The relationship of MITF gene expression and promoter methylation with plumage colour in quail

1. This study focused on the relationship between MITF mRNA expression and plumage colour in quail and the effect of promoter methylation on the expression of MITF mRNA.2. The CDS region of MITF mRNA was cloned by RT-PCR, followed by DNA sequencing. The RT-qPCR method was used to analyse the expression levels of MITF mRNA in dorsal skin tissue in Korean quail and Beijing white quail. The promoter region of the MITF gene was cloned, and the CpG island was predicted by the CpGplot program. The methylation levels of the CpG island were analysed using BS-PCR technology.3. Quail MITF mRNA contains a 1,476 bp complete ORF, which encodes a 492 amino acid residue protein. The MITF protein has no signal peptide or transmembrane region. The expression of MITF mRNA in dorsal tissue of Korean quail was significantly higher than that in Beijing white quail (p < 0.01). Abundant cis-elements and a 346 bp CpG island were found in the promoter region of the MITF gene. The average methylation level of the CpG island was 22 (22%) in Korean quail, and 46 (30%) in Beijing white quail (p < 0.05).4. The hypermethylation of the MITF gene promoter region in Beijing white quail resulted in a decrease in expression level, which was related to white feather colour.

Dorsal and Ventral Plumage Coloration Evolve as Distinct Modules with Different Environmental Correlations

AbstractMany animals exhibit contrast between their dorsal coloration and their ventral coloration. If selection acts differently on dorsal versus ventral coloration, ancestral covariance between these traits should break down, eventually leading to independent modules of trait evolution. Here, we compare the evolution of feather color across body regions for a clade of Australasian songbirds (Meliphagoidea). We find evidence for three modules of covarying color regions. Among these modules, ventral feathers evolve with high lability, evolving at three times the rate of dorsal plumage and 20 times the rate of flight feathers. While both dorsal plumage and ventral plumage are darker in areas with more precipitation and vegetation, we find that dorsal plumage is twice as similar to colors in satellite photos of background substrates. Overall, differential selection on ventral and dorsal colors likely maintains these as distinct modules over evolutionary timescales-a novel explanation for dorsoventral contrast in pigmentation.

The evolution of multiple colour mechanisms is correlated with diversification in sunbirds (Nectariniidae)

How and why certain groups become speciose is a key question in evolutionary biology. Novel traits that enable diversification by opening new ecological niches are likely important mechanisms. However, ornamental traits can also promote diversification by opening up novel sensory niches and thereby creating novel inter-specific interactions. More specifically, ornamental colours may enable more precise and/or easier species recognition, and may act as key innovations by increasing the number of species-specific patterns and promoting diversification. While the influence of colouration on diversification is well-studied, the influence of the mechanisms that produce those colours (e.g. pigmentary, nanostructural) is less so, even though the ontogeny and evolution of these mechanisms differ. We estimated a new phylogenetic tree for 121 sunbird species and combined colour data of 106 species with a range of phylogenetic tools to test the hypothesis that the evolution of novel colour mechanisms increases diversification in sunbirds, one of the most colourful bird clades. Results suggest that (1) the evolution of novel colour mechanisms expands the visual sensory niche, increasing the number of achievable colours. (2) Structural colouration diverges more readily across the body than pigment-based colouration, enabling an increase in colour complexity. (3) Novel colour mechanisms might minimize trade-offs between natural and sexual selection such that colour can function both as camouflage and conspicuous signal. (4) Despite structural colours being more colourful and mobile, only melanin-based colouration is positively correlated with net diversification. Together, these findings explain why colour distances increase with increasing number of sympatric species, even though packing of colour space would predict otherwise.

Stabilizing selection on a plumage-based foraging adaptation: hooded warblers with average-sized white tail spots live longer

Avian flush-pursuit insectivores typically use contrasting white plumage patches in their tails or wings to startle potential prey. Although experimental evidence indicates that the extent of white has been fine-tuned by natural selection to optimize foraging performance, the hypothesis that within-population plumage variation directly influences survival or lifetime reproduction and is subject to stabilizing selection has not been tested. Here, I provide such a test using data collected as part of a 14-year study of a colour-ringed breeding population of the hooded warbler (Setophaga citrina), a migratory flush-pursuit insectivore that shows inter-individual variation in the extent of white in the tail that is highly repeatable across moults and probably heritable. As expected under stabilizing selection, warblers with average-sized white tail patches achieved significantly higher apparent long-term survival than individuals with either a lesser or greater extent of white in the tail. Evidence of stabilizing selection was especially strong in males, an observation that is probably related to pronounced sexual habitat segregation on the wintering range. My results provide infrequently observed evidence of stabilizing selection operating in a natural population, and also illustrate how stabilizing selection can act on avian plumage traits outside the context of sexual and social signalling.

Adaptive and non-adaptive convergent evolution in feather reflectance of California Channel Islands songbirds

Convergent evolution is widely regarded as a signature of adaptation. However, testing the adaptive consequences of convergent phenotypes is challenging, making it difficult to exclude non-adaptive explanations for convergence. Here, we combined feather reflectance spectra and phenotypic trajectory analyses with visual and thermoregulatory modelling to test the adaptive significance of dark plumage in songbirds of the California Channel Islands. By evolving dark dorsal plumage, island birds are generally less conspicuous to visual-hunting raptors in the island environment than mainland birds. Dark dorsal plumage also reduces the energetic demands associated with maintaining homeothermy in the cool island climate. We also found an unexpected pattern of convergence, wherein the most divergent island populations evolved greater reflectance of near-infrared radiation. However, our heat flux models indicate that elevated near-infrared reflectance is not adaptive. Analysis of feather microstructure suggests that mainland-island differences are related to coloration of feather barbs and barbules rather than their structure. Our results indicate that adaptive and non-adaptive mechanisms interact to drive plumage evolution in this system. This study sheds light on the mechanisms driving the association between dark colour and wet, cold environments across the tree of life, especially in island birds.

