1
|
Gassama S, Garmendia A, Lejeune FX, Boudot de la Motte M, Louapre C, Papeix C, Maillart E, Roux T. A short washout period from fingolimod to anti-CD20 therapy is safe and decreases the risk of reactivation. Rev Neurol (Paris) 2023; 179:1035-1038. [PMID: 37633735 DOI: 10.1016/j.neurol.2023.03.028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Revised: 03/10/2023] [Accepted: 03/27/2023] [Indexed: 08/28/2023]
Abstract
The frequency of switches between Disease Modifying Therapies (DMTs) in Multiple Sclerosis (MS) has increased considerably over previous years. Between fingolimod and anti-CD20 therapies, a 1-month washout period is usually recommended. However, disease reactivations are frequent after fingolimod (Fg) cessation. Using a retrospective observational monocentric exposed/non-exposed cohort study, we investigated the efficacy and the safety of a shorter washout period (WP) between Fg and anti-CD20. We compared two groups: 25 patients with a short WP (<21 days) and 20 patients with a longer WP (>21 days). We observed no reactivation during WP in patients with a short WP against a relapse in 55% of patients in the longer group. Moreover, clinical and biological safety was excellent. Based on these findings, we recommend a shorter WP between fingolimod and anti-CD20 therapies in MS.
Collapse
Affiliation(s)
- S Gassama
- Department of Neurology, centre de ressources et de compétences SEP - Paris, Pitié-Salpêtrière University Hospital, AP-HP, 47, boulevard de l'Hôpital, 75013 Paris, France
| | - A Garmendia
- Department of Neurology, centre de ressources et de compétences SEP - Paris, Pitié-Salpêtrière University Hospital, AP-HP, 47, boulevard de l'Hôpital, 75013 Paris, France
| | - F X Lejeune
- Paris-Brain Institute (ICM), Paris Brain Institute's Data and Analysis Core, Pitié-Salpêtrière Hospital, Sorbonne université, Inserm U1127, CNRS UMR 7225, Paris, France
| | - M Boudot de la Motte
- Department of Neurology, Fondation Adolphe-de-Rothschild Hospital, Paris, France
| | - C Louapre
- Department of Neurology, centre de ressources et de compétences SEP - Paris, Pitié-Salpêtrière University Hospital, AP-HP, 47, boulevard de l'Hôpital, 75013 Paris, France
| | - C Papeix
- Department of Neurology, centre de ressources et de compétences SEP - Paris, Pitié-Salpêtrière University Hospital, AP-HP, 47, boulevard de l'Hôpital, 75013 Paris, France
| | - E Maillart
- Department of Neurology, centre de ressources et de compétences SEP - Paris, Pitié-Salpêtrière University Hospital, AP-HP, 47, boulevard de l'Hôpital, 75013 Paris, France
| | - T Roux
- Department of Neurology, centre de ressources et de compétences SEP - Paris, Pitié-Salpêtrière University Hospital, AP-HP, 47, boulevard de l'Hôpital, 75013 Paris, France.
| |
Collapse
|
2
|
Moya P, Chiva S, Catalá M, Garmendia A, Casale M, Gomez J, Pazos T, Giordani P, Calatayud V, Barreno E. Lichen Biodiversity and Near-Infrared Metabolomic Fingerprint as Diagnostic and Prognostic Complementary Tools for Biomonitoring: A Case Study in the Eastern Iberian Peninsula. J Fungi (Basel) 2023; 9:1064. [PMID: 37998870 PMCID: PMC10672448 DOI: 10.3390/jof9111064] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 10/20/2023] [Accepted: 10/28/2023] [Indexed: 11/25/2023] Open
Abstract
In the 1990s, a sampling network for the biomonitoring of forests using epiphytic lichen diversity was established in the eastern Iberian Peninsula. This area registered air pollution impacts by winds from the Andorra thermal power plant, as well as from photo-oxidants and nitrogen depositions from local and long-distance transport. In 1997, an assessment of the state of lichen communities was carried out by calculating the Index of Atmospheric Purity. In addition, visible symptoms of morphological injury were recorded in nine macrolichens pre-selected by the speed of symptom evolution and their wide distribution in the territory. The thermal power plant has been closed and inactive since 2020. During 2022, almost 25 years later, seven stations of this previously established biomonitoring were revaluated. To compare the results obtained in 1997 and 2022, the same methodology was used, and data from air quality stations were included. We tested if, by integrating innovative methodologies (NIRS) into biomonitoring tools, it is possible to render an integrated response. The results displayed a general decrease in biodiversity in several of the sampling plots and a generalised increase in damage symptoms in the target lichen species studied in 1997, which seem to be the consequence of a multifactorial response.
Collapse
Affiliation(s)
- Patricia Moya
- Instituto Cavanilles de Biodiversidad y Biología Evolutiva (ICBiBE)—Departament de Botànica, Universitat de València, C/Dr. Moliner, 50, Burjassot, E-46100 València, Spain; (S.C.); (T.P.); (E.B.)
| | - Salvador Chiva
- Instituto Cavanilles de Biodiversidad y Biología Evolutiva (ICBiBE)—Departament de Botànica, Universitat de València, C/Dr. Moliner, 50, Burjassot, E-46100 València, Spain; (S.C.); (T.P.); (E.B.)
