Evaluating Functional Diversity: Missing Trait Data and the Importance of Species Abundance Structure and Data Transformation

Biodiversity and productivity in eastern US forests

Despite experimental and observational studies demonstrating that biodiversity enhances primary productivity, the best metric for predicting productivity at broad geographic extents-functional trait diversity, phylogenetic diversity, or species richness-remains unknown. Using >1.8 million tree measurements from across eastern US forests, we quantified relationships among functional trait diversity, phylogenetic diversity, species richness, and productivity. Surprisingly, functional trait and phylogenetic diversity explained little variation in productivity that could not be explained by tree species richness. This result was consistent across the entire eastern United States, within ecoprovinces, and within data subsets that controlled for biomass or stand age. Metrics of functional trait and phylogenetic diversity that were independent of species richness were negatively correlated with productivity. This last result suggests that processes that determine species sorting and packing are likely important for the relationships between productivity and biodiversity. This result also demonstrates the potential confusion that can arise when interdependencies among different diversity metrics are ignored. Our findings show the value of species richness as a predictive tool and highlight gaps in knowledge about linkages between functional diversity and ecosystem functioning.

Multiple drivers of functional diversity in temperate forest understories: Climate, soil, and forest structure effects

In macroecology, shifting from coarse- to local-scale explanatory factors is crucial for understanding how global change impacts functional diversity (FD). Plants possess diverse traits allowing them to differentially respond across a spectrum of environmental conditions. We aim to assess how macro- to microclimate, stand-scale measured soil properties, forest structure, and management type, influence forest understorey FD at the macroecological scale. Our study covers Italian forests, using thirteen predictors categorized into climate, soil, forest structure, and management. We analyzed five traits (i.e., specific leaf area, plant size, seed mass, belowground bud bank size, and clonal lateral spread) capturing independent functional dimensions to calculate the standardized effect size of functional diversity (SES-FD) for all traits (multi-trait) and for single traits. Multiple regression models were applied to assess the effect of predictors on SES-FD. We revealed that climate, soil, and forest structure significantly drive SES-FD of specific leaf area, plant size, seed mass, and bud bank. Forest management had a limited effect. However, differences emerged between herbaceous and woody growth forms of the understorey layer, with herbaceous species mainly responding to climate and soil features, while woody species were mainly affected by forest structure. Future warmer and more seasonal climate could reduce the diversity of resource economics, plant size, and persistence strategies of the forest understorey. Soil eutrophication and acidification may impact the diversity of regeneration strategies; canopy closure affects the diversity of above- and belowground traits, with a larger effect on woody species. Multifunctional approaches are vital to disentangle the effect of global changes on functional diversity since independent functional specialization axes are modulated by different drivers.

Transnational conservation to anticipate future plant shifts in Europe

To meet the COP15 biodiversity framework in the European Union (EU), one target is to protect 30% of its land by 2030 through a resilient transnational conservation network. The European Alps are a key hub of this network hosting some of the most extensive natural areas and biodiversity hotspots in Europe. Here we assess the robustness of the current European reserve network to safeguard the European Alps' flora by 2080 using semi-mechanistic simulations. We first highlight that the current network needs strong readjustments as it does not capture biodiversity patterns as well as our conservation simulations. Overall, we predict a strong shift in conservation need through time along latitudes, and from lower to higher elevations as plants migrate upslope and shrink their distribution. While increasing species, trait and evolutionary diversity, migration could also threaten 70% of the resident flora. In the face of global changes, the future European reserve network will need to ensure strong elevation and latitudinal connections to complementarily protect multifaceted biodiversity beyond national borders.