Urbanisation impacts plumage colouration in a songbird across Europe: Evidence from a correlational, experimental and meta-analytical approach

Urbanisation is accelerating across the globe, transforming landscapes, presenting organisms with novel challenges, shaping phenotypes and impacting fitness. Urban individuals are claimed to have duller carotenoid-based colouration, compared to their non-urban counterparts, the so-called 'urban dullness' phenomenon. However, at the intraspecific level, this generalisation is surprisingly inconsistent and often based on comparisons of single urban/non-urban populations or studies from a limited geographical area. Here, we combine correlational, experimental and meta-analytical data on a common songbird, the great tit Parus major, to investigate carotenoid-based plumage colouration in urban and forest populations across Europe. We find that, as predicted, urban individuals are paler than forest individuals, although there are large population-specific differences in the magnitude of the urban-forest contrast in colouration. Using one focal region (Malmö, Sweden), we reveal population-specific processes behind plumage colouration differences, which are unlikely to be the result of genetic or early-life conditions, but instead a consequence of environmental factors acting after fledging. Finally, our meta-analysis indicates that the urban dullness phenomenon is well established in the literature, for great tits, with consistent changes in carotenoid-based plumage traits, particularly carotenoid chroma, in response to anthropogenic disturbances. Overall, our results provide evidence for uniformity in the 'urban dullness' phenomenon but also highlight that the magnitude of the effect on colouration depends on local urban characteristics. Future long-term replicated studies, covering a wider range of species and feeding guilds, will be essential to further our understanding of the eco-evolutionary implications of this phenomenon.

How are they really doing? Animal welfare on organic laying hen farms in terms of health and behaviour

1. The present study describes the current welfare situation on commercial organic laying hen farms in Sweden in terms of indoor environment, bird health and behaviour.2. Organic laying hen farms (n = 11) in Sweden were visited for one day each. The farm visits were performed at the end of lay and involved farmer interviews, indoor environment assessments, behavioural observations and tests and clinical examinations in one flock per farm.3. In 95% of all human avoidance distance test trials performed, the hens distanced themselves from the observer before the test was completed. Median number of birds per flock approaching during a novel object test (n = 4 trials per flock) was 2 (0-9). These results may indicate a high level of fear of humans and general fearfulness among the hens.4. Plumage damage was especially prevalent and most severe on the breast and belly, tail and wings, with median prevalence of moderate-severe damage of 96% (84-100), 96% (72-100) and 98% (94-100), respectively. Median prevalence of keel bone deviations was 67% (32-84) with 3% fractures (0-8). Median prevalence of breast skin lesions was 57% (10-74). There was a significant positive association between breast skin lesions and keel bone deviations (P = 0.02) and foot pad hyperkeratosis (P < 0.001). Median prevalence of severe hyperkeratosis was 33% (8-96), with prevalence being significantly lower where litter depth was thicker (P = 0.003). More dust bathing events were observed in flocks where litter depth was thicker (P = 0.007).5. The present study contributes with updated knowledge of laying hen welfare on organic farms in Sweden. The results confirm the findings of previous on-farm studies, demonstrating that important issues, including keel bone damage and severe feather pecking, remain in need of attention to ensure the welfare of laying hens in future commercial egg production.

A genome-wide scan to identify signatures of selection in Lueyang black -bone chicken

Lueyang black-bone chicken is a domestic breed in China. The genetic mechanism of the formation of important economic traits of this breed has not been studied systematically. Therefore, in this study, whole genome resequencing was used to systematically analyze and evaluate the genetic diversity of the black-feather and white-feather populations, and to screen and identify key genes related to phenotypes. The results of principal component analysis and population structure analysis showed that Lueyang black-feathered chickens and white-feathered chickens could be divided into 2 subgroups, and the genetic diversity of black-feathered chicken was richer than that of white-feathered chickens. Linkage disequilibrium analysis also showed that the selection intensity of black-feathered chickens was lower than for white-feathered chickens, which was mainly due to the small population size of white-feathered chickens and a certain degree of inbreeding. Fixation index (F_ST) analysis revealed that the candidate genes related to feather color traits were G-gamma, FA, FERM, Kelch, TGFb, Arf, FERM, and melanin synthesis-related gene tyrosinase (TYR). Based on Kyoto Encyclopedia of Genes and Genomes enrichment analysis, Jak-STAT, mTOR, and TGF-β signaling pathways were mainly related to melanogenesis and plume color. The findings of this study supported important information for the evaluation and protection of chicken genetic resources and help to analyze the unique genetic phenotypes such as melanin deposition and feather color of Lueyang black-bone chicken. Additionally, it could provide basic research data for the improvement and breeding of Lueyang black-bone chicken with characteristic traits.

Pressure for rapid and accurate mate recognition promotes avian-perceived plumage sexual dichromatism in true thrushes (genus: Turdus)

Ecological conditions limiting the time to find a compatible mate or increasing the difficulty in doing so likely promote the evolution of traits used for species and mate recognition. In addition to interspecific character displacement signalling species identity, intraspecific traits that signal an individual's sex and breeding status reduce the challenge of identifying a compatible conspecific mate and should be more common in migratory rather than sedentary species, species with shorter breeding seasons and species breeding under high sympatry with many closely related heterospecifics. Here, we tested this recognition hypothesis for promoting plumage sexual dichromatism in the true thrushes (Turdus spp.), a large and diverse genus of passerine birds. We used receptor-noise limited models of avian vision to quantify avian-perceived chromatic and achromatic visual contrasts between male and female plumage patches and tested the influence of breeding season length, spatial distribution and sympatry with other Turdus species on plumage dichromatism. As predicted, we found that (1) true thrush species with migratory behaviour have greater plumage sexual dichromatism than non-migratory species, (2) species with longer breeding seasons have less plumage sexual dichromatism, and (3) greater numbers of Turdus thrush species breeding in sympatry is associated with more plumage sexual dichromatism. These results suggest that social recognition systems, including species and mate recognition, play a prominent role in the evolution of plumage sexual dichromatism in true thrushes.