- Department of Life Sciences, University of Trieste, Via L. Giorgieri 10, 34127 Trieste, Italy
| | - Myriam Catalá
- Instituto de Investigación de Cambio Global (IICG), Department of Biology and Geology, Physics and Inorganic Chemistry, School of Experimental Science & Technology, Rey Juan Carlos University, Av. Tulipán s/n, Móstoles, E-28933 Madrid, Spain; (M.C.); (J.G.)
| | - Alfonso Garmendia
- Instituto Agroforestal Mediterráneo, Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, E-46022 València, Spain;
| | - Monica Casale
- Department of Pharmacy, University of Genova, Viale Cembrano, 4, 16148 Genova, Italy; (M.C.); (P.G.)
| | - Jose Gomez
- Instituto de Investigación de Cambio Global (IICG), Department of Biology and Geology, Physics and Inorganic Chemistry, School of Experimental Science & Technology, Rey Juan Carlos University, Av. Tulipán s/n, Móstoles, E-28933 Madrid, Spain; (M.C.); (J.G.)
| | - Tamara Pazos
- Instituto Cavanilles de Biodiversidad y Biología Evolutiva (ICBiBE)—Departament de Botànica, Universitat de València, C/Dr. Moliner, 50, Burjassot, E-46100 València, Spain; (S.C.); (T.P.); (E.B.)
| | - Paolo Giordani
- Department of Pharmacy, University of Genova, Viale Cembrano, 4, 16148 Genova, Italy; (M.C.); (P.G.)
| | - Vicent Calatayud
- Fundación CEAM, Charles R. Darwin, 14, Paterna, E-46980 València, Spain;
| | - Eva Barreno
- Instituto Cavanilles de Biodiversidad y Biología Evolutiva (ICBiBE)—Departament de Botànica, Universitat de València, C/Dr. Moliner, 50, Burjassot, E-46100 València, Spain; (S.C.); (T.P.); (E.B.)
| |
Collapse
|
3
|
Beltrán R, Cebrián N, Zornoza C, García Breijo F, Reig Armiñana J, Garmendia A, Merle H. Effect of sulfur on pollen germination of Clemenules mandarin and Nova tangelo. PeerJ 2023; 11:e14775. [PMID: 36778141 PMCID: PMC9912945 DOI: 10.7717/peerj.14775] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Accepted: 01/03/2023] [Indexed: 02/10/2023] Open
Abstract
This study aims to elucidate whether sulfur can inhibit citrus pollination by affecting pollen grains. For this, four sulfur-based products (inorganic sulfur, water dispersible granular sulfur, ammonium sulfate, copper sulfate) were tested to evaluate their effect on pollen germination and pollen tube growth of two citrus varieties: Clemenules mandarin (Citrus clementina) and Nova tangelo (Citrus clementina x [Citrus paradisi x Citrus reticulata]). Pollen grains were extracted from the flowers of these two varieties and subsequently placed in Petri dishes with modified BK (boron and potassium) germination medium with six concentrations of the sulfur-based products (0.2, 2, 20, 200, 2,000, 20,000 mg l-1). All the dishes were incubated and the pollen germination rate was calculated. All the sulfur products showed progressive pollen germination inhibition with a rising sulfur concentration. CTC50 (50% cytotoxicity inhibition) was around 20 mg l-1, with significant differences among treatments. Total pollen germination inhibition took place at 20,000 mg l-1. These results demonstrate that sulfur application can affect citrus pollination.
Collapse
Affiliation(s)
- Roberto Beltrán
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Nuria Cebrián
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Carlos Zornoza
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Francisco García Breijo
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - José Reig Armiñana
- Instituto Cavanilles de Biodiversidad y Biología Evolutiva, Universidad de Valencia, Valencia, Spain
| | - Alfonso Garmendia
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Valencia, Spain
| | - Hugo Merle
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| |
Collapse
|
4
|
Garmendia A, Raigón MD, García-Breijo F, Reig J, Beltrán R, Zornoza C, Cebrián N, Merle H. Agronomic treatments to avoid presence of seeds in Nadorcott mandarin II. Effect on seed number per fruit and yield. PLoS One 2022; 17:e0278934. [PMID: 36490267 PMCID: PMC9733848 DOI: 10.1371/journal.pone.0278934] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 11/23/2022] [Indexed: 12/13/2022] Open
Abstract
Nadorcott is a well-established and appreciated mandarin by the fresh market. However, it produces seeds due to cross-pollination with other compatible varieties, which is quite frequent in most producing countries. Consumers prefer seedless mandarins and, therefore, citrus growers need techniques to avoid seeds forming. This study aims to evaluate the effect of six treatments (ammonium nitrate, potassium nitrate, sulfur, saccharose, methylcellulose, callose) on seed number per fruit when applied to Nadorcott trees. In this way, we evaluate which of them is more efficient and can be used in the future as an agronomic treatment to avoid seeds in mandarins. The effect of treatments on yield and fruit quality is also reported. To fulfill this main objective, a randomized complete block design experiment with three applications at flowering was performed on trees. Of the six tested treatments, only elemental sulfur was able to significantly reduce seed number by 87% compared to the positive control. This is a very novel result because it is the first time that such an effective treatment has been found. The biggest seed number per fruit was obtained for the saccharose treatment. Treatments did not significantly influence yield or fruit quality. These results are entirely consistent with a previous study that evaluated the effect of the same products on pollen tube growth, and they can help to develop new techniques. Nevertheless, more studies are necessary to test, for example, different treatment doses.
