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Ehlmann BL, Edgett KS, Sutter B, Achilles CN, Litvak ML, Lapotre MGA, Sullivan R, Fraeman AA, Arvidson RE, Blake DF, Bridges NT, Conrad PG, Cousin A, Downs RT, Gabriel TSJ, Gellert R, Hamilton VE, Hardgrove C, Johnson JR, Kuhn S, Mahaffy PR, Maurice S, McHenry M, Meslin PY, Ming DW, Minitti ME, Morookian JM, Morris RV, O'Connell-Cooper CD, Pinet PC, Rowland SK, Schröder S, Siebach KL, Stein NT, Thompson LM, Vaniman DT, Vasavada AR, Wellington DF, Wiens RC, Yen AS. Chemistry, mineralogy, and grain properties at Namib and High dunes, Bagnold dune field, Gale crater, Mars: A synthesis of Curiosity rover observations. JOURNAL OF GEOPHYSICAL RESEARCH. PLANETS 2017; 122:2510-2543. [PMID: 29497589 DOI: 10.1002/2016je005225] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2017] [Revised: 05/18/2017] [Accepted: 05/19/2017] [Indexed: 05/25/2023]
Abstract
The Mars Science Laboratory Curiosity rover performed coordinated measurements to examine the textures and compositions of aeolian sands in the active Bagnold dune field. The Bagnold sands are rounded to subrounded, very fine to medium sized (~45-500 μm) with ≥6 distinct grain colors. In contrast to sands examined by Curiosity in a dust-covered, inactive bedform called Rocknest and soils at other landing sites, Bagnold sands are darker, less red, better sorted, have fewer silt-sized or smaller grains, and show no evidence for cohesion. Nevertheless, Bagnold mineralogy and Rocknest mineralogy are similar with plagioclase, olivine, and pyroxenes in similar proportions comprising >90% of crystalline phases, along with a substantial amorphous component (35% ± 15%). Yet Bagnold and Rocknest bulk chemistry differ. Bagnold sands are Si enriched relative to other soils at Gale crater, and H2O, S, and Cl are lower relative to all previously measured Martian soils and most Gale crater rocks. Mg, Ni, Fe, and Mn are enriched in the coarse-sieved fraction of Bagnold sands, corroborated by visible/near-infrared spectra that suggest enrichment of olivine. Collectively, patterns in major element chemistry and volatile release data indicate two distinctive volatile reservoirs in Martian soils: (1) amorphous components in the sand-sized fraction (represented by Bagnold) that are Si-enriched, hydroxylated alteration products and/or H2O- or OH-bearing impact or volcanic glasses and (2) amorphous components in the fine fraction (<40 μm; represented by Rocknest and other bright soils) that are Fe, S, and Cl enriched with low Si and adsorbed and structural H2O.
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52
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Ścibisz G, Dec R, Dzwolak W. Mellitate: A multivalent anion with extreme charge density causes rapid aggregation and misfolding of wild type lysozyme at neutral pH. PLoS One 2017; 12:e0187328. [PMID: 29084264 PMCID: PMC5662172 DOI: 10.1371/journal.pone.0187328] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2017] [Accepted: 10/17/2017] [Indexed: 02/05/2023] Open
Abstract
Due to its symmetric structure and abundance of carboxyl groups, mellitic acid (MA–benzenehexacarboxylic acid) has an uncommon capacity to form highly ordered molecular networks. Dissolved in water, MA dissociates to yield various mellitate anions with pronounced tendencies to form complexes with cations including protonated amines. Deprotonation of MA at physiological pH produces anions with high charge densities (MA5- and MA6-) whose influence on co-dissolved proteins has not been thoroughly studied. As electrostatic attraction between highly symmetric MA6- anions and positively charged low-symmetry globular proteins could lead to interesting self-assembly patterns we have chosen hen egg white lysozyme (HEWL), a basic stably folded globular protein as a cationic partner for mellitate anions to form such hypothetical nanostructures. Indeed, mixing of neutral HEWL and MA solutions does result in precipitation of electrostatic complexes with the stoichiometry dependent on pH. We have studied the self-assembly of HEWL-MA structures using vibrational spectroscopy (infrared absorption and Raman scattering), circular dichroism (CD), atomic force microscopy (AFM). Possible HEWL-MA6- molecular docking scenarios were analyzed using computational tools. Our results indicate that even at equimolar ratios (in respect to HEWL), MA5- and MA6- anions are capable of inducing misfolding and aggregation of the protein upon mild heating which results in non-native intermolecular beta-sheet appearing in the amide I’ region of the corresponding infrared spectra. The association process leads to aggregates with compacted morphologies entrapping mellitate anions. The capacity of extremely diluted mellitate anions (i.e. at sub-millimolar concentration range) to trigger aggregation of proteins is discussed in the context of mechanisms of misfolding.
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Affiliation(s)
- Grzegorz Ścibisz
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw, Warsaw, Poland
| | - Robert Dec
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw, Warsaw, Poland
| | - Wojciech Dzwolak
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw, Warsaw, Poland
- * E-mail:
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53
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Blanco Y, Gallardo-Carreño I, Ruiz-Bermejo M, Puente-Sánchez F, Cavalcante-Silva E, Quesada A, Prieto-Ballesteros O, Parro V. Critical Assessment of Analytical Techniques in the Search for Biomarkers on Mars: A Mummified Microbial Mat from Antarctica as a Best-Case Scenario. ASTROBIOLOGY 2017; 17:984-996. [PMID: 29016195 PMCID: PMC5655591 DOI: 10.1089/ast.2016.1467] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2016] [Accepted: 03/20/2017] [Indexed: 05/17/2023]
Abstract
The search for biomarkers of present or past life is one of the major challenges for in situ planetary exploration. Multiple constraints limit the performance and sensitivity of remote in situ instrumentation. In addition, the structure, chemical, and mineralogical composition of the sample may complicate the analysis and interpretation of the results. The aim of this work is to highlight the main constraints, performance, and complementarity of several techniques that have already been implemented or are planned to be implemented on Mars for detection of organic and molecular biomarkers on a best-case sample scenario. We analyzed a 1000-year-old desiccated and mummified microbial mat from Antarctica by Raman and IR (infrared) spectroscopies (near- and mid-IR), thermogravimetry (TG), differential thermal analysis, mass spectrometry (MS), and immunological detection with a life detector chip. In spite of the high organic content (ca. 20% wt/wt) of the sample, the Raman spectra only showed the characteristic spectral peaks of the remaining beta-carotene biomarker and faint peaks of phyllosilicates over a strong fluorescence background. IR spectra complemented the mineralogical information from Raman spectra and showed the main molecular vibrations of the humic acid functional groups. The TG-MS system showed the release of several volatile compounds attributed to biopolymers. An antibody microarray for detecting cyanobacteria (CYANOCHIP) detected biomarkers from Chroococcales, Nostocales, and Oscillatoriales orders. The results highlight limitations of each technique and suggest the necessity of complementary approaches in the search for biomarkers because some analytical techniques might be impaired by sample composition, presentation, or processing. Key Words: Planetary exploration-Life detection-Microbial mat-Life detector chip-Thermogravimetry-Raman spectroscopy-NIR-DRIFTS. Astrobiology 17, 984-996.
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Affiliation(s)
- Yolanda Blanco
- Department of Molecular Evolution, Centro de Astrobiología (INTA-CSIC), Madrid, Spain
| | | | - Marta Ruiz-Bermejo
- Department of Molecular Evolution, Centro de Astrobiología (INTA-CSIC), Madrid, Spain
| | | | | | - Antonio Quesada
- Department of Molecular Evolution, Centro de Astrobiología (INTA-CSIC), Madrid, Spain
- Department of Biology, Universidad Autónoma de Madrid, Madrid, Spain
| | | | - Víctor Parro
- Department of Molecular Evolution, Centro de Astrobiología (INTA-CSIC), Madrid, Spain
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Nardone A, Ferreccio C, Acevedo J, Enanoria W, Blair A, Smith AH, Balmes J, Steinmaus C. The impact of BMI on non-malignant respiratory symptoms and lung function in arsenic exposed adults of Northern Chile. ENVIRONMENTAL RESEARCH 2017; 158:710-719. [PMID: 28738299 PMCID: PMC5603214 DOI: 10.1016/j.envres.2017.06.024] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2017] [Revised: 05/10/2017] [Accepted: 06/15/2017] [Indexed: 05/15/2023]
Abstract
BACKGROUND Elevated body mass index (BMI) and arsenic are both associated with cancer and with non-malignant lung disease. Using a unique exposure situation in Northern Chile with data on lifetime arsenic exposure, we previously identified the first evidence of an interaction between arsenic and BMI for the development of lung cancer. OBJECTIVES We examined whether there was an interaction between arsenic and BMI for the development of non-malignant lung disease. METHODS Data on lifetime arsenic exposure, respiratory symptoms, spirometry, BMI, and smoking were collected from 751 participants from cities in Northern Chile with varying levels of arsenic water concentrations. Spirometry values and respiratory symptoms were compared across subjects in different categories of arsenic exposure and BMI. RESULTS Adults with both a BMI above the 90th percentile (>33.9kg/m2) and arsenic water concentrations ≥11µg/L exhibited high odds ratios (ORs) for cough (OR = 10.7, 95% confidence interval (CI): 3.03, 50.1), shortness of breath (OR = 14.2, 95% CI: 4.79, 52.4), wheeze (OR = 14.4, 95% CI: 4.80, 53.7), and the combined presence of any respiratory symptom (OR = 9.82, 95% CI: 4.22, 24.5). In subjects with lower BMIs, respiratory symptom ORs for arsenic water concentrations ≥11µg/L were markedly lower. In never-smokers, reductions in forced vital capacity associated with arsenic increased as BMI increased. Analysis of the FEV1/FVC ratio in never-smokers significantly increased as BMI and arsenic concentrations increased. Similar trends were not observed for FEV1 alone or in ever-smokers. CONCLUSIONS This study provides preliminary evidence that BMI may increase the risk for arsenic-related non-malignant respiratory disease.
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Affiliation(s)
- Anthony Nardone
- Global Health Sciences Program, University of California San Francisco, San Francisco, CA, USA
| | - Catterina Ferreccio
- School of Medicine, Pontificia Universidad Católica de Chile, Santiago, Chile; Advanced Center for Chronic Diseases (ACCDiS), FONDAP, Santiago, Chile
| | - Johanna Acevedo
- School of Medicine, Pontificia Universidad Católica de Chile, Santiago, Chile; Advanced Center for Chronic Diseases (ACCDiS), FONDAP, Santiago, Chile
| | - Wayne Enanoria
- Department of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA, USA
| | - Alden Blair
- Global Health Sciences Program, University of California San Francisco, San Francisco, CA, USA
| | - Allan H Smith
- Arsenic Health Effects Research Program, University of California Berkeley, School of Public Health, Berkeley, CA, USA
| | - John Balmes
- Department of Medicine, University of California San Francisco, San Francisco, CA, USA; Division of Environmental Health Sciences, University of California Berkeley, School of Public Health, Berkeley, CA, USA
| | - Craig Steinmaus
- Arsenic Health Effects Research Program, University of California Berkeley, School of Public Health, Berkeley, CA, USA.
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55
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Goesmann F, Brinckerhoff WB, Raulin F, Goetz W, Danell RM, Getty SA, Siljeström S, Mißbach H, Steininger H, Arevalo RD, Buch A, Freissinet C, Grubisic A, Meierhenrich UJ, Pinnick VT, Stalport F, Szopa C, Vago JL, Lindner R, Schulte MD, Brucato JR, Glavin DP, Grand N, Li X, van Amerom FHW. The Mars Organic Molecule Analyzer (MOMA) Instrument: Characterization of Organic Material in Martian Sediments. ASTROBIOLOGY 2017; 17:655-685. [PMID: 31067288 PMCID: PMC5685156 DOI: 10.1089/ast.2016.1551] [Citation(s) in RCA: 85] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2016] [Accepted: 04/10/2017] [Indexed: 05/09/2023]
Abstract
The Mars Organic Molecule Analyzer (MOMA) instrument onboard the ESA/Roscosmos ExoMars rover (to launch in July, 2020) will analyze volatile and refractory organic compounds in martian surface and subsurface sediments. In this study, we describe the design, current status of development, and analytical capabilities of the instrument. Data acquired on preliminary MOMA flight-like hardware and experimental setups are also presented, illustrating their contribution to the overall science return of the mission. Key Words: Mars-Mass spectrometry-Life detection-Planetary instrumentation. Astrobiology 17, 655-685.