Association of MC1R variation and plumage color diversity of Nigerian domestic pigeon (Columba livia domestica)

OBJECTIVES

Domestic pigeons (Columba livia domestica) have diverse plumage pigmentations. Melanocortin 1 receptor (MC1R) gene variation has been correlated with color traits. The association between MC1R and plumage coloration in African domestic pigeons is yet to be investigated.

MATERIALS AND METHODS

Herein, we report the relationships between single nucleotide polymorphisms (SNPs) in MC1R and plumage of 35 domestic pigeons from Nigeria with 4 different plumage phenotypes plus 37 published MC1R sequences from France (n = 14) and Russia (n = 11).

RESULTS

We obtained 14 SNP sites among 72 individuals. Missense mutations C206T (Ser69Leu) and G253A (Val85Met) were observed in 16 and 8 Nigerian pigeons, respectively. The chi-squared test (p < 0.05) for C206T, G253A, and A520G has the advantage of homozygous genotypes CC, GG, and AA, respectively. The association of C206T loci showed the advantage of CC genotype in ash-red, spread, and white pigeons, and TT in blue-bar, spread, and white feather pigeons. For G253A and A520G loci, GG and AA were dominant in all plumages except for genotype AA in G253A, which was prominent in ash-red, spread, and white plumages. The three SNPs were assigned to seven haplotypes. The median-joining network revealed 20 haplotypes, including 5 in Nigeria and 2 shared.

CONCLUSION

This study provides an insight into the association of MC1R variation and plumage diversity in Nigerian domestic pigeons. However, due to the limitation of the current data, we could not make further conclusions; this necessitates the need for more genomics studies on Nigerian pigeons.

Influence of different dietary fibre contents in the diet on feather pecking, locomotor activity and performance of laying hens

1. This trial investigated the effects of three diets with increasing proportions of insoluble dietary fibre (3%, 6% and 9%) but with similar metabolisable energy on behaviour, plumage condition and laying performance of Lohmann Tradition hens.2. At 21 weeks of age, four groups of 20 hens each (= four replicates/treatment) were randomly assigned to one of the three feeding treatments and exclusively fed with their assigned feed until the end of the laying period.3. Severe feather pecking decreased with increasing fibre content (3%: 0.78 pecks/30min/hen, 6%: 0.31, 9%: 0.12; P<0.0001). In contrast, no effect of fibre was seen for gentle feather pecking (P=0.19) and aggressive pecking (P=0.84). The number of free feathers in the littered area increased with increasing fibre content (3%: 0.06 feathers/625cm²/hen, 6%: 0.09, 9%: 0.16; P=0.0074). Over time plumage quality worsened in all hens, but was consistently better with increasing fibre content (fibre content x sampling period; P<0.0001). Locomotor activity was similar across all treatments, except for a slight decrease in hens fed the 3% fibre diet at the end of the experimental period. No effect of fibre content on hens' weight (P=0.75) was detectable. Similarly, performance did not differ between hens fed varying dietary fibre.4. The results supported the assumption that increasing dietary fibre helps to reduce the risk for the occurrence of feather pecking in laying hens, i.e., improve well-being, while having no negative effects on performance.

Plumage damage and back skin lesions in laying hens with untrimmed beak depend on rearing of pullets and genetics

1. Within a triennial project, 34 layer flocks with untrimmed beaks were examined regularly throughout the laying period to broaden knowledge on the occurrence and development of severe feather pecking and cannibalism, as well as on factors influencing this non-desirable behaviour.2. Flocks involved 850 to 27,183 hens of seven different genetics, kept in a barn or on free-range systems. Damage to the plumage and skin was assessed in individual hens during each visit and their body weights recorded. Correlations smaller than 0.8 between different body areas for damage indicated the necessity to consider them separately. Accounting for the risk of bias due to unevenly distributed factors, regression functions were used to assess associations between pecking damage, losses and performance, housing and management conditions. In addition, temporal pattern of pecking damage for flocks with severe, medium and little damage was modelled using these functions.3. As expected, plumage damage increased with age, whereas the development of skin lesions was less consistent. From 30 weeks of age, pecking damage on the back increased remarkably in flocks with the most severe scores compared to those with medium and little damage, especially during the later laying period. Associations were found between pecking damage on the back of hens with plumage quality of pullets when entering the layer house (point of lay). Damage to the vent/cloacal region was more pronounced in white compared to brown layers. However, this did not deny the importance of factors not significant in this study.4. The study identified factors related to genetics and status of hens when entering the layer house, particularly the influence of the rearing phase.

Ecology and behavior predict an evolutionary trade-off between song complexity and elaborate plumages in antwrens (Aves, Thamnophilidae)

The environment can impose constraints on signal transmission properties such that signals should evolve in predictable directions (Sensory Drive Hypothesis). However, behavioral and ecological factors can limit investment in more than one sensory modality leading to a trade-off in use of different signals (Transfer Hypothesis). In birds, there is mixed evidence for both sensory drive and transfer hypothesis. Few studies have tested sensory drive while also evaluating the transfer hypothesis, limiting understanding of the relative roles of these processes in signal evolution. Here, we assessed both hypotheses using acoustic and visual signals in male and female antwrens (Thamnophilidae), a species-rich group that inhabits diverse environments and exhibits behaviors, such as mixed-species flocking, that could limit investment in different signal modalities. We uncovered significant effects of habitat (sensory drive) and mixed-species flocking behavior on both sensory modalities, and we revealed evolutionary trade-offs between song and plumage complexity, consistent with the transfer hypothesis. We also showed sex- and trait-specific responses in visual signals that suggest both natural and social selection play an important role in the evolution of sexual dimorphism. Altogether, these results support the idea that environmental (sensory drive) and behavioral pressures (social selection) shape signal evolution in antwrens.

