Sydney, Australia. ENDANGER SPECIES RES 2016. [DOI: 10.3354/esr00712] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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42
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Carroll EL, Baker CS, Watson M, Alderman R, Bannister J, Gaggiotti OE, Gröcke DR, Patenaude N, Harcourt R. Cultural traditions across a migratory network shape the genetic structure of southern right whales around Australia and New Zealand. Sci Rep 2015; 5:16182. [PMID: 26548756 PMCID: PMC4637828 DOI: 10.1038/srep16182] [Citation(s) in RCA: 64] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2015] [Accepted: 10/09/2015] [Indexed: 11/08/2022] Open
Abstract
Fidelity to migratory destinations is an important driver of connectivity in marine and avian species. Here we assess the role of maternally directed learning of migratory habitats, or migratory culture, on the population structure of the endangered Australian and New Zealand southern right whale. Using DNA profiles, comprising mitochondrial DNA (mtDNA) haplotypes (500 bp), microsatellite genotypes (17 loci) and sex from 128 individually-identified whales, we find significant differentiation among winter calving grounds based on both mtDNA haplotype (FST = 0.048, ΦST = 0.109, p < 0.01) and microsatellite allele frequencies (FST = 0.008, p < 0.01), consistent with long-term fidelity to calving areas. However, most genetic comparisons of calving grounds and migratory corridors were not significant, supporting the idea that whales from different calving grounds mix in migratory corridors. Furthermore, we find a significant relationship between δ(13)C stable isotope profiles of 66 Australian southern right whales, a proxy for feeding ground location, and both mtDNA haplotypes and kinship inferred from microsatellite-based estimators of relatedness. This indicates migratory culture may influence genetic structure on feeding grounds. This fidelity to migratory destinations is likely to influence population recovery, as long-term estimates of historical abundance derived from estimates of genetic diversity indicate the South Pacific calving grounds remain at <10% of pre-whaling abundance.
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Affiliation(s)
- E. L. Carroll
- Scottish Oceans Institute, University of St Andrews, St Andrews, Fife, KY16 8LB, Scotland
- Department of Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia
| | - C. S. Baker
- School of Biological Sciences, University of Auckland, Auckland 1010, New Zealand
- Marine Mammal Institute and Department of Fisheries and Wildlife, Hatfield Marine Science Center, Oregon State University, Newport, OR 97365, USA
| | - M. Watson
- Department of the Environment, Land, Water and Planning, Barwon South West Region, Warrnambool, VIC 3280, Australia
| | - R. Alderman
- Department of Primary Industries, Parks, Water and Environment, Hobart, TAS 7000, Australia
| | - J. Bannister
- The Western Australian Museum, Locked Bag 49, Welshpool DC, WA 6986, Australia
| | - O. E. Gaggiotti
- Scottish Oceans Institute, University of St Andrews, St Andrews, Fife, KY16 8LB, Scotland
| | - D. R. Gröcke
- Department of Earth Sciences, Durham University, Durham, DH1 3LE, United Kingdom
| | - N. Patenaude
- Department of Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia
- Collégial International Sainte-Anne, Montréal, Québec, QC H8S 2M8, Canada
| | - R. Harcourt
- Department of Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia
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Momigliano P, Harcourt R, Robbins WD, Stow A. Connectivity in grey reef sharks (Carcharhinus amblyrhynchos) determined using empirical and simulated genetic data. Sci Rep 2015; 5:13229. [PMID: 26314287 PMCID: PMC4551972 DOI: 10.1038/srep13229] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2015] [Accepted: 07/21/2015] [Indexed: 11/13/2022] Open
Abstract
Grey reef sharks (Carcharhinus amblyrhynchos) can be one of the numerically dominant high order predators on pristine coral reefs, yet their numbers have declined even in the highly regulated Australian Great Barrier Reef (GBR) Marine Park. Knowledge of both large scale and fine scale genetic connectivity of grey reef sharks is essential for their effective management, but no genetic data are yet available. We investigated grey reef shark genetic structure in the GBR across a 1200 km latitudinal gradient, comparing empirical data with models simulating different levels of migration. The empirical data did not reveal any genetic structuring along the entire latitudinal gradient sampled, suggesting regular widespread dispersal and gene flow of the species throughout most of the GBR. Our simulated datasets indicate that even with substantial migrations (up to 25% of individuals migrating between neighboring reefs) both large scale genetic structure and genotypic spatial autocorrelation at the reef scale were maintained. We suggest that present migration rates therefore exceed this level. These findings have important implications regarding the effectiveness of networks of spatially discontinuous Marine Protected Areas to protect reef sharks.