Testing the hierarchy of predictability in grassland restoration across a gradient of environmental severity

Ecological restoration is critical for recovering degraded ecosystems but is challenged by variable success and low predictability. Understanding which outcomes are more predictable and less variable following restoration can improve restoration effectiveness. Recent theory asserts that the predictability of outcomes would follow an order from most to least predictable from coarse to fine community properties (physical structure > taxonomic diversity > functional composition > taxonomic composition) and that predictability would increase with more severe environmental conditions constraining species establishment. We tested this "hierarchy of predictability" hypothesis by synthesizing outcomes along an aridity gradient with 11 grassland restoration projects across the United States. We used 1829 vegetation monitoring plots from 227 restoration treatments, spread across 52 sites. We fit generalized linear mixed-effects models to predict six indicators of restoration outcomes as a function of restoration characteristics (i.e., seed mixes, disturbance, management actions, time since restoration) and used variance explained by models and model residuals as proxies for restoration predictability. We did not find consistent support for our hypotheses. Physical structure was among the most predictable outcomes when the response variable was relative abundance of grasses, but unpredictable for total canopy cover. Similarly, one dimension of taxonomic composition related to species identities was unpredictable, but another dimension of taxonomic composition indicating whether exotic or native species dominated the community was highly predictable. Taxonomic diversity (i.e., species richness) and functional composition (i.e., mean trait values) were intermittently predictable. Predictability also did not increase consistently with aridity. The dimension of taxonomic composition related to the identity of species in restored communities was more predictable (i.e., smaller residuals) in more arid sites, but functional composition was less predictable (i.e., larger residuals), and other outcomes showed no significant trend. Restoration outcomes were most predictable when they related to variation in dominant species, while those responding to rare species were harder to predict, indicating a potential role of scale in restoration predictability. Overall, our results highlight additional factors that might influence restoration predictability and add support to the importance of continuous monitoring and active management beyond one-time seed addition for successful grassland restoration in the United States.

Plant functional traits and biodiversity can reveal the response of ecosystem functions to grazing

Plant functional traits can elucidate the response of plant communities and ecosystems to biotic and abiotic disturbances. However, whether livestock consume more aboveground biomass (AGB) in communities dominated by species with 'acquisitive' traits or in communities where biodiversity is high is not well known. Here, we measured 22 functional traits of the grazing communities and control communities in a Mongolian Plateau desert steppe. The effects of grazing on AGB, CWM traits, species diversity, and functional diversity (FD) were analysed, furthermore, we estimated the grazing impact by using the log response ratio (LRR, an increasing value shows a higher grazing impact) and investigated the correlations between the LRR, plant growth, and community-weighted mean (CWM) traits and diversity indices. We found that grazing significantly increased the CWM dry matter content and carbon-to‑nitrogen ratio and decreased the CWM height, specific leaf area (SLA), and nitrogen and phosphorus contents. The AGB decreased, while species diversity and FD increased under grazing treatments. Additionally, we found that plant traits and biodiversity could predict the response of AGB to grazing, the LRR was higher in patches dominated by species with 'acquisitive' foliage and in patches with higher biodiversity; in these patches, plant growth was lower. In the study area, the response of CWM traits to grazing suggests an avoidance strategy, which may be more conducive for adapting to low resource utilization environments. Also, the relationship between the CWM traits and the LRR indicated that the effect of grazing on AGB was mainly related to the selective foraging of herbivores. In addition, patches preferred by livestock may not recover quickly, leading to slow growth and thus reduced biomass under grazing treatments after prolonged grazing.

Riparian forest response to extreme drought is influenced by climatic context and canopy structure

Droughts significantly impact forest ecosystems, reducing forest health and productivity, compromising ecosystem functioning, and nature-based solutions for climate change. The response and resilience of riparian forests to drought are poorly understood despite their key role in the functioning of aquatic and terrestrial ecosystems. Here we investigate riparian forest drought responses and resilience to an extreme drought event at a regional scale. We also examine how drought event characteristics, average climate conditions, topography, soil, vegetation structure, and functional diversity shape the resilience of riparian forests to drought. We used a time series of the Normalized Difference Vegetation Index (NDVI) and Normalized Difference Water Index (NDWI) to calculate the resistance to and recovery after an extreme drought (2017-2018) in 49 sites across an Atlantic-Mediterranean climate gradient in North Portugal. We used generalized additive models and multi-model inference to understand which factors best explained drought responses. We found a trade-off between drought resistance and recovery (maximum r = -0.5) and contrasting strategies across the climatic gradient of the study area. Riparian forests in the Atlantic regions showed comparatively higher resistance, while Mediterranean forests recovered more. Canopy structure and climate context were the most relevant predictors of resistance and recovery. However, median NDVI and NDWI had not returned to pre-drought levels (Rc_NDWI mean = 1.21, Rc_NDVI mean = 1.01) three years after the event. Our study shows that riparian forests have contrasting drought response strategies and may be susceptible to extended legacy effects associated with extreme and/or recurring droughts, similarly to upland forests. This work highlights the drought vulnerability of riparian ecosystems and emphasises the need for further studies on long-term resilience to droughts.