Male-like female morphs in hummingbirds: the evolution of a widespread sex-limited plumage polymorphism

Differences in the way males and females look or behave are common in animals. However, discrete variation within sexes (sex-limited polymorphism) also occurs in several vertebrate and invertebrate lineages. In birds, female-limited polymorphism (FLP) in which some females resemble males in coloration is most prominent in hummingbirds, a group known for its morphological and behavioural sexual dimorphism. Yet, it remains unclear whether this intrasexual colour variation in hummingbirds arises through direct selection on females, or indirectly as a non-adaptive byproduct resulting from selection on males. Here, we analysed specimens from more than 300 hummingbird species to determine the extent, evolutionary history and function of FLP. We found that FLP evolved independently in every major clade and occurs in nearly 25% of hummingbird species. Using phylogenetically informed analyses, we rejected non-adaptive hypotheses that FLP is the result of indirect selection or pleiotropy across species. Instead, FLP is associated with ecology, migratory status, and marginally with social dominance, suggesting a socioecological benefit to females. Ultimately, we show that FLP is not only widespread in hummingbirds and likely adaptive, but may also be useful for understanding the evolution of female ornamentation in systems under strong sexual selection.

Comparison of Changes in the Plumage and Body Condition, Egg Production, and Mortality of Different Non-Beak-Trimmed Pure Line Laying Hens during the Egg-Laying Period

Simple Summary

The spread of both alternative and non-cage laying hen housing systems and the more forceful European refusal of beak trimming generate new problems in commercial egg production. The hybrid layers, which have been genetically selected under cage housing conditions for more decades, have lively temperament, are more susceptible for feather pecking and, in more cases, they are expressly aggressive, which led to permanent conflict situations in the large group keeping systems. Therefore, the omission of beak trimming could lead to an increased risk for feather pecking and consequently to a risk for increased mortality in the hen house by using the current commercial layers. Therefore, changes in the live weight, plumage and body condition, egg production, and mortality of different TETRA pure line non-beak-trimmed laying hens were compared during the egg-production period in our study, where the plumage condition was considered as an indicator trait for feather pecking. Our results confirm the findings of former studies that the genetic background of the hens is an important factor impacting feather pecking and suggest that breeding for an improved plumage condition might be a potential way to improve animal welfare in non-beak-trimmed layer flocks.

Abstract

The experiment was carried out with altogether 1740 non-beak-trimmed laying hens, which originated from Bábolna TETRA Ltd., representing two different types (Rhode Island Red (RIR) and Rhode Island White (RIW)) and four different lines (Lines 1–2: RIR, Lines 3–4: RIW). The plumage and body condition of randomly selected 120 hens (30 hens/line) was examined at 20, 46, and 62 weeks of age. The egg production and the mortality of the sampled hens were recorded daily. Based on the results, it was established that the lines differ clearly in most of the examined traits. It was also pointed out that injurious pecking of the hens resulted not only in damages in the plumage but also in the body condition. The results obviously demonstrated that the highest egg production and the lowest mortality rate were reached by those hens, which had the best plumage and body condition. Because the occurrence of injurious pecking seems to depend on the genetic background, selection of the hens (lines, families, individuals) for calm temperament will be very important in the future in order to maintain the high production level in non-beak-trimmed layer flocks.

Relationship between Range Use and Fearfulness in Free-Range Hens from Different Rearing Enrichments

Inconsistency between the environments of indoor pullet rearing and adult outdoor housing may increase the fearfulness in free-range hens. Rearing enrichments and/or range use may reduce adult fearfulness. Hy-Line Brown^® chicks (n = 1700) were reared inside across 16 weeks with three enrichment treatments: weekly changing novel objects, custom-designed perching/navigation structures, or no additional enrichments. Pullets were transferred to a free-range system at 16 weeks of age, with range access provided from 25 weeks. At 62 weeks, 135 hens were selected from the three rearing treatments and two ranging groups (indoor: no ranging and outdoor: daily ranging) based on individual radio-frequency identification tracking. Individual behavioural tests of tonic immobility, emergence, open field, and novel object (pen level) were carried out on hens. Spectrograms of vocalisations were analysed for the open field test, as well as computer vision tracking of hen locomotion. The results showed few effects of rearing treatments, with outdoor rangers less fearful than indoor hens. The latency to step in the open field test negatively correlated with hen feather coverage. These results show that individual variation in ranging behaviours is present even following rearing enrichment treatments, and subsequent range use might be an indicator of bird fearfulness.

Sympatry drives colour and song evolution in wood-warblers (Parulidae)

Closely related species often exhibit similarities in appearance and behaviour, yet when related species exist in sympatry, signals may diverge to enhance species recognition. Prior comparative studies provided mixed support for this hypothesis, but the relationship between sympatry and signal divergence is likely nonlinear. Constraints on signal diversity may limit signal divergence, especially when large numbers of species are sympatric. We tested the effect of sympatric overlap on plumage colour and song divergence in wood-warblers (Parulidae), a speciose group with diverse visual and vocal signals. We also tested how number of sympatric species influences signal divergence. Allopatric species pairs had overall greater plumage and song divergence compared to sympatric species pairs. However, among sympatric species pairs, plumage divergence positively related to the degree of sympatric overlap in males and females, while male song bandwidth and syllable rate divergence negatively related to sympatric overlap. In addition, as the number of species in sympatry increased, average signal divergence among sympatric species decreased, which is likely due to constraints on warbler perceptual space and signal diversity. Our findings reveal that sympatry influences signal evolution in warblers, though not always as predicted, and that number of sympatric species can limit sympatry's influence on signal evolution.

