Contrasting changes in taxonomic vs. functional diversity of tropical fish communities after habitat degradation

Urbanization leads to convergent succession and homogenization of phytoplankton functional traits in a subtropical watershed over 11 years

Urbanization can significantly drive biodiversity loss in river ecosystems, yet the underlying mechanisms require further study. Here, we used a trait-based approach to investigate temporal succession and variation in the dissimilarity of phytoplankton community functional traits along an urbanizing subtropical river over 11 years - during which time the downstream of catchment underwent rapid urbanization. Our results indicated that urbanization altered the interannual succession of phytoplankton. The phytoplankton communities in the rural region were mainly shaped by a specialist trade-off between extreme lotic strategies (single cell, high maximum growth rate and high silica demand) in river habitat, and extreme lentic strategies (colonial, toxin production and nitrogen fixation abilities) in reservoir habitat. Conversely, in the urban region, generalist strategies with intermediate trait combinations (moderate mobility and mixotrophic ability) dominated the communities in both river and reservoir habitats. Time-lag analysis of functional dissimilarity showed lower, or even no significant variations of functional beta diversity in the urban region. Further decomposition of functional beta diversity indicated a reduced rate of functional turnover in urban river compared with that in rural river and a decrease in functional nestedness in urban reservoir. Paired differences between river and reservoir in the urban region exhibited convergent succession by functional turnover. The convergent succession and homogenization in the urban region made the variation in phytoplankton functional structure more unpredictable in a random forest model, and diminished the relationship between functional dissimilarity and environmental factors compared to the rural region. Our study shows how urbanization shapes the phytoplankton functional structure and causes homogenization in functional trait composition. The insight gained enhance our ability to assess and predict the environmental impacts of urbanization on aquatic ecosystems.

Environmental pressures on Mekong fish: Insights from temporal functional diversity dynamics

The Mekong River faces increasing environmental threats. To understand fish community responses to these threats, we explored the links between functional diversity (FD) dynamics and environmental changes across four sites using trait-based methods and fish monitoring data for 347 species. We assessed functional richness (FRic) and divergence (FDiv) using standardized effect sizes to investigate the main assembly rules structuring fish communities and used generalized additive models to identify key environmental drivers. After dam construction, all four sites experienced significant changes in environmental conditions. Deterministic processes, particularly environmental filtering, dominated in structuring fish communities. The upstream Lao People's Democratic Republic site (LPB) influenced by deterministic and stochastic processes. The Cambodia sites in Stung Treng province (CST) and Tonle Sap (TLS) Lake primarily driven by deterministic process with a decline in FRic and FDiv. Conversely, the Viet Nam site (VCM) seemed primarily influenced by stochastic process with more subtle environmental effects, evidenced by an increase in FRic and FDiv over time. The upper sites (LPB, CST, and TLS) displayed a distinct seasonal pattern in FD indices, with values decreasing during the dry season and increasing during the wet season. Conversely, the lower site (VCM) exhibited the opposite. Water level emerged as the key driver across all sites, with temperature and total nitrogen as secondary drivers. Dam impacts and other anthropogenic factors not included in our analyses (e.g., unsustainable fishing and habitat degradation) probably contributed to the observed changes in FD at specific sites. These findings highlight potential strategies for conservation, offering national and regional practitioners an opportunity to develop and refine river management plans.

Multiple environmental factors drive the functional dimension of fish communities in the Central East China Sea

A study of fish functional diversity based on trait-environment relationships offers new insights into comprehending the community structure of fish within marine ecosystems. The East China Sea is one of the most productive marine regions in China, and its fish communities are facing multiple pressures, including environmental changes, human activities, and habitat degradation. This study aims to investigate the functional α- and β-diversity of fish in the region, identify the environmental factors driving these variations, and explore how fish functional traits respond to these factors, using fish survey data from the central part of the Sea in 2016 and 2020, three functional α-diversity indices (functional richness, functional evenness, and functional divergence) and three functional β-diversity indices (functional β-diversity, functional turnover, and functional nestedness) were determined, as well as their comparisons. Random forest models were adopted to explore the influence of environmental factors on fish functional diversity, and RLQ (a combined analysis of environmental variables table R, species occurrence table L, and functional traits table Q) combined with the fourth-corner method was used to detect correlations between fish functional traits and environmental factors. Compared with 2016, functional richness significantly decreased in 2020, whereas functional divergence significantly increased. Functional β-diversity and functional turnover showed an increasing tendency from 2016 to 2020, and functional turnover and functional nestedness exhibited similar contributions to functional β-diversity across both periods. Chlorophyll a and sea surface temperature were the most influential variables, positively to functional divergence, functional β-diversity, and functional turnover but negatively to functional richness. Traits benthic water column preference and sedentary preference were closely related to lower values of Chlorophyll a, sea surface temperature, and pH. Under the current dramatic environmental changes, sedentary and benthic species were likely to be more vulnerable to exterior disturbances, which highlighted the need to incorporate sedentary and benthic fish into coastal management and conservation strategies.

Continuity in morphological disparity in tropical reef fishes across evolutionary scales

Tropical reef fishes exhibit a large disparity of organismal morphologies contributing to their astonishing biodiversity. Morphological disparity, scaling from differences among individuals within populations to differences among species, is governed by ecological and evolutionary processes. Here, we examined the relationship between intra- and interspecific disparity in 1111 individuals from 17 tropical reef fish species, representing 10 families with different dispersal abilities, across four Indian Ocean regions. We compared intraspecific measurements with species-level measures from a database of 1061 reef fish species. Species with high morphological disparity among individuals from distinct regions are found to be nested in families that display a high disparity among their genera. We show an association between the morphological disparity at the intra- and interspecific levels for several morphological ratios such as the caudal peduncle elongation. We evaluated the link between morphological disparity and genetic diversity with species dispersal ability. A structural equation model indicates that dispersal ability correlates positively with species genetic diversity, which is associated with morphological disparity. Our results suggest that traits associated with dispersal may foster gene flow and morphological evolution. Future works combining genomic, morphological and environmental data across more species is necessary to generalize these findings to other regions.

Sulawesi stream fish communities depend on connectivity and habitat diversity

Streams provide an array of habitat niches that may act as environmental filters for fish communities. The tropical island of Sulawesi in Indonesia is located in the Wallacea, a region isolated by marine barriers from the Asian and Australian faunas. Primary freshwater fishes are naturally absent in the Wallacea, including Sulawesi's numerous coastal streams. Diadromous species are in contrast species-rich in the area. The knowledge available on stream fishes in the Wallacea is largely restricted to taxonomic work and studies targeting single species groups, whereas baseline data on fish ecology remain extremely scarce. Such data and a deeper understanding of stream fish ecology are, however, urgently required for purposes such as informed management. We assumed that the stream fish assemblages are dominated by recruitment from the sea and are structured by macro- and microhabitat diversity. To test this hypothesis, we quantified the occurrence of individual fishes by point abundance electrofishing at 33 streams across Sulawesi. The 4632 fishes obtained represent 58 species out of 24 families. The native fishes recorded are mainly amphidromous (34 species), euryhaline (five species), and catadromous (five species). Gobiiformes make up the vast majority of records, dominated by Oxudercidae (22 species) and Eleotridae (five species). Only two of the species recorded are endemic to Sulawesi, including a single species strictly confined to freshwaters. Ten species, making up 6% of the fishes caught, are not native to Sulawesi. The outlying mean index (OMI) and BIOENV analyses suggest that effects on the scale of macro- and microhabitat shape fish assemblage composition, ranging from pH, conductivity, and temperature to current velocity, substrate, canopy cover, and elevation. Habitat niche use of species along the first two OMI axes is complementary and fine-scaled, covering a wide range of the available habitat space. Juvenile and adult conspecifics share similar habitat niches in most of the cases. Niche breadths overlap, but niche specialization is significant in most of the species. Non-native fishes link into the assemblages at the margins of habitat space, with substantial niche overlaps to native species. The present findings show that the native fish communities in coastal streams of Sulawesi are largely composed of species depending on access to the sea, highlighting the importance of connectivity down to the estuaries and sea. The ichthyofauna shows a rich diversity in habitat use, and the availability of alternative habitats along the altitudinal gradient provides plausible filters for species establishment. Non-native fishes are locally abundant, pose substantial potential for changing communities, but are still stocked intentionally. We stress the need for incorporating the need for connectivity and maintained habitat quality into management decisions, and a critical evaluation of stocking activities.