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Affiliation(s)
- Fred Goesmann
- Max-Planck-Institut für Sonnensystemforschung, Göttingen, Germany
| | | | - François Raulin
- LISA, U. Paris-Est, Créteil, U. Paris Diderot, Paris, CNRS, France
| | - Walter Goetz
- Max-Planck-Institut für Sonnensystemforschung, Göttingen, Germany
| | | | | | - Sandra Siljeström
- RISE Research Institutes of Sweden, Bioscience and Materials/Chemistry and Materials, Stockholm, Sweden
| | - Helge Mißbach
- Max-Planck-Institut für Sonnensystemforschung, Göttingen, Germany
| | | | | | - Arnaud Buch
- LPGM, CentraleParis, Chatenay-Malabry, France
| | | | - Andrej Grubisic
- NASA GSFC, Greenbelt, Maryland, USA
- University of Maryland, College Park, Maryland, USA
| | | | | | - Fabien Stalport
- LISA, U. Paris-Est, Créteil, U. Paris Diderot, Paris, CNRS, France
| | - Cyril Szopa
- LATMOS/IPSL, Guyancourt, France
- Institut Universitaire de France, Paris, France
| | | | | | | | | | | | - Noel Grand
- LISA, U. Paris-Est, Créteil, U. Paris Diderot, Paris, CNRS, France
| | - Xiang Li
- NASA GSFC, Greenbelt, Maryland, USA
- University of Maryland, Baltimore County, Baltimore, Maryland, USA
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56
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Azua-Bustos A, González-Silva C, Corsini G. The Hyperarid Core of the Atacama Desert, an Extremely Dry and Carbon Deprived Habitat of Potential Interest for the Field of Carbon Science. Front Microbiol 2017. [PMID: 28642741 PMCID: PMC5463503 DOI: 10.3389/fmicb.2017.00993] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
The Atacama Desert in Chile is the driest and oldest desert on Earth, also considered one of the best Mars analog models. Here, several heterotrophic microbial communities have been discovered in its driest regions, with the ones present in the soil subsurface being one of the most interesting due to its existence in a habitat with almost no water available and almost undetectable organic carbon sources. Our recent discovery of the driest site of the Atacama known to date (and the heterotrophic microbial species that are able to survive in this site) reaffirms the opportunity to better characterize the physiological and molecular mechanisms that these species use to detect, mobilize, incorporate and use carbon under these extremely harsh conditions. Here we summarize what has been reported up to date on the organic carbon concentrations in different sites of the hyperarid core of the Atacama Desert, proposing that due to the meager amounts of carbon and extremely dry conditions, the microbial communities of the hyperarid core of the Atacama Desert may be of interest for the field of carbon science.
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Affiliation(s)
- Armando Azua-Bustos
- Centro de Astrobiología (Consejo Superior de Investigaciones Científicas-Instituto Nacional de Técnica Aeroespacial)Madrid, Spain.,Instituto de Ciencias Biomédicas, Facultad de Ciencias de la Salud, Universidad Autónoma de ChileSantiago, Chile
| | | | - Gino Corsini
- Instituto de Ciencias Biomédicas, Facultad de Ciencias de la Salud, Universidad Autónoma de ChileSantiago, Chile
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57
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Lasne J, Noblet A, Szopa C, Navarro-González R, Cabane M, Poch O, Stalport F, François P, Atreya SK, Coll P. Oxidants at the Surface of Mars: A Review in Light of Recent Exploration Results. ASTROBIOLOGY 2016; 16:977-996. [PMID: 27925795 DOI: 10.1089/ast.2016.1502] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
In 1976, the Viking landers carried out the most comprehensive search for organics and microbial life in the martian regolith. Their results indicate that Mars' surface is lifeless and, surprisingly, depleted in organics at part-per-billion levels. Several biology experiments on the Viking landers gave controversial results that have since been explained by the presence of oxidizing agents on the surface of Mars. These oxidants may degrade abiotic or biological organics, resulting in their nondetection in the regolith. As several exploration missions currently focus on the detection of organics on Mars (or will do so in the near future), knowledge of the oxidative state of the surface is fundamental. It will allow for determination of the capability of organics to survive on a geological timescale, the most favorable places to seek them, and the best methods to process the samples collected at the surface. With this aim, we review the main oxidants assumed to be present on Mars, their possible formation pathways, and those laboratory studies in which their reactivity with organics under Mars-like conditions has been evaluated. Among the oxidants assumed to be present on Mars, only four have been detected so far: perchlorate ions (ClO4-) in salts, hydrogen peroxide (H2O2) in the atmosphere, and clays and metal oxides composing surface minerals. Clays have been suggested as catalysts for the oxidation of organics but are treated as oxidants in the following to keep the structure of this article straightforward. This work provides an insight into the oxidizing potential of the surface of Mars and an estimate of the stability of organic matter in an oxidizing environment. Key Words: Mars surface-Astrobiology-Oxidant-Chemical reactions. Astrobiology 16, 977-996.
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Affiliation(s)
- J Lasne
- 1 LISA, Universités Paris-Est Créteil and Paris Diderot, Institut Pierre Simon Laplace , CNRS UMR 7583, Créteil, France
| | - A Noblet
- 1 LISA, Universités Paris-Est Créteil and Paris Diderot, Institut Pierre Simon Laplace , CNRS UMR 7583, Créteil, France
| | - C Szopa
- 2 LATMOS, UPMC Université Paris 06, Université Versailles St Quentin , CNRS, Guyancourt, France
| | - R Navarro-González
- 3 Laboratorio de Química de Plasmas y Estudios Planetarios, Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de México , Ciudad de México, México
| | - M Cabane
- 2 LATMOS, UPMC Université Paris 06, Université Versailles St Quentin , CNRS, Guyancourt, France
| | - O Poch
- 1 LISA, Universités Paris-Est Créteil and Paris Diderot, Institut Pierre Simon Laplace , CNRS UMR 7583, Créteil, France
- 4 NCCR PlanetS, Physikalisches Institut, Universität Bern , Bern, Switzerland
| | - F Stalport
- 1 LISA, Universités Paris-Est Créteil and Paris Diderot, Institut Pierre Simon Laplace , CNRS UMR 7583, Créteil, France
| | - P François
- 1 LISA, Universités Paris-Est Créteil and Paris Diderot, Institut Pierre Simon Laplace , CNRS UMR 7583, Créteil, France
- 5 IC2MP, Equipe Eau Géochimie Santé, Université de Poitiers , CNRS UMR 7285, Poitiers, France
| | - S K Atreya
- 6 Department of Climate and Space Sciences, University of Michigan , Ann Arbor, Michigan, USA
| | - P Coll
- 1 LISA, Universités Paris-Est Créteil and Paris Diderot, Institut Pierre Simon Laplace , CNRS UMR 7583, Créteil, France
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McCaig HC, Stockton A, Crilly C, Chung S, Kanik I, Lin Y, Zhong F. Supercritical Carbon Dioxide Extraction of Coronene in the Presence of Perchlorate for In Situ Chemical Analysis of Martian Regolith. ASTROBIOLOGY 2016; 16:703-714. [PMID: 27623199 DOI: 10.1089/ast.2015.1443] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
UNLABELLED The analysis of the organic compounds present in the martian regolith is essential for understanding the history and habitability of Mars, as well as studying the signs of possible extant or extinct life. To date, pyrolysis, the only technique that has been used to extract organic compounds from the martian regolith, has not enabled the detection of unaltered native martian organics. The elevated temperatures required for pyrolysis extraction can cause native martian organics to react with perchlorate salts in the regolith and possibly result in the chlorohydrocarbons that have been detected by in situ instruments. Supercritical carbon dioxide (SCCO2) extraction is an alternative to pyrolysis that may be capable of delivering unaltered native organic species to an in situ detector. In this study, we report the SCCO2 extraction of unaltered coronene, a representative polycyclic aromatic hydrocarbon (PAH), from martian regolith simulants, in the presence of 3 parts per thousand (ppth) sodium perchlorate. PAHs are a class of nonpolar molecules of astrobiological interest and are delivered to the martian surface by meteoritic infall. We also determined that the extraction efficiency of coronene was unaffected by the presence of perchlorate on the regolith simulant, and that no sodium perchlorate was extracted by SCCO2. This indicates that SCCO2 extraction can provide de-salted samples that could be directly delivered to a variety of in situ detectors. SCCO2 was also used to extract trace native fluorescent organic compounds from the martian regolith simulant JSC Mars-1, providing further evidence that SCCO2 extraction may provide an alternative to pyrolysis to enable the delivery of unaltered native organic compounds to an in situ detector on a future Mars rover. KEY WORDS Biomarkers-Carbon dioxide-In situ measurement-Mars-Search for Mars' organics. Astrobiology 16, 703-714.
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Affiliation(s)
- Heather C McCaig
- 1 Jet Propulsion Laboratory, California Institute of Technology , Pasadena, California
| | | | - Candice Crilly
- 1 Jet Propulsion Laboratory, California Institute of Technology , Pasadena, California
- 3 Occidental College , Los Angeles, California
| | - Shirley Chung
- 1 Jet Propulsion Laboratory, California Institute of Technology , Pasadena, California
| | - Isik Kanik
- 1 Jet Propulsion Laboratory, California Institute of Technology , Pasadena, California
| | - Ying Lin
- 1 Jet Propulsion Laboratory, California Institute of Technology , Pasadena, California
| | - Fang Zhong
- 1 Jet Propulsion Laboratory, California Institute of Technology , Pasadena, California
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59
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Montgomery W, Bromiley GD, Sephton MA. The nature of organic records in impact excavated rocks on Mars. Sci Rep 2016; 6:30947. [PMID: 27492071 PMCID: PMC4974657 DOI: 10.1038/srep30947] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2016] [Accepted: 07/11/2016] [Indexed: 11/09/2022] Open
Abstract
Impact ejected rocks are targets for life detection missions to Mars. The Martian subsurface is more favourable to organic preservation than the surface owing to an attenuation of radiation and physical separation from oxidising materials with increasing depth. Impact events bring materials to the surface where they may be accessed without complicated drilling procedures. On Earth, different assemblages of organic matter types are derived from varying depositional environments. Here we assess whether these different types of organic materials can survive impact events without corruption. We subjected four terrestrial organic matter types to elevated pressures and temperatures in piston-cylinder experiments followed by chemical characterisation using whole-rock pyrolysis-gas chromatography-mass spectrometry. Our data reveal that long chain hydrocarbon-dominated organic matter (types I and II; mainly microbial or algal) are unresistant to pressure whereas aromatic hydrocarbon-dominated organic matter types (types III and IV; mainly land plant, metamorphosed or degraded, displaying some superficial chemical similarities to abiotic meteoritic organic matter) are relatively resistant. This suggests that the impact excavated record of potential biology on Mars will be unavoidably biased, with microbial organic matter underrepresented while metamorphosed, degraded or abiotic meteoritic organic matter types will be selectively preserved.