A meta-analysis on the effect of environmental enrichment on feather pecking and feather damage in laying hens

Feather pecking (FP) is a significant issue in laying hens, which impacts societal acceptance of poultry farming, farm productivity, and bird welfare. Environmental enrichment-modifications of the environment to stimulate biological functioning and psychological well-being of animals-is one management strategy farmers can use to mitigate FP. However, inconsistent results of environmental enrichment are reported across studies questioning its value. A meta-analysis was used to determine the effect of environmental enrichment on FP and feather damage (FD) in laying hens. A systematic review of published literature from 4 databases resulted in 23 publications that met inclusion criteria. Feather pecking and FD outcomes were standardized between studies using different scoring systems. Driving variables included the presence of enrichment, production period when the enrichment started, housing type, beak trimming, bird strain, and age of the birds when FP and FD was measured. Considering the experiment as a random effect, linear mixed model analysis was used in a 2-step approach, whereby variables with a P < 0.30 in univariate analysis were included within the subsequent multivariate analysis. Variables with P < 0.05 in the multivariate analysis were retained in the final models. Model selection and evaluation were based on corrected Akaike information criteria, the root mean square prediction errors, and concordance correlation coefficients. A higher frequency of FP was observed in flocks lacking enrichment (P < 0.001), with increased age (P = 0.001), and in cage housing systems (P = 0.002). Similarly, FD increased in flocks lacking enrichment (P = 0.018), with increased age (P < 0.001), in the absence of beak trimming (P = 0.001) and in cage housing systems (P = 0.042). This meta-analysis confirmed the effectiveness of environmental enrichment in reducing FP and FD. Nevertheless, the modest ability of enrichment to dampen FD (-0.14 ± 0.06, 1-4 scale) suggests that other management strategies must be implemented in conjunction with environmental enrichment to successfully manage FP and resulting FD.

Bird Health, Housing and Management Routines on Swedish Organic Broiler Chicken Farms

Slower-growing broilers on organic farms have replaced fast-growing hybrids to increase bird welfare. Due to limited knowledge of broiler welfare and management on organic farms in Sweden, the study aim was to gather information regarding health, housing and management routines, in order to describe the current situation on these. Farm visits performed in 2018 included 8 out of 12 established organic farms, on which either Rowan Ranger or HubbardJA57/HubbardJA87 were reared. Chickens in the observed flocks were 55 ± 6 (44-62) days of age. Observations included farmer interviews, indoor environment assessments, clinical examinations and gait scoring. Clinical examinations revealed no severe remarks, however minor to moderate plumage dirtiness, food pad dermatitis and hock burns were found in 47%, 21% and 13% of the birds, respectively. Although no severe walking impairments were observed, minor to moderate gait abnormalities were seen in two-thirds of the birds. Gait in birds assessed outdoors was significantly better than in birds observed indoors. Body weight uniformity was low in all flocks. This study provides increased knowledge of certain chicken health and welfare aspects, housing and management on Swedish organic farms. Future research should further investigate important aspects related to bird welfare, such as the high mortality rates observed.

Effects of edible environmental enrichments during the rearing and laying periods in a littered aviary-Part 1: integument condition in pullets and laying hens

Severe feather pecking is a damaging allopecking behavior in pullets and laying hens which was found to be associated with multiple factors. The aim of this study was to investigate whether the occurrence of feather pecking could be reduced by additional environmental enrichment materials (EM; pecking stones and hard-pressed alfalfa bales) in a littered housing system. In total 4,000 pullets (2000 Lohmann Brown classic [LB] and 2000 Lohmann Selected Leghorn classic [LSL]) were reared in an aviary system until week 18, and 1,320 remaining laying hens were kept thereafter, from week 19 to 48. During rearing, half of the compartments were permanently supplied with enrichment materials, while the other half did not receive any EM. After transferring to the laying hens' stable, we examined the hens under four treatment variants: V1 - no EM over the entire study period; V2 - rearing period with and laying period without EM; V3 - rearing period without and laying period with EM; V4 - EM over the entire study period. The integument condition (i.e. beak protrusion, beak fissures, plumage condition, skin and toe injuries, and foot pad dermatitis) was scored in weeks 2, 4, 6, 10, 14, 18 (rearing) and 25, 30, 40, and 48 (laying period). At the end of the study (week 48), lower plumage damage was observed in the variants provided with EM during rearing (V2 and V4) compared to the other two variants (V1 and V3; P < 0.001). Skin injuries were less prevalent in week 40 in hens with access to EM during rearing (V2 and V4) than the other variants (V1 and V3) within LSL (P < 0.001), and in week 48 in the both strains (P < 0.001). The variants with access to EM during the laying period (V3 and V4) showed lesser protrusion of the beak tip in week 48 (P < 0.001). The observed beneficial effects of EM could be attributed to its impact on foraging behavior and beak-tip abrasion.

Evolution of a conspicuous melanin-based ornament in gulls Laridae

Melanin- and carotenoid-based ornaments often signal different aspects of individual quality or similar components of quality under different environmental conditions and, thus, they may become evolutionarily integrated into a composite sexual trait. On the other hand, functionally and developmentally different characters (e.g. coloration characters of different developmental origin) are more likely to evolve independently from each other than more similar traits. Here, we examined evolutionary correlations between the occurrence of a conspicuous melanin-based ornament (hood) and carotenoid-based bare-part ornaments within gull family. We also aimed to identify major ecological, life-history and biogeographical predictors of hood occurrence and reconstruct evolutionary history of this ornament. We found that hood occurrence was associated with red or dark coloration of unfeathered traits (bill and legs), whereas combinations of hood with yellow carotenoid-based coloration of integument were evolutionarily avoided. Also, hood occurrence correlated negatively with the occurrence of other melanin-based plumage character (mantle). Breeding latitude and habitat were identified as major predictors of hood occurrence in gulls, as hoods were recorded more frequently in low-latitude and inland (rather than marine) species. Finally, our analysis provided support for evolutionary lability in hood occurrence, with a dominance of transitions towards hood loss in the evolutionary history of gulls. The results of our study provide one of the first evidence for a correlated evolution of melanin- and carotenoid-based ornaments in an avian lineage, which supports evolutionary modularity of developmentally and functionally different coloration traits.