Collapse
Affiliation(s)
- Alfonso Garmendia
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Valencia, Spain
| | - María Dolores Raigón
- Instituto de Conservación y Mejora de la Agrobiodiversidad Valenciana/Departamento de Química, Universitat Politècnica de València, Valencia, Spain
| | - Francisco García-Breijo
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - José Reig
- Instituto Cavanilles de Biodiversidad y Biología Evolutiva, Universidad de Valencia, Valencia, Spain
| | - Roberto Beltrán
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Carlos Zornoza
- S.A. Explotaciones Agrícolas Serrano (SAEAS), Valencia, Spain
| | - Nuria Cebrián
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Hugo Merle
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| |
Collapse
|
5
|
Garmendia A, Merle H, Sanía M, López C, Ferriol M. Morphologic, genetic, and biogeographic continua among subspecies hinder the conservation of threatened taxa: the case of Centaurea aspera ssp. scorpiurifolia (Asteraceae). Sci Rep 2022; 12:932. [PMID: 35042932 PMCID: PMC8766572 DOI: 10.1038/s41598-022-04934-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Accepted: 12/28/2021] [Indexed: 12/03/2022] Open
Abstract
Subspecies are widely included as conservation units because of their potential to become new species. However, their practical recognition includes variable criteria, such as morphological, genetic, geographic and other differences. Centaurea aspera ssp. scorpiurifolia is a threatened taxon endemic to Andalusia (Spain), which coexists in most of its distribution area with similar taxa. Because of the difficulty to identify it using morphology alone, we aimed to sample all the populations cited as ssp. scorpiurifolia as exhaustively as possible, morphologically characterise them, and analyse their genetic structuring using microsatellites, to better understand difficulties when conserving subspecies. Three different Centaurea species were found which were easily identified. Within C. aspera, two genetic populations and some admixed individuals were observed, one including ssp. scorpiurifolia individuals and the other including individuals identified as subspecies aspera, stenophylla, and scorpiurifolia. A morphological continuum between these two genetic populations and a wide overlapping of their biogeographic distribution were also found. This continuum can affect the conservation of ssp. scorpiurifolia because of potential misidentifications and harmful effects of subspecific hybridization. Misidentifications could be partly overcome by using as many different traits as possible, and conservation priority should be given to populations representative of the ends of this continuum.
Collapse
Affiliation(s)
- Alfonso Garmendia
- Instituto Agroforestal Mediterráneo (IAM), Universitat Politècnica de València, Camino de Vera s/n, 46022, Valencia, Spain
| | - Hugo Merle
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Marta Sanía
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Carmelo López
- Centro Para La Conservación Y Mejora de La Agrodiversidad Valenciana (COMAV), Universitat Politècnica de València, Valencia, Spain
| | - María Ferriol
- Instituto Agroforestal Mediterráneo (IAM), Universitat Politècnica de València, Camino de Vera s/n, 46022, Valencia, Spain.
| |
Collapse
|
6
|
Gramazio P, Pereira-Dias L, Vilanova S, Prohens J, Soler S, Esteras J, Garmendia A, Díez MJ. Morphoagronomic characterization and whole-genome resequencing of eight highly diverse wild and weedy S. pimpinellifolium and S. lycopersicum var. cerasiforme accessions used for the first interspecific tomato MAGIC population. Hortic Res 2020; 7:174. [PMID: 33328432 PMCID: PMC7603519 DOI: 10.1038/s41438-020-00395-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2020] [Revised: 08/02/2020] [Accepted: 08/30/2020] [Indexed: 05/11/2023]
Abstract
The wild Solanum pimpinellifolium (SP) and the weedy S. lycopersicum var. cerasiforme (SLC) are largely unexploited genetic reservoirs easily accessible to breeders, as they are fully cross-compatible with cultivated tomato (S. lycopersicum var. lycopersicum). We performed a comprehensive morphological and genomic characterization of four wild SP and four weedy SLC accessions, selected to maximize the range of variation of both taxa. These eight accessions are the founders of the first tomato interspecific multi-parent advanced generation inter-cross (MAGIC) population. The morphoagronomic characterization was carried out with 39 descriptors to assess plant, inflorescence, fruit and agronomic traits, revealing the broad range of diversity captured. Part of the morphological variation observed in SP was likely associated to the adaptation of the accessions to different environments, while in the case of SLC to both human activity and adaptation to the environment. Whole-genome resequencing of the eight accessions revealed over 12 million variants, ranging from 1.2 to 1.9 million variants in SLC and from 3.1 to 4.8 million in SP, being 46.3% of them (4,897,803) private variants. The genetic principal component analysis also confirmed the high diversity of SP and the complex evolutionary history of SLC. This was also reflected in the analysis of the potential footprint of common ancestors or old introgressions identified within and between the two taxa. The functional characterization of the variants revealed a significative enrichment of GO terms related to changes in cell walls that would have been negatively selected during domestication and breeding. The comprehensive morphoagronomic and genetic characterization of these accessions will be of great relevance for the genetic analysis of the first interspecific MAGIC population of tomato and provides valuable knowledge and tools to the tomato community for genetic and genomic studies and for breeding purposes.
Collapse
Affiliation(s)
- Pietro Gramazio
- Faculty of Life and Environmental Sciences, University of Tsukuba, 1-1-1 Tennodai, 305-8572, Tsukuba, Japan
| | - Leandro Pereira-Dias
- Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Camino de Vera 14, 46022, Valencia, Spain
| | - Santiago Vilanova
- Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Camino de Vera 14, 46022, Valencia, Spain
| | - Jaime Prohens
- Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Camino de Vera 14, 46022, Valencia, Spain
| | - Salvador Soler
- Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Camino de Vera 14, 46022, Valencia, Spain
| | - Javier Esteras
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Camino de Vera 14, 46022, Valencia, Spain
| | - Alfonso Garmendia
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Camino de Vera 14, 46022, Valencia, Spain
| | - María José Díez
- Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Camino de Vera 14, 46022, Valencia, Spain.