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Affiliation(s)
- W Montgomery
- Impacts and Astromaterials Research Centre, Department of Earth Science and Engineering, Imperial College London, SW7 2AZ, UK
| | - G D Bromiley
- School of GeoSciences, University of Edinburgh, Grant Institute, West Main Road, Edinburgh EH9 3JW, UK
| | - M A Sephton
- Impacts and Astromaterials Research Centre, Department of Earth Science and Engineering, Imperial College London, SW7 2AZ, UK
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60
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Domagal-Goldman SD, Wright KE, Adamala K, Arina de la Rubia L, Bond J, Dartnell LR, Goldman AD, Lynch K, Naud ME, Paulino-Lima IG, Singer K, Walther-Antonio M, Abrevaya XC, Anderson R, Arney G, Atri D, Azúa-Bustos A, Bowman JS, Brazelton WJ, Brennecka GA, Carns R, Chopra A, Colangelo-Lillis J, Crockett CJ, DeMarines J, Frank EA, Frantz C, de la Fuente E, Galante D, Glass J, Gleeson D, Glein CR, Goldblatt C, Horak R, Horodyskyj L, Kaçar B, Kereszturi A, Knowles E, Mayeur P, McGlynn S, Miguel Y, Montgomery M, Neish C, Noack L, Rugheimer S, Stüeken EE, Tamez-Hidalgo P, Imari Walker S, Wong T. The Astrobiology Primer v2.0. ASTROBIOLOGY 2016; 16:561-653. [PMID: 27532777 PMCID: PMC5008114 DOI: 10.1089/ast.2015.1460] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2015] [Accepted: 06/06/2016] [Indexed: 05/09/2023]
Affiliation(s)
- Shawn D Domagal-Goldman
- 1 NASA Goddard Space Flight Center , Greenbelt, Maryland, USA
- 2 Virtual Planetary Laboratory , Seattle, Washington, USA
| | - Katherine E Wright
- 3 University of Colorado at Boulder , Colorado, USA
- 4 Present address: UK Space Agency, UK
| | - Katarzyna Adamala
- 5 Department of Genetics, Cell Biology and Development, University of Minnesota , Minneapolis, Minnesota, USA
| | | | - Jade Bond
- 7 Department of Physics, University of New South Wales , Sydney, Australia
| | | | | | - Kennda Lynch
- 10 Division of Biological Sciences, University of Montana , Missoula, Montana, USA
| | - Marie-Eve Naud
- 11 Institute for research on exoplanets (iREx) , Université de Montréal, Montréal, Canada
| | - Ivan G Paulino-Lima
- 12 Universities Space Research Association , Mountain View, California, USA
- 13 Blue Marble Space Institute of Science , Seattle, Washington, USA
| | - Kelsi Singer
- 14 Southwest Research Institute , Boulder, Colorado, USA
| | | | - Ximena C Abrevaya
- 16 Instituto de Astronomía y Física del Espacio (IAFE) , UBA-CONICET, Ciudad Autónoma de Buenos Aires, Argentina
| | - Rika Anderson
- 17 Department of Biology, Carleton College , Northfield, Minnesota, USA
| | - Giada Arney
- 18 University of Washington Astronomy Department and Astrobiology Program , Seattle, Washington, USA
| | - Dimitra Atri
- 13 Blue Marble Space Institute of Science , Seattle, Washington, USA
| | | | - Jeff S Bowman
- 19 Lamont-Doherty Earth Observatory, Columbia University , Palisades, New York, USA
| | | | | | - Regina Carns
- 22 Polar Science Center, Applied Physics Laboratory, University of Washington , Seattle, Washington, USA
| | - Aditya Chopra
- 23 Planetary Science Institute, Research School of Earth Sciences, Research School of Astronomy and Astrophysics, The Australian National University , Canberra, Australia
| | - Jesse Colangelo-Lillis
- 24 Earth and Planetary Science, McGill University , and the McGill Space Institute, Montréal, Canada
| | | | - Julia DeMarines
- 13 Blue Marble Space Institute of Science , Seattle, Washington, USA
| | | | - Carie Frantz
- 27 Department of Geosciences, Weber State University , Ogden, Utah, USA
| | - Eduardo de la Fuente
- 28 IAM-Departamento de Fisica, CUCEI , Universidad de Guadalajara, Guadalajara, México
| | - Douglas Galante
- 29 Brazilian Synchrotron Light Laboratory , Campinas, Brazil
| | - Jennifer Glass
- 30 School of Earth and Atmospheric Sciences, Georgia Institute of Technology , Atlanta, Georgia , USA
| | | | | | - Colin Goldblatt
- 33 School of Earth and Ocean Sciences, University of Victoria , Victoria, Canada
| | - Rachel Horak
- 34 American Society for Microbiology , Washington, DC, USA
| | | | - Betül Kaçar
- 36 Harvard University , Organismic and Evolutionary Biology, Cambridge, Massachusetts, USA
| | - Akos Kereszturi
- 37 Research Centre for Astronomy and Earth Sciences , Hungarian Academy of Sciences, Budapest, Hungary
| | - Emily Knowles
- 38 Johnson & Wales University , Denver, Colorado, USA
| | - Paul Mayeur
- 39 Rensselaer Polytechnic Institute , Troy, New York, USA
| | - Shawn McGlynn
- 40 Earth Life Science Institute, Tokyo Institute of Technology , Tokyo, Japan
| | - Yamila Miguel
- 41 Laboratoire Lagrange, UMR 7293, Université Nice Sophia Antipolis , CNRS, Observatoire de la Côte d'Azur, Nice, France
| | | | - Catherine Neish
- 43 Department of Earth Sciences, The University of Western Ontario , London, Canada
| | - Lena Noack
- 44 Royal Observatory of Belgium , Brussels, Belgium
| | - Sarah Rugheimer
- 45 Department of Astronomy, Harvard University , Cambridge, Massachusetts, USA
- 46 University of St. Andrews , St. Andrews, UK
| | - Eva E Stüeken
- 47 University of Washington , Seattle, Washington, USA
- 48 University of California , Riverside, California, USA
| | | | - Sara Imari Walker
- 13 Blue Marble Space Institute of Science , Seattle, Washington, USA
- 50 School of Earth and Space Exploration and Beyond Center for Fundamental Concepts in Science, Arizona State University , Tempe, Arizona, USA
| | - Teresa Wong
- 51 Department of Earth and Planetary Sciences, Washington University in St. Louis , St. Louis, Missouri, USA
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Abstract
A simple, heuristic formula with parallels to the Drake Equation is introduced to help focus discussion on open questions for the origins of life in a planetary context. This approach indicates a number of areas where quantitative progress can be made on parameter estimation for determining origins of life probabilities, based on constraints from Bayesian approaches. We discuss a variety of "microscale" factors and their role in determining "macroscale" abiogenesis probabilities on suitable planets. We also propose that impact ejecta exchange between planets with parallel chemistries and chemical evolution could in principle amplify the development of molecular complexity and abiogenesis probabilities. This amplification could be very significant, and both bias our conclusions about abiogenesis probabilities based on the Earth and provide a major source of variance in the probability of life arising in planetary systems. We use our heuristic formula to suggest a number of observational routes for improving constraints on origins of life probabilities.
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62
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Kim J, Stockton AM, Jensen EC, Mathies RA. Pneumatically actuated microvalve circuits for programmable automation of chemical and biochemical analysis. LAB ON A CHIP 2016; 16:812-9. [PMID: 26864083 DOI: 10.1039/c5lc01397f] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Programmable microfluidic platforms (PMPs) are enabling significant advances in the utility of microfluidics for chemical and biochemical analysis. Traditional microfluidic devices are analogous to application-specific devices--a new device is needed to implement each new chemical or biochemical assay. PMPs are analogous to digital electronic processors--all that is needed to implement a new assay is a change in the order of operations conducted by the device. In this review, we introduce PMPs based on normally-closed microvalves. We discuss recent applications of PMPs in diverse fields including genetic analysis, antibody-based biomarker analysis, and chemical analysis in planetary exploration. Prospects, challenges, and future concepts for this emerging technology will also be presented.
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Affiliation(s)
- Jungkyu Kim
- Department of Mechanical Engineering, Texas Tech University, Lubbock, TX, USA
| | - Amanda M Stockton
- Department of Chemistry, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | | | - Richard A Mathies
- Department of Chemistry, University of California, Berkeley, CA 94720, USA.
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63
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Schulze-Makuch D, Rummel JD, Benner SA, Levin G, Parro V, Kounaves S. Nearly Forty Years after Viking: Are We Ready for a New Life-Detection Mission? ASTROBIOLOGY 2015; 15:413-419. [PMID: 26053735 DOI: 10.1089/ast.2015.1336] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Affiliation(s)
- Dirk Schulze-Makuch
- 1 Washington State University , Pullman, Washington, USA, and Technical University Berlin, Germany
| | - John D Rummel
- 2 East Carolina University , Greenville, North Carolina, USA
| | - Steven A Benner
- 3 Foundation for Applied Molecular Evolution , Gainesville, Florida, USA
| | - Gilbert Levin
- 4 Beyond Center of the College of Liberal Arts and Sciences, Arizona State University , Tempe, Arizona, USA
| | - Victor Parro
- 5 Department of Molecular Evolution, Centro de Astrobiología (INTA-CSIC), Madrid, Spain
| | - Samuel Kounaves
- 6 Tufts University , Medford, Massachusetts, USA, and Imperial College London, UK
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64
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Lewis JMT, Watson JS, Najorka J, Luong D, Sephton MA. Sulfate minerals: a problem for the detection of organic compounds on Mars? ASTROBIOLOGY 2015; 15:247-58. [PMID: 25695727 PMCID: PMC4363818 DOI: 10.1089/ast.2014.1160] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2014] [Accepted: 12/27/2014] [Indexed: 05/20/2023]
Abstract
The search for in situ organic matter on Mars involves encounters with minerals and requires an understanding of their influence on lander and rover experiments. Inorganic host materials can be helpful by aiding the preservation of organic compounds or unhelpful by causing the destruction of organic matter during thermal extraction steps. Perchlorates are recognized as confounding minerals for thermal degradation studies. On heating, perchlorates can decompose to produce oxygen, which then oxidizes organic matter. Other common minerals on Mars, such as sulfates, may also produce oxygen upon thermal decay, presenting an additional complication. Different sulfate species decompose within a large range of temperatures. We performed a series of experiments on a sample containing the ferric sulfate jarosite. The sulfate ions within jarosite break down from 500 °C. Carbon dioxide detected during heating of the sample was attributed to oxidation of organic matter. A laboratory standard of ferric sulfate hydrate released sulfur dioxide from 550 °C, and an oxygen peak was detected in the products. Calcium sulfate did not decompose below 1000 °C. Oxygen released from sulfate minerals may have already affected organic compound detection during in situ thermal experiments on Mars missions. A combination of preliminary mineralogical analyses and suitably selected pyrolysis temperatures may increase future success in the search for past or present life on Mars.
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Affiliation(s)
- James M T Lewis
- 1 Impacts and Astromaterials Research Centre, Department of Earth Science and Engineering, Imperial College London , London, United Kingdom
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65
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Freissinet C, Glavin DP, Mahaffy PR, Miller KE, Eigenbrode JL, Summons RE, Brunner AE, Buch A, Szopa C, Archer PD, Franz HB, Atreya SK, Brinckerhoff WB, Cabane M, Coll P, Conrad PG, Des Marais DJ, Dworkin JP, Fairén AG, François P, Grotzinger JP, Kashyap S, ten Kate IL, Leshin LA, Malespin CA, Martin MG, Martin-Torres FJ, McAdam AC, Ming DW, Navarro-González R, Pavlov AA, Prats BD, Squyres SW, Steele A, Stern JC, Sumner DY, Sutter B, Zorzano MP. Organic molecules in the Sheepbed Mudstone, Gale Crater, Mars. JOURNAL OF GEOPHYSICAL RESEARCH. PLANETS 2015; 120:495-514. [PMID: 26690960 PMCID: PMC4672966 DOI: 10.1002/2014je004737] [Citation(s) in RCA: 168] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2014] [Revised: 01/12/2015] [Accepted: 02/13/2015] [Indexed: 05/04/2023]
Abstract
UNLABELLED The Sample Analysis at Mars (SAM) instrument on board the Mars Science Laboratory Curiosity rover is designed to conduct inorganic and organic chemical analyses of the atmosphere and the surface regolith and rocks to help evaluate the past and present habitability potential of Mars at Gale Crater. Central to this task is the development of an inventory of any organic molecules present to elucidate processes associated with their origin, diagenesis, concentration, and long-term preservation. This will guide the future search for biosignatures. Here we report the definitive identification of chlorobenzene (150-300 parts per billion by weight (ppbw)) and C2 to C4 dichloroalkanes (up to 70 ppbw) with the SAM gas chromatograph mass spectrometer (GCMS) and detection of chlorobenzene in the direct evolved gas analysis (EGA) mode, in multiple portions of the fines from the Cumberland drill hole in the Sheepbed mudstone at Yellowknife Bay. When combined with GCMS and EGA data from multiple scooped and drilled samples, blank runs, and supporting laboratory analog studies, the elevated levels of chlorobenzene and the dichloroalkanes cannot be solely explained by instrument background sources known to be present in SAM. We conclude that these chlorinated hydrocarbons are the reaction products of Martian chlorine and organic carbon derived from Martian sources (e.g., igneous, hydrothermal, atmospheric, or biological) or exogenous sources such as meteorites, comets, or interplanetary dust particles. KEY POINTS First in situ evidence of nonterrestrial organics in Martian surface sediments Chlorinated hydrocarbons identified in the Sheepbed mudstone by SAM Organics preserved in sample exposed to ionizing radiation and oxidative condition.
