Leaching of graphene oxide nanosheets in simulated soil and their influences on microbial communities

Mechanistic and future prospects in rhizospheric engineering for agricultural contaminants removal, soil health restoration, and management of climate change stress

Climate change, food insecurity, and agricultural pollution are all serious challenges in the twenty-first century, impacting plant growth, soil quality, and food security. Innovative techniques are required to mitigate these negative outcomes. Toxic heavy metals (THMs), organic pollutants (OPs), and emerging contaminants (ECs), as well as other biotic and abiotic stressors, can all affect nutrient availability, plant metabolic pathways, agricultural productivity, and soil-fertility. Comprehending the interactions between root exudates, microorganisms, and modified biochar can aid in the fight against environmental problems such as the accumulation of pollutants and the stressful effects of climate change. Microbes can inhibit THMs uptake, degrade organic pollutants, releases biomolecules that regulate crop development under drought, salinity, pathogenic attack and other stresses. However, these microbial abilities are primarily demonstrated in research facilities rather than in contaminated or stressed habitats. Despite not being a perfect solution, biochar can remove THMs, OPs, and ECs from contaminated areas and reduce the impact of climate change on plants. We hypothesized that combining microorganisms with biochar to address the problems of contaminated soil and climate change stress would be effective in the field. Despite the fact that root exudates have the potential to attract selected microorganisms and biochar, there has been little attention paid to these areas, considering that this work addresses a critical knowledge gap of rhizospheric engineering mediated root exudates to foster microbial and biochar adaptation. Reducing the detrimental impacts of THMs, OPs, ECs, as well as abiotic and biotic stress, requires identifying the best root-associated microbes and biochar adaptation mechanisms.

Transformation and Degradation of PAH Mixture in Contaminated Sites: Clarifying Their Interactions with Native Soil Organisms

Soil contamination of polycyclic aromatic hydrocarbons (PAHs), especially caused by the mixture of two or more PAHs, raised great environmental concerns. However, research on the migration and transformation processes of PAHs in soils and their interactions with native communities is limited. In this work, soil samples from uncontaminated sites around the industrial parks in Handan, Hengshui, and Shanghai were artificially supplemented with three concentrations of anthracene (Ant), 9-chloroanthracene (9-ClAnt), benzopyrene (BaP), and chrysene (Chr). Ryegrass was planted to investigate the degradation of PAHs and its interaction with native soil organisms in the constructed ryegrass-microbe-soil microcosmic system. The bacterial and fungal communities in soil were affected by PAHs; their species diversity and relative abundance changed after exposure to different concentrations of PAHs, among which Lysobacter, Bacillus, Pseudomonas, and Massilia bacteria were correlated to the degradation of PAHs. On the 56th day, the contents of BaP, Chr, and Ant decreased with the degradation process, while the degradation of 9-ClAnt was limited. Nineteen intermediates, including hydroxylation and carboxylated compounds, were identified. The present research would help clarify the potential interactions between PAHs and native organisms in contaminated sites, providing fundamental information for evaluating the transformation risks of PAHs in the natural environment.

Rice husk and its derived biochar assist phytoremediation of heavy metals and PAHs co-contaminated soils but differently affect bacterial community

In order to evaluate the feasibility of rice husk and rice husk biochar on assisting phytoremediation of polycyclic aromatic hydrocarbons (PAHs) and heavy metals (HMs) co-contaminated soils, a 150-day pot experiment planted with alfalfa was designed. Rice husk and its derived biochar were applied to remediate a PAHs, Zn, and Cr co-contaminated soil. The effects of rice husk and biochar on the removal and bioavailability of PAHs and HMs, PAH-ring hydroxylating dioxygenase gene abundance and bacterial community structure in rhizosphere soils were investigated. Results suggested that rice husk biochar had better performance on the removal of PAHs and immobilization of HMs than those of rice husk in co-contaminated rhizosphere soil. The abundance of PAH-degraders, which increased with the culture time, was positively correlated with PAHs removal. Rice husk biochar decreased the richness and diversity of bacterial community, enhanced the growth of Steroidobacter, Bacillus, and Sphingomonas in rhizosphere soils. However, Steroidobacter, Dongia and Acidibacter were stimulated in rice husk amended soils. According to the correlation analysis, Steroidobacter and Mycobacterium may play an important role in PAHs removal and HMs absorption. The combination of rice husk biochar and alfalfa would be a promising method to remediate PAHs and HMs co-contaminated soil.

Petroleum-contaminated soil bioremediation and microbial community succession induced by application of co-pyrolysis biochar amendment: An investigation of performances and mechanisms

This study aimed to remediate petroleum-contaminated soil using co-pyrolysis biochar derived from rice husk and cellulose. Rice husk and cellulose were mixed in various weight ratios (0:1, 1:0, 1:1, 1:3 and 3:1) and pyrolyzed under 500 °C. These biochar variants were labeled as R0C1, R1C0, R1C1, R1C3 and R3C1, respectively. Notably, the specific surface area and carbon content of the co- pyrolysis biochar increased, potentially promoting the growth and colonization of soil microorganisms. On the 60th day, the microbial control group achieved a 46.69% removal of pollutants, while the addition of R0C1, R1C0, R1C3, R1C1 and R3C1 resulted in removals of 70.56%, 67.01%, 67.62%, 68.74% and 67.30%, respectively. In contrast, the highest efficiency observed in the abiotic treatment group was only 24.12%. This suggested that the removal of petroleum pollutants was an outcome of the collaborative influence of co-pyrolysis biochar and soil microorganisms. Furthermore, the abundance of Proteobacteria, renowned for its petroleum degradation capability, obviously increased in the treatment group with the addition of co-pyrolysis biochar. This demonstrated that co-pyrolysis biochar could notably stimulate the growth of functionally associated microorganisms. This research confirmed the promising application of co-pyrolysis biochar in the remediation of petroleum-contaminated soil.

Biochars assisted phytoremediation of polycyclic aromatic hydrocarbons contaminated agricultural soil: Dynamic responses of functional genes and microbial community

A biochar-intensified phytoremediation experiment was designed to investigate the dynamic effects of different biochars on polycyclic aromatic hydrocarbon (PAH) removal in ryegrass rhizosphere contaminated soil. Maize and wheat straw biochar pyrolyzed at 300 °C and 500 °C were amended into PAH-contaminated soil, and then ryegrass (Lolium multiflorum L.) was planted for 90 days. Spearman's correlations among PAH removal, enzyme activity, abundance of PAH-ring hydroxylating dioxygenase (PAH-RHDα), and fungal and bacterial community structure were analyzed to elucidate the microbial degradation mechanisms during the combined remediation process. The results showed that 500 °C wheat straw biochar had higher surface area and more nutrients, and significantly accelerated the phytoremediation of PAHs (62.5 %), especially for high molecular weight PAH in contaminated soil. The activities of urease and dehydrogenase and the abundance of total and PAH-degrading bacteria, which improved with time by biochar and ryegrass, had a positive correlation with the removal rate of PAHs. Biochar enhanced the abundance of gram-negative (GN) PAH-RHDα genes. The GN PAH-degraders, Sphingomonas, bacteriap25, Haliangium, and Dongia may play vital roles in PAH degradation in biochar-amended rhizosphere soils. Principal coordinate analysis indicated that biochar led to significant differences in fungal community structures before 30 days, while the diversity of the bacterial community composition depended on planting ryegrass after 60 days. These findings imply that the structural reshaping of microbial communities results from incubation time and the selection of biochar and ryegrass in PAH-contaminated soils. Applying 500 °C wheat straw biochar could enhance the rhizoremediation of PAH-contaminated soil and benefit the soil microbial ecology.