| |
Collapse
|
7
|
Garmendia A, Ferriol M, Benavent D, Ferrer-Gallego PP, Merle H. Intra- and Inter-Specific Crosses among Centaurea aspera L. (Asteraceae) Polyploid Relatives-Influences on Distribution and Polyploid Establishment. Plants (Basel) 2020; 9:E1142. [PMID: 32899362 PMCID: PMC7569768 DOI: 10.3390/plants9091142] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2020] [Revised: 08/31/2020] [Accepted: 09/02/2020] [Indexed: 05/24/2023]
Abstract
How polyploids become established is a long-debated question, especially for autopolyploids that seem to have no evolutionary advantage over their progenitors. The Centaurea aspera polyploid complex includes diploid C. aspera and two related tetraploids C. seridis and C. gentilii. Our purpose was to study the mating system among these three taxa and to analyze its influence on polyploid establishment. The distribution and ploidy level of the Moroccan populations, and forced intra- and inter-specific crosses were assessed. Allotetraploid C. seridis produced more cypselae per capitulum in the intra-specific crosses. It is a bigger plant and autogamous, and previous studies indicated that selfing forces the asymmetric formation of sterile hybrids. All these characteristics help C. seridis to avoid the minority-cytotype-exclusion effect and become established. Inter-specific hybridization was possible between C. aspera and C. gentilii, and with the symmetric formation of hybrids. However, 49% of the hybrid cypselae were empty, which probably reveals postzygotic barriers. Autotetraploid C. gentilii produced the same number of cypselae per capitulum as those of the diploid parental, has an indistinguishable field phenotype, is allogamous, and symmetrically produces hybrids. Therefore, C. gentilii does not seem to have the same competitive advantages as those of C. seridis.
Collapse
Affiliation(s)
- Alfonso Garmendia
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, ES-46022 Valencia, Spain; (A.G.); (M.F.)
| | - María Ferriol
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, ES-46022 Valencia, Spain; (A.G.); (M.F.)
| | - David Benavent
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, ES-46022 Valencia, Spain;
| | - P. Pablo Ferrer-Gallego
- Servicio de Vida Silvestre, Centro para la Investigación y la Experimentación Forestal - VAERSA, Generalitat Valenciana, Avda. Comarques del País Valencià 114, Quart de Poblet, ES-46930 Valencia, Spain;
| | - Hugo Merle
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, ES-46022 Valencia, Spain;
| |
Collapse
|
8
|
Pedrola-Monfort J, Lázaro-Gimeno D, Boluda CG, Pedrola L, Garmendia A, Soler C, Soriano JM. Evolutionary Trends in the Mitochondrial Genome of Archaeplastida: How Does the GC Bias Affect the Transition from Water to Land? Plants (Basel) 2020; 9:plants9030358. [PMID: 32178249 PMCID: PMC7154891 DOI: 10.3390/plants9030358] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/20/2020] [Revised: 03/09/2020] [Accepted: 03/11/2020] [Indexed: 12/22/2022]
Abstract
Among the most intriguing mysteries in the evolutionary biology of photosynthetic organisms are the genesis and consequences of the dramatic increase in the mitochondrial and nuclear genome sizes, together with the concomitant evolution of the three genetic compartments, particularly during the transition from water to land. To clarify the evolutionary trends in the mitochondrial genome of Archaeplastida, we analyzed the sequences from 37 complete genomes. Therefore, we utilized mitochondrial, plastidial and nuclear ribosomal DNA molecular markers on 100 species of Streptophyta for each subunit. Hierarchical models of sequence evolution were fitted to test the heterogeneity in the base composition. The best resulting phylogenies were used for reconstructing the ancestral Guanine-Cytosine (GC) content and equilibrium GC frequency (GC*) using non-homogeneous and non-stationary models fitted with a maximum likelihood approach. The mitochondrial genome length was strongly related to repetitive sequences across Archaeplastida evolution; however, the length seemed not to be linked to the other studied variables, as different lineages showed diverse evolutionary patterns. In contrast, Streptophyta exhibited a powerful positive relationship between the GC content, non-coding DNA, and repetitive sequences, while the evolution of Chlorophyta reflected a strong positive linear relationship between the genome length and the number of genes.
Collapse
Affiliation(s)
- Joan Pedrola-Monfort
- Cavanilles Institute of Biodiversity and Evolutionary Biology, University of Valencia, 46980 Paterna, Spain; (J.P.-M.); (D.L.-G.); (C.G.B.); (L.P.)
| | - David Lázaro-Gimeno
- Cavanilles Institute of Biodiversity and Evolutionary Biology, University of Valencia, 46980 Paterna, Spain; (J.P.-M.); (D.L.-G.); (C.G.B.); (L.P.)
| | - Carlos G. Boluda
- Cavanilles Institute of Biodiversity and Evolutionary Biology, University of Valencia, 46980 Paterna, Spain; (J.P.-M.); (D.L.-G.); (C.G.B.); (L.P.)
- Unité de Phylogénie et Génetique Moléculaires, Conservatoire et Jardin Botaniques, Chambésy, 1292 Geneva, Switzerland
| | - Laia Pedrola
- Cavanilles Institute of Biodiversity and Evolutionary Biology, University of Valencia, 46980 Paterna, Spain; (J.P.-M.); (D.L.-G.); (C.G.B.); (L.P.)