Conspicuous Plumage Does Not Increase Predation Risk: A Continent-Wide Test Using Model Songbirds

The forces shaping female plumage color have long been debated but remain unresolved. Females may benefit from conspicuous colors but are also expected to suffer costs. Predation is one potential cost, but few studies have explicitly investigated the relationship between predation risk and coloration. The fairy-wrens show pronounced variation in female coloration and reside in a wide variety of habitats across Australasia. Species with more conspicuous females are found in denser habitats, suggesting that conspicuousness in open habitat increases vulnerability to predators. To test this, we measured attack rates on 3-D-printed models mimicking conspicuously colored males and females and dull females in eight different fairy-wren habitats across Australia. Attack rates were higher in open habitats and at higher latitudes. Contrary to our predictions, dull female models were attacked at similar rates to the conspicuous models. Further, the probability of attack in open habitats increased more for both types of female models than for the conspicuous male model. Across models, the degree of contrast (chromatic and achromatic) to environmental backgrounds was unrelated to predation rate. These findings do not support the long-standing hypothesis that conspicuous plumage, in isolation, is costly due to increased attraction of predators. Our results indicate that conspicuousness interacts with other factors in driving the evolution of plumage coloration.

Multi-modal signal evolution in birds: re-examining a standard proxy for sexual selection

Sexual selection is proposed to be an important driver of speciation and phenotypic diversification in animal systems. However, previous phylogenetic tests have produced conflicting results, perhaps because they have focused on a single signalling modality (visual ornaments), whereas sexual selection may act on alternative signalling modalities (e.g. acoustic ornaments). Here, we compile phenotypic data from 259 avian sister species pairs to assess the relationship between visible plumage dichromatism-a standard index of sexual selection in birds-and macroevolutionary divergence in the other major avian signalling modality: song. We find evidence for a strong negative relationship between the degree of plumage dichromatism and divergence in song traits, which remains significant even when accounting for other key factors, including habitat type, ecological divergence and interspecific interactions. This negative relationship is opposite to the pattern expected by a straightforward interpretation of the sexual selection-diversification hypothesis, whereby higher levels of dichromatism indicating strong sexual selection should be related to greater levels of mating signal divergence regardless of signalling modality. Our findings imply a 'trade-off' between the elaboration of visual ornaments and the diversification of acoustic mating signals, and suggest that the effects of sexual selection on diversification can only be determined by considering multiple alternative signalling modalities.

Frequency dispersion reveals chromophore diversity and colour-tuning mechanism in parrot feathers

Variation in animal coloration is often viewed as the result of chemically distinct pigments conferring different hues. The role of molecular environment on hue tends to be overlooked as analyses are mostly performed on free pigments extracted from the integument. Here we analysed psittacofulvin pigments within parrot feathers to explore whether the in situ organization of pigments may have an effect on hue. Resonance Raman spectra from a red region of a yellow-naped amazon Amazona auropalliata tail feather show frequency dispersion, a phenomenon that is related to the presence of a range of molecular conformations (and multiple chromophores) in the pigment, whereas spectra from a yellow region on the same feather do not show the same evidence for multiple chromophores. Our findings are consistent with non-isomeric psittacofulvin pigments behaving as a single chromophore in yellow feather barbs, which implies that psittacofulvins are dispersed into a structurally disordered mixture in yellow feathers compared with red feathers. Frequency dispersion in red barbs may instead indicate that pigments are structurally organized through molecule-molecule interactions. Major differences in the hues of parrot feathers are thus associated with differences in the organization of pigments within feathers.

dom.) as revealed by UV photography

Reflection and fluorescence properties of feathered and non-feathered body regions of white- and bronze-colored fattening turkeys of various ages were examined by ultraviolet (UV) photography. The examinations were carried out on 20 white-feathered fattening turkeys (B.U.T. 6; 10 males, 10 females) and 20 bronze-feathered fattening turkeys (Grelier 708; 10 males, 10 females) over a period of 21 weeks. The turkeys were photographed once a wk under long-wave UV (UVA) radiation illumination (λ = 344-407 nm) using a digital camera. A bandpass filter was used for UV reflectography to filter out the visible components of the used light source. A longpass filter was used for UV fluorescence photography to avoid blurring in the image due to chromatic aberration as a result of UV illumination. We found that natal down feathers of white-feathered turkeys showed an intense yellowish-green fluorescence under UVA light. UVA fluorescence also was shown by the natal downs of the slightly melanized plumage areas of bronze turkeys. Vaned feathers of white fattening turkeys reflected UVA radiation. Freshly molted feathers were optically distinguishable from the previous feather generation due to their more intense UVA reflection. In bronze turkeys, both the bright end seams of the dark pennaceous feathers and rectrices and the bright banding of primary and secondary remiges reflected UVA radiation. Intense UVA fluorescence was recognizable in day-old chicks of both color variants on the scutellate scales of the legs and toes. In male turkeys of both color variants, UVA-reflecting parts were recognizable with increasing age on the featherless head region. The UVA-fluorescent and UVA-reflective characteristics of the plumage of fattening turkeys were closely related to the plumage color, the feather type, the molting state, and the age of the birds. Further research is needed regarding the UVA-reflecting properties of the turkey plumage and the effects of full-spectrum illumination, including the UVA spectrum, on the behavior and health of fattening turkeys.