Functional trait analysis reveals the hidden stability of multitrophic communities

Although important for understanding how ecosystems will fare with increasing global change, the relationship between diversity and stability in multitrophic communities is still debated. Our best understanding comes from work within competitive guilds, where the relationship between stability and functional diversity is generally positive and also more direct and mechanistic than the relationship with species diversity. To expand our understanding, there is a need to examine empirically how functional trait identity relates to spatial and temporal stability within multitrophic communities relative to species identity. Here, we measured 13 functional traits of six coastal pond fish communities to examine temporal and spatial community stability through the lenses of functional trait diversity and species diversity. We found that solely considering species composition may underestimate stability. Additionally, we found spatial convergence and temporal divergence in species and trait variability, and we link this variation to processes of deterministic community assembly. Lastly, we found that correlations of species with key functional traits allow us to make inferences about how the trophic position of species relates to trait stability. Inferring community processes and making conservation decisions from species or trophic groups based on functional trait knowledge may be a viable strategy when resources are limited.

Modelling the alpha and beta diversity of copepods across tropical and subtropical Atlantic ecoregions

Copepods, the most abundant individuals of the mesozooplankton, play a pivotal role in marine food webs and carbon cycling. However, few studies have focused on their diversity and the environmental factors influencing it. The objective of the present study is to model the alpha and beta diversity of copepods across the tropical and subtropical ecoregions of Atlantic Ocean using both taxonomic and functional approaches. The study used a dataset of 226 copepod species collected by stratified plankton hauls (0-800 m depth) across the tropical and equatorial Atlantic, from oligotrophic waters close to the Brazilian coast to more productive waters close to the Mauritanian Upwelling. To perform the functional analysis, six traits related to the behaviour, growth, and reproduction of copepods were selected. Several alpha diversities were estimated using taxonomic metrics (SR, Δ+, and Λ+) and functional metrics (FDis, FEve, FDiv, FOri, FSpe), and modelized with GAM model across spatial and environmental gradients, and day/night. The overall and two components of β-diversity (turnover and nestedness) were shared between depth and stations. The surface layers of stations from oligotrophic, equatorial, and Cape Verde ecoregions displayed higher values of taxonomic α-diversity. More unpredictable were the facets of functional α-diversity, although they showed a tendency to be positive with depth during the daytime. The GAM analysis revealed spatial gradients as the key factors modelling the taxonomic α-diversity, whereas depth was the most relevant for functional α-diversity. The turnover component drove taxonomic β-diversity in depth and station, whereas the nestedness component acquired relevance for the functional β-diversity. The taxonomic structure of the copepod community varied spatially across depths and ecoregions, but this was not linked to functional changes of the same magnitude.

Use of a broad β-diversity for bioassessment of salinity stress on community homogeneity in marine environments

To determine the feasibility of β-diversity measures to evaluate the impact of salinity stress on community homogeneity in marine environments, a 1-month bioassay was conducted using the protozoan assemblage as the test community. The test samples were collected using the slide method in coastal waters of the Yellow Sea, northern China. Five treatments were designed according to a salinity gradient of 9, 19, 29, 39, and 49 PSU. The homogeneity of the test community showed significant variability in both composition and abundance patterns among five treatments. The multivariate dispersion measure on compositional data was linearly associated with the salinity stress compared to those on abundance alone or in combination with occurrence. The traditional β-diversity index represented a different behavior from that of the multivariate dispersion measures. These findings suggest that the composition-based multivariate dispersion may be a useful tool to evaluate the global salinity stress on community homogeneity in marine ecosystems.

Variation in mangrove species diversity across gradients of climate-change-induced environmental conditions and hydrological restoration

Increasing drought, elevated temperatures, and salinization are significant challenges to reestablishing species in mangrove restoration areas. In this study, we assessed how the diversity of two key mangrove faunal groups, molluscs and brachyuran crustaceans (hereafter referred to as crabs), varies across a gradient of disturbed, restored, and natural (undisturbed) mangroves. We also explored what are the environmental factors driving these variations in ten sites across the southern Gulf of Mexico, one of the global regions with the largest mangrove coverage. A total of 15 species were recorded (10 mollusks and 5 crabs), with higher abundance in natural (612 individuals) than in restored (554 individuals) or degraded (98 individuals) sites. Community structure analyses revealed that certain species were restricted to specific restoration conditions. For example, the crab Minuca vocator was found only in restored sites, while the mollusc Vitta virginea was exclusive to natural sites. In contrast, species like the crab Minuca rapax were present across all site types. Salinity emerged as the primary environmental factor influencing community structure, with disturbed sites exhibiting significantly higher salinity levels than restored and natural sites. All sites were classified as hypersaline, presenting challenges for species that cannot tolerate such conditions. This study provides a valuable baseline for understanding the ecological conditions that influence on the success of mangrove restoration, offering insights on the effects of environmental factors driving species diversity in this ecosystem.

Effects of Yellow Sea Warm Current on zooplankton community composition and functional groups in winter

The Yellow Sea Warm Current (YSWC) constitutes a significant hydrological feature in the Yellow Sea, particularly prominent during winter, facilitating the transport of warm, saline waters and warm-water species from the open sea to the Bohai and Yellow Seas. The YSWC induces alterations in the community structure and function of zooplankton. However, the effects of the YSWC on the functional trait compositions and functional groups of zooplankton remain unclear. This study aimed to elucidate the influence of the YSWC on the community structure, functional trait composition, and functional groups of zooplankton during winter of 2016. The YSWC significantly impacted the zooplankton assemblage in the central Yellow Sea (CYSA), resulting in notable distinctions from the Shandong coastal assemblage (SCA) and Jiangsu coastal assemblage (JCA). Compared to the SCA and JCA (comprising 45 and 34 taxa, with abundances of 119.4 ± 114.6 ind·m-3 and 82.8 ± 62.1 ind·m-3, respectively), the CYSA exhibited higher species richness and abundance (with 51 taxa and 144.4 ± 103.4 ind·m-3, respectively). This study documented a total of 11 warm-water species, showing a decreasing trend in both species richness and abundance from south to north. The CYSA was characterized by the predominance of medium‒sized, current‒feeding, omnivorous‒herbivorous broadcast spawners, whereas the SCA and the JCA were predominantly dominated by giant‒sized, ambush‒feeding carnivores. The Qingdao-Shidao anticyclonic eddy in the southern of Shandong Province led to a significant increase in the abundance of zooplankton, potentially impacting Yellow Sea fishery resource. This research contributed to a deeper understanding of how YSWC influence the zooplankton community and offered fresh insights into the effects of YSWC on zooplankton function traits and functional groups.

Unveiling Arthropod Responses to Climate Change: A Functional Trait Analysis in Intensive Pastures

This study investigates the impact of elevated temperatures on arthropod communities in intensively managed pastures on the volcanic island of Terceira, Azores (Portugal), using a functional trait approach. Open Top Chambers (OTCs) were employed to simulate increased temperatures, and the functional traits of ground dwelling arthropods were analyzed along a small elevation gradient (180-400 m) during winter and summer. Key findings include lower abundances of herbivores, coprophagous organisms, detritivores, and fungivores at high elevations in summer, with predators showing a peak at middle elevations. Larger-bodied arthropods were more prevalent at higher elevations during winter, while beetles exhibited distinct ecological traits, with larger species peaking at middle elevations. The OTCs significantly affected the arthropod communities, increasing the abundance of herbivores, predators, coprophagous organisms, and fungivores during winter by alleviating environmental stressors. Notably, iridescent beetles decreased with elevation and were more common inside OTCs at lower elevations, suggesting a thermoregulatory advantage. The study underscores the importance of considering functional traits in assessing the impacts of climate change on arthropod communities and highlights the complex, species-specific nature of their responses to environmental changes.