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Affiliation(s)
- C Freissinet
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
- NASA Postdoctoral Program, Oak Ridge Associated UniversitiesOak Ridge, Tennessee, USA
- Correspondence to:
C. Freissinet and P. R. Mahaffy,, ,
| | - D P Glavin
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
| | - P R Mahaffy
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
- Correspondence to:
C. Freissinet and P. R. Mahaffy,, ,
| | - K E Miller
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of TechnologyCambridge, Massachusetts, USA
| | - J L Eigenbrode
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
| | - R E Summons
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of TechnologyCambridge, Massachusetts, USA
| | - A E Brunner
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
- Center for Research and Exploration in Space Science & Technology, University of MarylandCollege Park, Maryland, USA
| | - A Buch
- Laboratoire de Génie des Procédés et Matériaux, Ecole Centrale ParisChâtenay-Malabry, France
| | - C Szopa
- Laboratoire Atmosphères, Milieux, Observations Spatiales, Pierre and Marie Curie University, Université de Versailles Saint-Quentin-en-Yvelines, and CNRSParis, France
| | - P D Archer
- Jacobs, NASA Johnson Space CenterHouston, Texas, USA
| | - H B Franz
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
- Center for Research and Exploration in Space Science & Technology, University of Maryland, Baltimore CountyBaltimore, Maryland, USA
| | - S K Atreya
- Department of Atmospheric, Oceanic and Space Sciences, University of MichiganAnn Arbor, Michigan, USA
| | - W B Brinckerhoff
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
| | - M Cabane
- Laboratoire Atmosphères, Milieux, Observations Spatiales, Pierre and Marie Curie University, Université de Versailles Saint-Quentin-en-Yvelines, and CNRSParis, France
| | - P Coll
- Laboratoire Interuniversitaire des Systèmes Atmosphériques, Université Paris-Est Créteil, Paris VII–Denis Diderot University, and CNRSCréteil, France
| | - P G Conrad
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
| | - D J Des Marais
- Exobiology Branch, NASA Ames Research CenterMoffett Field, California, USA
| | - J P Dworkin
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
| | - A G Fairén
- Department of Astronomy, Cornell UniversityIthaca, New York, USA
- Centro de Astrobiología, INTA-CSICMadrid, Spain
| | - P François
- Department of Atmospheric, Oceanic and Space Sciences, University of MichiganAnn Arbor, Michigan, USA
| | - J P Grotzinger
- Division of Geological and Planetary Sciences, California Institute of TechnologyPasadena, California, USA
| | - S Kashyap
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
- Center for Research and Exploration in Space Science & Technology, University of Maryland, Baltimore CountyBaltimore, Maryland, USA
| | - I L ten Kate
- Earth Sciences Department, Utrecht UniversityUtrecht, Netherlands
| | - L A Leshin
- Department of Earth and Environmental Sciences and School of Science, Rensselaer Polytechnic InstituteTroy, New York, USA
| | - C A Malespin
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
- Goddard Earth Sciences and Technologies and Research, Universities Space Research AssociationColumbia, Maryland, USA
| | - M G Martin
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
- Department of Chemistry, Catholic University of AmericaWashington, District of Columbia, USA
| | - F J Martin-Torres
- Instituto Andaluz de Ciencias de la Tierra (CSIC-UGR)Granada, Spain
- Division of Space Technology, Department of Computer Science, Electrical and Space Engineering, Luleå University of TechnologyKiruna, Sweden
| | - A C McAdam
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
| | - D W Ming
- Astromaterials Research and Exploration Science Directorate, NASA Johnson Space CenterHouston, Texas, USA
| | - R Navarro-González
- Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de México, Ciudad UniversitariaMéxico City, Mexico
| | - A A Pavlov
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
| | - B D Prats
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
| | - S W Squyres
- Department of Astronomy, Cornell UniversityIthaca, New York, USA
| | - A Steele
- Geophysical Laboratory, Carnegie Institution of WashingtonWashington, District of Columbia, USA
| | - J C Stern
- Solar System Exploration Division, NASA Goddard Space Flight CenterGreenbelt, Maryland, USA
| | - D Y Sumner
- Department of Earth and Planetary Sciences, University of CaliforniaDavis, California, USA
| | - B Sutter
- Jacobs, NASA Johnson Space CenterHouston, Texas, USA
| | - M-P Zorzano
- Centro de Astrobiologia (INTA-CSIC)Madrid, Spain
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66
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Freissinet C, Glavin DP, Mahaffy PR, Miller KE, Eigenbrode JL, Summons RE, Brunner AE, Buch A, Szopa C, Archer PD, Franz HB, Atreya SK, Brinckerhoff WB, Cabane M, Coll P, Conrad PG, Des Marais DJ, Dworkin JP, Fairén AG, François P, Grotzinger JP, Kashyap S, Ten Kate IL, Leshin LA, Malespin CA, Martin MG, Martin-Torres FJ, McAdam AC, Ming DW, Navarro-González R, Pavlov AA, Prats BD, Squyres SW, Steele A, Stern JC, Sumner DY, Sutter B, Zorzano MP. Organic molecules in the Sheepbed Mudstone, Gale Crater, Mars. JOURNAL OF GEOPHYSICAL RESEARCH. PLANETS 2015; 120:495-514. [PMID: 26690960 DOI: 10.1002/2015je004884.received] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 10/03/2014] [Revised: 01/12/2015] [Accepted: 02/13/2015] [Indexed: 05/25/2023]
Abstract
UNLABELLED The Sample Analysis at Mars (SAM) instrument on board the Mars Science Laboratory Curiosity rover is designed to conduct inorganic and organic chemical analyses of the atmosphere and the surface regolith and rocks to help evaluate the past and present habitability potential of Mars at Gale Crater. Central to this task is the development of an inventory of any organic molecules present to elucidate processes associated with their origin, diagenesis, concentration, and long-term preservation. This will guide the future search for biosignatures. Here we report the definitive identification of chlorobenzene (150-300 parts per billion by weight (ppbw)) and C2 to C4 dichloroalkanes (up to 70 ppbw) with the SAM gas chromatograph mass spectrometer (GCMS) and detection of chlorobenzene in the direct evolved gas analysis (EGA) mode, in multiple portions of the fines from the Cumberland drill hole in the Sheepbed mudstone at Yellowknife Bay. When combined with GCMS and EGA data from multiple scooped and drilled samples, blank runs, and supporting laboratory analog studies, the elevated levels of chlorobenzene and the dichloroalkanes cannot be solely explained by instrument background sources known to be present in SAM. We conclude that these chlorinated hydrocarbons are the reaction products of Martian chlorine and organic carbon derived from Martian sources (e.g., igneous, hydrothermal, atmospheric, or biological) or exogenous sources such as meteorites, comets, or interplanetary dust particles. KEY POINTS First in situ evidence of nonterrestrial organics in Martian surface sediments Chlorinated hydrocarbons identified in the Sheepbed mudstone by SAM Organics preserved in sample exposed to ionizing radiation and oxidative condition.
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Affiliation(s)
- C Freissinet
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA ; NASA Postdoctoral Program, Oak Ridge Associated Universities Oak Ridge, Tennessee, USA
| | - D P Glavin
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA
| | - P R Mahaffy
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA
| | - K E Miller
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology Cambridge, Massachusetts, USA
| | - J L Eigenbrode
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA
| | - R E Summons
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology Cambridge, Massachusetts, USA
| | - A E Brunner
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA ; Center for Research and Exploration in Space Science & Technology, University of Maryland College Park, Maryland, USA
| | - A Buch
- Laboratoire de Génie des Procédés et Matériaux, Ecole Centrale Paris Châtenay-Malabry, France
| | - C Szopa
- Laboratoire Atmosphères, Milieux, Observations Spatiales, Pierre and Marie Curie University, Université de Versailles Saint-Quentin-en-Yvelines, and CNRS Paris, France
| | - P D Archer
- Jacobs, NASA Johnson Space Center Houston, Texas, USA
| | - H B Franz
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA ; Center for Research and Exploration in Space Science & Technology, University of Maryland, Baltimore County Baltimore, Maryland, USA
| | - S K Atreya
- Department of Atmospheric, Oceanic and Space Sciences, University of Michigan Ann Arbor, Michigan, USA
| | - W B Brinckerhoff
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA
| | - M Cabane
- Laboratoire Atmosphères, Milieux, Observations Spatiales, Pierre and Marie Curie University, Université de Versailles Saint-Quentin-en-Yvelines, and CNRS Paris, France
| | - P Coll
- Laboratoire Interuniversitaire des Systèmes Atmosphériques, Université Paris-Est Créteil, Paris VII-Denis Diderot University, and CNRS Créteil, France
| | - P G Conrad
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA
| | - D J Des Marais
- Exobiology Branch, NASA Ames Research Center Moffett Field, California, USA
| | - J P Dworkin
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA
| | - A G Fairén
- Department of Astronomy, Cornell University Ithaca, New York, USA ; Centro de Astrobiología, INTA-CSIC Madrid, Spain
| | - P François
- Department of Atmospheric, Oceanic and Space Sciences, University of Michigan Ann Arbor, Michigan, USA
| | - J P Grotzinger
- Division of Geological and Planetary Sciences, California Institute of Technology Pasadena, California, USA
| | - S Kashyap
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA ; Center for Research and Exploration in Space Science & Technology, University of Maryland, Baltimore County Baltimore, Maryland, USA
| | - I L Ten Kate
- Earth Sciences Department, Utrecht University Utrecht, Netherlands
| | - L A Leshin
- Department of Earth and Environmental Sciences and School of Science, Rensselaer Polytechnic Institute Troy, New York, USA
| | - C A Malespin
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA ; Goddard Earth Sciences and Technologies and Research, Universities Space Research Association Columbia, Maryland, USA
| | - M G Martin
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA ; Department of Chemistry, Catholic University of America Washington, District of Columbia, USA
| | - F J Martin-Torres
- Instituto Andaluz de Ciencias de la Tierra (CSIC-UGR) Granada, Spain ; Division of Space Technology, Department of Computer Science, Electrical and Space Engineering, Luleå University of Technology Kiruna, Sweden
| | - A C McAdam
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA
| | - D W Ming
- Astromaterials Research and Exploration Science Directorate, NASA Johnson Space Center Houston, Texas, USA
| | - R Navarro-González
- Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de México, Ciudad Universitaria México City, Mexico
| | - A A Pavlov
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA
| | - B D Prats
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA
| | - S W Squyres
- Department of Astronomy, Cornell University Ithaca, New York, USA
| | - A Steele
- Geophysical Laboratory, Carnegie Institution of Washington Washington, District of Columbia, USA
| | - J C Stern
- Solar System Exploration Division, NASA Goddard Space Flight Center Greenbelt, Maryland, USA
| | - D Y Sumner
- Department of Earth and Planetary Sciences, University of California Davis, California, USA
| | - B Sutter
- Jacobs, NASA Johnson Space Center Houston, Texas, USA
| | - M-P Zorzano
- Centro de Astrobiologia (INTA-CSIC) Madrid, Spain
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Summons RE, Sessions AL, Allwood AC, Barton HA, Beaty DW, Blakkolb B, Canham J, Clark BC, Dworkin JP, Lin Y, Mathies R, Milkovich SM, Steele A. Planning considerations related to the organic contamination of Martian samples and implications for the Mars 2020 Rover. ASTROBIOLOGY 2014; 14:969-1027. [PMID: 25495496 DOI: 10.1089/ast.2014.1244] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Affiliation(s)
- R E Summons
- 1 Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology , Cambridge, Massachusetts
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68
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Johnson PV, Hodyss R, Beauchamp JL. Ion funnel augmented Mars atmospheric pressure photoionization mass spectrometry for in situ detection of organic molecules. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2014; 25:1832-1840. [PMID: 24986759 DOI: 10.1007/s13361-014-0930-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2014] [Revised: 05/12/2014] [Accepted: 05/12/2014] [Indexed: 06/03/2023]
Abstract
Laser desorption is an attractive technique for in situ sampling of organics on Mars given its relative simplicity. We demonstrate that under simulated Martian conditions (~2.5 Torr CO(2)) laser desorption of neutral species (e.g., polycyclic aromatic hydrocarbons), followed by ionization with a simple ultraviolet light source such as a discharge lamp, offers an effective means of sampling organics for detection and identification with a mass spectrometer. An electrodynamic ion funnel is employed to provide efficient ion collection in the ambient Martian environment. This experimental methodology enables in situ sampling of Martian organics with minimal complexity and maximum flexibility.