| | - Alfonso Garmendia
- Mediterranean Agroforestry Institute, Department of Agroforest Ecosystems, Polytechnic University of Valencia, 46022 Valencia, Spain;
| | - Carla Soler
- Biomaterials, Institute of Materials Science, University of Valencia, 46980 Paterna, Spain;
| | - Jose M. Soriano
- Biomaterials, Institute of Materials Science, University of Valencia, 46980 Paterna, Spain;
- Correspondence: ; Tel.: +34-963-543-056
| |
Collapse
|
9
|
Beltrán R, Valls A, Cebrián N, Zornoza C, García Breijo F, Reig Armiñana J, Garmendia A, Merle H. Effect of temperature on pollen germination for several Rosaceae species: influence of freezing conservation time on germination patterns. PeerJ 2019; 7:e8195. [PMID: 31844584 PMCID: PMC6911343 DOI: 10.7717/peerj.8195] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2019] [Accepted: 11/12/2019] [Indexed: 11/20/2022] Open
Abstract
Between February 2018 and April 2018, flowers were collected from eight Rosaceae species. Flowers were kept in a freezer at -20 °C for three freezing times (Treatment 1, two months; Treatment 2, four months; Treatment 3, six months). After extracting pollen, in vitro germination was induced in a culture medium and incubated at six different temperatures for 72 h. The percentage of pollen germination, average pollen tube length and maximum pollen tube length were measured. Pollen germination was maximum for all species between 15 °C and 30 °C. Cydonia oblonga, Malus sylvestris, Prunus avium, Prunus domestica, Prunus dulcis, Prunus persica and Pyrus communis obtained 30-52% pollen germination between 15 °C and 20 °C. Prunus cerasifera had 40% pollen germination at 30 °C. All species studied reached the maximum pollen tube length between 10 °C and 25 °C. Germination did not change significantly for any of the species with freezing time, but we found significant differences in the three parameters measured between treatments. The highest germination percentages were obtained in Treatment 2 (four months frozen at -20 °C), while the maximum pollen tube length was reached in Treatment 1 (two months frozen at -20 °C). According to our results, freezing time affected the germination-temperature patterns. This could indicate that studies on the effect of temperature on pollen germination should always be carried out with fresh pollen to obtain more conclusive data.
Collapse
Affiliation(s)
- Roberto Beltrán
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Aina Valls
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Nuria Cebrián
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Carlos Zornoza
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Francisco García Breijo
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - José Reig Armiñana
- Instituto Cavanilles de Biodiversidad y Biología Evolutiva, Universidad de Valencia, Valencia, Spain
| | - Alfonso Garmendia
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Valencia, Valencia, Spain
| | - Hugo Merle
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| |
Collapse
|
10
|
Garmendia A, Beltrán R, Zornoza C, García-Breijo FJ, Reig J, Raigón MD, Merle H. Forced Flowering in Mandarin Trees under Phytotron Conditions. J Vis Exp 2019. [PMID: 30907871 DOI: 10.3791/59258] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022] Open
Abstract
Phytotron has been widely used to assess the effect of numerous parameters on the development of many species. However, less information is available on how to achieve fast profuse flowering in young fruit trees with this plant growth chamber. This study aimed to outline the design and performance of a fast clear methodology to force flowering in young mandarin trees (cv. Nova and cv. Clemenules) and to analyze the influence of induction intensity on inflorescence type. The combination of a short water stress period with simulated spring conditions (day 13 h, 22 °C, night 11 h, 12 °C) in the phytotron allowed flowers to be obtained only after 68-72 days from the time the experiment began. Low-temperature requirements were adequately replaced with water stress. Floral response was proportional to water stress (measured as the number of fallen leaves): the greater the induction, the larger the quantity of flowers. Floral induction intensity also influenced inflorescence type and dates for flowering. Details on artificial lighting (lumens), photoperiod, temperatures, plant size and age, induction strategy and days for each stage are provided. Obtaining flowers from fruit trees at any time, and also several times a year, can have many advantages for researchers. With the methodology proposed herein, three, or even four, flowering periods can be forced each year, and researchers should be able to decide when, and they will know, the duration of the entire process. The methodology can be useful for: flower production and in vitro pollen germination assays; experiments with pests that affect early fruit development stages; studies on fruit physiological alterations. All this can help plant breeders to shorten times to obtain male and female gametes to perform forced-crosses.
Collapse
Affiliation(s)
- Alfonso Garmendia
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València
| | - Roberto Beltrán
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València
| | | | | | - José Reig
- Instituto Cavanilles de Biodiversidad y Biología Evolutiva, Jardín Botánico Universitat de València
| | - María Dolores Raigón
- Instituto Universitario de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València
| | - Hugo Merle
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València;
| |
Collapse
|
11
|
Garmendia A, Merle H, Ruiz P, Ferriol M. Distribution and ecological segregation on regional and microgeographic scales of the diploid Centaurea aspera L., the tetraploid C. seridis L., and their triploid hybrids (Compositae). PeerJ 2018; 6:e5209. [PMID: 30002989 PMCID: PMC6034602 DOI: 10.7717/peerj.5209] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2018] [Accepted: 06/20/2018] [Indexed: 11/20/2022] Open
Abstract
Although polyploidy is considered a ubiquitous process in plants, the establishment of new polyploid species may be hindered by ecological competition with parental diploid taxa. In such cases, the adaptive processes that result in the ecological divergence of diploids and polyploids can lead to their co-existence. In contrast, non-adaptive processes can lead to the co-existence of diploids and polyploids or to differentiated distributions, particularly when the minority cytotype disadvantage effect comes into play. Although large-scale studies of cytotype distributions have been widely conducted, the segregation of sympatric cytotypes on fine scales has been poorly studied. We analysed the spatial distribution and ecological requirements of the tetraploid Centaurea seridis and the diploid Centaurea aspera in east Spain on a large scale, and also microspatially in contact zones where both species hybridise and give rise to sterile triploid hybrids. On the fine scale, the position of each Centaurea individual was recorded along with soil parameters, accompanying species cover and plant richness. On the east Spanish coast, a slight latitudinal gradient was found. Tetraploid C. seridis individuals were located northerly and diploid C. aspera individuals southerly. Tetraploids were found only in the habitats with strong anthropogenic disturbance. In disturbed locations with well-developed semi-fixed or fixed dunes, diploids and tetraploids could co-exist and hybridise. However, on a fine scale, although taxa were spatially segregated in contact zones, they were not ecologically differentiated. This finding suggests the existence of non-adaptive processes that have led to their co-existence. Triploid hybrids were closer to diploid allogamous mothers (C. aspera) than to tetraploid autogamous fathers (C. seridis). This may result in a better ability to compete for space in the tetraploid minor cytotype, which might facilitate its long-term persistence.