Synergistic effects of adsorption and chemical reduction towards the effective Cr(VI) removal in the presence of the sulfur-doped biochar material

In this study, the anaerobic sludge withdrawn from thickener in a sewage treatment plant served as the precursor for sludge-based biochar fabrication, which was further modified via sulfur (S) heteroatom doping (i.e., S-BC). The S atom doping resulted in the adjustment of the physicochemical properties towards the carbon material, endowment of abundant functional groups on biochar surface, and increasing the binding sites between biochar and Cr(VI). Compared to the primary biochar (i.e., biochar without heteroatomic doping, named BC), S-BC exhibited a rough surface and possessed remarkable advantages in ash content, specific surface area, and pore volume. The existence of graphene carbon crystal structure for S-BC was confirmed through S-BC by XRD and FTIR analysis. The studies of adsorption kinetics and isotherms showed that pseudo-second-order kinetics and the Langmuir model more fitted the Cr(VI) removal behavior in the presence of S-BC. Therefore, the chemisorption and monolayer adsorption were the primary mechanisms involved in the Cr(VI) removal process. Additionally, XPS analysis results illustrated the aqueous Cr(VI) was efficiently eliminated through the synergistic effect of chemisorption and reduction to Cr(III) in the presence of S-BC. Moreover, S-BC could still achieve the Cr(VI) eliminating efficiency of 85.31% undergoing five cycles with unchanged functional group and crystal structure via FTIR and XRD analysis. Thus, the results of this study may shed light on a new approach for simultaneous economical sludge disposal and the sustainable remediation of the Cr(VI)-contaminated wastewater.

Pyrolyzed sediment accelerates electron transfer and regulates rhodamine B biodegradation

Electron transfer efficiency is a key factor that determined the removal of environmental pollution through biodegradation. Electron shuttles exogenously addition is one of the measures to improve the electron transfer efficiency. In this study, the sediment was pyrolyzed at different temperature to investigate its properties of mediating electron transfer and removing of rhodamine B (RhB) in microbial electrochemical systems (MESs). Sediments pyrolyzed at 300 °C (PS300) and 600 °C (PS600) have promoted electron transfer which led to 16 % enhancement of power generation while the result is reversed at 900 °C (PS900). Although power output of PS300 and PS600 are similar, the removal efficiency of RhB is not consistent, which may be caused by the biofilm structure difference. Microbial community analysis revealed that the abundance of EAB and toxicity-degrading bacteria (TDB) in PS600 was 6 % higher than that in PS300. The differentiation of microbial community also affected the metabolic pathway, the amino synthesis and tricarboxylic acid cycle were primarily upregulated with PS600 addition, which enhanced the intracellular metabolism. However, a more active cellular anabolism occurred with PS300, which may have been triggered by RhB toxicity. This study showed that pyrolytic sediment exhibits an excellent ability to mediate electron transport and promote pollutant removal at 600 °C, which provides a techno-economically feasible scenario for the utilization of low-carbon-containing solid wastes.

The influences of graphene oxide and nitrification inhibitor on vegetable growths and soil and endophytic bacterial communities: Double-edge sword effects and nitrate risk controls

Crop yield and quality are substantial indicators of evaluating agricultural nitrogen management practices, and the nitrate (NO3--N) is one of the predominant factors affecting crop quality. The NO3--N accumulation in vegetable crop affects plant growth and quality and human health. Therefore, it is necessary to stimulate vegetable yield but eliminate excessive NO3--N in soils and plants with feasible management strategies. Graphene oxide (GO) is a novel carbon nanomaterial that has attracted great attention, but rare research has been conducted to quantify the effects of GO on plant NO3--N accumulation and microbial communities. This study explored effects of the GO and nitrification inhibitors, dicyandiamide (DCD) and 3, 4-dimethylpyrazole phosphate (DMPP), on vegetable yields and NO3--N contents and bacterial communities in soil-cabbage (Brassica rapa subsp. Chinensis) system. The soil NO3--N content was significantly reduced with the single GO application. The cabbage NO3--N content was increased by 60.4 % while the cabbage yield was significantly enhanced by 101.9 % with the single GO application. Meanwhile, the Invsimpson index of soil bacterial community and the ACE and Chao1 richness estimators of endophytic bacterial community were significantly decreased by the GO application. Cabbage NO3--N content was significantly and negatively correlated with the soil Myxococcota, endophytic bacterial community co-occurrence network edge, cabbage soluble sugar and cabbage proline. The GO application generated double-edged sword effects of positively promoting yield but causing risks of NO3--N accumulation and quality deterioration. However, these adverse effects could be mitigated by the extra nitrification inhibitor application. The potential ecological risks of GO application to the vegetable quality and endophytic community should be considered.

Predicting soil concentrations and remediation target values of BTEX by an off-gas based mass transfer model

Soil vapor extraction (SVE) is a widely used technology for the remediation of volatile organic compounds (VOCs) contaminated soils. Residual concentrations of VOCs are crucial for assessing the SVE process and planning when to stop this process, however, the measurement of their residual concentrations in the soil is complicated. Herein, a pseudo-first-order sequential reaction model was established to predict the mass transfer of the BTEX (benzene, toluene, ethylbenzene, xylene) between the soil and off-gas during the SVE process. Based on this mass transfer model, the residual concentrations of BTEX in the soil during the trailing stage could be accurately estimated (R2 > 0.89) by their off-gas concentrations that were directly monitored in real time. Considering the removal efficiency and operating costs, a concept of the remediation target values (RTV) was proposed for the SVE technology, and its relevant model (R2 > 0.92, NRMSE = 6.4-16.8 %) was established based on the experimental data. The remediation endpoint can be further estimated based on the RTV with an overall accuracy of 84-100 %. These findings provide a simple and fast way to predict VOC concentrations in soil with easy-to-know factors and online monitoring of off-gas concentrations and will guide and optimize the SVE process toward more economical and efficient techniques for soil remediation.

Assessing microbial degradation potential of methylmercury in different types of paddy soil through short-term incubation

The neurotoxic methylmercury (MeHg) in paddy soils can accumulate in rice grains. Microbial demethylation is an important pathway of MeHg degradation in soil, but the effect of soil type on microbial degradation of MeHg remains unclear. Therefore, we investigated MeHg degradation in eight typical paddy soils and analyzed the associations between soil physiochemical properties and microbial degradation efficiencies of MeHg. Results showed that MeHg was significantly degraded in unsterilized paddy soils, and the microbial degradation efficiency ranged from 10.8% to 64.6% after a 30-day incubation. The high microbial degradation efficiency of MeHg was observed in the soils with high levels of clay content, whereas relatively low degradation efficiency was found in the red paddy soils. We identified that Paenibacillaceae was the most important microbial predictor of MeHg degradation and was positively correlated with the degradation efficiency in the soils. The abundances of these microbial taxa associated with MeHg degradation were positively correlated with clay content. In addition, Eh, pH, and SOC could influence microbial degradation of MeHg by regulating certain microbial communities. Our results indicate that soil type is crucial in driving MeHg degradation, which has important implications for the mitigation of MeHg pollution in various croplands.

Graphene oxide affects the symbiosis of legume-rhizobium and associated rhizosphere rhizobial communities

The large-scale production and utilization of graphene oxide (GO) have raised concerns regarding its environmental exposure and potential risks. However, existing research on GO toxicity has primarily focused on individual organisms. Little attention has been given to the interaction between GO and the nitrogen-fixing symbiosis of legume-rhizobium. In this study, we focused on alfalfa (Medicago sativa L.), a typical leguminous nitrogen-fixing plant, to investigate the effects of GO on various aspects of this symbiotic relationship, including root nodulation, rhizobial viability, nodule nitrogen fixation, DNA damage, and the composition of the rhizobial community in the rhizosphere. As the dosage of GO increased, a significant inhibition in nodulation development was observed. Exposure to GO resulted in decreased growth and viability of rhizobia, as well as induced DNA damage in nodule cells. Furthermore, with increasing GO dosage, there were significant reductions in nitrogenase activity, leghemoglobin level, and cytoplasmic ammonia content within the root nodules. Additionally, the presence of GO led to notable changes in the rhizobial community in the rhizosphere. Our findings support the existence of the damage promoted by GO in the symbiosis of nitrogen fixing rhizobia with legumes. This underscores the importance of careful soil GO management.