Response-effect trait overlap and correlation in riparian plant communities suggests sensitivity of ecosystem functioning and services to environmental change

Environmental changes and biodiversity loss have emphasized the need to understand how communities affect ecosystem functioning and services. In riparian ecosystems, integrative, generalizable, broad-scale models of ecosystem functioning are still required to fulfill this need. However, few studies have explored the links between functional traits, ecosystem functions, and the services of riparian vegetation. Here we adapt the response-effect trait framework to link drivers, traits, ecosystem functions, and services in riparian ecosystems and assess ecosystem functioning sensitivity to environmental changes. The response-effect trait framework distinguishes between traits related to responses to the environment (response traits) and effects on ecosystem functioning (effect traits). The framework predicts that if response and effect traits are tightly linked, shifts in environmental drivers may alter communities' traits and ecosystem functioning. We adapted the response-effect trait framework for riparian plant communities and used it to assess the overlap between response and effect traits. We tested for correlation among traits identified in the framework and for community functional responses to climatic, topographic, soil, and land cover factors using riparian plant communities along a Temperate-Mediterranean climate gradient in North Portugal. We found a high overlap between response and effect traits, with seven out of thirteen traits identified as both response and effect. Additionally, we found trait linkages in four groups of positively correlated community mean traits. Precipitation and aridity were the most predictive drivers of community functional structure, and life form and leaf area were the most responsive traits. Overall, our findings suggest riparian plant communities are likely to propagate the effects of environmental changes to ecosystem functioning and services, affecting several regulation ecosystem services. This work highlights the sensitivity of riparian ecosystems to environmental changes and how it can affect ecosystem services. Similar functional approaches can be useful for adaptive ecosystem management to sustain biodiversity and ecosystem services.

Initial assemblage characteristics determine the functional dynamics of flower-strip plant communities

In agroecosystems, species‐rich habitats, such as linear field margins and flower strips, are beneficial to the overall biodiversity and contribute to pest control. Their effects are thought to be mediated by plant species composition and diversity. However, the management of plant communities with targeted levels of functional diversity has been little investigated. In an open field landscape, we compared the effects of the sown species richness (9, 14, and 29 species) and functional diversity (high vs. low) of eight different seed mixtures, sown in flower strips, on the 4‐year temporal dynamics of their functional diversity. There was a good agreement between the expected and realized species richness and functional diversity at the start of the experiment. All plant assemblages progressively lost species over time, but this decline was lower for assemblages sown with a high initial functional diversity, in which species evenness was maintained at higher levels. Species‐rich assemblages had a higher degree of functional redundancy, and their functional diversity remained higher over time than less rich assemblages. A possible explanation for this is that functional redundancy would have enabled the compensation for the loss of species by functionally equivalent species. The realized functional diversity of the sown species also limited the establishment of spontaneous species, perhaps due to a higher degree of niche occupancy. This study provides useful insight into the creation of functionally diversified plant communities. A high level of initial species and functional diversity is required to guarantee a greater temporal persistence of the communities.

