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Seraj A, Allafchian A, Karimzadeh F, Valikhani A, Jalali SAH. Improving water treatment using a novel antibacterial kappa-carrageenan-coated magnetite decorated with silver nanoparticles. Environ Sci Pollut Res Int 2023; 30:92611-92620. [PMID: 37491498 DOI: 10.1007/s11356-023-28804-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2023] [Accepted: 07/11/2023] [Indexed: 07/27/2023]
Abstract
In this study, we aimed to fabricate an enhanced antibacterial agent to act against pathogenic bacteria in aqueous environments. To achieve this, silver nanoparticles (AgNPs) were inlaid on a kappa-carrageenan (KC) base and coated on Fe3O4 magnetic cores (Fe3O4@KC@Ag). Superparamagnetic Fe3O4 nanoparticles were designed at the center of the composite nanostructure, allowing magnetic recovery from aqueous media in the presence of a magnet. The synthesized nanoconjugate was characterized in each step using XRD, FT-IR, EDX, FE-SEM, TEM, DLS, VSM, and disk-diffusion antibacterial method. Results show that the nanocomposite system is formed, while the magnetic properties remain practically stable. The agglomeration of the AgNPs was decreased by the trap-like function of KC coating, which resulted in an improved antibacterial activity for the Fe3O4@KC@Ag formulation. These findings suggest that Fe3O4@KC@Ag nanocomposites could be promising agents for combating bacterial infections in aqueous environments.
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Affiliation(s)
- Ali Seraj
- Department of Materials Engineering, Isfahan University of Technology, 84156, Isfahan, 83111, Iran
| | - Alireza Allafchian
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, 84156, Isfahan, 83111, Iran.
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, 84156, Isfahan, 83111, Iran.
| | - Fathallah Karimzadeh
- Department of Materials Engineering, Isfahan University of Technology, 84156, Isfahan, 83111, Iran
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, 84156, Isfahan, 83111, Iran
| | - Arian Valikhani
- Department of Materials Engineering, Isfahan University of Technology, 84156, Isfahan, 83111, Iran
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, 84156, Isfahan, 83111, Iran
- Department of Natural Resources, Isfahan University of Technology, 84156, Isfahan, 83111, Iran
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Soleimani M, Shirani F, Jalali SAH. Spatial and temporal variation of bacterial population in ambient air particulate matters (PM2.5, PM10 and TSP) of Isfahan city, Iran. JAPH 2022. [DOI: 10.18502/japh.v7i3.10540] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
Abstract
Introduction: Airborne particles are considered as an important indicator of outdoor air quality. Many health problems have been linked to high concentrations of Particulate Matters (PMs) and their associated microorganisms. The aim of this study, therefore, was to investigate the population of bacteria in PMs in various times and locations.
Materials and methods: The PM samples including PM2.5, PM10 and Total Suspended Particles (TSP) were taken from 4 different stations of Isfahan city, Iran on February (cold season) and July (warm season), 2019 using an air sampling pump on culture media. The number of bacterial colonies was counted after 48 h growth in the incubator at 37 oC. The PMs concentration and some morphological characteristics of bacteria were also investigated.
Results: The highest number of bacterial colonies was in TSP followed by PM10 and PM2.5. The bacterial populations at two stations in north and east. of the region in the warm season were higher than in the cold season, and the respective situation in the other two stations at south and center of the city was reversed, which seems somehow to have been the result of the PMs concentration of difference of pollution sources in various locations and seasons.
Conclusion: This study highlights the importance of PMs pollution especially PM2.5 (i.e. the main factor affecting the air quality of the study area) as the carrier of microbial pollution in the air which could adversely affect human health.
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Chahardahmasoumi S, Jalali SAH, Sarvi MN. Tetracycline removal enhancement with Fe-saturated nanoporous montmorillonite in a tripartite adsorption/desorption/photo-Fenton degradation process. Environ Sci Pollut Res Int 2022; 29:57248-57260. [PMID: 35347598 DOI: 10.1007/s11356-022-19518-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2021] [Accepted: 02/25/2022] [Indexed: 06/14/2023]
Abstract
The adsorption and photo-Fenton degradation of tetracycline (TC) over Fe-saturated nanoporous montmorillonite was analyzed. The synthesized samples were characterized using XRD, FTIR, SEM, and XRF analysis, and the adsorption and desorption of TC onto these samples, as well as the antimicrobial activity of TC during these processes, were analyzed at different pH. Initially, a set of adsorption/desorption experiments was conducted, and surprisingly, up to 50% of TC adsorbed was released from Mt structure. Moreover, the desorbed TC had strong antibacterial activity. Then, an acid treatment (for the creation of nanoporous layers) and Fe saturation of the montmorillonite were applied to improve its adsorption and photocatalytic degradation properties over TC. Surprisingly, the desorption of TC from modified montmorillonite was still high up to 40% of adsorbed TC. However, simultaneous adsorption and photodegradation of TC were detected and almost no antimicrobial activity was detected after 180 min of visible light irradiation, which could be due to the photo-Fenton degradation of TC on the modified montmorillonite surface. In the porous structures of modified montmorillonite high, ˙OH radicals were created in the photo-Fenton reaction and were measured using the Coumarin technique. The ˙OH radicals help the degradation of TC as proposed in an oxidation process. Surprisingly, more than 90% of antimicrobial activity of the TC decreased under visible light (after 180 min) when desorbed from nanoporous Fe-saturated montmorillonite compared to natural montmorillonite. To the best of our knowledge, this is the first time that such a high TC desorption rate from an adsorbent with the least residual antimicrobial activity is reported which makes nanoporous Fe-saturated montmorillonite a perfect separation substance of TC from the environment.
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Affiliation(s)
- Shiva Chahardahmasoumi
- Department of Mining Engineering, Isfahan University of Technology, 84156-83111, Isfahan, Iran
| | - Seyed Amir Hossein Jalali
- Department of Natural Resources, Isfahan University of Technology, 84156-83111, Isfahan, Iran
- Institute of Biotechnology and Bioengineering, Isfahan University of Technology, 84156-83111, Isfahan, Iran
| | - Mehdi Nasiri Sarvi
- Department of Mining Engineering, Isfahan University of Technology, 84156-83111, Isfahan, Iran.