Environmental biotechnology and the involving biological process using graphene-based biocompatible material

Biotechnology is a promising approach to environmental remediation but requires improvement in efficiency and convenience. The improvement of biotechnology has been illustrated with the help of biocompatible materials as biocarrier for environmental remediations. Recently, graphene-based materials (GBMs) have become promising materials in environmental biotechnology. To better illustrate the principle and mechanisms of GBM application in biotechnology, the comprehension of the biological response of microorganisms and enzymes when facing the GBMs is needed. The review illustrated distinct GBM-microbe/enzyme composites by providing the GBM-microbe/enzyme interaction and the determining factors. There are diverse GBM modifications for distinct biotechnology applications. Each of these methods and applications depends on the physicochemical properties of GBMs. The applications of these composites were mainly categorized as pollutant adsorption, anaerobic digestion, microbial fuel cells, and organics degradation. Where information was available, the strategies and mechanisms of GBMs in improving application efficacies were also demonstrated. In addition, the biological response, from microbial community changes, extracellular polymeric substances changes to biological pathway alteration, may become important in the application of these composites. Furthermore, we also discuss challenges facing the environmental application of GBMs, considering their fate and toxicity in the ecosystem, and offer potential solutions. This research significantly enhances our comprehension of the fundamental principles, underlying mechanisms, and biological pathways for the in-situ utilization of GBMs.

Immobilization of Bacillus Thuringiensis and applicability in removal of sulfamethazine from soil

Microbial degradation is considered an essential and promising treatment for sulfadimidine contamination of soil. To address the low colonization rates and inefficiencies of typical antibiotic-degrading bacteria, sulfamethazine (SM2)-degrading strain H38 is converted into immobilized bacteria in this study. Results show that the removal rate of SM2 by immobilized strain H38 reaches 98% at 36 h, whereas the removal rate of SM2 by free bacteria reaches 75.2% at 60 h. In addition, the immobilized bacteria H38 exhibits tolerance to a wide range of pH (5-9) and temperature (20 °C-40 °C). As the amount of inoculation increases and the initial concentration of SM2 decreases, the removal rate of SM2 by the immobilized strain H38 increases gradually. Laboratory soil remediation tests show that the immobilized strain H38 can remove 90.0% of SM2 from the soil on the 12th day, which exceeds the removal by free bacteria by 23.9% in the same period. Additionally, the results show that the immobilized strain H38 enhances the overall activity of microorganisms in SM2-contaminated soil. Compared with the SM2 only (control group containing no bacteria) and free bacterial treatment groups, the gene expression levels of ammonia-oxidizing archaea, ammonia-oxidizing bacteria, cbbLG, and cbbM increased significantly in the treatment group with immobilized strain H38. This study shows that immobilized strain H38 can reduce the effect of SM2 on soil ecology to a greater extent than free bacteria, while providing safe and effective remediation.

A novel application of thallium isotopes in tracing metal(loid)s migration and related sources in contaminated paddy soils

Thallium (Tl) is a highly toxic heavy metal, which is harmful to plants and animals even in trace amounts. Migration behaviors of Tl in paddy soils system remain largely unknown. Herein, Tl isotopic compositions have been employed for the first time to explore Tl transfer and pathway in paddy soil system. The results showed considerably large Tl isotopic variations (ε²⁰⁵Tl = -0.99 ± 0.45 ~ 24.57 ± 0.27), which may result from interconversion between Tl(I) and Tl(III) under alternative redox conditions in the paddy system. Overall higher ε²⁰⁵Tl values of paddy soils in the deeper layers were probably attributed to abundant presence of Fe/Mn (hydr)oxides and occasionally extreme redox conditions during alternative dry-wet process which oxidized Tl(I) to Tl(III). A ternary mixing model using Tl isotopic compositions further disclosed that industrial waste contributed predominantly to Tl contamination in the studied soil, with an average contribution rate of 73.23%. All these findings indicate that Tl isotopes can be used as an efficient tracer for fingerprinting Tl pathway in complicated scenarios even under varied redox conditions, providing significant prospect in diverse environmental applications.

Graphene oxide affects bacteriophage infection of bacteria by promoting the formation of biofilms

Graphene oxide (GO) is increasingly used in a range of fields, such as electronics, biosensors, drug delivery, and water treatment, and the likelihood of its release into the environment is increasing correspondingly. GO is involved in the formation of biofilms and leads bacteria to over proliferate, but the effects of GO on bacteriophage infection remain unexplored. We noted bacterial overgrowth in experiments when GO was used to treat the bacterial culture medium, leading us to question whether bacterial proliferation caused by GO affects phage infection of target bacteria. Treating Pseudomonas aeruginosa with GO at a low dosage (0.02 mg/mL) led to biofilm expansion in LB medium. Biofilm formation in the presence of GO affected the ability of bacteriophages to kill bacteria and reproduce. Similarly, the presence of GO deposits increased the ratio of bacteria to phage, providing a favorable environment for bacterial growth. Additionally, increasing the positive electrical charge in the culture environment inhibited the rejection of bacteriophages by negatively charged GO, improving phage reproduction. Finally, adding GO to sewage in imitation field experiments significantly increased the bacterial diversity and richness in the sewage, stimulating a significant increase in the variety and number of bacteria. Collectively, these results indicate that GO hinders phage infection by providing a bacterial refuge. The results of this study provide valuable insights into how GO interacts with bacteriophages to explore the effects on bacterial growth.

Anaerobic selenite-reducing bacteria and their metabolic potentials in Se-rich sediment revealed by the combination of DNA-stable isotope probing, metagenomic binning, and metatranscriptomics

Microorganisms play a critical role in the biogeochemical cycling of selenium (Se) in aquatic environments, particularly in reducing the toxicity and bioavailability of selenite (Se(IV)). This study aimed to identify putative Se(IV)-reducing bacteria (Se^IVRB) and investigate the genetic mechanisms underlying Se(IV) reduction in anoxic Se-rich sediment. Initial microcosm incubation confirmed that Se(IV) reduction was driven by heterotrophic microorganisms. DNA stable-isotope probing (DNA-SIP) analysis identified Pseudomonas, Geobacter, Comamonas, and Anaeromyxobacter as putative Se^IVRB. High-quality metagenome-assembled genomes (MAGs) affiliated with these four putative Se^IVRB were retrieved. Annotation of functional gene indicated that these MAGs contained putative Se(IV)-reducing genes such as DMSO reductase family, fumarate and sulfite reductases. Metatranscriptomic analysis of active Se(IV)-reducing cultures revealed significantly higher transcriptional levels of genes associated with DMSO reductase (serA/PHGDH), fumarate reductase (sdhCD/frdCD), and sulfite reductase (cysDIH) compared to those in cultures not amended with Se(IV), suggesting that these genes played important roles in Se(IV) reduction. The current study expands our knowledge of the genetic mechanisms involved in less-understood anaerobic Se(IV) bio-reduction. Additinally, the complementary abilities of DNA-SIP, metagenomics, and metatranscriptomics analyses are demonstrated in elucidating the microbial mechanisms of biogeochemical processes in anoxic sediment.

Understanding the role of graphene oxide in affecting PAHs biodegradation by microorganisms: An integrated analysis using 16SrRNA, metatranscriptomic, and metabolomic approaches

Graphene oxide (GO)-promoted microbial degradation technology is considered an important strategy to eliminate polycyclic aromatic hydrocarbons (PAHs) in the environment; however, the mechanism by which GO affects microbial degradation of PAHs has not been fully studied. Thus, this study aimed to analyze the effect of GO-microbial interaction on PAHs degradation at the microbial community structure, community gene expression, and metabolic levels using multi-omics combined technology. We treated PAHs-contaminated soil samples with different concentrations of GO and analyzed the soil samples for microbial diversity after 14 and 28 days. After a short exposure, GO reduced the diversity of soil microbial community but increased potential degrading microbial abundance, promoting PAHs biodegradation. This promotion effect was further influenced by the GO concentration. In a short period of time, GO upregulated the expression of genes involved in microbial movement (flagellar assembly), bacterial chemotaxis, two-component system, and phosphotransferase system in the soil microbial community and increased the probability of microbial contact with PAHs. Biosynthesis of amino acids and carbon metabolism of microorganisms were accelerated, thereby increasing the degradation of PAHs. With the extension of time, the degradation of PAHs stagnated, which may be due to the weakened stimulation of GO on microorganisms. The results showed that screening specific degrading microorganisms, increasing the contact area between microorganisms and PAHs, and prolonging the stimulation of GO on microorganisms were important means to improve the biodegradation efficiency of PAHs in soil. This study elucidates how GO affects microbial PAHs degradation and provides important insights for the application of GO-assisted microbial degradation technology.