Advancing biological invasion hypothesis testing using functional diversity indices

Pioneering investigations on the effects of introduced populations on community structure, ecosystem functioning and services have focused on the effects of invaders on taxonomic diversity. However, taxonomic-based diversity metrics overlook the heterogeneity of species roles within and among communities. As the homogenizing effects of biological invasions on community and ecosystem processes can be subtle, they may require the use of functional diversity indices to be properly evidenced. Starting from the listing of major functional diversity indices, alongside the presentation of their strengths and limitations, we focus on studies pertaining to the effects of invasive species on native communities and recipient ecosystems using functional diversity indices. By doing so, we reveal that functional diversity of the recipient community may strongly vary at the onset of the invasion process, while it stabilizes at intermediate and high levels of invasion. As functional changes occurring during the lag phase of an invasion have been poorly investigated, we show that it is still unknown whether there are consistent changes in functional diversity metrics that could indicate the end of the lag phase. Thus, we recommend providing information on the invasion stage under consideration when computing functional diversity metrics. For the existing literature, it is also surprising that very few studies explored the functional difference between organisms from the recipient communities and invaders of the same trophic levels, or assessed the effects of non-native organism establishment into a non-analogue versus an analogue community. By providing valuable tools for obtaining in-depth diagnostics of community structure and functioning, functional diversity indices can be applied for timely implementation of restoration plans and improved conservation strategies. To conclude, our work provides a first synthetic guide for their use in hypothesis testing in invasion biology.

Functional traits and their plasticity shift from tolerant to avoidant under extreme drought

Under climate change, extreme droughts will limit water availability for plants. However, the species-specific responses make it difficult to draw general conclusions. We hypothesized that changes in species' abundance in response to extreme drought can be best explained by a set of water economic traits under ambient conditions in combination with the ability to adjust these traits towards higher drought resistance. We conducted a four-year field experiment in temperate grasslands using rainout shelters with 30% and 50% rainfall reduction. We quantified the response as the change in species abundance between ambient conditions and the rainfall reduction. Abundance response to extreme drought was best explained by a combination of traits in ambient conditions and their functional adjustment, most likely reflecting plasticity. Smaller leaved species decreased less in abundance under drought. With increasing drought intensity, we observed a shift from drought tolerance, i.e. an increase in leaf dry matter content, to avoidance, i.e. a less negative turgor loss point (TLP) in ambient conditions and a constancy in TLP under drought. We stress the importance of using a multidimensional approach of variation in multiple traits and the importance of considering a range of drought intensities to improve predictions of species' response to climate change.

Biodiversity at the global scale: the synthesis continues

Traditionally, the generation and use of biodiversity data and their associated specimen objects have been primarily the purview of individuals and small research groups. While deposition of data and specimens in herbaria and other repositories has long been the norm, throughout most of their history, these resources have been accessible only to a small community of specialists. Through recent concerted efforts, primarily at the level of national and international governmental agencies over the last two decades, the pace of biodiversity data accumulation has accelerated, and a wider array of biodiversity scientists has gained access to this massive accumulation of resources, applying them to an ever-widening compass of research pursuits. We review how these new resources and increasing access to them are affecting the landscape of biodiversity research in plants today, focusing on new applications across evolution, ecology, and other fields that have been enabled specifically by the availability of these data and the global scope that was previously beyond the reach of individual investigators. We give an overview of recent advances organized along three lines: broad-scale analyses of distributional data and spatial information, phylogenetic research circumscribing large clades with comprehensive taxon sampling, and data sets derived from improved accessibility of biodiversity literature. We also review synergies between large data resources and more traditional data collection paradigms, describe shortfalls and how to overcome them, and reflect on the future of plant biodiversity analyses in light of increasing linkages between data types and scientists in our field.

Veteran trees have divergent effects on beetle diversity and wood decomposition

Veteran hollow trees are keystone structures in ecosystems and provide important habitat for a diverse set of organisms, many of which are involved in the process of decomposition. Since veteran trees are 'islands' of high biodiversity, they provide a unique system in which to study the relationship between biodiversity and decomposition of wood. We tested this relationship with a balanced experiential design, where we quantified the taxonomic and functional diversity of beetles directly involved in the process of decomposing wood, and measured the decomposition of experimentally added bundles of small diameter wood around 20 veteran trees and 20 nearby young trees in southern Norway. We found that the diversity (both taxonomic and functional) of wood-decomposing beetles was significantly higher around the veteran trees, and beetle communities around veteran trees consisted of species with a greater preference for larger diameter wood. We extracted few beetles from the experimentally added wood bundles, regardless of the tree type that they were placed near, but decomposition rates were significantly lower around veteran trees. We speculate that slower decomposition rates around veteran trees could have been a result of a greater diversity of competing fungi, which has been found to decrease decay rates. Veteran trees provide an ecological legacy within anthropogenic landscapes, enhance biodiversity and influence wood decomposition. Actions to protect veteran trees are urgently needed in order to save these valuable organisms and their associated biodiversity.