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Allafchian A, Fathi M, Jalali SAH. Design of polysaccharidic Aloe veragel incorporated PVA/tetracycline electrospun cell culture scaffolds for biomedical applications. Nanotechnology 2022; 33:295101. [PMID: 35313292 DOI: 10.1088/1361-6528/ac5f97] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2021] [Accepted: 03/21/2022] [Indexed: 06/14/2023]
Abstract
In this study, hybrid nanofibrous 3D scaffolds containingAloe vera(AV), polyvinyl alcohol (PVA) and tetracycline hydrochloride (TCH) are fabricated by electrospinning for cell culture applications. The role of polysaccharides present in AV gel is found to enhance the biocompatibility of the nanofibrous scaffolds. Different combinations of the polymers were selected to produce homogenous nanofibers with favorable mean fiber diameter and tensile strength. The surface morphology of the products was studied by SEM and it is found that the mean fiber diameter is decreased to about 188 nm upon addition of the AV component. The electrospun scaffolds were investigated by FT-IR spectroscopy to reveal the chemical structure of the samples and their crystallinity was studied by XRD. The hydrophilicity of the scaffolds was tested by optical contact angle measurements and their mechanical strength was examined by tensile strength tests. It is found that PVA is the main component contributing the mechanical stability of the scaffold structure. The fabricated scaffolds presented a more pronounced inhibitory effect against Gram-positive bacterial strains ofS. aureusandB. cereus. Cell culture experiments using fibroblast L929 murine cells reveals that the AV/PVA/TCH scaffolds are promising for cell growth and the cells are capable of achieving a proper cell adhesion and proliferation. The cell viability experiment by MTT assay exhibits the contributing role of AV gel to L929 cell viability on the AV/PVA/TCH scaffolds.
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Affiliation(s)
- Alireza Allafchian
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, Isfahan 84156-83111, Iran
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Mohammad Fathi
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
- Department of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran
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Allafchian A, Masmouei HR, Jalali SAH. Design and characterization of Persian gum/polyvinyl alcohol electrospun nanofibrous scaffolds for cell culture applications. Int J Biol Macromol 2022; 209:1402-1409. [PMID: 35461869 DOI: 10.1016/j.ijbiomac.2022.04.139] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2021] [Revised: 04/17/2022] [Accepted: 04/18/2022] [Indexed: 11/28/2022]
Abstract
Biocompatible electrospun nanofiber scaffolds were fabricated in this study using Persian gum (PG) and poly (vinyl alcohol) (PVA) to build an artificial extracellular matrix for cell growth. The preparation procedure involves mixing various ratios of PG/PVA to be electrospun and seeded with L929 fibroblasts. Upon addition of PG up to 60% to the solutions, a 30% decrease to around 240 μs·cm-1 is found in electrical conductivity which is in the range of semi-conductive polymers, whereas the surface tension is increased to around 3%. The fabricated scaffolds were characterized by morphological, chemical, thermal and structural analyses including SEM, FTIR spectroscopy, DSC, XRD, and tensile stress. The results showed that incorporation of 50% PG to the polymer solutions causes the formation of nanofibers with the least bead-shaped segments. All ratios of nanofibers containing PG showed significant biocompatibility with the cultured cells, which is presumably due to the radical scavenging feature of PG. The MTT and SEM analyses demonstrated that the scaffolds containing 50% PG possess the optimal cell compatibility, adhesion and proliferation properties. The fabricated PG/PVA cell culture scaffolds are potentially appropriate for wound dressing and cell culture applications in biomedicine.
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Affiliation(s)
- Alireza Allafchian
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, Isfahan 84156-83111, Iran; Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran.
| | - Hamid Reza Masmouei
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran; Department of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran
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Karimi Jabali M, Allafchian AR, Jalali SAH, Shakeripour H, Mohammadinezhad R, Rahmani F. Design of a pDNA nanocarrier with ascorbic acid modified chitosan coated on superparamagnetic iron oxide nanoparticles for gene delivery. Colloids Surf A Physicochem Eng Asp 2022. [DOI: 10.1016/j.colsurfa.2021.127743] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
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Reza Allafchian A, Reza Vahabi M, Amir Hossein Jalali S, Saeid Mahdavi S, Sepahvand S, Reza Farhang H. Design of Green Silver Nanoparticles Mediated by Ferula ovina Boiss. Extract with Enhanced Antibacterial Effect. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2022.139392] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Albukhaty S, Al-Karagoly H, Allafchian AR, Jalali SAH, Al-Kelabi T, Muhannad M. Production and characterization of biocompatible nanofibrous scaffolds made of β- sitosterolloaded polyvinyl alcohol/tragacanth gum composites. Nanotechnology 2021; 33:085102. [PMID: 34749350 DOI: 10.1088/1361-6528/ac3789] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Accepted: 11/08/2021] [Indexed: 06/13/2023]
Abstract
Electrospun polyvinyl alcohol (PVA) and tragacanth gum (TG) were used to develop nanofibrous scaffolds containing poorly water-solubleβ-Sitosterol (β-S). Different concentrations and ratios of the polymeric composite includingβ-S (10% w v-1) in PVA (8% w v-1) combined with TG (0.5 and 1% w v-1) were prepared and electrospun. The synthesis method includes four electrospinning parameters of solution concentration, feeding rate, voltage, and distance of the collector to the tip of the needle, which are independently optimized to achieve uniform nanofibers with a desirable mean diameter for cell culture. The collected nanofibers were characterized by SEM, FTIR, and XRD measurements. A contact angle measurement described the hydrophilicity of the scaffold. MTT test was carried out on the obtained nanofibers containing L929 normal fibroblast cells. The mechanical strength, porosity, and deterioration of the scaffolds were well discussed. The mean nanofiber diameters ranged from 63 ± 20 nm to 97 ± 46 nm. The nanofibers loaded withβ-S were freely soluble in water and displayed a remarkable biocompatible nature. The cultured cells illustrated sheet-like stretched growth morphology and penetrated the nanofibrous pores of the PVA/β-S/TG scaffolds. The dissolution was related to submicron-level recrystallization ofβ-S with sufficient conditions for culturing L929 cells. It was concluded that electrospinning is a promising technique for poorly water-solubleβ-S formulations that could be used in biomedical applications.