Collapse
Affiliation(s)
- Alfonso Garmendia
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Valencia, Spain
| | - Hugo Merle
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Pablo Ruiz
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Maria Ferriol
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Valencia, Spain
| |
Collapse
|
12
|
Garmendia A, Raigón MD, Marques O, Ferriol M, Royo J, Merle H. Effects of nettle slurry ( Urtica dioica L.) used as foliar fertilizer on potato ( Solanum tuberosum L.) yield and plant growth. PeerJ 2018; 6:e4729. [PMID: 29761049 PMCID: PMC5944444 DOI: 10.7717/peerj.4729] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2018] [Accepted: 04/16/2018] [Indexed: 11/20/2022] Open
Abstract
Organic agriculture is becoming increasingly important, and many natural products are now available for organic farmers to manage and improve their crops. Several ethnobotanical studies have indicated that the use of nettle slurry as fertilizer in organic farming for horticultural crops is spreading. Sometimes, however, the consequences of using these natural products have been poorly evaluated, and there is very little scientific evidence for the effects of using these slurries. In this study, we aimed to analyze the possible effect of nettle slurry on potato yields produced by organic farming. To achieve this main objective, we assessed the effect of nettle slurry on potato yields, plant size and growth parameters, chlorophyll content, and the presence of pests and diseases. Different slurry doses were assessed in 36 plots and nine variables were measured during the crop cycle. Under these field experimental conditions, nettle slurry (including one treatment with Urtica in combination with Equisetum) had no significant effects on yield, chlorophyll content, or the presence of pests and diseases in organic potato crops. The highest chlorophyll content was found in the double dose treatment, but the difference was not significant. This result, together with a small improvement in plant height with the double dose treatment, might indicate very slight crop enhancement which, under our experimental conditions, was not enough to improve yield. The Urtica and Equisetum slurry chemical analyses showed very low levels of nitrogen, phosphorus, and potassium.
Collapse
Affiliation(s)
- Alfonso Garmendia
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Valencia, Spain
| | - María Dolores Raigón
- Instituto Universitario de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Valencia, Spain
| | - Olmo Marques
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, València, Spain
| | - María Ferriol
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Valencia, Spain
| | - Jorge Royo
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, València, Spain
| | - Hugo Merle
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, València, Spain
| |
Collapse
|
13
|
Ferriol M, Garmendia A, Gonzalez A, Merle H. Allogamy-Autogamy Switch Enhance Assortative Mating in the Allotetraploid Centaurea seridis L. Coexisting with the Diploid Centaurea aspera L. and Triggers the Asymmetrical Formation of Triploid Hybrids. PLoS One 2015; 10:e0140465. [PMID: 26469271 PMCID: PMC4607450 DOI: 10.1371/journal.pone.0140465] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2015] [Accepted: 09/25/2015] [Indexed: 11/19/2022] Open
Abstract
Hybridization between tetraploids and their related diploids is generally unsuccessful in Centaurea, hence natural formation of triploid hybrids is rare. In contrast, the diploid Centaurea aspera and the allotetraploid C. seridis coexist in several contact zones where a high frequency of triploid hybrids is found. We analyzed the floral biology of the three taxa to identify reproductive isolation mechanisms that allow their coexistence. Flowering phenology was recorded, and controlled pollinations within and between the three taxa were performed in the field. Ploidy level and germination of progeny were also assessed. There was a 50% flowering overlap which indicated a phenological shift. Diploids were strictly allogamous and did not display mentor effects, while tetraploids were found to be highly autogamous. This breakdown of self-incompatibility by polyploids is first described in Centaurea. The asymmetrical formation of the hybrid was also found: all the triploid intact cypselae came from the diploid mothers pollinated by the pollen of tetraploids. Pollen and eggs from triploids were totally sterile, acting as a strong triploid block. These prezygotic isolation mechanisms ensured higher assortative mating in tetraploids than in diploids, improving their persistence in the contact zones. However these mechanisms can also be the cause of the low genetic diversity and high genetic structure observed in C. seridis.
Collapse
Affiliation(s)
- María Ferriol
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Valencia, Spain
| | - Alfonso Garmendia
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Valencia, Spain
| | - Ana Gonzalez
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| | - Hugo Merle
- Departamento de Ecosistemas Agroforestales, Universitat Politècnica de València, Valencia, Spain
| |
Collapse
|
14
|
Garmendia A, Ferriol M, Juarez J, Zając A, Kałużny K, Merle H. A rare case of a natural contact zone in Morocco between an autopolyploid and an allopolyploid of Centaurea aspera with sterile tetraploid hybrids. Plant Biol (Stuttg) 2015; 17:746-757. [PMID: 25363815 DOI: 10.1111/plb.12284] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2014] [Accepted: 10/24/2014] [Indexed: 06/04/2023]
Abstract
A new contact zone between Centaurea aspera and Centaurea seridis was found in Morocco. Chromosome counts and flow cytometry showed that both taxa were tetraploid (4x = 44). A literature review and morphometric analysis established that C. aspera corresponds to the autopolyploid C. aspera subsp. gentilii and C. seridis corresponds to the allopolyploid C. seridis var. auriculata. This contact area was compared with the homologous contact zones in Spain formed by the diploid C. aspera subsp. stenophylla and the tetraploid C. seridis subsp. maritima. Natural hybrids between parental species were frequent in both areas. In Spain, hybrids were triploid (from reduced gametes A and gamete AB), highly sterile and exerted a 'triploid block'. In Morocco, cytometry showed that hybrids were tetraploid and, therefore, probably fertile, but all the capitula lacked achenes. It is likely that the resulting genome of the new tetraploid hybrid (AAAB), through the fusion of reduced gametes AA (from subsp. gentilii) and AB (from var. auriculata), could explain irregularities in meiosis through formation of aneuploid gametes and, therefore, infertility of the hybrid. Moroccan sterile tetraploid hybrids develop, but have the identical irregularities to Spanish triploids, probably due to the odd number of homologous chromosomes. The new hybrid is first described as C. x subdecurrens nothosubsp. paucispinus. In addition, distribution and ecological traits are analysed.