Pristine and Sulfidized Zinc Oxide Nanoparticles Promote the Release and Decomposition of Organic Carbon in the Legume Rhizosphere

The effects and mechanisms of zinc oxide nanoparticles (ZnO NPs) and their aging products, sulfidized (s-) ZnO NPs, on the carbon cycling in the legume rhizosphere are still unclear. We observed that, after 30 days of cultivation, in the rhizosphere soil of Medicago truncatula, under ZnO NP and s-ZnO NP treatments, the dissolved organic carbon (DOC) concentrations were significantly increased by 1.8- to 2.4-fold compared to Zn²⁺ treatments, although the soil organic matter (SOM) contents did not change significantly. Compared to Zn²⁺ additions, the additions of NPs significantly induced the production of root metabolites such as carboxylic acids and amino acids and also stimulated the growth of microbes involved in the degradations of plant-derived and recalcitrant SOM, such as bacteria genera RB41 and Bryobacter, and fungi genus Conocybe. The bacterial co-occurrence networks indicated that microbes associated with SOM formation and decomposition were significantly increased under NP treatments. The adsorption of NPs by roots, the generation of root metabolites (e.g., carboxylic acid and amino acid), and enrichment of key taxa (e.g., RB41 and Gaiella) were the major mechanisms by which ZnO NPs and s-ZnO NPs drove DOC release and SOM decomposition in the rhizosphere. These results provide new perspectives on the effect of ZnO NPs on agroecosystem functions in soil-plant systems.

Plastispheres as hotspots of microbially-driven methylmercury production in paddy soils

Microplastics (MPs) as emerging contaminants have accumulated extensively in agricultural ecosystems and are known to exert important effects on biogeochemical processes. However, how MPs in paddy soils influence the conversion of mercury (Hg) to neurotoxic methylmercury (MeHg) remains poorly understood. Here, we evaluated the effects of MPs on Hg methylation and associated microbial communities in microcosms using two typical paddy soils in China (i.e., yellow and red soils). Results showed that the addition of MPs significantly increased MeHg production in both soils, which could be related to higher Hg methylation potential in the plastisphere than in the bulk soil. We found significant divergences in the community composition of Hg methylators between the plastisphere and the bulk soil. In addition, the plastisphere had higher proportions of Geobacterales in the yellow soil and Methanomicrobia in the red soil compared with the bulk soil, respectively; and plastisphere also had more densely connected microbial groups between non-Hg methylators and Hg methylators. These microbiota in the plastisphere are different from those in the bulk soil, which could partially account for their distinct MeHg production ability. Our findings suggest plastisphere as a unique biotope for MeHg production and provide new insights into the environment risks of MP accumulation in agricultural soils.

Exogenous Electroactive Microbes Regulate Soil Geochemical Properties and Microbial Communities by Enhancing the Reduction and Transformation of Fe(III) Minerals

Electroactive microbes can conduct extracellular electron transfer and have the potential to be applied as a bioresource to regulate soil geochemical properties and microbial communities. In this study, we incubated Fe-limited and Fe-enriched farmland soil together with electroactive microbes for 30 days; both soils were incubated with electroactive microbes and a common iron mineral, ferrihydrite. Our results indicated that the exogenous electroactive microbes decreased soil pH, total organic carbon (TOC), and total nitrogen (TN) but increased soil conductivity and promoted Fe(III) reduction. The addition of electroactive microbes also changed the soil microbial community from Firmicutes-dominated to Proteobacteria-dominated. Moreover, the total number of detected microbial species in the soil decreased from over 700 to less than 500. Importantly, the coexistence of N-transforming bacteria, Fe(III)-reducing bacteria and methanogens was also observed with the addition of electroactive microbes in Fe-rich soil, indicating the accelerated interspecies electron transfer of functional microflora.

Synergistic effects of rice husk biochar and aerobic composting for heavy oil-contaminated soil remediation and microbial community succession evaluation

Soil petroleum pollution is an urgent problem in modern society, which seriously threatens the ecological balance and environmental safety. Aerobic composting technology is considered economically acceptable and technologically feasible for the soil remediation. In this study, the combined experiment of aerobic composting with the addition of biochar materials was conducted for the remediation of heavy oil-contaminated soil, and treatments with 0, 5, 10 and 15 wt% biochar dosages were labeled as CK, C5, C10 and C15, respectively. Conventional parameters (temperature, pH, NH₄⁺-N and NO₃^--N) and enzyme activities (urease, cellulase, dehydrogenase and polyphenol oxidase) during the composting process were systematically investigated. Remediation performance and functional microbial community abundance were also characterized. According to experimental consequences, removal efficiencies of CK, C5, C10 and C15 were 48.0%, 68.1%, 72.0% and 73.9%, respectively. The comparison with abiotic treatments corroborated that biostimulation rather than adsorption effect was the main removal mechanism during the biochar-assisted composting process. Noteworthy, the biochar addition regulated the succession process of microbial community and increased the abundance of microorganisms related to petroleum degradation at the genus level. This work demonstrated that aerobic composting with biochar amendment would be a fascinating technology for petroleum-contaminated soil remediation.

Enhanced carbon emission driven by the interaction between functional microbial community and hydrocarbons: An enlightenment for carbon cycle

Soil microbial communities are usually regarded as one of the key players in the global element cycling. Moreover, an important consequence of oil contamination altering the structure of microbial communities is likely to result in an increased carbon emission. However, understanding of the complex interactions between environmental factors and biological communities is clearly lagging behind. Here it showed that the flux of carbon emissions increased in oil-contaminated soils, up to 13.64 g C·(kg soil)^-1·h^-1. This phenomenon was mainly driven by the enrichment of rare degrading microorganisms (e.g., Methylosinus, Marinobacter, Pseudomonas, Alcanivorax, Yeosuana, Halomonas and Microbulbifer) in the aerobic layer, rather than the anaerobic layer, which is more conducive to methane formation. In addition, petroleum hydrocarbons and environmental factors are equally important in shaping the structure of microbial communities (the ecological stability) and functional traits (e.g., fatty acid metabolism, lipid metabolism and amino acid metabolism) due to the different ecological sensitivities of microorganisms. Thus, it can be believed that the variability of rare hydrocarbon degrading microorganisms is of greater concern than changes in dominant microorganisms in oil-contaminated soil. Undoubtedly, this study could reveal the unique characterization of bacterial communities that mediate carbon emission and provide evidence for understanding the conversion from carbon stores to carbon gas release in oil-contaminated soils.

Ryegrass extraction of heavy metals from municipal sewage sludge compost-amended soils assisted with citric acid

Land use is an effective way to reduce carbon emission in the recycling process of municipal sludge compost; meanwhile, heavy metals (HMs) in the sludge can be phytoextracted by ornamental plants. As an eco-friendly soil amendment, citric acid (CA) has been reported to be of great potential aid to phytoremediation, and its effect on ryegrass (Lolium perenne L.) extraction of HMs (Zn, Ni, Pb, Cu, and Cd) from municipal sewage sludge compost-amended (MSSC) soils has been investigated through pot experiments in the study. The growth of ryegrass was significantly promoted under 2 and 4 mmol kg^-1 CA treatments. The concentrations of HMs in MSSC soil after 45-day planting were significantly reduced ([Formula: see text]), and they were further reduced except for Cu while CA treated. The acid-extractable fraction of HMs in the soil was increased significantly as CA treated, and further improvement could be found when CA dose increased, which was due to the decreased soil pH and the complexation of CA with metal ions. The phytoremediation factor (PRF) was proposed to assess the phytoremediation efficiency, which was obtained as a ratio of the product of the biomass and metal concentration of plant shoot between the CA-treated group and the control group. When the CA dose was 6 mmol kg^-1, the average PRF of five heavy metals reached 2.29, and Cd was the highest (3.72), demonstrating that CA had great promotion on phytoremediation of heavy metals. This study made a contribution to the research of phytoremediation in sludge land use by demonstrating ryegrass as an ideal bioaccumulator for heavy metals, especially for Cd.