Prioritizing the multifaceted community and species uniqueness for the conservation of lacustrine fishes in the largest subtropical floodplain, China

Hydrological variations affect habitat characteristics and fish distribution in floodplain lakes. Assessing the contributions of the local community (i.e., LCBD, community uniqueness) and species to overall β diversity (i.e., SCBD, species uniqueness) of fish assemblages is valuable for habitat and species conservation planning, particularly from functional and phylogenetic perspectives. We examined the changes in multifaceted LCBD and SCBD of fish across different hydrological periods in the Poyang Lake, China, and analyzed their responsive mechanisms using regression models, based on which the conservation priorities of habitats and species were evaluated. The findings revealed that taxonomic, functional, and phylogenetic LCBD and SCBD were lowest during the wet season compared to the normal and dry seasons, emphasizing the regulatory effects of hydrological regimes on fish assemblages. Taxonomic and functional LCBD were significantly impacted by the mean abundance of migratory fish, highlighting the importance of specific species combinations on community uniqueness. Taxonomic and functional SCBD exhibited positive correlations primarily with mean abundance, suggesting the potential uniqueness of certain common species. Additionally, we identified the river-lake junction (Hukou station) and natural reserve (Xingzi and Nanjishan stations) with high overall community uniqueness as critical habitats. We also emphasized the necessity for increased conservation efforts for species having high overall species uniqueness during different hydrological periods, including Coilia brachygnathus, Ctenopharyngodon idella, Coilia nasus, Saurogobio dabryi, Hypophthalmichthys molitrix, Megalobrama amblycephala, and Parabramis pekinensis. This research underscores the significance of integrating multiple ecological perspectives to manage biodiversity changes and maintain ecological conservation values effectively.

Tree of life metabarcoding can serve as a biotic benchmark for shifting baselines in urbanized estuaries

Urbanization of estuaries drastically changed existing shorelines and bathymetric contours, in turn modifying habitat for marine foundational species that host critical biodiversity. And yet we lack approaches to characterize a significant fraction of the biota that inhabit these ecosystems on time scales that align with rates of urbanization. Environmental DNA (or eDNA) metabarcoding that combines multiple assays targeting a broad range of taxonomic groups can provide a solution, but we need to determine whether the biological communities it detects ally with different habitats in these changing aquatic environments. In this study, we tested whether tree of life metabarcoding (ToL-metabarcoding) data extracted from filtered seawater samples correlated with four known geomorphic habitat zones across a heavily urbanized estuary (Sydney Harbour, Australia). Using this method, we substantially expanded our knowledge on the composition and spatial distribution of marine biodiversity across the tree of life in Sydney Harbour, particularly for organisms where existing records are sparse. Excluding terrestrial DNA inputs, we identified significant effects of both distance from the mouth of Sydney Harbour and geomorphic zone on biological community structure in the ToL-metabarcoding dataset (entire community), as well as in each of the taxonomic subgroups that we considered (fish, macroinvertebrates, algae and aquatic plants, bacteria). This effect appeared to be driven by taxa as a collective versus a few individual taxa, with each taxon explaining no more than 0.62% of the variation between geomorphic zones. Similarly, taxonomic richness was significantly higher within geomorphic zones with large sample sizes, but also decreased by 1% with each additional kilometer from the estuary mouth, a result consistent with a reduction in tidal inputs and available habitat in upper catchments. Based on these results, we suggest that ToL-metabarcoding can be used to benchmark biological monitoring in other urbanized estuaries globally, and in Sydney Harbour at future time points based on detection of bioindicators across the tree of life. We also suggest that robust biotic snapshots can be archived following extensive curation of taxonomic assignments that incorporates ecological affinities, supported by records from relevant and regional biodiversity repositories.

Functional reorganization of North American wintering avifauna

Wintering birds serve as vital climate sentinels, yet they are often overlooked in studies of avian diversity change. Here, we provide a continental-scale characterization of change in multifaceted wintering avifauna and examine the effects of climate change on these dynamics. We reveal a strong functional reorganization of wintering bird communities marked by a north-south gradient in functional diversity change, along with a superimposed mild east-west gradient in trait composition change. Assemblages in the northern United States saw contractions of the functional space and increases in functional evenness and originality, while the southern United States saw smaller contractions of the functional space and stasis in evenness and originality. Shifts in functional diversity were underlined by significant reshuffling in trait composition, particularly pronounced in the western and northern United States. Finally, we find strong contributions of climate change to this functional reorganization, underscoring the importance of wintering birds in tracking climate change impacts on biodiversity.

Multiple habitats drive the functional diversity of fish assemblages in a tropical estuary

Understanding estuarine diversity patterns is crucial to highlight the ecological value of coastal ecosystems for fish assemblages. To increase our knowledge, we investigated the functional diversity of fish assemblages in five estuarine habitats (sandy beaches, mudflats, seagrass meadows, mangrove fringes, and estuarine riparian vegetation) in a tropical estuary of Brazil. Functional diversity metrics were assessed considering seven fish functional traits and calculated using functional indices, PCoA (functional spaces), and community-weighted mean (CWM). Then, a unified RLQ and fourth-corner analysis were used to evaluate environment-trait relationships. A total of 27,036 individuals of 119 species were recorded in all habitats. Functional diversity showed similar trends to estuarine habitats, which were more driven by the spatial configuration rather than by their structure, emphasizing the importance of environmental heterogeneity. There was a greater occupation of functional space to habitats located in the lower estuary compared to the upper estuary. Furthermore, body shapes and trophic guilds were the most common traits related to changes in functional diversity between habitats. The RLQ analysis revealed differences in trait composition between habitats influenced by salinity and transparency, although the fourth corner method did not show a significant relationship between fish functional traits and environmental variables. Our results suggest that the mosaic of habitats support the high functional diversity of fishes in tropical estuaries.

Interdecadal changes in ichthyofauna in a tropical bay with high anthropogenic influences: functional stability despite turnover predominance

Functional characteristics of species are of great importance for understanding their roles in ecosystems and can be used to detect long-term chances in the environment. We evaluated temporal changes (1983-1985 and 2017-2019) in taxonomic and functional indices of the fish fauna in shallow areas of a tropical bay heavily impacted by anthropogenic activities in recent decades. The hypothesis that functional indices change over time as a result of environmental degradation was tested. Our results showed a significant decrease in species richness and abundance over time, and in functional richness, while others functional diversity indices (divergency, evenness, and originality) remained stable. Thirteen functional groups were detected, some of which contained only one species, raising concerns about the loss of ecosystem functions due to ongoing changes. We also observed an increase in beta diversity over time, which may be the result of a decrease in local richness without leading to regional extinctions. Turnover was the most important process in structuring the fish fauna at the evaluated time scale. The relative stability of the functional structure and the higher levels of turnover seem to be related to the dominance of functional groups, within which species replace each other according to their responses to environmental filters that select for specific functional traits. Incorporating functional diversity indices and beta diversity variations in the fish community helped to enhance the existing information about this coastal system by offering improved estimates of biological diversity through diverse approaches. The predominance of turnover identified in the preset study suggests a dynamic and fluctuating species composition within the habitat. In this sense, habitat preservation should prioritize the protection of diverse habitats to accommodate a broad spectrum of species.