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Affiliation(s)
- Salim Albukhaty
- Department of Basic Sciences, University of Misan, Maysan 62001, Iraq
| | - Hassan Al-Karagoly
- Department of Internal and Preventive Medicine, Veterinary Medicine College, University of Al-Qadisiyah, Diwaniyah 58002, Iraq
| | - Ali Reza Allafchian
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, Isfahan 84156-83111, Iran
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
- Department of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Thair Al-Kelabi
- Directorate of Military Medical Affairs, Ministry of Defense, Baghdad, Iraq
| | - Mustafa Muhannad
- Department of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran
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Allafchian A, Saeedi S, Jalali SAH. Biocompatibility of electrospun cell culture scaffolds made from balangu seed mucilage/PVA composites. Nanotechnology 2021; 33:075302. [PMID: 34757957 DOI: 10.1088/1361-6528/ac3860] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2021] [Accepted: 11/10/2021] [Indexed: 06/13/2023]
Abstract
Synthesis of Balangu (Lallemantia royleana) seed mucilage (BSM) solutions combined with polyvinyl alcohol (PVA) was studied for the purpose of producing 3D electrospun cell culture scaffolds. Production of pure BSM nanofibers proved to be difficult, yet integration of PVA contributed to a facile and successful formation of BSM/PVA nanofibers. Different BSM/PVA ratios were fabricated to achieve the desired nanofibrous structure for cell proliferation. It is found that the optimal bead-free ratio of 50/50 with a mean fiber diameter of ≈180 nm presents the most desirable scaffold structure for cell growth. The positive effect of PVA incorporation was approved by analyzing BSM/PVA solutions through physiochemical assays such as electrical conductivity, viscosity and surface tension tests. According to the thermal analysis (TGA/DSC), incorporation of PVA enhanced thermal stability of the samples. Successful fabrication of the nanofibers is verified by FT-IR spectra, where no major chemical interaction between BSM and PVA is detected. The crystallinity of the electrospun nanofibers is investigated by XRD, revealing the nearly amorphous structure of BSM/PVA scaffolds. The MTT assay is employed to verify the biocompatibility of the scaffolds. The cell culture experiment using epithelial Vero cells shows the affinity of the cells to adhere to their nanofibrous substrate and grow to form continuous cell layers after 72 h of incubation.
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Affiliation(s)
- Alireza Allafchian
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, Isfahan 84156-83111, Iran
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Shiva Saeedi
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
- Department of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran
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Nikforouz B, Allafchian A, Jalali SAH, Shakeripour H, Mohammadinezhad R. Quince seed mucilage coated iron oxide nanoparticles for plasmid DNA delivery. Nanotechnology 2021; 33:075102. [PMID: 34727534 DOI: 10.1088/1361-6528/ac3576] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2021] [Accepted: 11/02/2021] [Indexed: 06/13/2023]
Abstract
This study investigates the potential of iron oxide nanoparticles (Fe3O4) and quince seed mucilage as combined genetic carriers to deliver plasmid DNA (pDNA) through the gastrointestinal system. The samples are characterized by x-ray diffraction (XRD), zeta potential, dynamic light scattering, FT-IR spectroscopy, field emission scanning electron microscopy and vibrating sample magnetometry. The stability of pDNA loading on the nanocarriers and their release pattern are evaluated in simulated gastrointestinal environments by electrophoresis. The XRD patterns reveal that the nanocarriers could preserve their structure during various synthesis levels. The saturation magnetization (Ms) of the Fe3O4cores are 56.48 emu g-1without any magnetic hysteresis. Not only does the loaded pDNA contents experience a remarkable stability in the simulated gastric environment, but also, they could be released up to 99% when exposed to an alkaline environment similar to the intestinal fluid of fish. The results indicate that the synthesized nanoparticles could be employed as efficient low-cost pDNA carriers.
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Affiliation(s)
- Bahar Nikforouz
- Department of Physics, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Alireza Allafchian
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, Isfahan 84156-83111, Iran
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
- Department of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Hamideh Shakeripour
- Department of Physics, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Rezvan Mohammadinezhad
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
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Mohammadinezhad R, Jalali SAH, Farahmand H. Evaluation of different direct and indirect SELEX monitoring methods and implementation of melt-curve analysis for rapid discrimination of variant aptamer sequences. Anal Methods 2020; 12:3823-3835. [PMID: 32676627 DOI: 10.1039/d0ay00491j] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Systematic Evolution of Ligands by Exponential enrichment (SELEX) is an iterative method for in vitro selection of aptamers from a random synthetic oligonucleotide library. Successful retrieving of aptamers by SELEX relies on optimization of various steps including target immobilization, aptamer partitioning, amplification, and ssDNA generation, which all require spending considerable effort and cost. Furthermore, due to the random nature of the initial library, SELEX may redirect toward the selection of low-affinity aptamers that are over-represented in the ssDNA population due to PCR bias. Thus, precise monitoring of the SELEX process is crucial to ensure the selection of target-specific aptamers. In the present study, we investigated the reliability and simplicity of different direct and indirect monitoring methods including UV-Vis spectroscopy, real-time PCR quantification and melt-curve analysis, electrophoretic mobility shift assay (EMSA) and enzyme-linked oligonucleotide assay (ELONA) for selection of DNA aptamers for a protein target. All the examined methods were capable of illustrating the gradual evolution of specific aptamers by the progression of SELEX and showed almost similar results regarding the identification of the enriched round of selection. Moreover, we describe the use of melt-curve analysis in the colony real-time PCR method as a simple, robust, and repeatable tool for pre-sequencing separation of distinct aptamer clones.
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Affiliation(s)
- Rezvan Mohammadinezhad
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran.