HISTORICAL EXAMINATION OF DELAYED PLUMAGE MATURATION IN THE SHOREBIRDS (AVES: CHARADRIIFORMES)

Delayed plumage maturation refers to the presence of nonadultlike immature plumages (juvenal plumage excluded). It is usually considered the result of selection for distinctive first-winter or first-summer appearance. In the present study, evolution of delayed plumage maturation is examined in the shorebirds: the sandpipers, plovers, gulls, and their allies. Nine plumage-maturation characters were identified, and their states were superimposed onto topologies generated during two recent investigations of shorebird relationships (Sibley and Ahlquist; revised Strauch). The characters were then optimized so as to assign character states to interior nodes of the trees in the most parsimonious way. Reconstructions of character evolution on six of the shortest revised Strauch trees were ambiguous with respect to delayed plumage maturation in the hypothetical ancestral shorebird. If plumage maturation was not delayed in the shorebird ancestor, optimization indicated that delay appeared when nonadultlike juvenal feathers were acquired. In contrast, on the single Sibley and Ahlquist tree, absence of delayed plumage maturation in the shorebird ancestor was indicated unambiguously, with three evolutionary novelties (nonadultlike juvenal feathers, seasonal plumage change, and a reduced first-spring molt) implicated in its acquisition. Optimization indicated that delayed plumage maturation in shorebirds can be explained plausibly without invoking selection for distinctive first-winter or first-summer appearance. Two of the novel conditions generating delayed plumage maturation (modified juvenal feathers and seasonal plumage change) did so only because they were acquired in a taxon possessing restricted first-year molts, which are primitive. Given these observations, it seems simplest to explain the delay in plumage maturation as an incidental consequence of the phylogenetic inertia of shorebird molts. The third novelty that generates delayed plumage maturation, a reduced first-spring molt, may have been acquired to reduce molt-associated energetic demands in young birds.

Conditions on the Mexican moulting grounds influence feather colour and carotenoids in Bullock's orioles (Icterus bullockii)

Carotenoid-based plumage coloration plays a critical role for both inter- and intrasexual communication. Habitat and diet during molt can have important consequences for the development of the ornamental signals used in these contexts. When molt occurs away from the breeding grounds (e.g., pre-alternate molt on the wintering grounds, or stopover molt), discerning the influence of habitat and diet can be particularly important, as these effects may result in important carryover effects that influence territory acquisition or mate choice in subsequent seasons. Several species of songbirds in western North America, including the Bullock's oriole (Icterus bullockii), migrate from the breeding grounds to undergo a complete prebasic (post-breeding) molt at a stopover site in the region affected by the Mexican monsoon climate pattern. This strategy appears to have evolved several times independently in response to the harsh, food-limited late-summer conditions in the arid West, which contrast strongly with the high productivity driven by heavy rains that is characteristic of the Mexican monsoon region. Within this region, individuals may be able to optimize plumage coloration by molting in favourable areas characterized by high resource abundance. We used stable isotope analysis (δ¹³C, δ¹⁵N) to ask whether the diet and molt habitat/location of Bullock's orioles influenced their expression of carotenoid-based plumage coloration as well as plumage carotenoid content and composition. Bullock's orioles with lower feather δ¹⁵N values acquired more colorful plumage (orange-shifted hue) but had feathers with lower total carotenoid concentration, lower zeaxanthin concentration, and marginally lower canthaxanthin and lutein concentration. Examining factors occurring throughout the annual cycle are critical for understanding evolutionary and ecological processes. Here, we demonstrate that conditions experienced during a stopover molt, occurring hundreds to thousands of kilometers from the breeding grounds, influence the production of ornamental plumage coloration, which may carryover to influence inter- and intrasexual signaling in subsequent seasons.

Heat dissipation during hovering and forward flight in hummingbirds

Flying animals generate large amounts of heat, which must be dissipated to avoid overheating. In birds, heat dissipation is complicated by feathers, which cover most body surfaces and retard heat loss. To understand how birds manage heat budgets during flight, it is critical to know how heat moves from the skin to the external environment. Hummingbirds are instructive because they fly at speeds from 0 to more than 12 m s(-1), during which they transit from radiative to convective heat loss. We used infrared thermography and particle image velocimetry to test the effects of flight speed on heat loss from specific body regions in flying calliope hummingbirds (Selasphorus calliope). We measured heat flux in a carcass with and without plumage to test the effectiveness of the insulation layer. In flying hummingbirds, the highest thermal gradients occurred in key heat dissipation areas (HDAs) around the eyes, axial region and feet. Eye and axial surface temperatures were 8°C or more above air temperature, and remained relatively constant across speeds suggesting physiological regulation of skin surface temperature. During hovering, birds dangled their feet, which enhanced radiative heat loss. In addition, during hovering, near-body induced airflows from the wings were low except around the feet (approx. 2.5 m s(-1)), which probably enhanced convective heat loss. Axial HDA and maximum surface temperature exhibited a shallow U-shaped pattern across speeds, revealing a localized relationship with power production in flight in the HDA closest to the primary flight muscles. We conclude that hummingbirds actively alter routes of heat dissipation as a function of flight speed.

Natural and sexual selection act on different axes of variation in avian plumage color

The bright colors of birds are often attributed to sexual selection on males, but in many species both sexes are colorful and it has been long debated whether sexual selection can also explain this variation. We show that most evolutionary transitions in color have been toward similar plumage in both sexes, and the color of both sexes (for example, bright or dull) was associated with indices of natural selection (for example, habitat type), whereas sexual differences in color were primarily associated with indices of sexual selection on males (for example, polygyny and large testes size). Debate about the evolution of bird coloration can be resolved by recognizing that both natural and sexual selection have been influential, but they have generally acted on two different axes: sexual selection on an axis of sexual differences and natural selection on both sexes for the type of color (for example, bright or dull).