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Affiliation(s)
- Paul V Johnson
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, 91109, USA,
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69
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Rummel JD, Beaty DW, Jones MA, Bakermans C, Barlow NG, Boston PJ, Chevrier VF, Clark BC, de Vera JPP, Gough RV, Hallsworth JE, Head JW, Hipkin VJ, Kieft TL, McEwen AS, Mellon MT, Mikucki JA, Nicholson WL, Omelon CR, Peterson R, Roden EE, Sherwood Lollar B, Tanaka KL, Viola D, Wray JJ. A new analysis of Mars "Special Regions": findings of the second MEPAG Special Regions Science Analysis Group (SR-SAG2). ASTROBIOLOGY 2014; 14:887-968. [PMID: 25401393 DOI: 10.1089/ast.2014.1227] [Citation(s) in RCA: 163] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
A committee of the Mars Exploration Program Analysis Group (MEPAG) has reviewed and updated the description of Special Regions on Mars as places where terrestrial organisms might replicate (per the COSPAR Planetary Protection Policy). This review and update was conducted by an international team (SR-SAG2) drawn from both the biological science and Mars exploration communities, focused on understanding when and where Special Regions could occur. The study applied recently available data about martian environments and about terrestrial organisms, building on a previous analysis of Mars Special Regions (2006) undertaken by a similar team. Since then, a new body of highly relevant information has been generated from the Mars Reconnaissance Orbiter (launched in 2005) and Phoenix (2007) and data from Mars Express and the twin Mars Exploration Rovers (all 2003). Results have also been gleaned from the Mars Science Laboratory (launched in 2011). In addition to Mars data, there is a considerable body of new data regarding the known environmental limits to life on Earth-including the potential for terrestrial microbial life to survive and replicate under martian environmental conditions. The SR-SAG2 analysis has included an examination of new Mars models relevant to natural environmental variation in water activity and temperature; a review and reconsideration of the current parameters used to define Special Regions; and updated maps and descriptions of the martian environments recommended for treatment as "Uncertain" or "Special" as natural features or those potentially formed by the influence of future landed spacecraft. Significant changes in our knowledge of the capabilities of terrestrial organisms and the existence of possibly habitable martian environments have led to a new appreciation of where Mars Special Regions may be identified and protected. The SR-SAG also considered the impact of Special Regions on potential future human missions to Mars, both as locations of potential resources and as places that should not be inadvertently contaminated by human activity.
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Affiliation(s)
- John D Rummel
- 1 Department of Biology, East Carolina University , Greenville, North Carolina, USA
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70
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Aerts JW, Röling WFM, Elsaesser A, Ehrenfreund P. Biota and biomolecules in extreme environments on Earth: implications for life detection on Mars. Life (Basel) 2014; 4:535-65. [PMID: 25370528 PMCID: PMC4284457 DOI: 10.3390/life4040535] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2014] [Revised: 09/08/2014] [Accepted: 09/16/2014] [Indexed: 11/24/2022] Open
Abstract
The three main requirements for life as we know it are the presence of organic compounds, liquid water, and free energy. Several groups of organic compounds (e.g., amino acids, nucleobases, lipids) occur in all life forms on Earth and are used as diagnostic molecules, i.e., biomarkers, for the characterization of extant or extinct life. Due to their indispensability for life on Earth, these biomarkers are also prime targets in the search for life on Mars. Biomarkers degrade over time; in situ environmental conditions influence the preservation of those molecules. Nonetheless, upon shielding (e.g., by mineral surfaces), particular biomarkers can persist for billions of years, making them of vital importance in answering questions about the origins and limits of life on early Earth and Mars. The search for organic material and biosignatures on Mars is particularly challenging due to the hostile environment and its effect on organic compounds near the surface. In support of life detection on Mars, it is crucial to investigate analogue environments on Earth that resemble best past and present Mars conditions. Terrestrial extreme environments offer a rich source of information allowing us to determine how extreme conditions affect life and molecules associated with it. Extremophilic organisms have adapted to the most stunning conditions on Earth in environments with often unique geological and chemical features. One challenge in detecting biomarkers is to optimize extraction, since organic molecules can be low in abundance and can strongly adsorb to mineral surfaces. Methods and analytical tools in the field of life science are continuously improving. Amplification methods are very useful for the detection of low concentrations of genomic material but most other organic molecules are not prone to amplification methods. Therefore, a great deal depends on the extraction efficiency. The questions “what to look for”, “where to look”, and “how to look for it” require more of our attention to ensure the success of future life detection missions on Mars.
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Affiliation(s)
- Joost W Aerts
- Molecular Cell Physiology, Faculty of Earth and Life Sciences, VU University Amsterdam, de Boelelaan 1085, 1081 HV Amsterdam, The Netherlands.
| | - Wilfred F M Röling
- Molecular Cell Physiology, Faculty of Earth and Life Sciences, VU University Amsterdam, de Boelelaan 1085, 1081 HV Amsterdam, The Netherlands.
| | - Andreas Elsaesser
- Leiden Observatory, Leiden University, P.O. Box 9513, NL-2300 RA Leiden, The Netherlands.
| | - Pascale Ehrenfreund
- Leiden Observatory, Leiden University, P.O. Box 9513, NL-2300 RA Leiden, The Netherlands.
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71
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Siljeström S, Freissinet C, Goesmann F, Steininger H, Goetz W, Steele A, Amundsen H. Comparison of prototype and laboratory experiments on MOMA GCMS: results from the AMASE11 campaign. ASTROBIOLOGY 2014; 14:780-797. [PMID: 25238325 DOI: 10.1089/ast.2014.1197] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
The characterization of any organic molecules on Mars is a top-priority objective for the ExoMars European Space Agency-Russian Federal Space Agency joint mission. The main instrument for organic analysis on the ExoMars rover is the Mars Organic Molecule Analyzer (MOMA). In preparation for the upcoming mission in 2018, different Mars analog samples are studied with MOMA and include samples collected during the Arctic Mars Analog Svalbard Expedition (AMASE) to Svalbard, Norway. In this paper, we present results obtained from two different Mars analog sites visited during AMASE11, Colletthøgda and Botniahalvøya. Measurements were performed on the samples during AMASE11 with a MOMA gas chromatograph (GC) prototype connected to a commercial mass spectrometer (MS) and later in home institutions with commercial pyrolysis-GCMS instruments. In addition, derivatization experiments were performed on the samples during AMASE11 and in the laboratory. Three different samples were studied from the Colletthøgda that included one evaporite and two carbonate-bearing samples. Only a single sample was studied from the Botniahalvøya site, a weathered basalt covered by a shiny surface consisting of manganese and iron oxides. Organic molecules were detected in all four samples and included aromatics, long-chained hydrocarbons, amino acids, nucleobases, sugars, and carboxylic acids. Both pyrolysis and derivatization indicated the presence of extinct biota by the detection of carboxylic acids in the samples from Colletthøgda, while the presence of amino acids, nucleobases, carboxylic acids, and sugars indicated an active biota in the sample from Botniahalvøya. The results obtained with the prototype flight model in the field coupled with repeat measurements with commercial instruments within the laboratory were reassuringly similar. This demonstrates the performance of the MOMA instrument and validates that the instrument will aid researchers in their efforts to answer fundamental questions regarding the speciation and possible source of organic content on Mars.
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Affiliation(s)
- Sandra Siljeström
- 1 Department of Chemistry, Materials and Surfaces, SP Technical Research Institute of Sweden , Borås, Sweden
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72
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Court RW, Sims MR, Cullen DC, Sephton MA. Searching for life on Mars: degradation of surfactant solutions used in organic extraction experiments. ASTROBIOLOGY 2014; 14:733-752. [PMID: 25192400 DOI: 10.1089/ast.2013.1105] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Life-detection instruments on future Mars missions may use surfactant solutions to extract organic matter from samples of martian rocks. The thermal and radiation environments of space and Mars are capable of degrading these solutions, thereby reducing their ability to dissolve organic species. Successful extraction and detection of biosignatures on Mars requires an understanding of how degradation in extraterrestrial environments can affect surfactant performance. We exposed solutions of the surfactants polysorbate 80 (PS80), Zonyl FS-300, and poly[dimethylsiloxane-co-[3-(2-(2-hydroxyethoxy)ethoxy)propyl]methylsiloxane] (PDMSHEPMS) to elevated radiation and heat levels, combined with prolonged storage. Degradation was investigated by measuring changes in pH and electrical conductivity and by using the degraded solutions to extract a suite of organic compounds spiked onto grains of the martian soil simulant JSC Mars-1. Results indicate that the proton fluences expected during a mission to Mars do not cause significant degradation of surfactant compounds. Solutions of PS80 or PDMSHEPMS stored at -20 °C are able to extract the spiked standards with acceptable recovery efficiencies. Extraction efficiencies for spiked standards decrease progressively with increasing temperature, and prolonged storage at 60°C renders the surfactant solutions ineffective. Neither the presence of ascorbic acid nor the choice of solvent unequivocally alters the efficiency of extraction of the spiked standards. Since degradation of polysorbates has the potential to produce organic compounds that could be mistaken for indigenous martian organic matter, the polysiloxane PDMSHEPMS may be a superior choice of surfactant for the exploration of Mars.
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Affiliation(s)
- Richard W Court
- 1 Department of Earth Science and Engineering, Imperial College London , London, UK
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73
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Shelor CP, Dasgupta PK, Aubrey A, Davila AF, Lee MC, McKay CP, Liu Y, Noell AC. What can in situ ion chromatography offer for Mars exploration? ASTROBIOLOGY 2014; 14:577-588. [PMID: 24963874 DOI: 10.1089/ast.2013.1131] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
The successes of the Mars exploration program have led to our unprecedented knowledge of the geological, mineralogical, and elemental composition of the martian surface. To date, however, only one mission, the Phoenix lander, has specifically set out to determine the soluble chemistry of the martian surface. The surprising results, including the detection of perchlorate, demonstrated both the importance of performing soluble ion measurements and the need for improved instrumentation to unambiguously identify all the species present. Ion chromatography (IC) is the state-of-the-art technique for soluble ion analysis on Earth and would therefore be the ideal instrument to send to Mars. A flight IC system must necessarily be small, lightweight, low-power, and have low eluent consumption. We demonstrate here a breadboard system that addresses these issues by using capillary IC at low flow rates with an optimized eluent generator and suppressor. A mix of 12 ions known or plausible for the martian soil, including 4 (oxy)chlorine species, has been separated at flow rates ranging from 1 to 10 μL/min, requiring as little as 200 psi at 1.0 μL/min. This allowed the use of pneumatic displacement pumping from a pressurized aluminum eluent reservoir and the elimination of the high-pressure pump entirely (the single heaviest and most energy-intensive component). All ions could be separated and detected effectively from 0.5 to 100 μM, even when millimolar concentrations of perchlorate were present in the same mixtures.
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Affiliation(s)
- C Phillip Shelor
- 1 Department of Chemistry and Biochemistry, The University of Texas at Arlington , Arlington, Texas
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74
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Cockell CS. Trajectories of martian habitability. ASTROBIOLOGY 2014; 14:182-203. [PMID: 24506485 PMCID: PMC3929387 DOI: 10.1089/ast.2013.1106] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2013] [Accepted: 12/29/2013] [Indexed: 05/21/2023]
Abstract
Beginning from two plausible starting points-an uninhabited or inhabited Mars-this paper discusses the possible trajectories of martian habitability over time. On an uninhabited Mars, the trajectories follow paths determined by the abundance of uninhabitable environments and uninhabited habitats. On an inhabited Mars, the addition of a third environment type, inhabited habitats, results in other trajectories, including ones where the planet remains inhabited today or others where planetary-scale life extinction occurs. By identifying different trajectories of habitability, corresponding hypotheses can be described that allow for the various trajectories to be disentangled and ultimately a determination of which trajectory Mars has taken and the changing relative abundance of its constituent environments.