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Feizi LK, Zad SS, Jalali SAH, Rafiee H, Jazi MB, Sadeghi K, Kowsar R. Fermented soybean meal affects the ruminal fermentation and the abundance of selected bacterial species in Holstein calves: a multilevel analysis. Sci Rep 2020; 10:12062. [PMID: 32694544 PMCID: PMC7374609 DOI: 10.1038/s41598-020-68778-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2019] [Accepted: 07/01/2020] [Indexed: 11/29/2022] Open
Abstract
The effect of soybean meal (SBM) replacement with fermented SBM (FSBM) on ruminal fermentation and bacterial abundance in Holstein calves was investigated in this study. Thirty nine calves were randomized to: (1) control: 27% SBM + 0% FSBM (FSBM0, n = 13); (2) 18% SBM + 9% FSBM (FSBM9, n = 13); and (3) 13.5% SBM + 13.5% FSBM (FSBM13, n = 13). SBM contained a greater amount of large peptides containing 3 to 10 amino acids (AAs), while FSBM had a greater amount of ammonia nitrogen (NH3-N), free AAs, and small peptides containing 2 to 3 AAs. The calves fed FSBM13 had the lowest acetic acid, NH3-N, and the ratio of acetate to propionate, with the greatest concentration of caproic acid, valeric acid and isovaleric acid in ruminal fluid. Compared to those fed FSBM9 or FSBM13, the calves fed FSBM0 had the greatest proportion of Butyrivibrio fibrisolvens and Ruminococcus albus in rumen fluid. However, the ruminal abundance of Prevotella ruminicola in calves fed FSBM13 was greater than in calves fed FSBM0. Network analysis showed that the abundance of the Ruminococcus albus was associated with large peptides, and butyric acid was correlated with small peptide. Taken together, our findings suggest that FSBM may have the potential to boost calf performance by changing the fermentation products and the relative abundance of some members of the bacterial community in the rumen.
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Affiliation(s)
- Leila Kaviani Feizi
- Department of Animal Science, College of Agriculture, Isfahan University of Technology, 84156-83111, Isfahan, Iran
| | - Sabihe Soleymanian Zad
- Department of Food Science and Technology, College of Agriculture, Isfahan University of Technology, 84156-83111, Isfahan, Iran
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, 84156-83111, 10 Isfahan, Iran
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, 84156-83111, 10 Isfahan, Iran
- Department of Natural Resources, Isfahan University of Technology, 84156-83111, Isfahan, Iran
| | - Hassan Rafiee
- Department of Animal Science, College of Agriculture, Isfahan University of Technology, 84156-83111, Isfahan, Iran
| | - Masoud Boroumand Jazi
- Animal Science Research Department, Isfahan Agricultural and Natural Resources Research and Education Center, 81846-35745, Esfahan, Iran
| | - Khaled Sadeghi
- Department of Animal Science, College of Agriculture, Isfahan University of Technology, 84156-83111, Isfahan, Iran
| | - Rasoul Kowsar
- Department of Animal Science, College of Agriculture, Isfahan University of Technology, 84156-83111, Isfahan, Iran.
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Fazeli L, Golkar P, Mirakhorli N, Jalali SAH, Mohammadinezhad R. Transient expression of the full-length glycoprotein from infectious hematopoietic necrosis virus in bean (Phaseolus vulgaris) leaves via agroinfiltration. Biotechnol Appl Biochem 2020; 68:648-658. [PMID: 32578912 DOI: 10.1002/bab.1975] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2020] [Accepted: 06/20/2020] [Indexed: 11/07/2022]
Abstract
The glycoprotein of infectious hematopoietic necrosis virus (IHNV), the causative agent of acute disease in salmonids, is the only structural protein of the virus that can induce protective immunity in the fish host. Here, the reliability of bean (Phaseolus vulgaris) plant for the production of this viral protein was examined by the transient expression method. Using the syringe agroinfiltration method, leaves of bean plants were transformed with the expression construct encoding the full-length of IHNV glycoprotein (IHNV-G) gene. Furthermore, the transformation efficacy of two infiltration buffers including PBS-A (PBS+acetosyringone) and MMS-A (MES buffer + MgSO4 + sucrose + acetosyringone) was compared. The analysis of mRNA and dot-blot assay confirmed the transcription and translation of IHNV-G protein in bean leaves. Moreover, Western blotting verified the production of intact, full-length (∼57 kDa) IHNV-G protein in the agroinfiltrated plants. Of note, the production level of IHNV-G using MMS-A agroinfiltration buffer was approximately five times higher compared to PBS-A buffer (0.48 vs. 0.1% of total soluble protein), indicating the effect of infiltration buffer on the transient transformation efficiency. The recombinant protein was purified at the final yield of 0.35 μg/g of fresh leaf tissue, using nickel affinity chromatography. The present work is the first report describing the feasibility of the plant expression platform for the production of IHNV-G protein, which can be served as an oral vaccine against IHNV infection.
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Affiliation(s)
- Leila Fazeli
- Department of Plant Biotechnology, Faculty of Agriculture, Shahrekord University, Shahrekord, Iran
| | - Pooran Golkar
- Department of Natural Resources, Isfahan University of Technology, Isfahan, 84156-83111, Iran.,Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran
| | - Neda Mirakhorli
- Department of Plant Biotechnology, Faculty of Agriculture, Shahrekord University, Shahrekord, Iran
| | - Seyed Amir Hossein Jalali
- Department of Natural Resources, Isfahan University of Technology, Isfahan, 84156-83111, Iran.,Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran
| | - Rezvan Mohammadinezhad
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran
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Allafchian AR, Kalani S, Golkar P, Mohammadi H, Jalali SAH. A comprehensive study on
Plantago ovata
/
PVA
biocompatible nanofibers: Fabrication, characterization, and biological assessment. J Appl Polym Sci 2020. [DOI: 10.1002/app.49560] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Ali Reza Allafchian
- Research Institute for Nanotechnology and Advanced Materials Isfahan University of Technology Isfahan Iran
- Research Institute for Biotechnology and Bioengineering Isfahan University of Technology Isfahan Iran
| | - Sahar Kalani
- Research Institute for Nanotechnology and Advanced Materials Isfahan University of Technology Isfahan Iran
| | - Pooran Golkar
- Research Institute for Biotechnology and Bioengineering Isfahan University of Technology Isfahan Iran
- Department of Natural Resources Isfahan University of Technology Isfahan Iran
| | - Hassan Mohammadi
- Research Institute for Nanotechnology and Advanced Materials Isfahan University of Technology Isfahan Iran
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering Isfahan University of Technology Isfahan Iran
- Department of Natural Resources Isfahan University of Technology Isfahan Iran
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15
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Allafchian A, Jalali SAH, Mousavi SE, Hosseini SS. Preparation of cell culture scaffolds using polycaprolactone/quince seed mucilage. Int J Biol Macromol 2020; 155:1270-1276. [DOI: 10.1016/j.ijbiomac.2019.11.096] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2019] [Revised: 11/02/2019] [Accepted: 11/11/2019] [Indexed: 12/20/2022]