Ancient origins and multiple appearances of carotenoid-pigmented feathers in birds

The broad palette of feather colours displayed by birds serves diverse biological functions, including communication and camouflage. Fossil feathers provide evidence that some avian colours, like black and brown melanins, have existed for at least 160 million years (Myr), but no traces of bright carotenoid pigments in ancient feathers have been reported. Insight into the evolutionary history of plumage carotenoids may instead be gained from living species. We visually surveyed modern birds for carotenoid-consistent plumage colours (present in 2956 of 9993 species). We then used high-performance liquid chromatography and Raman spectroscopy to chemically assess the family-level distribution of plumage carotenoids, confirming their presence in 95 of 236 extant bird families (only 36 family-level occurrences had been confirmed previously). Using our data for all modern birds, we modelled the evolutionary history of carotenoid-consistent plumage colours on recent supertrees. Results support multiple independent origins of carotenoid plumage pigmentation in 13 orders, including six orders without previous reports of plumage carotenoids. Based on time calibrations from the supertree, the number of avian families displaying plumage carotenoids increased throughout the Cenozoic, and most plumage carotenoid originations occurred after the Miocene Epoch (23 Myr). The earliest origination of plumage carotenoids was reconstructed within Passeriformes, during the Palaeocene Epoch (66-56 Myr), and not at the base of crown-lineage birds.

Elaborate visual and acoustic signals evolve independently in a large, phenotypically diverse radiation of songbirds

The concept of a macroevolutionary trade-off among sexual signals has a storied history in evolutionary biology. Theory predicts that if multiple sexual signals are costly for males to produce or maintain and females prefer a single, sexually selected trait, then an inverse correlation between sexual signal elaborations is expected among species. However, empirical evidence for what has been termed the 'transfer hypothesis' is mixed, which may reflect different selective pressures among lineages, evolutionary covariates or methodological differences among studies. Here, we examine interspecific correlations between song and plumage elaboration in a phenotypically diverse, widespread radiation of songbirds, the tanagers. The tanagers (Thraupidae) are the largest family of songbirds, representing nearly 10% of all songbirds. We assess variation in song and plumage elaboration across 301 species, representing the largest scale comparative study of multimodal sexual signalling to date. We consider whether evolutionary covariates, including habitat, structural and carotenoid-based coloration, and subfamily groupings influence the relationship between song and plumage elaboration. We find that song and plumage elaboration are uncorrelated when considering all tanagers, although the relationship between song and plumage complexity varies among subfamilies. Taken together, we find that elaborate visual and vocal sexual signals evolve independently among tanagers.

Plumage color and reproductive output of eastern bluebirds (Sialia sialis) nesting near a mercury-contaminated river

Despite the growing evidence of mercury's impact on ecosystems, few studies have looked at the environmental impact of mercury pollution on terrestrial songbirds and the complex ways through which mercury might influence their fitness. In 2007-2008 eastern bluebirds (Sialia sialis) were monitored on mercury contaminated and reference sites for blood and feather mercury, reproductive success and plumage coloration. Higher tissue mercury accumulation was associated with plumage that was overall brighter and shifted towards the UV portion of the spectrum. In females, long-term mercury exposure, as indicated by feather mercury, was associated with smaller clutches of eggs. In males, recent mercury exposure, as indicated by blood mercury, was associated with a reduction in the proportion of hatchlings that fledged, potentially through reduced male provisioning of offspring. Reproductive success and plumage color are closely linked in bluebirds through mate choice, and our findings indicate that mercury contamination is associated with reproductive success directly and possibly indirectly, through coloration of bluebirds.

Sex-biased parental investment is correlated with mate ornamentation in eastern bluebirds

Males typically have greater variance in reproductive success than females, so mothers should benefit by producing sons under favorable conditions. Being paired with a better-than-average mate is one such favorable circumstance. High-quality fathers can improve conditions for their offspring by providing good genes, good resources, or both, so females paired to such males should invest preferentially in sons. Ornamentation has been linked to male quality in many birds and, in support of differential allocation theory, females of several avian species invest more in entire broods when paired to attractive mates. Additionally, the females of some bird species apparently manipulate the primary sex-ratio of their broods in relation to the attractiveness of their mates. However, empirical support for a link between mate ornamentation and preferential feeding of sons (another form of biased investment) is lacking. We tested for correlations between sex-biased parental investment and mate plumage colour in the eastern bluebird (Sialia sialis), a species in which juveniles have sexually dichromatic UV-blue plumage. We found that the proportion of maternal feeding attempts to fledgling sons (versus fledgling daughters) was positively correlated with structurally coloured plumage ornamentation of fathers. Additionally, paternal feeding attempts to sons were correlated with plumage ornamentation of mothers and increased in fathers exhibiting breast plumage characteristics typical of older males. These results provide further support for the idea that parental strategies are influenced by mate attractiveness and provide the first evidence that mate ornamentation can influence parental behavior even after offspring have left the nest.

Tract specificity in the structure of down feathers of the newly-hatched chick

Comparative study of completed down feathers from seven of the major tracts of newly-hatched Silver Campine chicks reveals tract-specific differences in the total length of the primary group of barbs and in the length of their barbule-free tips. Two classes of barbs can be distinguished on the basis of overall length in feathers of any one of the tracts: (a) those barbs that form from the first group (complement) of 9-11 barb ridges that arise in strict dorsoventral order around the circumference of the epidermal cylinder strict dorsoventral order around the circumference of the epidermal cylinder of the feather germ, and (b) those barbs that are added secondarily, later, either by the formation of a newly organized ridge between the bases of two of the original group of barb ridges, or by the splitting of one or more of the original complement of barb ridges. The primary (majority) group of ridges, only, are of use in gauging tract specificity. The statistical significance of measurements of total barb-length and the length of the barbule-free tips have been evaluated; differences between the feathers of each of the seven tracts examined can be distinguished statistically. The fact that the first feathers to form from the papillae are tract-specific shows, unquestionably, that specificity is present in the papillae from the very beginning of their organization, as might be inferred from their orderly pattern of origin in time and space within each of the various tracts.