Collapse
Affiliation(s)
- A Garmendia
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Valencia, Spain
| | | | | | | | | | | |
Collapse
|
15
|
Altzibar JM, Zigorraga C, Rodriguez R, Leturia N, Garmendia A, Rodriguez A, Alkorta M, Arriola L. Outbreak of acute gastroenteritis caused by contamination of drinking water in a factory, the Basque Country. J Water Health 2015; 13:168-173. [PMID: 25719476 DOI: 10.2166/wh.2014.048] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
On 18 September 2013, the Gipuzkoa Epidemiology Unit was notified of an outbreak of acute gastroenteritis (AGE) among employees at a domestic appliance factory. The first signs of the outbreak had emerged at the end of June and at the time of the notification 30 workers were on sick leave for gastroenteritis. Some employees had had more than one episode and the main symptoms were diarrhoea and vomiting. An investigation began to identify the causative agent, assess exposure and determine the route of transmission. Data collected by a questionnaire identified 302 episodes of AGE among 238 people affected between June and September 2013. The source of water consumed was found to be a risk factor associated with the appearance of symptoms both in the crude and the adjusted analysis: odds ratio 1.8 (0.8-4.2) and 6.4 (4.2-9.8), respectively. Microbiological analysis of stool samples and of water confirmed the presence of norovirus and rotavirus. The environmental study detected a connection between an industrial use water system and drinking water at the factory. It was concluded that the outbreak was caused by mixed viral infections, due to contamination of drinking water.
Collapse
Affiliation(s)
- J M Altzibar
- Public Health Division of Gipuzkoa, Epidemiology Unit, Gipuzkoa, Basque Government, Spain; Instituto BIO-Donostia, San Sebastian, Gipuzkoa, Basque Government, Spain and CIBER Epidemiología y Salud Pública, CIBERESP, Spain E-mail:
| | - C Zigorraga
- Public Health Laboratory of Gipuzkoa, Gipuzkoa, Basque Government, Spain
| | - R Rodriguez
- Public Health Laboratory of Gipuzkoa, Gipuzkoa, Basque Government, Spain
| | - N Leturia
- Public Health, Alto-Bajo Deba Health District, Gipuzkoa, Basque Government, Spain
| | - A Garmendia
- Public Health, Alto-Bajo Deba Health District, Gipuzkoa, Basque Government, Spain
| | - A Rodriguez
- Microbiology Department, Alto-Deba Hospital, Gipuzkoa, Basque Government, Spain
| | - M Alkorta
- Microbiology Department, Hospital Universitario Donostia, San Sebastian, Gipuzkoa, Basque Government, Spain and Instituto BIO-Donostia, San Sebastian, Gipuzkoa, Basque Government, Spain
| | - L Arriola
- Public Health Division of Gipuzkoa, Epidemiology Unit, Gipuzkoa, Basque Government, Spain; Instituto BIO-Donostia, San Sebastian, Gipuzkoa, Basque Government, Spain and CIBER Epidemiología y Salud Pública, CIBERESP, Spain E-mail:
| |
Collapse
|
16
|
San-Jose M, Garmendia A, Cano-Santana Z. Vertebrate Fauna Evaluation After Habitat Restoration in a Reserve within Mexico City. ECOL RESTOR 2013. [DOI: 10.3368/er.31.3.249] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
|
17
|
Austin JD, Bertin A, Bórquez JP, Cárdenas L, Cardoza TB, Chapman F, De Sousa ACB, De Souza AP, Douglas KC, Ellwood SR, Ferriol M, Garmendia A, Gouin N, Hargrove J, Jasti M, Keränen I, Knott KE, Konec M, Kuitunen K, Lima MP, Linde CC, Merle H, Oliva ME, Pérez M, Saarinen E, Samollow PB, Scarpassa VM, Segura I, Smith L, Trontelj P, Valdivia IM, Wallwork H, Wellenreuther M. Permanent genetic resources added to Molecular Ecology Resources Database 1 February 2011-31 March 2011. Mol Ecol Resour 2011; 11:757-8. [PMID: 21627775 DOI: 10.1111/j.1755-0998.2011.03028.x] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
This article documents the addition of 111 microsatellite marker loci to the Molecular Ecology Resources Database. Loci were developed for the following species: Acipenser oxyrinchus desotoi, Anopheles nuneztovari sensu lato, Asellus aquaticus, Calopteryx splendens, Calopteryx virgo, Centaurea aspera, Centaurea seridis, Chilina dombeyana, Proctoeces cf. lintoni and Pyrenophora teres f. teres.
Collapse
Affiliation(s)
-
- Molecular Ecology Resources Editorial Office, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|
18
|
Garmendia A, Garmendia L, Salvador A. The importance of the intensity and frequency of perturbations on the germination delay. Math Biosci 2007; 211:153-65. [PMID: 18048064 DOI: 10.1016/j.mbs.2007.10.002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2007] [Revised: 09/26/2007] [Accepted: 10/15/2007] [Indexed: 10/22/2022]
Abstract
An iterative model is developed to evaluate the reproductive strategies of plants in environments with different frequencies and intensities of disturbance. Two extreme reproductive strategies are compared: the "homocarpic" strategy, in which all the seeds germinate the following spring, without dormancy, and the "heterocarpic" strategy, whereby, each year, half of the existing seeds germinate. It is observed that this sort of heterocarpy is beneficial in environments with strong perturbations, in which a high percentage of the population dies. However, the frequency of such perturbations does not cause changes in the advantage of one strategy over the other. The results suggest that the intensity of the disturbance is much more important than the frequency.