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16
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Golkar P, Taghizadeh M, Jalali SAH. Determination of phenolic compounds, antioxidant and anticancer activity of Chrozophora tinctoria accessions collected from different regions of Iran. J Food Biochem 2019; 43:e13036. [PMID: 31495949 DOI: 10.1111/jfbc.13036] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2019] [Revised: 07/15/2019] [Accepted: 08/20/2019] [Indexed: 01/19/2023]
Abstract
The present study was conducted to determine the total phenolics, flavonoids, flavonols, anthocyanin, and carotenoids as well as the antioxidant activity of 10 different Crozophora tinctoria accessions originated from Iran. The highest contents of total phenolics, flavonoids, flavonols, anthocyanin, and carotenoids were detected in C.t (2), C.t (10), C.t (10), C.t (9), and C.t (3) accessions, respectively. The highest antioxidant activities of the samples, evaluated using 1,1-diphenyl-2-picrylhydrazyl and phosphomolibdate assays, were detected in C.t (8) and C.t (3), respectively. The highest phenyl aminolyase activity was observed in C.t (4). Ten phenolic compounds, including quercetin, catechin, ellagic acid, rosmarinic acid, hesperetin, eugenol, hesperidin, carvacrol, thymol, and kaempferol were identified and quantified using high-performance liquid chromatography (HPLC) technique. The best anticancer activity against HeLa cell lines was observed at C.t (8) accession, originated from Qazvin Region. This study confirmed that the C. tinctoria accessions with rich phenolics compounds may be recommended as a novel source of natural antioxidants for future aims in medicinal fields. PRACTICAL APPLICATIONS: According to this findings there was high variation among phenolics compounds of C. tinctoria which is revealed by HPLC analysis. This study identified phenolic compounds with antioxidant and anticancer activity in Iranian accessions of C. tinctoria. With an increase in the rate of cancer disease, superior accessions of C. tinctoria may be recommended as a novel source of natural antioxidants for ethno pharmacological aims as cancer therapy, and also in nutraceutical fields.
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Affiliation(s)
- Pooran Golkar
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, Iran
| | - Marzieh Taghizadeh
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, Iran
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, Iran.,Department of Natural Resources, Isfahan University of Technology, Isfahan, Iran
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17
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Jalali SAH, Mohammadinezhad R, Mohammadi A, Latifian MH, Talebi M, Soleimanin-Zad S, Golkar P, Hemmatzadeh F. Molecular evolution and selection pressure analysis of infectious hematopoietic necrosis virus (IHNV) revealed the origin and phylogenetic relationship of Iranian isolates in recent epidemics in Iran. Virology 2019; 535:45-58. [PMID: 31272011 DOI: 10.1016/j.virol.2019.06.012] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2019] [Revised: 06/19/2019] [Accepted: 06/19/2019] [Indexed: 12/15/2022]
Abstract
Infectious hematopoietic necrosis virus (IHNV) is the causative agent for a lethal salmonid disease. In this study, we surveyed the IHNV's epidemiology, diversity and the origin of infection in Iran. Phylogenetic analysis revealed that Iranian isolates belonged to one of the two lineages of E genogroup. Subsequently, a combination of phylogenetic, antigenic and structural analysis was performed to investigate the evolution of E genogroup lineages. Site-specific analysis of the viral glycoprotein showed different co-evolving and positively selected sites in each lineage. Most of these sites were mapped to the predicted antigenic patches of the glycoprotein. Further characterization revealed E lineages can be differentiated, in part, by specific mutations at positions 91 and 130, which are located in the structurally flexible regions of the glycoprotein, suggesting a key adaptative role for these sites. These data may assist in better monitoring the emerging isolates in regions infected to IHNV from E genogroup.
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Affiliation(s)
- Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran; Department of Natural Resources, Isfahan University of Technology, Isfahan, 84156-83111, Iran.
| | - Rezvan Mohammadinezhad
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran
| | - Ashraf Mohammadi
- Human Viral vaccine Department, Razi Vaccine and Serum Research Institute (RVSRI), Hessark Karadj Agricultural Research, Education and Extension Organization (AREEO), Tehran, Iran
| | - Mohamad Hassan Latifian
- Department of Agricultural Biotechnology, College of Agriculture, Isfahan University of Technology, Isfahan, 8415683111, Iran
| | - Majid Talebi
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran; Department of Agricultural Biotechnology, College of Agriculture, Isfahan University of Technology, Isfahan, 8415683111, Iran
| | - Sabihe Soleimanin-Zad
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran; Department of Food Science and Technology, College of Agriculture, Isfahan University of Technology, Isfahan, Iran
| | - Pouran Golkar
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran
| | - Farhid Hemmatzadeh
- School of Animal and Veterinary Sciences, The University of Adelaide, Roseworthy, SA, Australia
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18
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Golkar P, Kalani S, Allafchian AR, Mohammadi H, Jalali SAH. Fabrication and characterization of electrospun
Plantago major
seed mucilage/PVA nanofibers. J Appl Polym Sci 2019. [DOI: 10.1002/app.47852] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Pooran Golkar
- Research Institute for Biotechnology and BioengineeringIsfahan University of Technology Isfahan 84156–83111 Iran
| | - Sahar Kalani
- Research Institute for Nanotechnology and Advanced MaterialsIsfahan University of Technology Isfahan 84156–83111 Iran
| | - Ali Reza Allafchian
- Research Institute for Nanotechnology and Advanced MaterialsIsfahan University of Technology Isfahan 84156–83111 Iran
| | - Hassan Mohammadi
- Research Institute for Nanotechnology and Advanced MaterialsIsfahan University of Technology Isfahan 84156–83111 Iran
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and BioengineeringIsfahan University of Technology Isfahan 84156–83111 Iran
- Department of Natural ResourcesIsfahan University of Technology Isfahan 84156‐83111 Iran
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19
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Ashouri G, Mahboobi Soofiani N, Hoseinifar SH, Hossein Jalali SA, Morshedi V, Van Doan H, Torfi Mozanzadeh M. Corrigendum to "Combined effects of dietary low molecular weight sodium alginate and Pediococcus acidilactici MA18/5M on growth performance, haematologicaland innate immune responses of Asian sea bass (Lates calcalifer) juveniles" [FSI 79 (2018) 34-41]. Fish Shellfish Immunol 2019; 87:897. [PMID: 30733058 DOI: 10.1016/j.fsi.2019.01.029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Affiliation(s)
- Ghasem Ashouri
- Department of Natural Resources (Fisheries Division), Isfahan University of Technology, Isfahan, 84156-83111, Iran.