Carbon Fibers for Bioelectrochemical: Precursors, Bioelectrochemical System, and Biosensors

Abstract

Carbon fibers (CFs) demonstrate a range of excellent properties including (but not limited to) microscale diameter, high hardness, high strength, light weight, high chemical resistance, and high temperature resistance. Therefore, it is necessary to summarize the application market of CFs. CFs with good physical and chemical properties stand out among many materials. It is believed that highly fibrotic CFs will play a crucial role. This review first introduces the precursors of CFs, such as polyacrylonitrile, bitumen, and lignin. Then this review introduces CFs used in BESs, such as electrode materials and modification strategies of MFC, MEC, MDC, and other cells in a large space. Then, CFs in biosensors including enzyme sensor, DNA sensor, immune sensor and implantable sensor are summarized. Finally, we discuss briefly the challenges and research directions of CFs application in BESs, biosensors and more fields.

Highlights

CF is a new-generation reinforced fiber with high hardness and strength.Summary precursors from different sources of CFs and their preparation processes.Introduction of the application and modification methods of CFs in BESs and biosensor.Suggest the challenges in the application of CFs in the field of bio-electrochemistry.Propose the prospective research directions for CFs.

Graphical abstract

Biochar aerogel enhanced remediation performances for heavy oil-contaminated soil through biostimulation strategy

Petroleum leakages can seriously damage the soil environment and cause a persistent harm to human health, due to the release of heavy oil pollutants with a high viscosity and high molecular weight. In this paper, biochar aerogel materials were successfully prepared under 600, 700 and 800 ℃ (accordingly labeled as 600-aerogel, 700-aerogel and 800-aerogel) with green, sustainable and abundant sisal leaves as raw materials for the remediation of heavy oil-contaminated soil. The remediation performances of biochar aerogel supplement for heavy oil-contaminated soil were investigated, while microbial abundance and community structure were characterized. The degradation efficiency of 600-aerogel, 700-aerogel and 800-aerogel treatments was accordingly 80.69%, 86.04% and 86.62% after 60 days. Apart from adsorption behavior, biostimulation strengthened the degradation efficiency, according to findings from first-order degradation kinetics. Biochar aerogel supplement basically increased genera microbial abundance for Sinomonas, Streptomyces, Sphingomonas and Massilia with petroleum degradation abilities through microorganisms' biostimulation. Sinomonas as the dominant genus with the highest abundance probably contributed much higher capacities to heavy oil degradation. This study can provide an inspiring reference for the development of green carbon-based materials to be applied in heavy oil-contaminated soils through biostimulation mechanisms.

Performance of graphene and traditional soil improvers in limiting nutrients and heavy metals leaching from a sandy Calcisol

Given the large amount of Graphene produced in the last years, there is the need to introduce this new material into a green and circular economy loop. In this study, for the first time, the fate of nutrients and heavy metals in a sandy Calcisol amended with Graphene was monitored and compared to other traditional improvers such as Compost, Zeolites, and Biochar. This was performed via saturated and unsaturated columns' experiments with two different fertilization regimes: one with NPK fertilizer and one with an innovative fertigation water (FW) produced from a pilot wastewater treatment plant. The breakthrough curves of each nutrient and heavy metal were analysed to understand the main processes occurring in saturated and unsaturated conditions, comparing the columns amended with the improvers versus the unamended Controls. Mass balances for each nutrient and heavy metal were developed to infer whether the different soil improvers were effective in minimizing leaching. Graphene, for most cases, behaved as the Control in nutrients' leaching for all the saturated and unsaturated experiments, both with NPK and FW. Biochar increased EC, K⁺, and pH of the leaching water, which could be an issue for the growth of some plants. Compost increased NO₃^- leaching in all the experiments. Zeolites showed the best N compounds retention, but great PO₄^3- leaching in saturated conditions. Heavy metals leachates were analysed only for unsaturated columns (as more representative of field conditions) and found at concentrations well below the limits suggested by the U.S. Environmental Protection Agency. Overall, Graphene performed well in minimizing nutrients and heavy metals leaching, respect to classical improvers. This study is a starting point for field studies that will be critical to have a clear understanding of how Graphene behaves in the environment.

Experimental evaluation of the influence of combined particle size pretreatment and Fe3O4 additive on fuel yields of Arachis Hypogea shells

A smart energy recovery process can achieve maximum energy recovery from organic wastes. Pretreatment of feedstock is essential to biogas and methane yields during the anaerobic digestion process. This work combined particle size reduction with Fe₃O₄ nanoparticles to investigate their influence on biogas and methane yields from anaerobic digestion of Arachis hypogea shells. Twenty milligrams per litre of Fe₃O₄ nanoparticles was implemented with 2, 4, 6 and 8 mm particle sizes and a single treatment of Fe₃O₄ for 35 days. The treatments were compared with each other and were discovered to significantly (p < 0.05) enhance biogas yield by 37.40%, 50.10%, 54.40%, 51.40% and 35.50% compared with control, respectively. Specific biogas yield recorded was 966.2, 1406, 1552.7, 1317.4, 766.2 and 413 mL g^-1 volatile solid. This study showed the combination of Fe₃O₄ with 6 mm particle size of Arachis hypogea shells produced the optimum biogas and methane yields. The addition of Fe3O4 to particle sizes below 6 mm resulted in over-accumulation of volatile fatty acids and lowered the gas yield. This can be applied on an industrial scale.

Stabilization mechanism of Pb with an amino- and mercapto-polymer to assist phytoremediation

An important concern during phytoremediation of heavy metal contamination in soils is the risk of leaching of heavy metals before they can be taken up by plants. The most effective method is to use heavy metal stabilizers. However, the stabilization without selectivity will greatly inhibit the phytoremediation effect of all heavy metals. A novel polymer with amino and mercapto groups named as AMP has been prepared as a new exclusive soil stabilizer for Pb. The adsorption of AMP toward Pb belonged to a monolayer adsorption and chemical process. The adsorption capacity of Pb increased with the increase of pH and initial Pb concentration, and obeyed the Langmuir model and pseudo-second-order model, respectively. An amazing maximum adsorption capacity of 588 mg Pb g^-1 was reached for AMP when initial concentration was 300 mg Pb L^-1, while K₂ of 0.594 g mg^-1 min^-1 was obtained when the initial Pb concentration was 2.0 mg L^-1. The distribution coefficient of AMP to Pb in the mixture of five heavy metals was as high as 3110 mL g^-1, which was at least 7-fold greater than those of other heavy metals, exhibiting high selective to Pb. AMP showed a fast, large adsorption capacity and good selectivity due to the abundance of sulfhydryl and amino functional groups in the polymer and their interaction with metal ions. The effects of AMP in soil remediation were further tested by a soil column leaching experiment and a pot experiment, and the good stabilization effect of AMP on Pb and the less effect on bioavailability of other heavy metals at recommended doses were verified. This study was expected to solve the problem of leaching risk of the target metal such as Pb in sludge during land use. It provided a new idea of exclusive stabilization to assist phytoremediation of non-target heavy metals by reducing the leaching risk of some special target metal.

Physiological and morphological responses of Chlorella pyrenoidosa to different exposure methods of graphene oxide quantum dots

Graphene oxide quantum dots (GOQDs) can convert the ultraviolet (200- 380 nm) into available wavelength (400- 700 nm) for microalgae cultivation. However, it has not been applied in large-scale microalgae culture due to its high cost and difficulties in recovery. This study proposed a new strategy for the sustainable use of GOQDs, namely, GOQDs solution was added to the outer sandwich of the reactor. Herein, the effects of direct and indirect exposure of different GOQDs concentrations (0, 100, and 1000 mg/L) on the microalgae culture were compared. When microalgae were directly exposed to the GOQDs, 100 mg/L of GOQDs increased the biomass production of microalgae by 24.0 %, while 1000 mg/L of GOQDs decreased biomass production by 31 %. High concentration of GOQDs (direct exposure) could cause extra oxidative stress in the microalgae cells and result in a significant reduction of pigment content. When microalgae were indirectly exposed to the GOQDs, the increased concentration of GOQDs enhanced the growth of microalgae. Compared to the blank group, 1000 mg/L of GOQDs increased the microalgae biomass production and bioenergy by 14.1 % and 40.17 %, respectively. The indirect exposure of GOQDs can effectively avoid photo-oxidation and organelle damage to the microalgae cells. Overall, the indirect exposure of GOQDs is a sustainable way for effectively promoting microalgae growth and reducing the application cost.