Collapse
Affiliation(s)
- Alfonso Garmendia
- Department of Agro-Forest Ecosystems, Mediterranean Agro-forest Institute, Technical University of Valencia, ETSMRE (UPV), Av Blasco Ibáñez 21, 46010, Valencia, Spain.
| | | | | |
Collapse
|
19
|
Garmendia A, Salvador A. Fractal dimension of birds population sizes time series. Math Biosci 2005; 206:155-71. [PMID: 16185719 DOI: 10.1016/j.mbs.2005.03.014] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2004] [Revised: 01/25/2005] [Accepted: 03/03/2005] [Indexed: 10/25/2022]
Abstract
Information about fractal dimension is collected so that it can be applied to time series interpreting Hurst coefficient. The population size of a species is modelled as a dynamic system. The Hurst coefficient is calculated for these times series. A computer programme has been elaborated to compute the Hurst exponent of time series using the algorithms of range increment, second order moment increment and local second order moment increment. It has been applied to time series of birds' populations.
Collapse
Affiliation(s)
- Alfonso Garmendia
- Department of Agro-Forest Ecosystems, Higher Technical School of Rural Environments and Enology, Polytechnic University of Valencia, Av. Blasco Ibáñez 21, 46010 Valencia, Spain.
| | | |
Collapse
|
20
|
González Pérez-Yarza E, Garmendia A, Callén M, Mintegui J. [The utilization of anticholinergic bronchodilators in pediatrics]. Arch Bronconeumol 1998; 33 Suppl 2:27-33. [PMID: 9480026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- E González Pérez-Yarza
- Sección de Neumología Pediátrica, Unidad de Asma, Hospital Ntra. Sra. de Aránzazu, San Sebastián
| | | | | | | |
Collapse
|
21
|
Gónzález Pérez-Yarza E, Mintegui J, Garmendia A, Callén M, Reguilón MJ, Garrido A, Emparanza JI. [The excretion of free cortisol in the urine in healthy children and in asthmatics treated with long-term inhaled glucocorticoids]. An Esp Pediatr 1996; 44:531-536. [PMID: 8796962] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
OBJECTIVE To assess urinary free cortisol (UFC) excretion in 24 hour urine samples collected from asthmatic children treated with inhaled glucocorticoids (IGC). PATIENTS AND METHODS A retrospective cohort study was performed on a group of 358 children between the ages of 3 and 14 years. The children were divided into two groups, a normal population (n = 108) and an asthma group (n = 250). These children were treated uninterruptedly with IGC (mean dose 676 micrograms/day) during 17 +/- 8 months with budesonide (n = 221) or beclomethasone (n = 29) in dry powder (n = 167) or MDI with spacer chamber (n = 83). We considered the 24 hour urine sample valid when creatinine levels in blood and urine, as well as creatinine clearance, were normal. We determined UFC with a specific direct radioimmunoassay after cortisol extraction with dichloromethane. We performed a short ACTH test to assess the subnormal adrenocortical function when UC excretion in AG was less than -1SD. RESULTS UFC excretion was 81.98 +/- 32.12 nmol/m2/day in the asthma group. There was no correlation between UFC and the mean dose of IGC, total dose given, device used for inhalation, time of treatment or oral glucocorticoid series. The subgroup treated with beclomethasone presented UF rates lower than the subgroup treated with budesonide. Except for two cases, the ACTH test performed in the AG had normal adrenocortical responses. CONCLUSION 1) We established the normal values for UFC excretion in our pediatric population. 2) The long term asthma treatment with glucocorticoids at mean doses of 650 micrograms l/m2/day decrease physiologically the UFC excretion since the adrenocortical response remains within the normal range.
Collapse
|
22
|
Callén M, Garmendia A, Mintegui J, Pérez-Yarza EG. [Humidity, dehumidification and concentration of Acari]. Arch Bronconeumol 1995; 31:94-5. [PMID: 7704400 DOI: 10.1016/s0300-2896(15)30974-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
|
23
|
Pérez-Yarza E, Garmendia A, Mintegui J, Callén M, Garrido A, Emparanza J, Albisu Y. Inhalación prolongada de budesonida en niños y respuesta suprarrenal. Arch Bronconeumol 1993. [DOI: 10.1016/s0300-2896(15)31163-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
24
|
|
25
|
Pérez-Yarza EG, Garmendia A, Mintegui J, Callen MT, Emparanza JI, Albisu Y. [Administration of immunotherapy with allergens: importance of measuring the maximal expiratory flow rate]. An Esp Pediatr 1992; 36:404-5. [PMID: 1616206] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
|
26
|
Pérez-Yarza EG, Mintegui J, Garmendia A, Callen MT, Emparanza JI, Albisu Y. [Ipratropium bromide in asthmatic crisis in infants]. An Esp Pediatr 1992; 36:161. [PMID: 1533498] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
|
27
|
Pérez-Yarza EG, Aldamiz-Echevarría L, Emparanza JI, Garmendia A. [Adult-type respiratory distress associated with varicella]. An Esp Pediatr 1987; 26:141-2. [PMID: 3565955] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
|
28
|
Garmendia F, Valdivia H, Castillo O, Ugarte N, Garmendia A. Hypothalamo-hypophyso-gonadal response to clomiphene citrate at median high altitude. Horm Metab Res 1982; 14:679-80. [PMID: 6818121 DOI: 10.1055/s-2007-1019118] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
|