| | - Nasrollah Mahboobi Soofiani
- Department of Natural Resources (Fisheries Division), Isfahan University of Technology, Isfahan, 84156-83111, Iran
| | - Seyed Hossein Hoseinifar
- Department of Fisheries, Faculty of Fisheries and Environmental Sciences, Gorgan University of Agricultural Sciences and Natural Resources, Gorgan, Iran
| | - Seyed Amir Hossein Jalali
- Department of Natural Resources (Fisheries Division), Isfahan University of Technology, Isfahan, 84156-83111, Iran; Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran
| | - Vahid Morshedi
- Persian Gulf Research Institute, Persian Gulf University, Bushehr, 7516913798, Iran
| | - Hien Van Doan
- Department of Animal and Aquatic Sciences, Faculty of Agriculture, Chiang Mai University, Chiang Mai, 50200, Thailand
| | - Mansour Torfi Mozanzadeh
- Iran Fisheries Research Organization (IFRO), South Iranian Aquaculture Research Center, Marine Fish Aquaculture Research Station, Sarbandar, Iran
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20
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Akbarzadeh A, Pakravan S, Niroomand M, Abkenar KB, Nimvari ME, Karimi K, Ghazvini A, Jalali SAH. Effect of dietary date seed meal as an alternative carbohydrate source on immune-related gene expression of Pacific white shrimp Penaeus vannamei. Fish Shellfish Immunol 2019; 86:994-998. [PMID: 30592966 DOI: 10.1016/j.fsi.2018.12.053] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Revised: 12/19/2018] [Accepted: 12/23/2018] [Indexed: 06/09/2023]
Abstract
Current study aimed to examine the effect of dietary date seed meal (DSM) as an alternative carbohydrate ingredient on immune-related genes expression of Pacific white shrimp (Penaeus vannamei). A total number of 750 shrimp (4.0 ± 0.1 g) were randomly assigned into five experimental treatments, each with three replicates. Experimental diets contained 0, 50, 100, 150 and 230 g/kg DSM substituted for both wheat and rice flour. Shrimp were fed at a rate of 5% body weight three times daily and the mRNA expression of α2-macroglobulin (α2-M), lipopolysaccharide and beta-1,3-glucan-binding protein (LGBP), integrin β, and peroxinectin (PX) was studied on five shrimp per treatment after 8 weeks feeding trial. The results showed that replacement of DSM up to 100 g/kg in the diet of P. vannamei caused no significant changes in the expression of α2-M and integrin β, however both of these genes showed lower expression in shrimp fed diets containing 150 and 230 g/kg DSM compared to control group. Moreover, no significant differences were observed in the expression of PX and LGBP between shrimp fed diets containing different amounts of DSM and control group. These findings demonstrated that as an inexpensive source of carbohydrate, DSM could be substituted up to 100 g/kg for wheat and rice flour in the diet of farmed shrimp without suppressive effects on the immune status.
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Affiliation(s)
- Arash Akbarzadeh
- Department of Fisheries, Faculty of Marine Science and Technology, University of Hormozgan, P.O. Box: 3995, Bandar Abbas, Iran.
| | - Somayeh Pakravan
- Department of Fisheries, Faculty of Marine Science and Technology, University of Hormozgan, P.O. Box: 3995, Bandar Abbas, Iran
| | - Mohammad Niroomand
- Department of Fisheries, Faculty of Marine Science and Technology, University of Hormozgan, P.O. Box: 3995, Bandar Abbas, Iran
| | - Kobra Babanejad Abkenar
- Department of Fisheries, Faculty of Marine Science and Technology, University of Hormozgan, P.O. Box: 3995, Bandar Abbas, Iran
| | - Masoumeh Eshagh Nimvari
- Department of Fisheries, Faculty of Marine Science and Technology, University of Hormozgan, P.O. Box: 3995, Bandar Abbas, Iran
| | - Kimia Karimi
- Department of Fisheries, Faculty of Marine Science and Technology, University of Hormozgan, P.O. Box: 3995, Bandar Abbas, Iran
| | - Azin Ghazvini
- Islamic Azad University, Lahijan Branch, Lahijan, Iran
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran; Department of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran
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21
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Allafchian AR, Jalali SAH, Mousavi SE. Biocompatible biodegradable polycaprolactone/basil seed mucilage scaffold for cell culture. IET Nanobiotechnol 2018; 12:1108-1113. [DOI: 10.1049/iet-nbt.2018.5071] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023] Open
Affiliation(s)
- Ali Reza Allafchian
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of TechnologyIsfahan 84156‐83111Iran
| | - Seyed Amir Hossein Jalali
- Department of Natural ResourcesIsfahan University of TechnologyIsfahan 84156‐83111Iran
- Research Institute for Biotechnology and Bioengineering, Isfahan University of TechnologyIsfahan 84156‐83111Iran
| | - Seyed Ebrahim Mousavi
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of TechnologyIsfahan 84156‐83111Iran
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22
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Ashouri G, Mahboobi Soofiani N, Hoseinifar SH, Jalali SAH, Morshedi V, Van Doan H, Torfi Mozanzadeh M. Combined effects of dietary low molecular weight sodium alginate and Pediococcus acidilactici MA18/5M on growth performance, haematological and innate immune responses of Asian sea bass (Lates calcalifer) juveniles. Fish Shellfish Immunol 2018; 79:34-41. [PMID: 29738872 DOI: 10.1016/j.fsi.2018.05.009] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2018] [Revised: 04/29/2018] [Accepted: 05/04/2018] [Indexed: 06/08/2023]
Abstract
Six weeks feeding trial was conducted to examine the effects of dietary administration of low molecular weight sodium alginate (LMWSA) and Pediococcus acidilactici MA 18/5M (PA) on humoral and mucosal immune responses, haematological parameters and growth performance, of Lates calcarifer juveniles. Fish (12.0 ± 0.2 g) were fed experimental diets as follows: Control (diet 1, basal diet), 5 g kg-1 LMWSA (diet 2), 10 g kg-1 LMWSA (diet 3), 0.9 × 107 CFU g-1 PA (diet 4), 5 g kg-1 LMWSA + 0.9 × 107 CFU g-1 PA (Diet 5), and 10 g kg-1 LMWSA + 0.9 × 107 CFU g-1 PA (Diet 6). Results indicated a significant (P < 0.05) increase in innate immune parameters including serum lysozyme, bactericidal, hemolytic and respiratory burst activities as well as mucosal immune responses including lysozyme and bactericidal activities, when diet was supplemented with immunostimulants. Moreover, the combined effects of LMWSA with PA resulted in more pronounced immunological responses compared to the control and singular administration. Red and white blood cell counts significantly increased with either singular or combined administration of LMWSA and PA compared with the control group (P < 0.05). The singular administration of PA and combined supplementation of 5 g kg-1 LMWSA with PA significantly increased growth performance and feed intake compared with other experimental groups (P < 0.05). These results indicated that combined administration of LMWSA and PA can be considered as beneficial feed additive and immunostimulant in L. calcarifer juveniles.