Recent advances and trends of trichloroethylene biodegradation: A critical review

Trichloroethylene (TCE) is a ubiquitous chlorinated aliphatic hydrocarbon (CAH) in the environment, which is a Group 1 carcinogen with negative impacts on human health and ecosystems. Based on a series of recent advances, the environmental behavior and biodegradation process on TCE biodegradation need to be reviewed systematically. Four main biodegradation processes leading to TCE biodegradation by isolated bacteria and mixed cultures are anaerobic reductive dechlorination, anaerobic cometabolic reductive dichlorination, aerobic co-metabolism, and aerobic direct oxidation. More attention has been paid to the aerobic co-metabolism of TCE. Laboratory and field studies have demonstrated that bacterial isolates or mixed cultures containing Dehalococcoides or Dehalogenimonas can catalyze reductive dechlorination of TCE to ethene. The mechanisms, pathways, and enzymes of TCE biodegradation were reviewed, and the factors affecting the biodegradation process were discussed. Besides, the research progress on material-mediated enhanced biodegradation technologies of TCE through the combination of zero-valent iron (ZVI) or biochar with microorganisms was introduced. Furthermore, we reviewed the current research on TCE biodegradation in field applications, and finally provided the development prospects of TCE biodegradation based on the existing challenges. We hope that this review will provide guidance and specific recommendations for future studies on CAHs biodegradation in laboratory and field applications.

The nitrate uptake and growth of wheat were more inhibited under single-layer graphene oxide stress compared to multi-layer graphene oxide

Although the phytotoxicity of graphene-based materials has been investigated extensively, the effects of different graphene-based materials on nutrient uptake in plants remain unclear. Here, we analyzed the differences in phytotoxicity between single-layer graphene oxide (sGO) and multi-layer graphene oxide (mGO) by analyzing the growth status and nitrate (NO₃^-) accumulation in wheat plants at 0, 100, 200, 400, and 800 mg L^-1 graphene oxide supply. Both sGO and mGO displayed concentration-dependent inhibitory effects on biomass, root length, number of lateral roots, and nitrogen (N) nutrient status. Treatment with 400 mg L^-1 sGO caused 0.9-, 1.3-, and 1-fold higher reductions in NO₃^--N, assimilated N, and total N concentrations in roots, respectively, than mGO treatment. Analysis of root oxidative stress and in situ NO₃^- uptake revealed that sGO caused more significant damage to the root tip and a lower NO₃^- net influx rate than mGO. In addition, the expression of NO₃^- transporter (NRT) genes in roots, including NRT1.5, NRT2.1, NRT2.2, NRT2.3, and NRT2.4, under sGO treatment were lower than those under mGO treatment. Overall, sGO treatment induced a more severe inhibitory effect on root growth and NO₃^- uptake and accumulation than mGO treatment, accompanied by significant suppression of the expression of NRTs in sGO-treated roots. This study provides a physiological and molecular basis for studying the phytotoxic effects of various sizes of graphene oxide.

Graphene oxide decreases the abundance of nitrogen cycling microbes and slows nitrogen transformation in soils

Graphene oxide (GO) has been widely used in many applications due to its excellent properties. Given the extensive production and use of this nanomaterial, its release into the environment is inevitable. However, little is known about the effects of GO on microbial nitrogen transformation and the related processes after GO enters the soil environment. The present study showed that GO significantly reduced soil microbial biomass and caused a decline in microbial diversity after the soils were subjected to various GO concentrations (10, 100, and 1000 mg kg^-1) for 4 months. Among them, the abundances of nitrogen transformation related bacteria such as Firmicutes, Nitrospirota, Proteobacteria, Planctomycetota, and Cyanobacteria were significantly decreased with GO incubation. Among the enzymes that are related to nitrogen transformation, nitrate reductase was the most sensitive even at low concentrations of GO, followed by ammonia monooxygenase and urease, which were reduced by 13-31%, 5-26%, and 9-19% respectively, than those of the control. We found that high concentrations of GO significantly increased the retention of soil urea by 32-59%, and the contents of ammonium and nitrate were 22-28% and 55-69% lower compared to those of the control, respectively. Moreover, the response of most of the indicators in the above process to multilayer GO was more significant than that to single layer GO. Overall, this study provides new insights into the comprehensive understanding of GO's impacts on the soil nitrogen cycle.

Deciphering the fate of antibiotic resistance genes in norfloxacin wastewater treated by a bio-electro-Fenton system

The misuse of antibiotics has increased the prevalence of antibiotic resistance genes (ARGs), considered a class of critical environmental contaminants due to their ubiquitous and persistent nature. Previous studies reported the potentiality of bio-electro-Fenton processes for antibiotic removal and ARGs control. However, the production and fate of ARGs in bio-electro-Fenton processes triggered by microbial fuel cells are rare. In this study, the norfloxacin (NFLX) average residual concentrations within two days were 2.02, 6.07 and 14.84 mg/L, and the average removal efficiency of NFLX was 79.8 %, 69.6 % and 62.9 % at the initial antibiotic concentrations of 10, 20 and 40 mg/L, respectively. The most prevalent resistance gene type in all processes was the fluoroquinolone antibiotic gene. Furthermore, Proteobacteria was the dominant ARG-carrying bacteria. Overall, this study can provide theoretical support for the efficient treatment of high antibiotics-contained wastewater by bio-electro-Fenton systems to better control ARGs from the perspective of ecological security.

Efficient electro-catalyzed PMS activation on a Fe-ZIF-8 based BTNAs/Ti anode: An in-depth investigation on anodic catalytic behavior

Phenanthrene (PHE), mainly released from coal tar and petroleum distillation, is an important kind of prevalent polycyclic aromatic hydrocarbons (PAHs) contamination in China (up to 2.38 ± 0.02 mg/kg in soil and 8668 ng/L in surface water) and other countries in the world. Metal-organic frameworks (MOFs) show promising application prospects in the decontamination field, however, suffering from the intrinsic fragility and fine powder forms. Therefore, macroscopic MOFs architecture-sandwich-like Fe-ZIF-8/blue TiO₂ nanotube arrays (BTNAs)/Ti substrate (FBTT) anode with strong interfacial bonding (Fe-O-Ti and Fe-2-MIM-Ti coordination) was constructed using innovative in situ growth, condensation-crystallization-deposition, and pyrolysis methods, aiming at exploring the feasibility of MOFs-based anode/peroxymonosulfate (PMS) mediated PHE elimination, revealing the in-depth mechanisms, simultaneously overcoming the intrinsic drawbacks of MOFs. The FBTT-4 (doping content of 30 %) efficiently degraded PHE by 90.01 % and 74.5 % within 10 min at 350 μg/L and 3 mg/L, respectively, mediated by the ^·OH compared to the SO₄^·-, ¹O₂, and O₂^·-. Post-optimized range of anodic potential enabled (i) anodic oxidation, (ii) activation of water and PMS molecules to produce active species, (iii) capture of electrons in reactants to reduce Fe³⁺/Ti⁴⁺ to Fe²⁺/Ti³⁺, maintaining the proportion of Fe/Ti with low valence and thus stable PMS activation capacity, and (iv) regulation of the Fe/Ti d-band center to modulate the anode adsorption capacity. The further increment in anodic potential could promote "dark photocatalysis" with a Z-scheme-like mechanism. Thus, it is proposed that the development of macroscopic MOFs-based anode, especially those with small band gaps, represents vast potentials in electrocatalytic contamination elimination. Simultaneously, the MOFs-based anode is expected to fully exploit their catalytic capacities and solve their intrinsic defects as well.