Morphological diversity increases with decreasing resources along a zooplankton time series

Biodiversity is studied notably because of its reciprocal relationship with ecosystem functions such as production. Diversity is traditionally described from a taxonomic, genetic or functional point of view but the diversity in organism morphology is seldom explicitly considered, except for body size. We describe morphological diversity of marine zooplankton seasonally and over 12 years using quantitative imaging of weekly plankton samples, in the northwestern Mediterranean Sea. We extract 45 morphological features on greater than 800 000 individuals, which we summarize into four main morphological traits (size, transparency, circularity and shape complexity). In this morphological space, we define objective morphological groups and, from those, compute morphological diversity indices (richness, evenness and divergence) using metrics originally defined for functional diversity. On both time scales, morphological diversity increased when nutritive resources and plankton concentrations were low, thus matching the theoretical reciprocal relationship. Over the long term at least, this diversity increase was not fully attributable to taxonomic diversity changes. The decline in the most common plankton forms and the increase in morphological variance and in extreme morphologies suggest a mechanism akin to specialization under low production, with likely consequences for trophic structure and carbon flux.

Classification and distribution of functional groups of birds and mammals in Mexico

There has been a recent exponential growth in the study of functional trait ecology. Nonetheless, the study of functional traits and functional groups has been limited for terrestrial vertebrates. We conducted a classification update of functional groups (FG) of birds and mammals in Mexico, and determined the distribution patterns of FG species richness in different ecosystems nationwide. We selected six functional traits (feeding habit, locomotion, feeding substrate and technique, activity period, seasonality, and body size) obtained for 987 and 496 species of birds and mammals, respectively. A cophenetic correlation analyses resulted in values of 0.82 for the bird species dendrogram, and 0.79 for the mammal species dendrogram showing that the structures adequately reflected the similarity between observations. We obtained 52 FG for birds, assembled into 9 broader groups based on their feeding habits (16 invertivores, 6 carnivores: 5 herbivores, 9 aquatic vertivore/invertivore, 5 granivores, 1 scavenger, 3 nectarivores, 4 frugivores, and 3 omnivores). We obtained 35 FG for mammals, assembled into 9 broader groups based on their feeding habits (4 granivores, 10 herbivores, 1 nectarivore, 4 frugivores, 8 invertivores, 3 omnivores, 2 aquatic vertivore/invertivore, 1 hematophagous, and 2 carnivores). Overall, the distribution of FG species richness for birds and mammals gradually increased from the Nearctic to the Neotropical region, following a typical latitudinal species richness pattern. Few FG of migratory birds, and FG of granivore and herbivore mammals showed more species in the Nearctic and in the transitional regions. Our study provides a baseline for identifying ecological functions of species of birds and mammals in different ecosystems in Mexico, and contributes to understand the relationship between species diversity, community structure and ecosystem functioning. Identifying spatial patterns of functional trait diversity is important as biodiversity loss has a negative impact on ecosystem functioning and provision of environmental services.

The response of ecosystem vulnerability to climate change and human activities in the Poyang lake city group, China

Ecosystem vulnerability is an ecological response of the environment to external damage. Studying the influencing factors and spatiotemporal changes of ecosystem vulnerability is helpful to maintain ecological balance. At present, studies on ecosystem vulnerability are relatively homogeneous and rarely integrate climate change and human activities. Based on a habitat-function framework, this study analyzed the response of ecosystem vulnerability on climate change and human activities in the Poyang Lake City Group (PLCG) in 2010, 2015 and 2020. The spatial agglomeration of ecosystem vulnerability has been analyzed by using GeoDa model. The interaction of factors on ecosystem vulnerability have been analyzed by using geographical detector. It can be seen that the ecosystem vulnerability of the PLCG have increased from 2010 to 2020. The impacts of climate change to the ecosystem vulnerability have showed a positive correlation. Meanwhile, the key factors leading to the change of ecological vulnerability are still human activities. This methodology demonstrates a high level of robustness when applied to other research domains. This research is conducive to maintaining the integrity of the ecosystem, realizing the development of man and nature, and promoting the sound and rapid development of economic society.

Submarine outfall effect on subtidal macrobenthic communities in a southwestern Atlantic coastal city

Submarine outfalls are an effective alternative for the final discharge of wastewater. The aim was to evaluate the subtidal macrobenthic community's responses and the changes in bottom sedimentary dynamics due to submarine outfall (SO) location. Sampling stages were: before SO (B_SO), after SO (A_SO) and after treatment plant (A_EDAR). Sampling sites were determined at different distances from the coastline (coastal, oceanic, and reference) on both sides of the pipe (North and South). Species shifts (from tolerant to sensitive) were observed along with a decrease in organic matter in the A_EDAR Stage. There were changes in the sedimentary dynamic with sediment accumulation on the South side of the SO (finest sediments) and erosion on the North side (coarsest sediments) in the A_SO and A_EDAR Stages. Species turnover was higher than nesting in all stages. Functional trait analysis allowed the identification of temporal variations in benthic communities. The body size, development mode, feeding mode, habit, adult mobility and tolerance to pollution were useful functional traits to detect changes through Stages (B_SO, A_SO, and A_EDAR). Biotic indices classified the sites as slightly disturbed, indicating a slight improvement in the A_EDAR Stage.

Taxonomical and functional diversity dynamics of conspicuous echinoderms in the northeastern tropical Pacific over a decade

Understanding what determines spatio-temporal changes in echinoderm assemblages from an integrative perspective that considers biodiversity, species evenness, and species' niches could permit superior community-scale characterizations of habitat resilience to disturbance. Such an approach was taken herein by tracking a Central Mexican Pacific echinoderm assemblage between 2012 and 2021, and higher richness, diversity, evenness, and functional entity counts were associated with more heterogeneous benthic assemblages. Echinoderm taxonomic composition was influenced by ENSO events, with higher functional diversity found during La Niña events. Conservation strategies should focus on species with unique functional traits to maintain the balance of coral community functionality.

Taxonomic and functional structure of macrobenthic invertebrate communities and their response to environmental variables along the subbranches of the Nile River (rayahs), Egypt

Macrobenthic invertebrate communities serve as markers of anthropogenic stress in freshwater ecosystems. In this study, 17 sampling sites were selected from two Nile river subbranches (El-Rayah El-Behery and El-Rayah El-Nassery) and subjected to different anthropogenic influences to explore the ecological environment and characteristics of macrobenthos communities. Macrobenthos were studied using taxonomic diversity and biological trait analysis to investigate how human activity and variation in water quality affect their structure and function. A total of 37 taxa represented by 43,389 individuals were recognized. The communities are composed chiefly of Oligochaeta and aquatic insects. Multivariate statistical analyses found that the most influential environmental variables in the structural and functional community were sodium, dissolved oxygen, silicate, pH, calcium, and cadmium. At high levels of pollution, notably sewage and industrial pollution in the northern part of El-Rayah El-Behery, characteristics such as larger body size, detritus feeders, burrowers, and high tolerance to pollution predominated, whereas at low levels of pollution, features such as small body sizes, scraper and predator feeders, intolerant and fairly tolerant of pollution, and climber and swimmer mobility are predominant. The results confirm our prediction that the distribution of macroinvertebrate traits varies spatially in response to environmental changes. The diversity-based method distinguished impacted sewage and industrial sites from thermal effluent sites, while the trait-based approach illustrated an apparent variance between the ecological status of contaminated regions. Therefore, the biological features should be employed in addition to structural aspects for assessing the biodiversity of macroinvertebrate communities under environmental stressors.