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Affiliation(s)
- Ghasem Ashouri
- Department of Fisheries, Faculty of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran.
| | - Nasrollah Mahboobi Soofiani
- Department of Fisheries, Faculty of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Seyed Hossein Hoseinifar
- Department of Fisheries, Faculty of Fisheries and Environmental Sciences, Gorgan University of Agricultural Sciences and Natural Resources, Gorgan, Iran
| | - Seyed Amir Hossein Jalali
- Department of Fisheries, Faculty of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran; Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Vahid Morshedi
- Persian Gulf Research Institute, Persian Gulf University, Bushehr 7516913798, Iran
| | - Hien Van Doan
- Department of Animal and Aquatic Sciences, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200 Thailand
| | - Mansour Torfi Mozanzadeh
- Iran Fisheries Research Organization (IFRO), South Iranian Aquaculture Research Center, Marine Fish Aquaculture Research Station, Sarbandar, Iran
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23
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Allafchian AR, Jalali SAH, Aghaei F, Farhang HR. Green synthesis of silver nanoparticles using Glaucium corniculatum (L.) Curtis extract and evaluation of its antibacterial activity. IET Nanobiotechnol 2018; 12:574-578. [PMID: 30095415 PMCID: PMC8676330 DOI: 10.1049/iet-nbt.2017.0265] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2017] [Revised: 01/10/2018] [Accepted: 01/14/2018] [Indexed: 07/29/2023] Open
Abstract
The metal nanoparticles, due to interesting features such as electrical, optical, chemical and magnetic properties, have been investigated repeatedly. Also, the mentioned nanoparticles have specific uses in terms of their antibacterial activity. The biosynthesis method is more appropriate than the chemical method for producing the nanoparticles because it does not need any special facilities; it is also economically affordable. In the current study, the silver nanoparticles (AgNPs) were obtained by using a very simple and low-cost method via Glaucium corniculatum (L.) Curtis plant extract. The characteristics of the AgNPs were investigated using techniques including: X-ray diffraction, transmission electron microscopy (TEM), scanning electron microscopy (SEM), and Fourier transform infrared spectroscopy. The SEM and TEM images showed that the nanoparticles had a spherical shape, and the mean diameter of them was 53.7 and 45 nm, respectively. The results of the disc diffusion test used for measuring the anti-bacterial activity of the synthesised nanoparticles indicated that the formed nanoparticles possessed a suitable anti-bacterial activity.
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Affiliation(s)
- Ali Reza Allafchian
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, Isfahan 84156-83111, Iran.
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Farzane Aghaei
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Hamid Reza Farhang
- Department of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran
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Zandpour F, Allafchian AR, Vahabi MR, Jalali SAH. Green synthesis of silver nanoparticles with the Arial part of Dorema ammoniacum D. extract by antimicrobial analysis. IET Nanobiotechnol 2018; 12:491-495. [PMID: 29768235 PMCID: PMC8675994 DOI: 10.1049/iet-nbt.2017.0216] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2017] [Revised: 12/16/2017] [Accepted: 12/21/2017] [Indexed: 07/29/2023] Open
Abstract
Silver nanoparticles (SNPs) were synthesised by using the Arial part extract of Dorema ammoniacum D. and characterised by employing UV-visible spectroscopy, Fourier transform infrared spectroscopy and X-ray diffraction techniques. Transmission electron microscopy and field emission scanning electron microscopy were applied to investigate the morphological structure of the bio-synthesised SNPs. The antimicrobial activity of SNPs was studied against Gram positive (Bacillus cereus and Staphylococcus aureus) and Gram-negative (Escherichia coli and Salmonella typhimurium) bacteria by employing the disk diffusion agar process. An extremely antimicrobial effect was observed for SNPs. Utilising D. ammoniacum D. as a mediator for the synthesis of SNPs helped to save time and cost.
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Affiliation(s)
- Fakhte Zandpour
- Department of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Ali Reza Allafchian
- Research Institute for Nanotechnology and Advanced Materials, Isfahan University of Technology, Isfahan 84156-83111, Iran.
| | - Mohammad Reza Vahabi
- Department of Natural Resources, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Seyed Amir Hossein Jalali
- Research Institute for Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
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25
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Akhavan SR, Salati AP, Falahatkar B, Jalali SAH. Erratum to: Changes of vitellogenin and Lipase in captive Sterlet sturgeon Acipenser ruthenus females during previtellogenesis to early atresia. Fish Physiol Biochem 2016; 42:1491. [PMID: 27052423 DOI: 10.1007/s10695-016-0217-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Affiliation(s)
- Sobhan Ranay Akhavan
- Department of Fisheries, Faculty of Marine Natural Resources, Khorramshahr University of Marine Science and Technology, Khorramshahr, Iran
| | - Amir Parviz Salati
- Department of Fisheries, Faculty of Marine Natural Resources, Khorramshahr University of Marine Science and Technology, Khorramshahr, Iran.