Vertically co-distributed vanadium and microplastics drive distinct microbial community composition and assembly in soil

Vanadium (V) and microplastics in soils draw increasing attention considering their significant threats to ecosystems. However, little is known about the vertical co-distribution of V and microplastics in soil profile and their combined effects on microbial community dynamics and assembly. This study investigated the spatial distribution of V and microplastics in the soils at a V smelting site and the associated microbial community characteristics along the vertical gradient. Both V and microplastics were found in the 50 cm soil profile with average concentrations of 203.5 ± 314.4 mg/kg and 165.1 ± 124.8 item/kg, respectively. Topsoil (0-20 cm) and subsoil (20-50 cm) displayed distinct microbial community compositions. Metal-tolerant (e.g., Spirochaeta, Rubellimicrobium) and organic-degrading (e.g., Bradyrhizobium, Pseudolabrys) taxa as biomarkers were more abundant in the topsoil layer. V and microplastics directly affected the microbial structure in the topsoil and had indirect influences in the subsoil, with direct impacts from organic matter. In topsoil, deterministic processes were more prevalent for community assembly, whereas stochastic processes governed the subsoil. The interspecific relationship was closer in topsoil with greater network complexity and higher modularity. These findings promote the understanding of distinct heterogeneity of microbial communities jointly driven by V and microplastics in soil environment.

Promotion effect of graphene on phytoremediation of Cd-contaminated soil

Echinacea purpurea (L.) Moench was selected as a remediation plant in this study, and different concentrations of graphene oxide (GO) were added to Cd-contaminated soil. Through pot experiments, the effect of E. purpurea on Cd-contaminated soil was determined at 60 days, 120 days, and 150 days. A preliminary study on the remediation mechanism of GO was explored through changes in the forms of Cd in the rhizosphere soil, soil pH, and soil functional groups. Results showed that the optimal concentration of GO was 0.4 g/kg, and under the condition, the accumulation of Cd in the roots of E. purpurea was as high as 113.69 ± 23.86 mg/kg, and the maximum EF reached 5.87 ± 1.34. Compared with those of the control group, accumulated Cd concentration and EF in the roots increased by 60.34% and 2.32, respectively. Correlation analysis showed that the absorption and accumulation of Cd was negatively correlated with the exchangeable Cd content at 120 days, and the exchangeable Cd was negatively correlated with the relative content of functional groups in the soil with 0.4 g/kg GO (E2). The artificial application of GO to the soil can be used as an effective way to improve the effect of E. purpurea in the remediation of Cd soil pollution, and it has great application potential in the stabilization of plants and vegetations and restoration of high-concentration Cd-contaminated soil.

Evaluation of key microbial community succession and enzyme activities of nitrogen transformation in pig manure composting process through multi angle analysis

This experiment aimed to investigate changes in enzyme activity, microbial succession, and nitrogen conversion caused by different initial carbon-to-nitrogen ratios of 25:1, 35:1 and 20:1 (namely CK, T1 and T2) during pig manure composting. The results showed that the lower carbon-to-nitrogen ratio (T2) after composting retained 19.64 g/kg of TN which was more than 16.74 and 17.32 g/kg in treatments of CK and T1, respectively, but excessive conversion of ammonium nitrogen to ammonia gas resulted in nitrogen loss. Additional straw in T1 could play the role as a bulking agent. After composting, TN in T1 retained the most, and TN contents were 63.51 %, 67.34 % and 56.24 % in CK, T1 and T2, respectively. Network analysis indicated that many types of microorganisms functioned as a whole community at various stages of nitrogen cycle. This study suggests that microbial community structure modification might be a good strategy to reduce ammonium nitrogen loss.

Biochar amendment of aerobic composting for the effective biodegradation of heavy oil and succession of bacterial community

Soil pollution caused by petroleum pollutants from production trade activities in petroleum-related factories contributes serious threat to the environment and human health. Composting is technically-feasible and cost-effective in the biodegradation of heavy oil pollutants. This composting experiment was developed with four rice husk biochar (RHB) concentrations of 0 wt% (CK), 5 wt% (S1), 10 wt% (S2) and 15 wt% (S3) for the degradation of heavy oil. The results showed that RHB amendment could strengthen the degradation performance of heavy oil, and the degradation efficiencies for CK, S1, S2 and S3 were 59.67%, 65.00%, 73.29% and 74.82%, respectively. Microbial community succession process was investigated through high-throughput sequencing technology, and the RHB addition regulated bacterial community succession and further effectively facilitated the biodegradation of heavy oil in composting. This study substantiated that biochar materials-amended aerobic composting would be a promising strategy for the biodegradation of petroleum pollutants.

Microalgae simultaneously promote antibiotic removal and antibiotic resistance genes/bacteria attenuation in algal-bacterial granular sludge system

This study investigated the effects of microalgae growth on antibiotic removal and the attenuation of antibiotic resistance genes (ARGs)/ARGs host bacteria in algal-bacterial granular sludge (ABGS) system. In the presence of tetracycline (TC) and sulfadiazine (SDZ) mixture (2-4 mg/L), microalgae could grow on bacterial granular sludge (BGS) to form ABGS, with a chlorophyll-a content of 7.68-8.13 mg/g-VSS being achieved. The removal efficiencies of TC and SDZ by ABGS were as high as 79.0 % and 94.0 %, which were 4.3-5.0 % higher than those by BGS. Metagenomic analysis indicated that the relative abundances of TC/SDZ- related ARGs and mobile genetic elements (MGEs) in BGS were 56.1 % and 22.1 % higher than those in ABGS. A total of 26 ARGs were detected from the granules, and they were identified to associate with 46 host bacteria. 13 out of 26 ARGs and 13 out of 46 hosts were shared ARGs and hosts, respectively. The total relative abundance of host bacteria in BGS was 30.8 % higher than that in ABGS. Scenedesmus and Chlorella were the dominant microalgae that may reduce the diversity of ARGs hosts. Overall, ABGS is a promising biotechnology for antibiotic-containing wastewater treatment.

Biochar enhanced polycyclic aromatic hydrocarbons degradation in soil planted with ryegrass: Bacterial community and degradation gene expression mechanisms

Biochar and ryegrass have been used in the remediation of polycyclic aromatic hydrocarbons (PAHs)-contaminated soils; however, the effects of different biochar application levels on the dissipation of PAHs, bacterial communities, and PAH-ring hydroxylating dioxygenase (PAH-RHDα) genes in rhizosphere soil remain unclear. In this study, enzyme activity tests, real-time quantitative polymerase chain reaction (PCR), and high-throughput sequencing were performed to investigate the effects of different proportions of rape straw biochar (1%, 2%, and 4% (w/w)) on the degradation of PAHs, as well as the associated changes in the soil bacterial community and PAH-RHDα gene expression. The results revealed that biochar enhanced the rhizoremediation of PAH-contaminated soil and that 2% biochar-treated rhizosphere soil was the most effective in removing PAHs. Furthermore, urease activity, abundance and activity of total bacteria, and PAH-degrading bacteria were enhanced in soil that was amended with biochar and ryegrass. Additionally, the activity of 16S rDNA and PAH-RHDα gram-negative (GN) genes increased with increasing biochar dosage and had a positive correlation with the removal of PAHs. Biochar changed the rhizosphere soil bacterial composition and α-diversity, and promoted the growth of Pseudomonas and Zeaxanthinibacter. In addition, the relative abundance of Pseudomonas was positively correlated with PAH removal. These findings imply that rape straw biochar can enhance the rhizoremediation of PAH-contaminated soil by changing soil bacterial communities and stimulating the expression of PAH-RHDα GN genes. The 2% of rape straw biochar combined with ryegrass would be an effective method to remediate the PAH-contaminated soil.