Decoupled spatiotemporal patterns of avian taxonomic and functional diversity

Each year, seasonal bird migration leads to an immense redistribution of species occurrence and abundances,^1,2,3 with pervasive, though unclear, consequences for patterns of multi-faceted avian diversity. Here, we uncover stark disparities in spatiotemporal variation between avian taxonomic diversity (TD) and functional diversity (FD) across the continental US. We show that the seasonality of species richness expectedly³ follows a latitudinal gradient, whereas seasonality of FD instead manifests a distinct east-west gradient. In the eastern US, the temporal patterns of TD and FD are diametrically opposed. In winter, functional richness is highest despite seasonal species loss, and the remaining most abundant species are amassed in fewer regions of the functional space relative to the rest of the year, likely reflecting decreased resource availability. In contrast, temporal signatures for TD and FD are more congruent in the western US. There, both species and functional richness peak during the breeding season, and species' abundances are more regularly distributed and widely spread across the functional space than during winter. Our results suggest that migratory birds in the western US disproportionately contribute to avian FD by possessing more unique trait characteristics than resident birds,^4,5 while the primary contribution of migrants in the eastern US is through increasing the regularity of abundances within the functional space relative to the rest of the year. We anticipate that the uncovered complexity of spatiotemporal associations among measures of avian diversity will be the catalyst for adopting an explicitly temporal framework for multi-faceted biodiversity analysis.

Covariation of taxonomic and functional facets of β-diversity in Chilean freshwater fish assemblages: Implications for current and future processes of biotic homogenization

The biodiversity of assemblages that experience the introduction and extinction of species may lead to responses in two important facets: The taxonomic and functional diversity. The way in which these facets are associated may reveal important implications and consequences for the conservation of those assemblages. Considering the critical situation of freshwater fishes in continental Chile (30° - 56° S), we analyzed how the taxonomic (TDβ) and functional (FDβ) facets of β-diversity, and their components of turnover and nestedness, are associated. We evaluated changes in β-diversity (ΔTDβ and ΔFDβ), turnover (ΔTDtur and ΔFDtur), and nestedness (ΔTDnes and ΔFDnes) in 20 fish assemblages from their historical (pre-European) to current composition. We also simulated future trends of these changes, assuming that native species with conservation issues would become extinct. Our results show that the fish assemblages studied are in a process of loss of β-diversity, both in taxonomic and functional facets (ΔTDβ = -3.9%; ΔFDβ = -30.4%); also, that these facets are positively correlated in the assemblages studied (r = 0.617; P < 0.05). Both components showed by loss in nestedness (ΔTDnes = -36.9%; ΔFDnes = -60.9%) but gain in turnover (ΔTDtur = 9.2%; ΔFDtur = 12.3%). The functional β-diversity decreased more than the taxonomic (ΔFDβ > ΔTDβ), which was caused chiefly by six exotic species of Salmonidae, whose geographical spread was wider and that at the same time shared several morpho-functional traits. Our forecasts, assuming an intensification in the extinction of Endangered and Vulnerable native species, indicate that the process of homogenization will continue, though at a lower rate. Our study shows that the freshwater ichthyofauna of continental Chile is undergoing biotic homogenization, and that this process involves the facets of taxonomic and functional β-diversity, which are show high correlation between historical and current compositions. Both facets show that process is influenced by nestedness, and while turnover contributes to differentiation (both taxonomic and functional), its importance is overshadowed by nestedness.

Unraveling the importance of functionally extreme tadpole types to functional diversity: a case study in temperate montane streams

BACKGROUND

Functional diversity is important to maintain ecosystem functioning. Species with different ecomorphological traits may display distinct functional roles in ecosystems. Accordingly, functionally extreme species are more important as they can exhibit specific strategies. However, little is known about the distribution patterns of functionally extreme species at a local scale and whether the prior extinction of extreme species can cause significant effects on functional diversity. In addition, no empirical studies have been conducted on the microhabitat determinants of extreme species to maintain the functional diversity.

RESULTS

This study collected 1470 tadpoles belonging to 6 families and 20 anuran species. These species were subsequently divided into 65 functional entities based on their developmental stages to incorporate intraspecific traits variability. As a result, we detected seven extreme functional entities, accounting for 10.7% of the total number of entities. Moreover, the prior extinction of extreme entities can lead to a significant decrease in functional diversity compared with the random extinction of entities. Microhabitat variables such as conductivity, water depth, and current velocity determined the distribution of extreme entities.

CONCLUSION

Although the functionally extreme entities only represented a small proportion of the total number of tadpoles, they played irreplaceable roles in maintaining functional diversity. Their extinction may induce high functional vulnerability in tadpole communities. Therefore, anuran species with extreme tadpole traits need to be projected for amphibian conservation.

Elevated alpha diversity in disturbed sites obscures regional decline and homogenization of amphibian taxonomic, functional and phylogenetic diversity

Loss of natural habitat due to land-use change is one of the major threats to biodiversity worldwide. It not only affects the diversity of local species communities (alpha diversity) but can also lead to large-scale homogenization of community composition (reduced beta diversity) and loss of regional diversity (gamma diversity), but these effects are still rarely investigated. We assessed the impact of land-use change on taxonomic, functional and phylogenetic diversity of amphibians in Rwanda, both on the local (community-level) and regional scale (country-wide). Alpha diversity in local communities was higher in farmland than in natural habitats; however, species turnover among farmland sites was much lower than among natural sites, resulting in highly homogenized communities and reduced taxonomic, functional and phylogenetic gamma diversity in farmland across Rwanda. Amphibians found in farmland were mostly disturbance-tolerant species that are widespread in eastern Africa and beyond. In contrast, most of the regionally endemic frog species that make this region a continent-wide hotspot of amphibian diversity were found only in the natural habitats. Ongoing habitat conversion might result in further homogenization of amphibian communities across sub-Saharan Africa and the loss of regional endemism, unique evolutionary lineages, and multifunctionality.

Eutrophication induces functional homogenization and traits filtering in Chinese lacustrine fish communities

Rapid anthropogenic nutrient enrichment has caused widespread ecological problems in aquatic ecosystems and the resulting eutrophication has dramatically changed fish communities throughout the world. However, few studies addressed how fish communities responded to eutrophication in terms of multidimensional functional and taxonomic structure, especially how eutrophication acted as an environment filter on functional traits. The aim of the present study was to investigate the effects of eutrophication on fish species composition, community metrics and species functional traits in 26 shallow lakes from the middle reaches of Yangtze River basin, China. This study validated that eutrophication is an important factor shaping the fish community structure. Regression analyses showed that eutrophication favored higher total biomass and lower functional diversity of fish communities but had little effect on species richness. Despite the fact that some pelagic zooplanktivorous species were more abundant in the most eutrophic lakes, multivariate analyses of the relationships between species traits and environmental variables revealed weak relationships between feeding traits and eutrophication. In contrast, species with a benthic life stage were negatively associated with eutrophication while those with a large body size and high absolute fecundity showed the opposite trend. Due to demersal habitat degradation, and to a lesser degree, to changes in trophic resources availability, eutrophication caused functional simplification of fish communities by increasing functional traits homogeneity among the most tolerant species. Some relationships between functional traits and eutrophication well established in the western palearctic have not been observed in this study, emphasizing the importance of biases resulting from specific evolutionary histories. This work will provide useful insights on on-going restoration and management of shallow lakes in the Yangtze River basin.

Functional and phylogenetic relationships link predators to plant diversity via trophic and non-trophic pathways

Human-induced biodiversity loss negatively affects ecosystem function, but the interactive effects of biodiversity change across trophic levels remain insufficiently understood. We sampled arboreal spiders and lepidopteran larvae across seasons in 2 years in a subtropical tree diversity experiment, and then disentangled the links between tree diversity and arthropod predator diversity by deconstructing the pathways among multiple components of diversity (taxonomic, phylogenetic and functional) with structural equation models. We found that herbivores were major mediators of plant species richness effects on abundance, species richness, functional and phylogenetic diversity of predators, while phylogenetic, functional and structural diversity of trees were also important mediators of this process. However, the strength and direction differed between functional, structural and phylogenetic diversity effects, indicating different underlying mechanisms for predator community assembly. Abundance and multiple diversity components of predators were consistently affected by tree functional diversity, indicating that the variation in structure and environment caused by plant functional composition might play key roles in predator community assembly. Our study highlights the importance of an integrated approach based on multiple biodiversity components in understanding the consequences of biodiversity loss in multitrophic communities.