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Affiliation(s)
- Paolo Momigliano
- Department of Biological Sciences, Macquarie University, Sydney, 2109 New South Wales, Australia
- Sydney Institute of Marine Science, 19 Chowder Bay Road, Mosman, 2088 New South Wales, Australia
| | - Robert Harcourt
- Department of Biological Sciences, Macquarie University, Sydney, 2109 New South Wales, Australia
| | - William D. Robbins
- College of Marine and Environmental Science, James Cook University, Townsville, 4810 Queensland, Australia
- Wildlife Marine, Perth, 6020 Western Australia, Australia
| | - Adam Stow
- Department of Biological Sciences, Macquarie University, Sydney, 2109 New South Wales, Australia
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Desprez M, Harcourt R, Hindell MA, Cubaynes S, Gimenez O, McMahon CR. Age-specific cost of first reproduction in female southern elephant seals. Biol Lett 2014; 10:20140264. [PMID: 24872464 DOI: 10.1098/rsbl.2014.0264] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
When to commence breeding is a crucial life-history decision that may be the most important determinant of an individual's lifetime reproductive output and can have major consequences on population dynamics. The age at which individuals first reproduce is an important factor influencing the intensity of potential costs (e.g. reduced survival) involved in the first breeding event. However, quantifying age-related variation in the cost of first reproduction in wild animals remains challenging because of the difficulty in reliably recording the first breeding event. Here, using a multi-event capture-recapture model that accounts for both imperfect detection and uncertainty in the breeding status on an 18-year dataset involving 6637 individuals, we estimated age and state-specific survival of female elephant seals (Mirounga leonina) in the declining Macquarie Island population. We detected a clear cost of first reproduction on survival. This cost was higher for both younger first-time breeders and older first-time breeders compared with females recruiting at age four, the overall mean age at first reproduction. Neither earlier primiparity nor delaying primiparity appear to confer any evolutionary advantage, rather the optimal strategy seems to be to start breeding at a single age, 4 years.
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Affiliation(s)
- Marine Desprez
- Marine Predator Research Group, Department of Biological Sciences, Macquarie University, North Ryde, New South Wales 2109, Australia
| | - Robert Harcourt
- Marine Predator Research Group, Department of Biological Sciences, Macquarie University, North Ryde, New South Wales 2109, Australia
| | - Mark A Hindell
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania 7001, Australia
| | - Sarah Cubaynes
- Department of Zoology, University of Oxford, The Tinbergen Building, South Parks Road, Oxford OX1 3PS, UK
| | - Olivier Gimenez
- Centre d'Ecologie Fonctionnelle et Evolutive, Campus CNRS, UMR 5175, 1919 Route de Mende, 34293 Montpellier Cedex 5, France
| | - Clive R McMahon
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania 7001, Australia Sydney Institute of Marine Science, 19 Chowder Bay Road, Mosman, New South Wales 2088, Australia
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Abstract
Humpback whale (Megaptera novaeangliae) watchers off Sydney, Australia were surveyed using stated preference techniques to investigate whether they were prepared to prioritize minimizing impact on whales over other factors of their whale-watching experience. Differences between
shore- and boat-based whale watchers (343 and 1,133 participants, respectively) to hypothetical whale-watching situations were investigated. Both groups had a strong preference for minimizing impact on the animals. Boat-based whale watchers placed a slightly higher priority on receiving environmental
education. Both groups expressed a preference for approaching closer to the whales than currently permitted (i.e., to 50 m), but the high levels of satisfaction of boat-based whale watchers suggest closer approach distances are not necessary to ensure a positive whale-watching experience.