Modified and pristine biochars for remediation of chromium contamination in soil and aquatic systems

Chromium (Cr) contamination in soil and water poses high toxicity risks to organisms and threatens food and water security worldwide. Biochar has emerged as a promising material for cleaning up Cr contamination owing to biochar's strong capacity to immobilize Cr. This paper synthesizes information on biochar modification for the efficient remediation of Cr contamination in soil and water, and critically reviews mechanisms of Cr adsorption on pristine and modified biochars. Biochar modification methods include physical activation via ball milling or ultraviolet irradiation, chemical activation via magnetization, alkali/acid treatment, nano-fabrication or loading of reductive agents, and biological activation via integrating biochars with microorganisms and their metabolites. Modified biochars often have multi-fold enhancement in Cr adsorption/reduction capacity than pristine biochars. Iron (Fe)-supported magnetic biochars have the most promising Cr removal abilities with high reusability of the biochars. Pre-pyrolysis modification with Fe could load Fe₃O₄ micro-/nanoparticles on biochars, and increase the surface area and electrostatic attraction between chromate anions and biochar surfaces, and reduce Cr(VI) to Cr(III). Post-pyrolysis modification could enrich oxygen-containing functional groups such as CO and -OH on biochar surfaces and promote Cr reduction and adsorption. Future research directions for Cr mitigation using advanced biochar products are discussed in this review.

Enhancing bioelectrochemical performance of two-dimensional material attached by covalent/metal organic frameworks as cathode catalyst for microbial fuel cells

In this study, covalent/metal organic framework and two-dimensional material (COF-300/ZIF-8@Ti₃AlC₂) were composited by a three-step distributed feed method for cathode catalyst in microbial fuel cells (MFCs). The growth of irregular cube-like COF-300/ZIF-8 on the Ti₃AlC₂ substrate was observed. Al, Zn, Ti, N, C and O elements were observed uniformly and more active sites were offered through it. The external output voltage of COF-300/ZIF-8@Ti₃AlC₂-MFC was 576 mV and this could be almost unchanged for 9 days. The external output power density was 587.01 mW/m², and that was 1.25 times of COF-300@Ti₃AlC₂-MFC (469.30 mW/m²) and 1.67 times of COF-300/ZIF-8-MFC (352.09 mW/m²). Ti₃AlC₂ enhanced the electrical conductivity of the composite by its rich surface functional groups and much more surface active sites. COF-300/ZIF-8 mixture improved the instability and disorder of the monomer. This study would supply technical support for the expanded request of composite materials in microbial electrochemistry.

Distribution, source, and health risk assessment of polycyclic aromatic hydrocarbons in the soils from a typical petroleum refinery area in south China

The ubiquity of polycyclic aromatic hydrocarbons (PAHs) in soils in petroleum refining areas is an important problem affecting human and ecological safety. In this study, 103 topsoil (0-0.50 m) samples were collected from a retired petroleum refinery area in Guangdong province, south China. The PAHs concentrations were determined by ultrasonic extraction and gas chromatography-mass spectrometry detection methods. Twelve PAHs controlled priority listed by the US Environmental Protection Agency (USEPA) were investigated. The results revealed that the concentration of Ʃ₁₂PAHs ranged from 2100 to 5200 µg kg^-1, with a mean value of 3741.66 µg kg^-1. The site was dominated by high rings PAHs (4-, 5-, and 6-ring), contributing 81.96% to Ʃ₁₂PAHs. The concentrations of 9 kinds of PAHs exceeded the Dutch soil quality standard. Besides, the PAHs were primarily distributed in the storage tank area and with high levels of contamination. The results of hierarchical cluster analysis (HCA) and principal component analysis (PCA) indicated that coal combustion was the source of PAHs in topsoil, followed by petroleum dripping and traffic emissions. The incremental lifetime cancer risk (ILCR) modeling illustrated that soil ingestion was the major pathway of PAH exposure for both adults and children. Notably, the total noncarcinogenic human health risk due to PAHs was within the limit of 1, while the carcinogenic risks alone caused by benzo(a)pyrene via soil ingestion to adults and children were obviously beyond the USEPA limit (1.00E -06). Therefore, PAHs in the petroleum refinery areas have potential carcinogenic hazards to human health, the area should be remediated before reuse.

Relationship between graphene and pedosphere: A scientometric analysis

The mass production and application of graphene have gradually expanded from academic research to industrial applications, which will inevitably lead to graphene entering the soil actively and passively. Therefore, the relationship between graphene and the pedosphere has attracted a lot of attention in the last decade. The most important question is whether graphene will harm soil health. Fortunately, the evidence is that graphene can alter soil physicochemical properties and microbial communities to some extent, but not dramatically. On this basis, the role of graphene in soil has been investigated in all directions. This review summarizes the literature on the relationship between graphene and soils. Topics include remediation and sensing of soil using graphene materials, the effects of graphene on soil, and the effects of graphene in soil on plant growth. At the same time, this review also uses bibliometrics to review the history of the topic. The number of papers published each year, participating countries, participating institutions and important articles were analyzed in detail. Finally, based on the published literature, we described the future perspectives of graphene and the pedosphere.

Distinct response patterns of bacterial communities in Ag- and ZnO-rGO nanocomposite-amended silt loam soils

The widespread application of metal-based nanoparticle (MNPs)/reduced graphene oxide (rGO) composites inevitably leads to their release into soils. However, we lack a detailed understanding of the bacterial community response to MNPs-rGO exposure in farmland soils. Here, we conducted a soil microcosm experiment to analyze the potential impact of MNPs-rGO on bacterial communities in two field soils via high-throughput sequencing. The change in alpha diversity of bacterial communities was more susceptible to Ag-rGO and ZnO-rGO treatments than CuO-rGO. In both soils, MNPs-rGO significantly changed the bacterial community structure even at a low dose (1 mg kg^-1). The bacterial community structure was most strongly affected by Ag-rGO at 30 days, but the greatest changes occurred in ZnO-rGO at 60 days. The differences in soil properties could shape bacterial communities to MNPs-rGO exposure. Distance-based redundancy analysis and functional annotation of prokaryotic taxa showed that some bacterial species associated with nitrogen cycling were greatly influenced by Ag-rGO and ZnO-rGO exposure. In sum, Ag-rGO and ZnO-rGO may potentially affect bacterial communities and nitrogen turnover under long-term realistic field exposure. These findings present a perspective on the response of bacterial communities to MNPs-rGO and provide a fundamental basis for estimating the ecological behavior of MNPs-rGO.

Prochloraz alone or in combination with nano-CuO promotes the conjugative transfer of antibiotic resistance genes between Escherichia coli in pure water

Conjugative plasmid transfer is a major contributor to the spread of antibiotic resistance genes (ARGs). However, the role of conventional fungicides on conjugative plasmid transfer has been neglected. Based on the condition that the increasing use of the combination of nano- and conventional fungicides will lead to combined contamination, the effects of a conventional fungicide prochloraz alone or in combination with nano-CuO on the conjugation of plasmid RP4 between Escherichia coli in phosphate-buffered saline were investigated in this study. The results demonstrated that 50 µg/L prochloraz alone significantly increased the conjugative transfer by 1.82 folds. The combination of 100 µg/L nano-CuO and prochloraz at 5, 50, and 500 µg/L significantly increased the conjugation by 2.56, 3.61, and 2.13 folds, respectively. The promotion of conjugative transfer of ARGs mediated by fungicides is mainly attributed to (i) the increased cell membrane permeability, (ii) the increased cell adhesion via enhancing the synthesis of polysaccharides in extracellular polymeric substances, and (iii) the up-regulation of the genes relevant to conjugation, oxidative stress, SOS response, outer membrane, polysaccharide export, intercellular adhesion, and ATP synthesis. Our findings provide evidence for the contribution of fungicides to ARGs transfer, which is significant to control the risk of ARGs dissemination.

GO-based antibacterial composites: Application and design strategies

Graphene oxide (GO), for its unique structure with high biocompatibility and designability, is widely used in the antibacterial field. Various strategies have been designed to fabricate GO-based composites with antibacterial properties. This review summarized these strategies, divided them into three types and interpreted their antibacterial mechanisms: (i) "GO*/non-GO" type in which GO acts as the single antibacterial core, (ii) "GO*/non-GO*" type in which GO and non-GO components function synergistically as dual antibacterial cores, (iii) "GO/non-GO*" type in which non-GO acts as the single antibacterial core, while GO component plays a supportive, not a dominant role in antibiosis. Besides, the fields suiting their applications and factors influencing their antibacterial properties were analyzed. Finally, the limitations and prospects in the current researches were discussed. In summary, GO-based composites have revolutionized antibacterial strategies. This review may serve as a reference to inspire further research on GO-based antibacterial composites.