Taxonomic and Functional Diversity of Benthic Macroinvertebrate Assemblages in Reservoirs of South Korea

Numerous community indices have been developed to quantify the various aspects of communities. However, indices including functional aspects have been less focused on. Here, we examined how community composition varies in response to the environment and discovered the relationship between taxonomic diversity and functional diversity while considering the environment. Macroinvertebrate communities were collected from 20 reservoirs in South Korea. To characterize functional diversity, functional traits in four categories were considered: generation per year, adult lifespan, adult size, and functional feeding groups. Based on their community composition, we classified the reservoirs using hierarchical cluster analysis. Physicochemical and land use variables varied considerably between clusters. Non-metric multidimensional scaling indicated differences between reservoirs and clusters in terms of structure, functional diversity, and environmental variables. A self-organizing map was used to categorize functional traits, and network association analysis was used to unravel relationships between functional traits. Our results support the characteristics of species' survival strategies such as r- and K-selection. Functional richness exhibited a relationship with taxonomic diversity. Our findings suggest that different types of diversity could play complementary roles in identifying biodiversity. Our findings should prove useful in developing new criteria for assessing freshwater ecosystem health, as well as in evaluating and predicting future alteration of benthic macroinvertebrate communities facing anthropogenic disturbances.

A comprehensive analysis of all known fishes from Sydney Harbour

Fishes represent an important natural resource and yet their diversity and function in dynamic estuaries with relatively high levels of human pressure such as Sydney Harbour have rarely been quantified. Further, Eastern Australia supports the survival and persistence of an increasing number of tropical species found within temperate estuaries owing to increasing average ocean temperatures. A re-valuation of the number of fish species known from Sydney Harbour is therefore needed. In this study, we generated an up-to-date and annotated checklist of fishes recorded from Sydney Harbour based on verified natural history records as well as newly available citizen science records based on opportunistic observations and structured surveys. We explored the spatial and temporal distribution of these records. In addition, we quantified the function, conservation status, and commercial importance of the identified fishes. The number of fish species recorded from Sydney Harbour now stands at 675, an increase of 89 species (15 %) when compared to the most recent evaluation in 2013. We attribute this increase in fish diversity over a relatively short time to the contribution of newer citizen science programs as well as the influx and survival of fishes in the Harbour with preferences for warmer waters. Some fish families were also overrepresented in the more urbanized and polluted sections of the Harbour. In forecasting further environmental impacts on the fishes of Sydney Harbour, we recommend increased integration of collaborative citizen science programs and natural history collections as a means to track these changes.

Effects of nitrofurazone on ecosystem function in marine environments: A case study on microbial fauna

To evaluate the effects of nitrofurazone on functional processes in marine ecosystems, periphytic protozoan communities were exposed to different concentrations of the antibiotic for a 10-day duration. Species trait distributions in the tested communities were observed during exposure to five concentrations of nitrofurazone. A fuzzy coding system with seven traits and seventeen categories was used to summarize the changes in functional patterns of the test organisms. Nitrofurazone had a significant influence on the function process of the periphytic ciliate communities. Bacterivores with flattened bodies were sensitive to the toxicant whereas sessile and cylindrical raptors showed a high tolerance to nitrofurazone, invariably dominating communities exposed to high concentrations. Bootstrapped-average analysis demonstrated a significant change in functional patterns at highest nitrofurazone concentrations (8 mg l^-1). Based on these findings, it is suggested that nitrofurazone may negatively influence ecosystem function in marine environments.

Recommendations to enhance breeding bird diversity in managed plantation forests determined using LiDAR

Widespread afforestation is a crucial component of climate mitigation strategies worldwide. This presents a significant opportunity for biodiversity conservation if forests are appropriately managed. Within forests, structural and habitat diversity are known to be critical for biodiversity but pragmatic management recommendations are lacking. We make a comprehensive assessment of the effects of habitat variables on bird populations using data from over 4000 ha of forested landscape. We combine high-resolution remote sensing data with comprehensive management databases to classify habitat attributes and measure the response of six taxonomic and functional diversity metrics: species richness, Shannon diversity, functional richness, functional evenness, functional divergence, and functional dispersion. We use a novel approach that combines hierarchical partitioning analysis with linear models to determine the relative importance of different habitat variables for each bird diversity metric. The age class of forest stands was consistently the most important variable across all bird diversity metrics, outperforming other structural measures such as horizontal and vertical heterogeneity and canopy density. Shrub density and gap fraction were each significantly associated with one bird diversity metric. In contrast, variables describing within-stand structural heterogeneity (vertical and horizontal) were generally less important while tree species identity (e.g., conifer or broadleaved) was not significant for any bird diversity metric. Each of the six bird diversity metrics had different patterns of independent variable importance and significance, emphasizing the need to consider multiple diversity metrics in biodiversity assessments. Similarly, the optimal resolution for remote sensing metrics varied between structural variables and bird diversity metrics, suggesting that the use of remote sensing data in biodiversity studies could be greatly improved by first exploring different resolutions and data aggregations. Based on the results from this comprehensive study, we recommend that managers focus on creating habitat diversity at the between-, rather than exclusively within-stand scale, such as by creating a matrix of different age classes, to maximize bird diversity. This recommendation for forest managers is powerful yet pragmatic in its simplicity.

Fish community diversity in a coastal zone at southeastern Gulf of California, Mexico

Although the southeast region of the Gulf of California has a high fish diversity, due to the high biological productivity, the coastal area of Nayarit has few studies in this regard. The main objective of this work is to describe the variability of the structure of the ichthyofauna in the coastal zone of Nayarit during an annual cycle. Biological samples were collected at 10 stations during February, May, July, and December 2014. The temperature, depth, salinity, and organic material and carbonates in sediments were also recorded. The analysis of diversity includes three facets: ecological, taxonomic, and functional. A total of 82 species belonging to 56 genera, 31 families, 11 orders, and two classes were identified. The most abundant species included Selene peruviana, Stellifer wintersteenorum, Cathorops sp., and Larimus argenteus. Of the total of identified species, 62% were considered as rare according to their abundance and frequency. Although the environmental variables analyzed were variable, all diversity indices did not reveal an evident spatio-seasonal pattern. Likewise, most values of average taxonomic distinctness presented the expected values. However, some values showed a low taxonomic diversity. The indices of functional diversity showed a stable functional richness and redundancy in the attributes of the species.

Potential propagation of agricultural pesticide exposure and effects to upstream sections in a biosphere reserve

In the last decades, several studies have shown that pesticides frequently occur above water quality thresholds in small streams draining arable land and are associated with changes in invertebrate communities. However, we know little about the potential propagation of pesticide effects from agricultural stream sections to least impacted stream sections that can serve as refuge areas. We sampled invertebrates and pesticides along six small streams in south-west Germany. In each stream, the sampling was conducted at an agricultural site, at an upstream forest site (later considered as "refuge"), and at a transition zone between forest and agriculture (later considered as "edge"). Pesticide exposure was higher and the proportion of pesticide-sensitive species (SPEAR_pesticides) was lower in agricultural sites compared to edge and refuge sites. Notwithstanding, at some edge and refuge sites, which were considered as being least impacted, we estimated unexpected pesticide toxicity (sum toxic units) exceeding thresholds at which field studies suggested adverse effects on freshwater invertebrates. We conclude that organisms in forest sections within a few kilometres upstream of agricultural areas can be exposed to ecologically relevant pesticide levels. In addition, although not statistically significant, the abundance of pesticide-sensitive taxa was slightly lower in edge compared to refuge sites, indicating a potential influence of adjacent agriculture. Future studies should further investigate the influence of spatial relationships, such as the distance between refuge and agriculture, for the propagation of pesticide effects and focus on the underlying mechanisms.