Does abiotic noise promote segregation of functional diversity in Neotropical anuran assemblages?

The abiotic noise of streams can mask the acoustic signals of anurans with a large body size calling at low frequencies, but not the signals emitted by anurans with a small body size calling at high frequencies. As a consequence, the body size of species in assemblages alongside streams is, on average, lower and less variable than that of assemblages away from streams. Given that the body size in anurans is frequently related to life-history traits, it is expected that functional diversity (FD) will be lower in anuran assemblages alongside streams than in assemblages away from streams. We calculated and compared FD, based on six functional traits, for anuran species in seven localities in different biogeographical regions in the Neotropics. In five lowland localities, FD was lower in assemblages alongside streams than in assemblages away from streams. However, the reverse trend was found in two Andean localities. Noise from streams, acting as an environmental filter, could promote low FD because taxa whose phenotype differs from an optimal type (high call frequency, small body size and associated traits) are excluded from riparian places. However, such habitat filtering could be stronger and affect more anurans in lowland assemblages than in those at medium elevation.

Veteran trees are a source of natural enemies

Predation of invertebrate pest by natural enemies is a critical contribution of nature to people, because invertebrate pests cause a vast amount of economic damage and pesticides use has many long-term costs. Veteran trees are keystone structures and hotspots for biodiversity, and are a potential source of natural enemies. To explore this, we used a balanced experimental design where we measured predatory beetle diversity and attack marks on three colors of artificial caterpillars placed around 20 veteran oaks and 20 nearby young oaks, in Southern Norway. We predicted that around the veteran oaks there would be a greater diversity of predatory beetles and more invertebrate attacks on artificial caterpillars. Sampling for predatory beetles was conducted in summer 2017 and 2018, and invertebrate attacks were measured in 2018. We found support for the predictions: diversity of predatory beetles was higher around veteran trees and there were more arthropod attack marks on artificial caterpillars placed around veteran trees. Our results indicated that veteran trees are a source of natural enemies. Valuing and protecting veteran trees and their communities is an essential step towards a more sustainable system of management that has the possibility of promoting both the wellbeing of people and biodiversity.

Effects of future agricultural change scenarios on beneficial insects

Insects provide vital ecosystem services to agricultural systems in the form of pollination and natural pest control. However, there are currently widespread declines in the beneficial insects which deliver these services (i.e. pollinators and 'natural enemies' such as predators and parasitoids). Two key drivers of these declines have been the expansion of agricultural land and intensification of agricultural production. With an increasing human population requiring additional sources of food, further changes in agricultural land use appear inevitable. Identifying likely trajectories of change and predicting their impacts on beneficial insects provides a scientific basis for making informed decisions on the policies and practices of sustainable agriculture. We created spatially explicit, exploratory scenarios of potential changes in the extent and intensity of agricultural land use across Great Britain (GB). Scenarios covered 52 possible combinations of change in agricultural land cover (i.e. agricultural expansion or grassland restoration) and intensity (i.e. crop type and diversity). We then used these scenarios to predict impacts on beneficial insect species richness and several metrics of functional diversity at a 10km (hectad) resolution. Predictions were based on species distribution models derived from biological records, comprising data on 116 bee species (pollinators) and 81 predatory beetle species (natural enemies). We identified a wide range of possible consequences for beneficial insect species richness and functional diversity as result of future changes in agricultural extent and intensity. Current policies aimed at restoring semi-natural grassland should result in increases in the richness and functional diversity of both pollinators and natural enemies, even if agricultural practices remain intensive on cropped land (i.e. land-sparing). In contrast, any expansion of arable land is likely to be accompanied by widespread declines in richness of beneficial insects, even if cropping practices become less intensive (i.e. land-sharing), although effects of functional diversity are more mixed.