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Affiliation(s)
- Charles S Cockell
- UK Centre for Astrobiology, School of Physics and Astronomy, University of Edinburgh , Edinburgh, UK
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75
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Hassler DM, Zeitlin C, Wimmer-Schweingruber RF, Ehresmann B, Rafkin S, Eigenbrode JL, Brinza DE, Weigle G, Böttcher S, Böhm E, Burmeister S, Guo J, Köhler J, Martin C, Reitz G, Cucinotta FA, Kim MH, Grinspoon D, Bullock MA, Posner A, Gómez-Elvira J, Vasavada A, Grotzinger JP. Mars' surface radiation environment measured with the Mars Science Laboratory's Curiosity rover. Science 2013; 343:1244797. [PMID: 24324275 DOI: 10.1126/science.1244797] [Citation(s) in RCA: 236] [Impact Index Per Article: 19.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
The Radiation Assessment Detector (RAD) on the Mars Science Laboratory's Curiosity rover began making detailed measurements of the cosmic ray and energetic particle radiation environment on the surface of Mars on 7 August 2012. We report and discuss measurements of the absorbed dose and dose equivalent from galactic cosmic rays and solar energetic particles on the martian surface for ~300 days of observations during the current solar maximum. These measurements provide insight into the radiation hazards associated with a human mission to the surface of Mars and provide an anchor point with which to model the subsurface radiation environment, with implications for microbial survival times of any possible extant or past life, as well as for the preservation of potential organic biosignatures of the ancient martian environment.
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76
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Ming DW, Archer PD, Glavin DP, Eigenbrode JL, Franz HB, Sutter B, Brunner AE, Stern JC, Freissinet C, McAdam AC, Mahaffy PR, Cabane M, Coll P, Campbell JL, Atreya SK, Niles PB, Bell JF, Bish DL, Brinckerhoff WB, Buch A, Conrad PG, Des Marais DJ, Ehlmann BL, Fairén AG, Farley K, Flesch GJ, Francois P, Gellert R, Grant JA, Grotzinger JP, Gupta S, Herkenhoff KE, Hurowitz JA, Leshin LA, Lewis KW, McLennan SM, Miller KE, Moersch J, Morris RV, Navarro-González R, Pavlov AA, Perrett GM, Pradler I, Squyres SW, Summons RE, Steele A, Stolper EM, Sumner DY, Szopa C, Teinturier S, Trainer MG, Treiman AH, Vaniman DT, Vasavada AR, Webster CR, Wray JJ, Yingst RA. Volatile and organic compositions of sedimentary rocks in Yellowknife Bay, Gale crater, Mars. Science 2013; 343:1245267. [PMID: 24324276 DOI: 10.1126/science.1245267] [Citation(s) in RCA: 144] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
H2O, CO2, SO2, O2, H2, H2S, HCl, chlorinated hydrocarbons, NO, and other trace gases were evolved during pyrolysis of two mudstone samples acquired by the Curiosity rover at Yellowknife Bay within Gale crater, Mars. H2O/OH-bearing phases included 2:1 phyllosilicate(s), bassanite, akaganeite, and amorphous materials. Thermal decomposition of carbonates and combustion of organic materials are candidate sources for the CO2. Concurrent evolution of O2 and chlorinated hydrocarbons suggests the presence of oxychlorine phase(s). Sulfides are likely sources for sulfur-bearing species. Higher abundances of chlorinated hydrocarbons in the mudstone compared with Rocknest windblown materials previously analyzed by Curiosity suggest that indigenous martian or meteoritic organic carbon sources may be preserved in the mudstone; however, the carbon source for the chlorinated hydrocarbons is not definitively of martian origin.
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Affiliation(s)
- D W Ming
- Astromaterials Research and Exploration Science Directorate, NASA Johnson Space Center, Houston, TX 77058, USA
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77
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Enantiomeric separation of volatile organics by gas chromatography for the in situ analysis of extraterrestrial materials: kinetics and thermodynamics investigation of various chiral stationary phases. J Chromatogr A 2013; 1306:59-71. [PMID: 23921265 DOI: 10.1016/j.chroma.2013.07.058] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2013] [Revised: 07/13/2013] [Accepted: 07/15/2013] [Indexed: 11/20/2022]
Abstract
The performances of several commercial chiral capillary columns have been evaluated with the aim of determining the one most suitable for enantiomeric separation in a gas chromatograph onboard a space probe. We compared the GC-MS response of three capillary columns coated with different chiral stationary phases (CSP) using volatile chiral organic molecules which are potential markers of a prebiotic organic chemistry. The three different chiral capillary columns are Chirasil-Val, with an amino acid derivative CSP, ChiralDex-β-PM, with a CSP composed of dissolved permethylated β-cyclodextrins in polysiloxane, and Chirasil-Dex, with a CSP made of modified cyclodextrins chemically bonded to the polysiloxane backbone. Both kinetics and thermodynamics studies have been carried out to evaluate the chiral recognition potential in these different types of columns. The thermodynamic parameters also allow a better understanding of the driving forces affecting the retention and separation of the enantiomers. The Chirasil-Dex-CSP displays the best characteristics for an optimal resolution of the chiral compounds, without preliminary derivatization. This CSP had been chosen to be the only chiral column in the Sample Analysis at Mars (SAM) experiment onboard the current Mars Science Laboratory (MSL) mission, and is also part of the Mars Organic Molecules Analyzer (MOMA) gas chromatograph onboard the next Martian mission ExoMars. The use of this column could also be extended to all space missions aimed at studying chirality in space.
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78
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Schulze-Makuch D, Fairén AG, Davila A. Locally targeted ecosynthesis: a proactive in situ search for extant life on other worlds. ASTROBIOLOGY 2013; 13:674-678. [PMID: 23848472 DOI: 10.1089/ast.2013.0995] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
The Viking landers conducted the only life-detection mission outside Earth nearly 40 years ago. We believe it is time to resume this proactive search for life and propose a new approach based on Locally Targeted Ecosynthesis (LoTE) missions: the engineering of local habitable hotspots on planetary surfaces to reveal any subdued biosphere and enhance the expression of its biological activity. LoTE missions are based on a minimum set of assumptions about life, namely, the need for liquid solvents, energy sources, and nutrients, and the limits imposed by UV and ionizing radiation. The most promising destinations for LoTE missions are Mars and Saturn's moon Titan. We describe two LoTE mission concepts that would enhance the unique environmental conditions on Mars and Titan to reveal a subdued biosphere easily detectable with conventional instruments by supplying biologically essential yet critically limited compounds and by engineering local habitable conditions.
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79
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Gerakines PA, Hudson RL. Glycine's radiolytic destruction in ices: first in situ laboratory measurements for Mars. ASTROBIOLOGY 2013; 13:647-655. [PMID: 23848469 DOI: 10.1089/ast.2012.0943] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
We report new laboratory studies of the radiation-induced destruction of glycine-containing ices for a range of temperatures and compositions that allow extrapolation to martian conditions. In situ infrared spectroscopy was used to study glycine decay rates as a function of temperature (from 15 to 280 K) and initial glycine concentrations in six mixtures whose compositions ranged from dry glycine to H2O+glycine (300:1). Results are presented in several systems of units, with cautions concerning their use. The half-life of glycine under the surface of Mars is estimated as an extrapolation of this data set to martian conditions, and trends in decay rates are described as are applications to Mars' near-surface chemistry.
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Affiliation(s)
- Perry A Gerakines
- Astrochemistry Laboratory, NASA Goddard Space Flight Center, Greenbelt, MD 20771, USA.
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80
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Kandiah M, Urban PL. Advances in ultrasensitive mass spectrometry of organic molecules. Chem Soc Rev 2013; 42:5299-322. [DOI: 10.1039/c3cs35389c] [Citation(s) in RCA: 56] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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81
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Moores JE, Schuerger AC. UV degradation of accreted organics on Mars: IDP longevity, surface reservoir of organics, and relevance to the detection of methane in the atmosphere. ACTA ACUST UNITED AC 2012. [DOI: 10.1029/2012je004060] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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82
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Scott VJ, Tse M, Shearn MJ, Siegel PH, Amashukeli X. An RF-powered micro-reactor for the detection of astrobiological target molecules on planetary bodies. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2012; 83:084102. [PMID: 22938313 DOI: 10.1063/1.4746994] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
We describe a sample-processing micro-reactor that utilizes 60 GHz RF radiation with approximately 730 mW of output power. The instrument design and performance characterization are described and then illustrated with modeling and experimental studies. The micro-reactor's efficiency on affecting hydrolysis of chemical bonds similar to those within large complex molecules was demonstrated: a disaccharide-sucrose-was hydrolyzed completely under micro-reactor conditions. The products of the micro-reactor-facilitated hydrolysis were analyzed using mass spectroscopy and proton nuclear magnetic resonance analytical techniques.
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Affiliation(s)
- Valerie J Scott
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California 91109, USA
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83
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Stroble ST, Kounaves SP. An electrochemically based total organic carbon analyzer for planetary and terrestrial on-site applications. Anal Chem 2012; 84:6271-6. [PMID: 22725848 DOI: 10.1021/ac301704m] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The search for organics on Mars began over 30 years ago. Neither the Viking GC/MS nor the more recent thermal and evolved gas analyzer (TEGA) aboard Phoenix were successful in detecting organics in the Martian soil. The most recent hypothesis for the "missing" Martian organics is thermal decomposition of organic material to CO(2) during the pyrolysis step of these analyses caused by the recently discovered ~1 wt % perchlorate in the Martian soil. To avoid this problem, an entirely different approach for the analysis of organics on Mars has been developed using an electrochemically based total organic carbon (TOC) analyzer, designated the Mars Organic Carbon Analyzer (MOCA). MOCA is designed as a small, lightweight, low-power instrument that electrochemically oxidizes organics to CO(2). The CO(2) is subsequently detected and quantified to determine the amount of TOC in the soil. MOCA can use the perchlorate present in the Martian soil to its advantage as an electrolyte, thus requiring only a buffered solution. Through a series of proof-of-concept tests, MOCA is shown to oxidize a variety of low-molecular-weight 1-5-carbon-containing molecules, including those containing carbon-13 using platinum and boron-doped diamond (BDD) electrodes at concentrations as low as 10 mg/kg. MOCA can also be used in terrestrial settings for on-site analysis of dissolved TOC.
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Affiliation(s)
- Shannon T Stroble
- Department of Chemistry, Tufts University, Medford, Massachusetts 02155, United States
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84
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Kereszturi A. Review of wet environment types on Mars with focus on duration and volumetric issues. ASTROBIOLOGY 2012; 12:586-600. [PMID: 22794300 DOI: 10.1089/ast.2011.0686] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
The astrobiological significance of certain environment types on Mars strongly depends on the temperature, duration, and chemistry of liquid water that was present there in the past. Recent works have focused on the identification of signs of ancient water on Mars, as it is more difficult to estimate the above-mentioned parameters. In this paper, two important factors are reviewed, the duration and the volume of water at different environment types on past and present Mars. Using currently available information, we can only roughly estimate these values, but as environment types show characteristic differences in this respect, it is worth comparing them and the result may have importance for research in astrobiology. Impact-induced and geothermal hydrothermal systems, lakes, and valley networks were in existence on Mars over the course of from 10(2) to 10(6) years, although they would have experienced substantially different temperature regimes. Ancient oceans, as well as water in outflow channels and gullies, and at the microscopic scale as interfacial water layers, would have had inherently different times of duration and overall volume: oceans may have endured from 10(4) to 10(6) years, while interfacial water would have had the smallest volume and residence time of liquid phase on Mars. Martian wet environments with longer residence times of liquid water are believed to have existed for that amount of time necessary for life to develop on Earth between the Late Heavy Bombardment and the age of the earliest fossil record. The results of this review show the necessity for more detailed analysis of conditions within geothermal heat-induced systems to reconstruct the conditions during weathering and mineral alteration, as well as to search for signs of reoccurring wet periods in ancient crater lakes.
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Affiliation(s)
- Akos Kereszturi
- Konkoly Thege Miklos Astronomical Institute, Research Centre for Astronomy and Earth Sciences, Hungarian Academy of Sciences, Budapest, Hungary.