Structural diagnosis of benthic invertebrate communities in relation to salinity gradient in Baltic coastal lake ecosystems using biological trait analysis

This study is based on biological trait analysis (BTA), which provides a link between the distribution and biological characteristics of species. The paper investigates differences in the structure and functional diversity of benthic fauna in terms of seven biological traits (mobility, habitat, feeding type, habitat modification, body form, body size and feeding apparatus) in nine Baltic coastal lakes whose salinity ranged from 0.1 to 7.3 PSU. Mobile organisms were more common in lakes with higher salinity, while sessile and semi-mobile species preferred low-salinity or freshwater environments. There were also noticeable differences connected with feeding type: collectors and scrapers were more common in brackish lakes, and collectors were significantly dominant in freshwater and transitional ones. This indicates that Baltic coastal lakes are inhabited by similar species of benthic fauna, but that certain biological traits occur with different frequencies. We therefore identified features that may affect the functioning of coastal lakes with a relatively narrow salinity gradient (0.1–7.3 PSU). It seems to confirm the possibility of using BTA methods to determine key characteristics that are helpful for understanding the differences between aquatic ecosystems. The results may provide a basis for further research on changes in the functional diversity of lakes along the southern coast of the Baltic Sea, particularly in view of climate change, given their being small, shallow and less resilient lakes.

Dredging transforms the seafloor and enhances functional diversity in urban seascapes

Landscape modification alters the condition of ecosystems and the complexity of terrain, with consequences for animal assemblages and ecosystem functioning. In coastal seascapes, dredging is routine practice for extracting sediments and maintaining navigation channels worldwide. Dredging modifies processes and assemblages by favouring species with wide trophic niches, diverse habitat requirements and tolerances to dredge-related eutrophication and sedimentation. Dredging also transforms the three-dimensional features of the seafloor, but the functional consequences of these terrain changes remain unclear. We investigated the effects of terrain modification on the functional diversity of fish assemblages in natural and dredged estuaries to examine whether dredging programs could be optimised to minimise impacts on ecological functioning. Fish assemblages were surveyed with baited remote underwater video stations and variation in functional niche space was described using species traits to calculate metrics that index functional diversity. Terrain variation was quantified with nine complementary surface metrics including depth, aspect, curvature, slope and roughness extracted from sonar-derived bathymetry maps. Functional diversity was, surprisingly, higher in dredged estuaries, which supported more generalist species with wider functional niches, and from lower trophic levels, than natural estuaries. These positive effects of dredging on functional diversity were, however, spatially restricted and were linked to both the area and orientation of terrain modification. Functional diversity was highest in urban estuaries where dredged channels were small (i.e. <1% of the estuary), and where channel slopes were orientated towards the poles (i.e. 171-189°), promoting both terrain variation and light penetration in urban estuaries. Our findings highlight previously unrecognised functional consequences of terrain modification that can easily be incorporated into dredging programs. We demonstrate that restricting the spatial extent of dredging operations and the orientation of dredged channel slopes, wherever this is practical, could help to limit impacts on ecosystem functioning and productivity in urban seascapes.

Climate change linked to functional homogenization of a subtropical estuarine system

Climate change causes marine species to shift and expand their distributions, often leading to changes in species diversity. While increased biodiversity is often assumed to confer positive benefits on ecosystem functioning, many examples have shown that the relationship is specific to the ecosystem and function studied and is often driven by functional composition and diversity. In the northwestern Gulf of Mexico, tropical species expansion was shown to have increased estuarine fish and invertebrate diversity; however, it is not yet known how those increases have affected functional diversity. To address this knowledge gap, two metrics of functional diversity, functional richness (FRic) and functional dispersion (FDis), were estimated in each year for a 38‐year study period, for each of the eight major bays along the Texas coast. Then, the community‐weighted mean (CWM) trait values for each of the functional traits are calculated to assess how functional composition has changed through time. Finally, principal component analysis (PCA) was used to identify species contributing most to changing functional diversity. We found significant increases in log‐functional richness in both spring and fall, and significant decreases in functional dispersion in spring, suggesting that although new functional types are entering the bays, assemblages are becoming more dominated by similar functional types. Community‐weighted trait means showed significant increases in the relative abundance of traits associated with large, long‐lived, higher trophic level species, suggesting an increase in periodic and equilibrium life‐history strategists within the bays. PCA identified mainly native sciaenid species as contributing most to functional diversity trends although several tropical species also show increasing trends through time. We conclude that the climate‐driven species expansion in the northwestern Gulf of Mexico led to a decrease in functional dispersion due to increasing relative abundance of species with similar life‐history characteristics, and thus the communities have become more functionally homogeneous.

Hydrological Season Can Have Unexpectedly Insignificant Influences on the Elevational Patterns of Functional Diversity of Riverine Macroinvertebrates

Spatial biodiversity is a key issue in biogeography for the explorations of biological origin and diversification. However, seldom studies have addressed the temporal changes in spatial patterns of biodiversity. We explored the taxonomic and functional diversities of riverine macroinvertebrates in central China, with the elevational gradient, in different seasons in a normal climate year (i.e., no extreme anomalies in the annual precipitation or average annual temperature). The air temperature and streamflow discharge were decreased monotonically with the increase of elevation both in the dry and wet seasons. In addition, the total nitrogen had no significant change with the increase of elevational gradient in the dry season but showed a monotonically decreasing pattern in the wet season. The total phosphorus showed a monotonically decreasing pattern with the elevational gradient in the dry season but had no significant change in the wet season. The spatial pattern of taxonomic diversity of macroinvertebrates along the elevational gradient showed complex patterns, but the functional diversity had either the unimodal or monotonically decreasing pattern. In addition, the functional diversity with the elevational gradient had similar patterns between the dry and wet seasons. Further analysis of the elevational pattern in different seasons is an important basis for understanding the status quo of functional diversity and formulating countermeasures for biodiversity conservation.

Neustonic microplastics and zooplankton in coastal waters of Cabrera Marine Protected Area (Western Mediterranean Sea)

The high abundance of microplastics in marine environments is becoming a growing threat for Marine Protected Areas (MPAs). Recent studies have identified microplastics (MP) as having multiple effects on biota, and it is of special interest to highlight their effects on zooplanktonic organisms. These organisms play a key role on local food web structures and there is a need to better understand the accumulation of MPs and associated contaminants within the food web. The present study addresses MP distribution and composition within Cabrera MPA as well as its effects on local zooplanktonic community composition. Neustonic microplastic and zooplankton abundance and composition were determined in the shallow coastal waters of Cabrera MPA during the summer season of 2019. Samples were taken using a sea surface manta-net, with a mesh size of 335 μm. MPs were found in all manta trawl samples for a total of 7047 MP with an overall mean abundance (± SD) of 3.52 (± 8.81) items/m³, a value higher than those reported for the majority of Western Mediterranean Sea basins. Qualitative and semi-quantitative analyses of the local zooplankton community suggest that its composition could be sensitive to MP abundances. Although no correlation was found between overall mean abundance of MP and zooplankton, a positive correlation was found between MP abundance and the abundance of the planktonic stage of the foraminifer Rosalina globularis (Tretomphalus). This species seems to be able to use MP for its dispersion. On the other hand, a negative correlation between MP abundance and Copepoda abundance was detected. This work confirms that the coastal zooplankton community composition within the MPA of Cabrera are not exempt from MP pollution and suggests important and complex interactions between MP and zooplankton organisms in coastal waters.