Functional composition and diversity of leaf traits in subalpine versus alpine vegetation in the Apennines

Mediterranean high mountain grasslands are shaped by climatic stress and understanding their functional adaptations can contribute to better understanding ecosystems' response to global change. The present work analyses the plant functional traits of high-elevation grasslands growing in Mediterranean limestone mountains to explore, at the community level, the presence of different plant strategies for resource use (conservative vs. acquisitive) and functional diversity syndromes (convergent or divergent). Thus, we compared the functional composition and diversity of the above-ground traits related to resource acquisition strategies of subalpine and alpine calcareous grasslands in the central Apennines, a mountain region characterized by a dry-summer Mediterranean climate. We used georeferenced vegetation plots and field-measured plant functional traits (plant maximum height, specific leaf area and leaf dry matter content) for the dominant species of two characteristic vegetation types: the subalpine Sesleria juncifolia community and the alpine Silene acaulis community. Both communities are of particular conservation concern and are rich in endemic species for which plant functional traits are measured here for the first time. We analysed the functional composition and diversity using the community-weighted mean trait index and the functional diversity using Rao's function, and we assessed how much the observed pattern deviated from a random distribution by calculating the respective standardized effect sizes. The results highlighted that an acquisitive resource use strategy and relatively higher functional diversity of leaf traits prevail in the alpine S. acaulis community, optimizing a rapid carbon gain, which would help overcome the constraints exerted by the short growing season. The divergent functional strategy underlines the co-occurrence of different leaf traits in the alpine grasslands, which shows good adaptation to a microhabitat-rich environment. Conversely, in the subalpine S. juncifolia grassland, a conservative resource use strategy and relatively lower functional diversity of the leaf traits are likely related to a high level resistance to aridity over a longer growing season. Our outcomes indicate the preadaptation strategy of the subalpine S. juncifolia grassland to shift upwards to the alpine zone that will become warmer and drier as a result of anthropogenic climate change.

Hollow oaks and beetle functional diversity: Significance of surroundings extends beyond taxonomy

Veteran hollow oaks (Quercus spp.) are keystone structures hosting high insect diversity but are declining in numbers due to intensification of land use and the abandonment of traditional management. The loss of this vital habitat is resulting in a reduction of biodiversity, and this likely has consequences for ecosystem functioning, especially if functional diversity is reduced. A considerable amount of research has been done on predictors of beetle taxonomic diversity in veteran oaks, but predictors of functional diversity have remained largely unexplored. The aim of this study was to establish whether the features and surroundings of veteran oaks are related to functional diversity within three functional groups of beetles (decomposers, predators, and flower visitors) and determine whether species richness and functional diversity within the groups are dependent on the same predictors. Sampling was carried out intermittently between 2004 and 2011 on 61 veteran oaks in Southern Norway. Of the 876 beetle species that were collected, 359 were determined to be decomposers, 284 were predators, and 85 were flower visitors. Species richness and functional diversity in all groups were consistently higher in traps mounted on veteran oaks in forests than in open landscapes. However, additional predictors differed between groups, and for species richness and functional diversity. Decomposer species richness responded to tree vitality, while functional diversity responded to habitat connectivity, predator species richness responded to regrowth of shrubs while functional diversity responded to tree circumference, and flower visitor richness and functional diversity did not respond to any additional predictors. Previous studies have found that the features and surroundings of veteran oaks are important for conservation of taxonomic diversity, and the results from this study indicate that they are also important for functional diversity within multiple functional groups.