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46
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Harcourt R, Pirotta V, Heller G, Peddemors V, Slip D. A whale alarm fails to deter migrating humpback whales: an empirical test. ENDANGER SPECIES RES 2014. [DOI: 10.3354/esr00614] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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47
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Carroll G, Hedley S, Bannister J, Ensor P, Harcourt R. No evidence for recovery in the population of sperm whale bulls off Western Australia, 30 years post-whaling. ENDANGER SPECIES RES 2014. [DOI: 10.3354/esr00584] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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Lynch TP, Harcourt R, Edgar G, Barrett N. Conservation of the critically endangered eastern Australian population of the grey nurse shark (Carcharias taurus) through cross-jurisdictional management of a network of marine-protected areas. Environ Manage 2013; 52:1341-1354. [PMID: 24213854 DOI: 10.1007/s00267-013-0174-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2012] [Accepted: 09/18/2013] [Indexed: 06/02/2023]
Abstract
Between 2001 and 2009, 26 marine-protected areas (MPA) were established on the east Australian seaboard, at least in part, to manage human interactions with a critically endangered population of grey nurse shark, Carcharias taurus. This network is spread across six MPA systems and includes all 19 sites outlined in the National Recovery Plan for C. taurus, though five sites remain open to some forms of fishing. The reserve network has complex cross-jurisdictional management, as the sharks occur in waters controlled by the Australian states of New South Wales (NSW) and Queensland, as well as by the Commonwealth (Federal) government. Jurisdiction is further complicated by fisheries and conservation departments both engaging in management activities within each state. This has resulted in protected area types that include IUCN category II equivalent zones in NSW, Queensland, and Commonwealth marine parks that either overlay or complement another large scaled network of protected sites called critical habitats. Across the network, seven and eight rule permutations for diving and fishing, respectively, are applied to this population of sharks. Besides sites identified by the recovery plan, additional sites have been protected as part of the general development of MPA networks. A case study at one of these sites, which historically was known to be occupied by C. taurus but had been abandoned, appears to shows re-establishment of an aggregation of juvenile and sub-adult sharks. Concurrent with the re-establishment of the aggregation, a local dive operator increased seasonal dive visitation rates at the site fourfold. As a precautionary measure, protection of abandoned sites, which includes nursery and gestating female habitats are options that may assist recovery of the east coast population of C. taurus.
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Affiliation(s)
- Tim P Lynch
- CSIRO, GPO Box 1538, Hobart, TAS, 7001, Australia,
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49
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Desprez M, McMahon CR, Hindell MA, Harcourt R, Gimenez O. Known unknowns in an imperfect world: incorporating uncertainty in recruitment estimates using multi-event capture-recapture models. Ecol Evol 2013; 3:4658-68. [PMID: 24363895 PMCID: PMC3867902 DOI: 10.1002/ece3.846] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2013] [Revised: 09/17/2013] [Accepted: 09/19/2013] [Indexed: 11/11/2022] Open
Abstract
Studying the demography of wild animals remains challenging as several of the critical parts of their life history may be difficult to observe in the field. In particular, determining with certainty when an individual breeds for the first time is not always obvious. This can be problematic because uncertainty about the transition from a prebreeder to a breeder state - recruitment - leads to uncertainty in vital rate estimates and in turn in population projection models. To avoid this issue, the common practice is to discard imperfect data from the analyses. However, this practice can generate a bias in vital rate estimates if uncertainty is related to a specific component of the population and reduces the sample size of the dataset and consequently the statistical power to detect effects of biological interest. Here, we compared the demographic parameters assessed from a standard multistate capture-recapture approach to the estimates obtained from the newly developed multi-event framework that specifically accounts for uncertainty in state assessment. Using a comprehensive longitudinal dataset on southern elephant seals, we demonstrated that the multi-event model enabled us to use all the data collected (6639 capture-recapture histories vs. 4179 with the multistate model) by accounting for uncertainty in breeding states, thereby increasing the precision and accuracy of the demographic parameter estimates. The multi-event model allowed us to incorporate imperfect data into demographic analyses. The gain in precision obtained has important implications in the conservation and management of species because limiting uncertainty around vital rates will permit predicting population viability with greater accuracy.