Fish Composition and Diversity of Four Coral Reefs in the South China Sea Based on Hand-Line Catch

To improve the overall understanding of the fish diversity and spatial patterns of major coral reefs in the South China Sea, fish assemblage composition, dominant species, biodiversity indices, and multivariate analysis of community structure were reported for four major coral reefs based on hand-line survey data in May and September 2018. A total of five orders, 21 families, 45 genera and 121 species of fish were recorded with Perciformes (78.5%) being the most diverse. The highest number (5) of dominant species was found near Chenhang Island while the lowest (2) number was detected at Zhubi Reef. The highest abundance index (7.21) occurred at Zhubi Reef, while the Shannon–Wiener diversity (4.80), Pielou’s evenness (0.81), and Simpson’s dominance (0.95) indexes were all highest at Qiliangyu Island. Based on cluster analysis and non-metric multi-dimensional scaling (NMDS), fish communities varied more spatially than seasonally. Our results led us to hypothesize that the habitat complexity and level of anthropogenic disturbance were the main factors affecting the composition of reef-dwelling fish on each coral reef. Topography was likely responsible for most variation in the spatial pattern of fish diversity.

An approach to evaluating the acute toxicity of nitrofurazone on community functioning using protozoan periphytons

The acute toxicity of nitrofurazone on community functioning was studied using an acute toxicity test. Consequently, 14-day protozoan periphyton assemblages were used as test organism communities, under a range of nitrofurazone concentrations including 0 (control), 0.5, 3, 6, and 12 mg ml^-1 within 0, 2, 4, 6, 8, 10, and 12 h time duration. Fuzzy coding system of functional traits classified the test protozoan periphyton community into six major traits and 15 categories. Briefly, community-weighted means (CWM) were used to identify the community functioning of test protozoan assemblage. Inferences demonstrate a drastic/significant variation in the functional patterns of the test organisms at a high concentration (12 mg ml^-1) after an exposure time of 12 h, but the functional diversity indices leveled off at the exposure time of 10 h and then dropped sharply. These results suggested that nitrofurazone may significantly influence the community functioning in marine ecosystems.

Bird Functional Diversity in Agroecosystems and Secondary Forests of the Tropical Andes

Agricultural systems have increased in extension and intensity worldwide, altering vertebrate functional diversity, ecosystem functioning, and ecosystemic services. However, the effects of open monoculture crops on bird functional diversity remain little explored, particularly in highly biodiverse regions such as the tropical Andes. We aim to assess the functional diversity differences of bird guilds between monoculture crops (coffee, cocoa, and citrus) and secondary forests. We use four functional diversity indices (Rao Q, Functional Richness, Functional Evenness, and Functional Divergence) related to relevant morphological, life history, and behavioral traits. We find significant differences in functional diversity between agroecosystem and forest habitats. Particularly, bird functional diversity is quite homogeneous among crop types. Functional traits related to locomotion (body weight, wing-chord length, and tail length), nest type (closed), and foraging strata (canopy and understory) are dominant at the agroecosystems. The bird assemblages found at the agroecosystems are more homogeneous in terms of functional diversity than those found at the secondary forests, as a result of crop structure and management. We recommend promoting more diverse agroecosystems to enhance bird functional diversity and reduce their effects on biodiversity.

Phylogeny, body morphology, and trophic level shape intestinal traits in coral reef fishes

Trait-based approaches are increasingly used to study species assemblages and understand ecosystem functioning. The strength of these approaches lies in the appropriate choice of functional traits that relate to the functions of interest. However, trait-function relationships are often supported by weak empirical evidence.Processes related to digestion and nutrient assimilation are particularly challenging to integrate into trait-based approaches. In fishes, intestinal length is commonly used to describe these functions. Although there is broad consensus concerning the relationship between fish intestinal length and diet, evolutionary and environmental forces have shaped a diversity of intestinal morphologies that is not captured by length alone.Focusing on coral reef fishes, we investigate how evolutionary history and ecology shape intestinal morphology. Using a large dataset encompassing 142 species across 31 families collected in French Polynesia, we test how phylogeny, body morphology, and diet relate to three intestinal morphological traits: intestinal length, diameter, and surface area.We demonstrate that phylogeny, body morphology, and trophic level explain most of the interspecific variability in fish intestinal morphology. Despite the high degree of phylogenetic conservatism, taxonomically unrelated herbivorous fishes exhibit similar intestinal morphology due to adaptive convergent evolution. Furthermore, we show that stomachless, durophagous species have the widest intestines to compensate for the lack of a stomach and allow passage of relatively large undigested food particles.Rather than traditionally applied metrics of intestinal length, intestinal surface area may be the most appropriate trait to characterize intestinal morphology in functional studies.

Effects of dam construction and fish invasion on the species, functional and phylogenetic diversity of fish assemblages in the Yellow River Basin

An understanding of the consequences of human-mediated disturbances from multi-facet diversity (i.e. species, functional and phylogenetic) perspectives is of great significance in biodiversity assessment and conservation planning. Most previous studies have concentrated on anthropogenic effects on species diversity in the Yellow River Basin (YRB) in China, but information on anthropogenic effects on phylogenetic and functional facets is still pending. Here, we identified the temporal changes in species, functional, and phylogenetic alpha diversity of fish assemblages in 18 reaches (i.e. 15 mainstream reaches and 3 tributaries) of the YRB under the background of long-term cascade hydropower construction and widespread introduction of non-native fish species. The results showed that native fishes experienced a sharp decline through time, with an average of 25.6 (extirpation rate 46.7%) native species extirpated per sub-region, and 89 of 182 (48.9%) native species extirpated across the whole basin during the period considered. However, the number of non-native fish species substantially increased, with an average increase of 8.6 species (invasion rate 26.9%) per sub-region. Furthermore, the percentage of non-native species showed a significant unimodal relationship with average altitude, with highest invasion rates (ca. 70%) in upstream reaches. The extirpation rate was negatively related to altitude, increasing from upstream to downstream reaches. Interestingly, the functional diversity indices (FE_ve, FD_iv, FD_is, RaoQ) and phylogenetic diversity indices (Δ⁺ and Λ⁺) of the entire fish fauna significantly increased through time, whereas these indices based on native fish fauna only did not change. Such increases in functional and phylogenetic diversities were mainly triggered by introductions of non-native species, which were functionally distinct and phylogenetically distant from native species, and extirpation of congeneric endemic species. In general, the present study revealed anthropogenic impacts on the multi-faceted diversity of fish assemblages in a large river and highlighted the negative effects of cascaded hydropower developments and non-native fish invasions on native fish. Moreover, evaluating the responses of multi-faceted diversity to anthropogenic disturbances is a suitable means to understand assemblage reorganization and to assess how such impacts lead to the decline of biodiversity. The complementary information derived from using the multi-faceted diversity approach indicate functional and phylogenetic diversity measures could be implemented in biodiversity planning in the sediment-laden and ecologically important Yellow River Basin.

Do river basins influence the composition of functional traits of fish assemblages in Neotropical reservoirs?

In aquatic environments, dams are considered one of the main threats to fish species, acting as an environmental filter for certain functional traits. Although there is some predictability in the composition of the functional traits in reservoirs, it is hypothesized that the environmental filters imposed by evolutionary processes, linked to the characteristics of the basins, are determinant for the functional composition of the traits in reservoirs. For this we performed a PCoA using the functional traits composition matrix of the reservoirs. We used PERMANOVA to test the difference in functional composition between basins. We performed the same process for the species composition matrix to compare the patterns. In this study, there were taxonomic and functional differences among reservoirs inserted in different basins. It was observed that the basin is a determining factor for the functional structure of fish assemblage in reservoirs. When compared, functional and taxonomic structures follow the same pattern, although functionally the reservoir tends to be more similar. These results reinforce the idea that reservoirs act as filters for functional traits (e.g., related with reproduction, feeding and habitat use), although there is a great influence of evolutionary processes related to the basin's characteristics and origin of the ichthyofaunistic province.