Intransitivity increases plant functional diversity by limiting dominance in drylands worldwide

1. Biotic interactions are key determinants of plant community structure. Indirect interactions such as intransitivity (i.e. in the absence of competitive hierarchies among species) have been hypothesized to benefit diversity within plant communities. However, their effect on functional diversity remains scarcely explored in real communities. Here we develop a novel approach to infer intransitivity from plant spatial patterns and functional traits (height and specific leaf area), and quantify its effect on different components of plant diversity along environmental gradients in 100 drylands from all continents except Antarctica. 2. We first calculated the spatial association pattern for all perennials to infer competition between species. Trait values were used as a proxy of competitive hierarchies to infer the direction of these interactions. We used multiple regression models to evaluate how intransitivity responds to environmental variables (mean annual temperature and precipitation, precipitation seasonality, soil pH, sand content and woody cover). We also used confirmatory path analysis to evaluate the effects of intransitivity on species richness and evenness, trait dispersion and functional diversity. 3. Intransitivity mostly responded to climatic variables, and significantly increased with precipitation scarcity and seasonality. We found that intransitivity had significant effects on functional diversity, mostly by promoting plant community evenness. However, the dominance of woody vegetation (steppes vs. shrublands) modulated this effect.

SYNTHESIS

Intransitivity increased the functional diversity of drylands, particularly under high rainfall seasonality, by limiting functionally dominant species. Our findings specify how intransitivity structures the functional diversity of dryland vegetation worldwide. Intransitivity may be particularly important in ecosystems where the availability of abiotic resources changes over time, thereby breaking down inherent competitive hierarchies between plant species. Neglecting intransitivity will bias our estimation of the impacts of biotic interactions on plant communities, a fundamental issue to fully understand how plant communities will respond to ongoing environmental changes.

Trade-off shapes diversity in eco-evolutionary dynamics

We introduce an Interaction- and Trade-off-based Eco-Evolutionary Model (ITEEM), in which species are competing in a well-mixed system, and their evolution in interaction trait space is subject to a life-history trade-off between replication rate and competitive ability. We demonstrate that the shape of the trade-off has a fundamental impact on eco-evolutionary dynamics, as it imposes four phases of diversity, including a sharp phase transition. Despite its minimalism, ITEEM produces a remarkable range of patterns of eco-evolutionary dynamics that are observed in experimental and natural systems. Most notably we find self-organization towards structured communities with high and sustained diversity, in which competing species form interaction cycles similar to rock-paper-scissors games.

Transcending data gaps: a framework to reduce inferential errors in ecological analyses

The analysis of functional diversity (FD) has gained increasing importance due to its generality and utility in ecology. In particular, patterns in the spatial distribution and temporal change of FD are being used to predict locations and functional groups that are immediately vulnerable to global changes. A major impediment to the accurate measurement of FD is the pervasiveness of missing data in trait datasets. While such prevalent data gaps can engender misleading inferences in FD analyses, we currently lack any practical guide to handle missing data in trait datasets. Here, we identify significant mismatches between true FD and values derived from datasets that contain missing data. We demonstrate that imputing missing data with a phylogeny-informed approach reduces the risk of misinterpretation of FD patterns, and provides baseline information against which central questions in ecology can be evaluated.

Homogenization and impoverishment of taxonomic and functional diversity of ants in Eucalyptus plantations

Despite its negative impacts on the environment and biodiversity, tree plantations can contribute to biodiversity conservation in fragmented landscapes, as they harbor many native species. In this study, we investigated the impact of Eucalyptus plantations on the taxonomic and functional diversity of ant communities, comparing ant communities sampled in managed and unmanaged (abandoned for 28 years) Eucalyptus plantations, and native Atlantic rain forests. Eucalyptus plantations, both managed and unmanaged, reduced the functional diversity and increased the similarity between ant communities leading to functional homogenization. While communities in managed plantations had the lowest values of both taxonomic and functional ant diversities, ant communities from unmanaged plantations had similar values of species richness, functional redundancy and Rao's Q compared to ant communities from forest patches (although functional richness was lower). In addition, communities in unmanaged Eucalyptus plantations were taxonomically and functionally more similar to communities located in managed plantations, indicating that Eucalyptus plantations have a severe long-term impact on ant communities. These results indicate that natural regeneration may mitigate the impact of Eucalyptus management, particularly regarding the functional structure of the community (α diversity), although it does not attenuate the effects of long term homogenization in community composition (β diversity).