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85
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Noblet A, Stalport F, Guan YY, Poch O, Coll P, Szopa C, Cloix M, Macari F, Raulin F, Chaput D, Cottin H. The PROCESS experiment: amino and carboxylic acids under Mars-like surface UV radiation conditions in low-earth orbit. ASTROBIOLOGY 2012; 12:436-444. [PMID: 22680690 DOI: 10.1089/ast.2011.0756] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
The search for organic molecules at the surface of Mars is a top priority of the next Mars exploration space missions: Mars Science Laboratory (NASA) and ExoMars (ESA). The detection of organic matter could provide information about the presence of a prebiotic chemistry or even biological activity on this planet. Therefore, a key step in interpretation of future data collected by these missions is to understand the preservation of organic matter in the martian environment. Several laboratory experiments have been devoted to quantifying and qualifying the evolution of organic molecules under simulated environmental conditions of Mars. However, these laboratory simulations are limited, and one major constraint is the reproduction of the UV spectrum that reaches the surface of Mars. As part of the PROCESS experiment of the European EXPOSE-E mission on board the International Space Station, a study was performed on the photodegradation of organics under filtered extraterrestrial solar electromagnetic radiation that mimics Mars-like surface UV radiation conditions. Glycine, serine, phthalic acid, phthalic acid in the presence of a mineral phase, and mellitic acid were exposed to these conditions for 1.5 years, and their evolution was determined by Fourier transform infrared spectroscopy after their retrieval. The results were compared with data from laboratory experiments. A 1.5-year exposure to Mars-like surface UV radiation conditions in space resulted in complete degradation of the organic compounds. Half-lives between 50 and 150 h for martian surface conditions were calculated from both laboratory and low-Earth orbit experiments. The results highlight that none of those organics are stable under low-Earth orbit solar UV radiation conditions.
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Affiliation(s)
- Audrey Noblet
- Laboratoire Interuniversitaire des Systèmes Atmosphériques (LISA), UMR CNRS 7583, Université Paris Est Créteil et Université Paris Diderot, Institut Pierre Simon Laplace, Créteil, France
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86
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Vítek P, Ali EMA, Edwards HGM, Jehlička J, Cox R, Page K. Evaluation of portable Raman spectrometer with 1064 nm excitation for geological and forensic applications. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2012; 86:320-7. [PMID: 22079176 DOI: 10.1016/j.saa.2011.10.043] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2011] [Revised: 08/26/2011] [Accepted: 10/17/2011] [Indexed: 05/16/2023]
Abstract
The development of miniaturized Raman instrumentation is in demand for applications relevant to forensic, pharmaceutical and art analyses, as well as geosciences, and planetary exploration. In this study we report on evaluation of a portable dispersive Raman spectrometer equipped with 1064 nm laser excitation. Selected samples from geological, geobiological and forensic areas of interest have been studied from which the advantages, disadvantages and the analytical potential of the instrument are assessed based on a comparison with bench instrumentation and other portable Raman spectrometers using 785 nm excitation. It is demonstrated that the instrument operating with 1064 nm excitation has potential for expanding the number and types of samples that can be measured by miniaturized Raman spectroscopy without interfering fluorescence background emission. It includes inorganic and organic minerals, biomolecules within living lichen and endolithic cyanobacteria as well as drugs of abuse and explosives.
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Affiliation(s)
- Petr Vítek
- Institute of Geochemistry, Mineralogy and Mineral Resources, Charles University in Prague, Albertov 6, 128 43 Prague 2, Czech Republic.
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87
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Benner SA, Kim HJ, Yang Z. Setting the stage: the history, chemistry, and geobiology behind RNA. Cold Spring Harb Perspect Biol 2012; 4:a003541. [PMID: 20880988 PMCID: PMC3249627 DOI: 10.1101/cshperspect.a003541] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
No community-accepted scientific methods are available today to guide studies on what role RNA played in the origin and early evolution of life on Earth. Further, a definition-theory for life is needed to develop hypotheses relating to the "RNA First" model for the origin of life. Four approaches are currently at various stages of development of such a definition-theory to guide these studies. These are (a) paleogenetics, in which inferences about the structure of past life are drawn from the structure of present life; (b) prebiotic chemistry, in which hypotheses with experimental support are sought that get RNA from organic and inorganic species possibly present on early Earth; (c) exploration, hoping to encounter life independent of terran life, which might contain RNA; and (d) synthetic biology, in which laboratories attempt to reproduce biological behavior with unnatural chemical systems.
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Affiliation(s)
- Steven A Benner
- Foundation for Applied Molecular Evolution, Gainesville, Florida 32601, USA.
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88
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Vítek P, Edwards HGM, Jehlička J, Cox R. Evaluation of portable Raman instrumentation for identification of β-carotene and mellitic acid in two-component mixtures with halite. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2011; 80:32-35. [PMID: 21296611 DOI: 10.1016/j.saa.2011.01.003] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2010] [Revised: 12/17/2010] [Accepted: 01/06/2011] [Indexed: 05/30/2023]
Abstract
Recently, portable Raman instrumentation has been in demand for geosciences and for future planetary exploration for the identification of both organic and inorganic compounds in situ on Earth and on other planetary bodies, especially on Mars. Here we present the results of the analysis of halite/β-carotene and halite/mellitic acid mixtures, performed by miniaturized Raman instrumentation equipped with 785 and 1064 nm excitation. Various proportions of organics in the halite matrix were examined. The lowest concentration of β-carotene detected using the 785 nm laser was 1 mg kg(-1), with slightly better signals observed with shorter exposure times compared with the bench instrument using the same excitation wavelength. Mellitic acid was identified at the concentration level 10 g kg(-1). The 1064 nm excitation provided a lower sensitivity towards low concentration when compared with the 785 nm excitation.
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Affiliation(s)
- P Vítek
- Institute of Geochemistry, Mineralogy and Mineral Resources, Charles University in Prague, Prague, Czech Republic.
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89
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Saladino R, Brucato JR, De Sio A, Botta G, Pace E, Gambicorti L. Photochemical synthesis of citric acid cycle intermediates based on titanium dioxide. ASTROBIOLOGY 2011; 11:815-824. [PMID: 22007741 DOI: 10.1089/ast.2011.0652] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
The emergence of the citric acid cycle is one of the most remarkable occurrences with regard to understanding the origin and evolution of metabolic pathways. Although the chemical steps of the cycle are preserved intact throughout nature, diverse organisms make wide use of its chemistry, and in some cases organisms use only a selected portion of the cycle. However, the origins of this cycle would have arisen in the more primitive anaerobic organism or even back in the proto-metabolism, which likely arose spontaneously under favorable prebiotic chemical conditions. In this context, we report that UV irradiation of formamide in the presence of titanium dioxide afforded 6 of the 11 carboxylic acid intermediates of the reductive version of the citric acid cycle. Since this cycle is the central metabolic pathway of contemporary biology, this report highlights the role of photochemical processes in the origin of the metabolic apparatus.
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Affiliation(s)
- Raffaele Saladino
- Department of Agrobiology and Agrochemistry, University of Tuscia, Viterbo, Italy
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90
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Stockton AM, Tjin CC, Chiesl TN, Mathies RA. Analysis of carbonaceous biomarkers with the Mars Organic Analyzer microchip capillary electrophoresis system: carboxylic acids. ASTROBIOLOGY 2011; 11:519-528. [PMID: 21790324 DOI: 10.1089/ast.2011.0634] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
The oxidizing surface chemistry on Mars argues that any comprehensive search for organic compounds indicative of life requires methods to analyze higher oxidation states of carbon with very low limits of detection. To address this goal, microchip capillary electrophoresis (μCE) methods were developed for analysis of carboxylic acids with the Mars Organic Analyzer (MOA). Fluorescent derivatization was achieved by activation with the water soluble 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (EDC) followed by reaction with Cascade Blue hydrazide in 30 mM borate, pH 3. A standard containing 12 carboxylic acids found in terrestrial life was successfully labeled and separated in 30 mM borate at pH 9.5, 20 °C by using the MOA CE system. Limits of detection were 5-10 nM for aliphatic monoacids, 20 nM for malic acid (diacid), and 230 nM for citric acid (triacid). Polyacid benzene derivatives containing 2, 3, 4, and 6 carboxyl groups were also analyzed. In particular, mellitic acid was successfully labeled and analyzed with a limit of detection of 300 nM (5 ppb). Analyses of carboxylic acids sampled from a lava tube cave and a hydrothermal area demonstrated the versatility and robustness of our method. This work establishes that the MOA can be used for sensitive analyses of a wide range of carboxylic acids in the search for extraterrestrial organic molecules.
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Affiliation(s)
- Amanda M Stockton
- Department of Chemistry, University of California, Berkeley, California 94720, USA
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91
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Preston LJ, Shuster J, Fernández-Remolar D, Banerjee NR, Osinski GR, Southam G. The preservation and degradation of filamentous bacteria and biomolecules within iron oxide deposits at Rio Tinto, Spain. GEOBIOLOGY 2011; 9:233-49. [PMID: 21443552 DOI: 10.1111/j.1472-4669.2011.00275.x] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
One of the keys to understanding and identifying life on other planets is to study the preservation of organic compounds and their precursor micro-organisms on Earth. Rio Tinto in southwestern Spain is a well documented site of microbial preservation within iron sulphates and iron oxides over a period of 2.1 Ma. This study has investigated the preservation of filamentous iron oxidising bacteria and organics through optical microscopy, scanning electron microscopy (SEM) and Fourier transform infra-red (FTIR) spectroscopy, from laboratory cultures of natural samples to contemporary natural materials to million-year old river terraces. Up to 40% elemental carbon and >7% nitrogen has been identified within microbial filaments and cell clusters in all samples through SEM EDS analyses. FTIR spectroscopy identified C-H(x) absorption bands between 2960 and 2800 cm(-1), Amide I and II absorption bands at 1656 and 1535 cm(-1), respectively and functional group vibrations from within nucleic acids at 917, 1016 and 1124 cm(-1). Absorption bands tracing the diagenetic transformation of jarosite to goethite to hematite through the samples are also identified. This combination of mineralogy, microbial morphology and biomolecular evidence allows us to further understand how organic fossils are created and preserved in iron-rich environments, and ultimately will aid in the search for the earliest life on Earth and potential organics on Mars.
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Affiliation(s)
- L J Preston
- Centre for Planetary Science and Exploration (CPSX), The University of Western Ontario, London, Ontario, Canada.
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92
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Léger A, Fontecave M, Labeyrie A, Samuel B, Demangeon O, Valencia D. Is the presence of oxygen on an exoplanet a reliable biosignature? ASTROBIOLOGY 2011; 11:335-41. [PMID: 21563960 DOI: 10.1089/ast.2010.0516] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
We revisit the validity of the presence of O(2) or O(3) in the atmosphere of a rocky planet as being a biosignature. Up to now, the false positive that has been identified applies to a planet during a hot greenhouse runaway, which is restricted to planets outside the habitable zone (HZ) of the star that are closer to the star. In this paper, we explore a new possibility based on abiotic photogeneration of O(2) at the surface of a planet that could occur inside the HZ. The search for such a process is an active field of laboratory investigation that has resulted from an ongoing interest in finding efficient systems with the capacity to harvest solar energy on Earth. Although such a process is energetically viable, we find it to be a very unlikely explanation for the observation of O(2) or O(3) in the atmosphere of a telluric exoplanet in the HZ. It requires an efficient photocatalyst to be present and abundant under natural planetary conditions, which appears unlikely according to our discussion of known mineral photochemical processes. In contrast, a biological system that synthesizes its constituents from abundant raw materials and energy has the inherent adaptation advantage to become widespread and dominant (Darwinist argument). Thus, O(2) appears to continue to be a good biosignature.
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Affiliation(s)
- A Léger
- 1 IAS, CNRS (UMR 8617), Université Paris-Sud, Orsay, France.
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93
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Shkrob IA, Marin TM, Chemerisov SD, Sevilla MD. Mechanistic aspects of photooxidation of polyhydroxylated molecules on metal oxides. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2011; 115:4642-4648. [PMID: 21532934 PMCID: PMC3083075 DOI: 10.1021/jp110612s] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
Polyhydroxylated molecules, including natural carbohydrates, are known to undergo photooxidation on wide-gap transition metal oxides irradiated by ultraviolet light. In this study, we examine mechanistic aspects of this photoreaction on aqueous TiO(2), α-FeOOH, and α-Fe(2)O(3) particles using electron paramagnetic resonance (EPR) spectroscopy and site-selective deuteration. We demonstrate that the carbohydrates are oxidized at sites involved in the formation of oxo-bridges between the chemisorbed carbohydrate molecule and metal ions at the oxide surface. This bridging inhibits the loss of water (which is the typical reaction of the analogous free radicals in bulk solvent) promoting instead a rearrangement that leads to elimination of the formyl radical. For natural carbohydrates, the latter reaction mainly involves carbon-1, whereas the main radical products of the oxidation are radical arising from H atom loss centered on carbon-1, -2, and -3 sites. Photoexcited TiO(2) oxidizes all of the carbohydrates and polyols, whereas α-FeOOH oxidizes some of the carbohydrates, and α-Fe(2)O(3) is unreactive. These results serve as a stepping stone for understanding the photochemistry on mineral surfaces of more complex biomolecules such as nucleic acids.