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Affiliation(s)
- Marine Desprez
- Marine Predator Research Group, Department of Biological Sciences, Macquarie UniversityNorth Ryde, 2109, New South Wales, Australia
| | - Clive R McMahon
- Institute for Marine and Antarctic Studies, University of TasmaniaHobart, 7001, Tasmania, Australia
| | - Mark A Hindell
- Institute for Marine and Antarctic Studies, University of TasmaniaHobart, 7001, Tasmania, Australia
| | - Robert Harcourt
- Marine Predator Research Group, Department of Biological Sciences, Macquarie UniversityNorth Ryde, 2109, New South Wales, Australia
| | - Olivier Gimenez
- Centre d'Ecologie Fonctionnelle et Evolutive, campus CNRS, UMR 51751919 Route de Mende, Montpellier Cedex 5, 34293, France
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Steckenreuter A, Möller L, Harcourt R. How does Australia's largest dolphin-watching industry affect the behaviour of a small and resident population of Indo-Pacific bottlenose dolphins? J Environ Manage 2012; 97:14-21. [PMID: 22325578 DOI: 10.1016/j.jenvman.2011.11.002] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2010] [Revised: 10/19/2011] [Accepted: 11/03/2011] [Indexed: 05/31/2023]
Abstract
The small, genetically distinct population of Indo-Pacific bottlenose dolphins (Tursiops aduncus) in Port Stephens, New South Wales (NSW), is the target of the largest dolphin-watching industry in Australia and is located within the Port Stephens - Great Lakes Marine Park that was created in 2005. The effects of this industry have been identified as of significant management importance by the Marine Parks Authority NSW. Accordingly, the impact of commercial dolphin-watching boats was investigated from boat-based surveys from August 2008 to August 2009. Presence of dolphin-watching boats altered both the dolphins' behavioural states and activity budgets. Dolphins spent 66.5% less time feeding and 44.2% less time socialising, spent four times more milling, and were never observed to rest in the presence of dolphin-watching boats. Moreover, dolphin groups were more cohesive during dolphin-watching boat encounters and dolphins tended to avoid tour boats. These effects were exacerbated as the number of boats increased and the distance from boats decreased. The rate of approach was high with boats approaching each dolphin group three times per day in winter and six times in summer. Moreover, groups of dolphins with newborns were approached closer than state regulated minimum approach distances in nine out of ten encounters. Globally, dolphin-watching industries frequent small resident groups of coastal dolphins and effects are likely to be similar. We suggest that existing controls are inadequate and that these together with additional regulations be enforced by a regular presence of authorities. We suggest no more than one dolphin-watching boat within 50 m of a group of dolphins, or 100 m if calves are present. Operating times of dolphin-watching boats should be restricted in numbers after 1 pm, i.e., during preferred foraging times for dolphins. Additionally, exclusion zones should be considered to reduce pressure on dolphins undertaking critical activities such as feeding and resting. We recommend monitoring the effectiveness of new regulations that are incorporated in the reviewed marine park management plan in 2012 for a period of three years.
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Affiliation(s)
- Andre Steckenreuter
- Marine Mammal Research Group, Graduate School of the Environment, Macquarie University, Balaclava Rd, Sydney, New South Wales 2109, Australia.
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