Changes in copper toxicity towards diatom communities with experimental warming

Biological communities in aquatic environments most commonly face multiple stress, where natural and anthropogenic stressors often act jointly. Their interactions are most easily assessed using short cycle organisms such as periphytic diatoms. In this experiment, we analyzed the combined effects of copper exposure and warming on diatom successions over 6 weeks. Natural biofilm collected in winter was left to grow in mesocosms exposed or unexposed to realistic Cu concentrations at four different temperatures. Separate and joint impacts of the two stressors were determined through structural and functional endpoints. Both temperature and copper influenced the biological responses; their interaction, when significant, was always antagonistic. Diatom communities gradually changed with rising temperature. Under copper exposure, the dominant Planothidium lanceolatum was superseded by Achnanthidium exiguum, which accounted for about 70% relative abundance in the warmest conditions (18-23°C). Tolerance to copper was derived from dose-response curves based on photosynthesis inhibition. Cu-induced community tolerance was always found, but it decreased with warming and time. Biodiversity loss associated with lower Cu tolerance under combined Cu exposure and increasing temperatures evidences the major influence of cumulative stressors on aquatic health. These results highlight the crucial interplay between environmental stressors, which are expected to intensify with climate change.

Testing the environmental filtering concept in global drylands

1. The environmental filtering hypothesis predicts that the abiotic environment selects species with similar trait values within communities. Testing this hypothesis along multiple - and interacting - gradients of climate and soil variables constitutes a great opportunity to better understand and predict the responses of plant communities to ongoing environmental changes. 2. Based on two key plant traits, maximum plant height and specific leaf area (SLA), we assessed the filtering effects of climate (mean annual temperature and precipitation, precipitation seasonality), soil characteristics (soil pH, sand content and total phosphorus) and all potential interactions on the functional structure and diversity of 124 dryland communities spread over the globe. The functional structure and diversity of dryland communities were quantified using the mean, variance, skewness and kurtosis of plant trait distributions. 3. The models accurately explained the observed variations in functional trait diversity across the 124 communities studied. All models included interactions among factors, i.e. climate - climate (9% of explanatory power), climate - soil (24% of explanatory power) and soil - soil interactions (5% of explanatory power). Precipitation seasonality was the main driver of maximum plant height, and interacted with mean annual temperature and precipitation. Soil pH mediated the filtering effects of climate and sand content on SLA. Our results also revealed that communities characterized by a low variance can also exhibit low kurtosis values, indicating that functionally contrasting species can co-occur even in communities with narrow ranges of trait values. 4. Synthesis We identified the particular set of conditions under which the environmental filtering hypothesis operates in drylands worldwide. Our findings also indicate that species with functionally contrasting strategies can still co-occur locally, even under prevailing environmental filtering. Interactions between sources of environmental stress should be therefore included in global trait-based studies, as this will help to further anticipate where the effects of environmental filtering will impact plant trait diversity under climate change.

Functional trait diversity maximizes ecosystem multifunctionality

Understanding the relationship between biodiversity and ecosystem functioning has been a core ecological research topic over the last decades. Although a key hypothesis is that the diversity of functional traits determines ecosystem functioning, we do not know how much trait diversity is needed to maintain multiple ecosystem functions simultaneously (multifunctionality). Here, we uncovered a scaling relationship between the abundance distribution of two key plant functional traits (specific leaf area, maximum plant height) and multifunctionality in 124 dryland plant communities spread over all continents except Antarctica. For each trait, we found a strong empirical relationship between the skewness and the kurtosis of the trait distributions that cannot be explained by chance. This relationship predicted a strikingly high trait diversity within dryland plant communities, which was associated with a local maximization of multifunctionality. Skewness and kurtosis had a much stronger impact on multifunctionality than other important multifunctionality drivers such as species richness and aridity. The scaling relationship identified here quantifies how much trait diversity is required to maximize multifunctionality locally. Trait distributions can be used to predict the functional consequences of biodiversity loss in terrestrial ecosystems.