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Affiliation(s)
- Ilya A. Shkrob
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave, Argonne, IL 60439
| | - Timothy M. Marin
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave, Argonne, IL 60439
- Chemistry Department, Benedictine University, 5700 College Road, Lisle, IL 60532
| | - Sergey D. Chemerisov
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave, Argonne, IL 60439
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94
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Summons RE, Amend JP, Bish D, Buick R, Cody GD, Des Marais DJ, Dromart G, Eigenbrode JL, Knoll AH, Sumner DY. Preservation of martian organic and environmental records: final report of the Mars biosignature working group. ASTROBIOLOGY 2011; 11:157-81. [PMID: 21417945 DOI: 10.1089/ast.2010.0506] [Citation(s) in RCA: 88] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
The Mars Science Laboratory (MSL) has an instrument package capable of making measurements of past and present environmental conditions. The data generated may tell us if Mars is, or ever was, able to support life. However, the knowledge of Mars' past history and the geological processes most likely to preserve a record of that history remain sparse and, in some instances, ambiguous. Physical, chemical, and geological processes relevant to biosignature preservation on Earth, especially under conditions early in its history when microbial life predominated, are also imperfectly known. Here, we present the report of a working group chartered by the Co-Chairs of NASA's MSL Project Science Group, John P. Grotzinger and Michael A. Meyer, to review and evaluate potential for biosignature formation and preservation on Mars. Orbital images confirm that layered rocks achieved kilometer-scale thicknesses in some regions of ancient Mars. Clearly, interplays of sedimentation and erosional processes govern present-day exposures, and our understanding of these processes is incomplete. MSL can document and evaluate patterns of stratigraphic development as well as the sources of layered materials and their subsequent diagenesis. It can also document other potential biosignature repositories such as hydrothermal environments. These capabilities offer an unprecedented opportunity to decipher key aspects of the environmental evolution of Mars' early surface and aspects of the diagenetic processes that have operated since that time. Considering the MSL instrument payload package, we identified the following classes of biosignatures as within the MSL detection window: organism morphologies (cells, body fossils, casts), biofabrics (including microbial mats), diagnostic organic molecules, isotopic signatures, evidence of biomineralization and bioalteration, spatial patterns in chemistry, and biogenic gases. Of these, biogenic organic molecules and biogenic atmospheric gases are considered the most definitive and most readily detectable by MSL.
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Affiliation(s)
- Roger E Summons
- Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.
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95
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Shkrob IA, Marin TM, Adhikary A, Sevilla MD. Photooxidation of nucleic acids on metal oxides: physico-chemical and astrobiological perspectives. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2011; 115:3393-3403. [PMID: 21399705 PMCID: PMC3049938 DOI: 10.1021/jp110682c] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Photocatalytic oxidation of nucleic acid components on aqueous metal oxides (TiO(2), α-FeOOH, and α-Fe(2)O(3)) has been studied. The oxidation of purine nucleotides results in the formation of the purine radical cations and sugar-phosphate radicals, whereas the oxidation of pyrimidine nucleotides other than thymine results in the oxidation of only the sugar-phosphate. The oxidation of the thymine (and to a far less extent for the 5-methylcytosine) derivatives results in deprotonation from the methyl group of the base. Some single stranded (ss) oligoribonucleotides and wild-type ss RNA were oxidized at purine sites. In contrast, double stranded (ds) oligoribonucleotides and DNA were not oxidized. These results account for observations suggesting that cellular ds DNA is not damaged by exposure to photoirradiated TiO(2) nanoparticles inserted into the cell, whereas ss RNA is extensively damaged. The astrobiological import of our observations is that the rapid degradation of monomer nucleotides make them poor targets as biosignatures, whereas duplex DNA is a better target as it is resilient to oxidative diagenesis. Another import of our studies is that ds DNA (as opposed to ss RNA) appears to be optimized to withstand oxidative stress both due to the advantageous polymer morphology and the subtle details of its radical chemistry. This peculiarity may account for the preference for DNA over RNA as a "molecule of life" provided that metal oxides served as the template for synthesis of polynucleotides, as suggested by Orgel and others.
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Affiliation(s)
- Ilya A. Shkrob
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave, Argonne, IL 60439
| | - Timothy M. Marin
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave, Argonne, IL 60439
- Chemistry Department, Benedictine University, 5700 College Road, Lisle, IL 60532
| | - Amitava Adhikary
- Department of Chemistry, Oakland University, Rochester, Michigan 48309
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96
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Preservation Potential and Habitability of Clay Minerals- and Iron-Rich Environments: Novel Analogs for the 2011 Mars Science Laboratory Mission. ACTA ACUST UNITED AC 2011. [DOI: 10.1007/978-94-007-0397-1_32] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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97
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Parro V, de Diego-Castilla G, Rodríguez-Manfredi JA, Rivas LA, Blanco-López Y, Sebastián E, Romeral J, Compostizo C, Herrero PL, García-Marín A, Moreno-Paz M, García-Villadangos M, Cruz-Gil P, Peinado V, Martín-Soler J, Pérez-Mercader J, Gómez-Elvira J. SOLID3: a multiplex antibody microarray-based optical sensor instrument for in situ life detection in planetary exploration. ASTROBIOLOGY 2011; 11:15-28. [PMID: 21294639 DOI: 10.1089/ast.2010.0501] [Citation(s) in RCA: 61] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
The search for unequivocal signs of life on other planetary bodies is one of the major challenges for astrobiology. The failure to detect organic molecules on the surface of Mars by measuring volatile compounds after sample heating, together with the new knowledge of martian soil chemistry, has prompted the astrobiological community to develop new methods and technologies. Based on protein microarray technology, we have designed and built a series of instruments called SOLID (for "Signs Of LIfe Detector") for automatic in situ detection and identification of substances or analytes from liquid and solid samples (soil, sediments, or powder). Here, we present the SOLID3 instrument, which is able to perform both sandwich and competitive immunoassays and consists of two separate functional units: a Sample Preparation Unit (SPU) for 10 different extractions by ultrasonication and a Sample Analysis Unit (SAU) for fluorescent immunoassays. The SAU consists of five different flow cells, with an antibody microarray in each one (2000 spots). It is also equipped with an exclusive optical package and a charge-coupled device (CCD) for fluorescent detection. We demonstrated the performance of SOLID3 in the detection of a broad range of molecular-sized compounds, which range from peptides and proteins to whole cells and spores, with sensitivities at 1-2 ppb (ng mL⁻¹) for biomolecules and 10⁴ to 10³ spores per milliliter. We report its application in the detection of acidophilic microorganisms in the Río Tinto Mars analogue and report the absence of substantial negative effects on the immunoassay in the presence of 50 mM perchlorate (20 times higher than that found at the Phoenix landing site). Our SOLID instrument concept is an excellent option with which to detect biomolecules because it avoids the high-temperature treatments that may destroy organic matter in the presence of martian oxidants.
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Affiliation(s)
- Víctor Parro
- Centro de Astrobiología (INTA-CSIC), Madrid, Spain.
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98
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Osterrothová K, Jehlička J. Raman spectroscopic identification of phthalic and mellitic acids in mineral matrices. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2010; 77:1092-1098. [PMID: 20870453 DOI: 10.1016/j.saa.2010.08.081] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2010] [Revised: 08/24/2010] [Accepted: 08/27/2010] [Indexed: 05/29/2023]
Abstract
Raman spectroscopy has many advantages for planetary exploration, and the Raman technique is currently being developed for future space missions. The Raman microspectroscopic study of organic acids (phthalic and mellitic acids) in experimentally prepared mixtures with halite and gypsum was performed using near infrared 785 nm and visible 514 nm excitation wavelengths. Gypsum and halite matrices were chosen as analogues of Martian minerals. Carboxylic acids mixed with mineral powders were also investigated through a UV-transparent crystal of gypsum and halite (approximately 2 mm, resp. 5 mm thick), thereby creating a type of artificial inclusion that could potentially be present in Martian minerals. The detection limit of phthalic acid mixed in mineral matrices and analyzed through crystals was 1 wt% using both excitation wavelengths. A Raman mellitic acid signal was obtained at a concentration as low as 1 wt% in halite matrix, and at a concentration of 5 wt% when analyzed through halite crystal. In the case of mellitic acid mixed with gypsum and for analyses through a gypsum crystal, the detection limit is 5 wt% using both excitation wavelengths.
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Affiliation(s)
- Kateřina Osterrothová
- Institute of Geochemistry, Mineralogy and Mineral Resources, Faculty of Science, Charles University in Prague, Albertov 6, 128 43 Prague, Czech Republic.
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99
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Stockton AM, Tjin CC, Huang GL, Benhabib M, Chiesl TN, Mathies RA. Analysis of carbonaceous biomarkers with the Mars Organic Analyzer microchip capillary electrophoresis system: aldehydes and ketones. Electrophoresis 2010; 31:3642-9. [PMID: 20967779 DOI: 10.1002/elps.201000424] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2010] [Revised: 08/18/2010] [Accepted: 08/19/2010] [Indexed: 11/11/2022]
Abstract
A microchip CE method is developed for the analysis of two oxidized forms of carbon, aldehydes and ketones, with the Mars Organic Analyzer (MOA). Fluorescent derivitization is achieved in ∼ 15 min by hydrazone formation with Cascade Blue hydrazide in 30 mM borate pH 5-6. The microchip CE separation and analysis method is optimized via separation in 30 mM borate buffer, pH 9.5, at 20°C. A carbonyl standard consisting of ten aldehydes and ketones found in extraterrestrial matter is successfully separated; the resulting LOD depends on the reactivity of the compound and range from 70 pM for formaldehyde to 2 μM for benzophenone. To explore the utility of this method for analyzing complex samples, analyses of several fermented beverages are conducted, identifying ten aldehydes and ketones ranging from 30 nM to 5 mM. A Martian regolith simulant sample, consisting of a basalt matrix spiked with soluble ions and acetone, is designed and analyzed, but acetone is found to have a limited detectable lifetime under simulant Martian conditions. This work establishes the capability of the MOA for studying aldehydes and ketones, a critical class of oxidized organic molecules of interest in planetary and in terrestrial environmental and health studies.
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Affiliation(s)
- Amanda M Stockton
- Department of Chemistry, University of California, Berkeley, CA 94720, USA
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100
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Abstract
Organics are expected to exist on Mars based on meteorite infall, in situ production, and any possible biological sources. Yet they have not been detected on the martian surface; are they there, or are we not capable enough to detect them? The Viking gas chromatograph-mass spectrometer did not detect organics in the headspace of heated soil samples with a detection limit of parts per billion. This null result strongly influenced the interpretation of the reactivity seen in the Viking biology experiments and led to the conclusion that life was not present and, instead, that there was some chemical reactivity in the soil. The detection of perchlorates in the martian soil by instruments on the Phoenix lander and the reports of methane in the martian atmosphere suggest that it may be time to reconsider the question of organics. The high-temperature oxidizing properties of perchlorate will promote combustion of organics in pyrolytic experiments and may have affected the ability of both Phoenix's organic analysis experiment and the Viking mass spectrometer experiments to detect organics. So the question of organics on Mars remains open. A primary focus of the upcoming Mars Science Laboratory will be the detection and identification of organic molecules by means of thermal volatilization, followed by gas chromatography-mass spectrometry--as was done on Viking. However, to enhance organic detectability, some of the samples will be processed with liquid derivatization agents that will dissolve organics from the soil before pyrolysis, which may separate them from the soil perchlorates. Nonetheless, the problem of organics on Mars is not solved, and for future missions other organic detection techniques should therefore be considered as well.
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Affiliation(s)
- Inge L ten Kate
- NASA Goddard Space Flight Center, Greenbelt, Maryland 20771, USA.
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