| | - Bahram Falahatkar
- Fisheries Department, Faculty of Natural Resources, University of Guilan, P.O. Box 1144, Sowmeh Sara, Guilan, Iran
| | - Seyed Amir Hossein Jalali
- Department of Natural Resources, Isfahan University of Technology, Isfahan, 84156-83111, Iran
- Institute of Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran
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26
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Akhavan SR, Salati AP, Falahatkar B, Jalali SAH. Changes of vitellogenin and Lipase in captive Sterlet sturgeon Acipenser ruthenus females during previtellogenesis to early atresia. Fish Physiol Biochem 2016; 42:967-978. [PMID: 26732070 DOI: 10.1007/s10695-015-0189-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2015] [Accepted: 12/23/2015] [Indexed: 06/05/2023]
Abstract
Plasma chemistry, lipid metabolism and vitellogenin gene expression of captive Sterlet sturgeon Acipenser ruthenus were studied in different maturity stages. A total of 32 fish were sampled, and maturity stages were identified on the basis of histological criteria and direct observation. Females were classified to four groups: previtellogenic, vitellogenic, post-vitellogenic, and atresia. Blood, gonad and liver tissue samples were taken through non-lethal biopsy. Our results showed that plasma levels of glucose, cholesterol, triacylglycerol, high-density lipoprotein, low-density lipoprotein, very low-density lipoprotein, calcium, phosphorus, alkaline phosphatase activity, albumin and total protein increased during ovarian development and were highest at post-vitellogenic stage. The lowest amounts in atresia stage demonstrate that lipid and energy imbalance was related to reabsorption and digestion of the yolk. These results suggested that the VLDL was the main plasma lipoprotein component of Sterlet. We determined that lipoprotein lipase and hepatic lipase activity increased during vitellogenesis process which suggested the role of lipase enzymes in regulating blood lipid metabolism. RT-PCR analysis indicates that Vitellogenin (VTG) mRNA could be detected both in livers and ovaries of female Sterlet. Throughout the study, the expression level of VTG gene showed an increase both in ovaries and in livers reaching its peak at late vitellogenesis stage. This strongly indicated a relation between VTG mRNA and ovarian development.
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Affiliation(s)
- Sobhan Ranay Akhavan
- Department of Fisheries, Faculty of Marine Natural Resources, Khorramshahr University of Marine Science and Technology, Khorramshahr, Iran
| | - Amir Parviz Salati
- Department of Fisheries, Faculty of Marine Natural Resources, Khorramshahr University of Marine Science and Technology, Khorramshahr, Iran.
| | - Bahram Falahatkar
- Fisheries Department, Faculty of Natural Resources, University of Guilan, P.O. Box 1144, Sowmeh Sara, Guilan, Iran
| | - Seyed Amir Hossein Jalali
- Institute of Biotechnology and Bioengineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran
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Allafchian AR, Jalali SAH. Synthesis, characterization and antibacterial effect of poly(acrylonitrile/maleic acid)–silver nanocomposite. J Taiwan Inst Chem Eng 2015. [DOI: 10.1016/j.jtice.2015.05.015] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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28
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Schyth BD, Bela-ong DB, Jalali SAH, Kristensen LBJ, Einer-Jensen K, Pedersen FS, Lorenzen N. Two Virus-Induced MicroRNAs Known Only from Teleost Fishes Are Orthologues of MicroRNAs Involved in Cell Cycle Control in Humans. PLoS One 2015; 10:e0132434. [PMID: 26207374 PMCID: PMC4514678 DOI: 10.1371/journal.pone.0132434] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2015] [Accepted: 06/16/2015] [Indexed: 12/13/2022] Open
Abstract
MicroRNAs (miRNAs) are ~22 base pair-long non-coding RNAs which regulate gene expression in the cytoplasm of eukaryotic cells by binding to specific target regions in mRNAs to mediate transcriptional blocking or mRNA cleavage. Through their fundamental roles in cellular pathways, gene regulation mediated by miRNAs has been shown to be involved in almost all biological phenomena, including development, metabolism, cell cycle, tumor formation, and host-pathogen interactions. To address the latter in a primitive vertebrate host, we here used an array platform to analyze the miRNA response in rainbow trout (Oncorhynchus mykiss) following inoculation with the virulent fish rhabdovirus Viral hemorrhagic septicaemia virus. Two clustered miRNAs, miR-462 and miR-731 (herein referred to as miR-462 cluster), described only in teleost fishes, were found to be strongly upregulated, indicating their involvement in fish-virus interactions. We searched for homologues of the two teleost miRNAs in other vertebrate species and investigated whether findings related to ours have been reported for these homologues. Gene synteny analysis along with gene sequence conservation suggested that the teleost fish miR-462 and miR-731 had evolved from the ancestral miR-191 and miR-425 (herein called miR-191 cluster), respectively. Whereas the miR-462 cluster locus is found between two protein-coding genes (intergenic) in teleost fish genomes, the miR-191 cluster locus is found within an intron of a protein-coding gene (intragenic) in the human genome. Interferon (IFN)-inducible and immune-related promoter elements found upstream of the teleost miR-462 cluster locus suggested roles in immune responses to viral pathogens in fish, while in humans, the miR-191 cluster functionally associated with cell cycle regulation. Stimulation of fish cell cultures with the IFN inducer poly I:C accordingly upregulated the expression of miR-462 and miR-731, while no stimulatory effect on miR-191 and miR-425 expression was observed in human cell lines. Despite high sequence conservation, evolution has thus resulted in different regulation and presumably also different functional roles of these orthologous miRNA clusters in different vertebrate lineages.
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Affiliation(s)
- Brian Dall Schyth
- National Veterinary Institute, Technical University of Denmark, Frederiksberg C, Denmark
| | - Dennis Berbulla Bela-ong
- National Veterinary Institute, Technical University of Denmark, Frederiksberg C, Denmark
- Fish Health Section, Department of Animal Science, Aarhus University, Aarhus N, Denmark
| | | | - Lasse Bøgelund Juel Kristensen
- National Veterinary Institute, Technical University of Denmark, Frederiksberg C, Denmark
- Department of Molecular Biology and Genetics, University of Aarhus, Aarhus C, Denmark
| | | | - Finn Skou Pedersen
- Department of Molecular Biology and Genetics, University of Aarhus, Aarhus C, Denmark
| | - Niels Lorenzen
- Fish Health Section, Department of Animal Science, Aarhus University, Aarhus N, Denmark
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