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Morillas H, Maguregui M, Gallego-Cartagena E, Huallparimachi G, Marcaida I, Salcedo I, Silva LFO, Astete F. Evaluation of the role of biocolonizations in the conservation state of Machu Picchu (Peru): The Sacred Rock. Sci Total Environ 2019; 654:1379-1388. [PMID: 30527887 DOI: 10.1016/j.scitotenv.2018.11.299] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2018] [Revised: 11/19/2018] [Accepted: 11/20/2018] [Indexed: 06/09/2023]
Abstract
Machu Picchu Inca sanctuary (Cusco Region, Peru) was constructed on a granitic plateau, better known as Vilcabamba batholith. One of the most important carved granitic rocks from this archaeological site is the Sacred Rock, used by Inca citizens for religious rituals. Due to the location and climatic conditions, different rocks from this archaeological site are affected by biocolonizations. Concretely, the Sacred Rock shows flaking and delamination problems. In this work, a non-destructive multi analytical methodology has been applied to determine the possible role of the biodeteriogens, forming the biological patina on the Sacred Rock, in the previously mentioned conservation problems. Before characterizing the biological patina, a mineralogical characterization of the granitic substrate was conducted using X-ray Diffraction, Raman microscopy (RM) and micro energy dispersive X-ray fluorescence spectrometry. For the identification of the main biodeteriogens in the biofilm, Phase Contrast Microscopy was used. RM also allowed to determine the distribution (imaging) and the penetration (depth profiling) of the biogenic pigments present in the biopatina. Thanks to this study, it was possible to asses that some colonizers are growing on inner areas of the rock, reinforcing their possible assistance in the delamination. Moreover, the in-depth distribution of a wide variety of carotenoids in the patinas allowed to approach the penetration ability of the main biodeteriogens and the diffusion of these biogenic pigments to the inner areas of the rocky substrate.
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Affiliation(s)
- Héctor Morillas
- Department of Analytical Chemistry, Faculty of Science and Technology, University of the Basque Country UPV/EHU, P.O. Box 644, 48080 Bilbao, Basque Country, Spain; Department of Mathematics and Experimental Sciences Didactics, Faculty of Education, Philosophy and Anthropology, University of the Basque Country UPV/EHU, II Building, Oñati Plaza 3, 20018 Donostia-San Sebastian, Basque Country, Spain
| | - Maite Maguregui
- Department of Analytical Chemistry, Faculty of Pharmacy, University of the Basque Country UPV/EHU, P.O. Box 450, 01080 Vitoria-Gasteiz, Basque Country, Spain.
| | - Euler Gallego-Cartagena
- Department of Analytical Chemistry, Faculty of Science and Technology, University of the Basque Country UPV/EHU, P.O. Box 644, 48080 Bilbao, Basque Country, Spain; Department of Civil and Environmental, Universidad de la Costa, Calle 58 #55-66, 080002 Barranquilla, Colombia
| | - Gladys Huallparimachi
- Ministerio de Cultura - Dirección Desconcentrada de Cultura Cusco, Dirección PAN Machu Picchu, Peru; Universidad Nacional San Antonio Abad del Cusco, P.O. Box 921, Av. de la Cultura, N° 733, Cusco, Peru
| | - Iker Marcaida
- Department of Analytical Chemistry, Faculty of Science and Technology, University of the Basque Country UPV/EHU, P.O. Box 644, 48080 Bilbao, Basque Country, Spain
| | - Isabel Salcedo
- Department of Plant Biology & Ecology, Faculty of Science and Technology, University of the Basque Country UPV/EHU, P.O. Box 644, 48080 Bilbao, Basque Country, Spain
| | - Luis F O Silva
- Department of Civil and Environmental, Universidad de la Costa, Calle 58 #55-66, 080002 Barranquilla, Colombia; Faculdade Meridional IMED, 304-Passo Fundo - RS 99070-220, Brazil
| | - Fernando Astete
- Ministerio de Cultura - Dirección Desconcentrada de Cultura Cusco, Dirección PAN Machu Picchu, Peru
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Muggia L, Kopun T, Grube M. Effects of Growth Media on the Diversity of Culturable Fungi from Lichens. Molecules 2017; 22:E824. [PMID: 28513562 PMCID: PMC6154544 DOI: 10.3390/molecules22050824] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2017] [Revised: 05/10/2017] [Accepted: 05/11/2017] [Indexed: 11/16/2022] Open
Abstract
Microscopic and molecular studies suggest that lichen symbioses contain a plethora of associated fungi. These are potential producers of novel bioactive compounds, but strains isolated on standard media usually represent only a minor subset of these fungi. By using various in vitro growth conditions we are able to modulate and extend the fraction of culturable lichen-associated fungi. We observed that the presence of iron, glucose, magnesium and potassium in growth media is essential for the successful isolation of members from different taxonomic groups. According to sequence data, most isolates besides the lichen mycobionts belong to the classes Dothideomycetes and Eurotiomycetes. With our approach we can further explore the hidden fungal diversity in lichens to assist in the search of novel compounds.
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Affiliation(s)
- Lucia Muggia
- Department of Life Sciences, University of Trieste, via Giorgieri 10, 34127 Trieste, Italy.
| | - Theodora Kopun
- Institute of Plant Science, Karl-Franzens University of Graz, Holteigasse 6, 8010 Graz, Austria.
| | - Martin Grube
- Institute of Plant Science, Karl-Franzens University of Graz, Holteigasse 6, 8010 Graz, Austria.
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Parrot D, Antony-Babu S, Intertaglia L, Grube M, Tomasi S, Suzuki MT. Littoral lichens as a novel source of potentially bioactive Actinobacteria. Sci Rep 2015; 5:15839. [PMID: 26514347 PMCID: PMC4626775 DOI: 10.1038/srep15839] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2015] [Accepted: 10/01/2015] [Indexed: 11/09/2022] Open
Abstract
Cultivable Actinobacteria are the largest source of microbially derived bioactive molecules. The high demand for novel antibiotics highlights the need for exploring novel sources of these bacteria. Microbial symbioses with sessile macro-organisms, known to contain bioactive compounds likely of bacterial origin, represent an interesting and underexplored source of Actinobacteria. We studied the diversity and potential for bioactive-metabolite production of Actinobacteria associated with two marine lichens (Lichina confinis and L. pygmaea; from intertidal and subtidal zones) and one littoral lichen (Roccella fuciformis; from supratidal zone) from the Brittany coast (France), as well as the terrestrial lichen Collema auriforme (from a riparian zone, Austria). A total of 247 bacterial strains were isolated using two selective media. Isolates were identified and clustered into 101 OTUs (98% identity) including 51 actinobacterial OTUs. The actinobacterial families observed were: Brevibacteriaceae, Cellulomonadaceae, Gordoniaceae, Micrococcaceae, Mycobacteriaceae, Nocardioidaceae, Promicromonosporaceae, Pseudonocardiaceae, Sanguibacteraceae and Streptomycetaceae. Interestingly, the diversity was most influenced by the selective media rather than lichen species or the level of lichen thallus association. The potential for bioactive-metabolite biosynthesis of the isolates was confirmed by screening genes coding for polyketide synthases types I and II. These results show that littoral lichens are a source of diverse potentially bioactive Actinobacteria.
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Affiliation(s)
- Delphine Parrot
- UMR CNRS 6226, Institut des Sciences chimiques de Rennes, Equipe PNSCM “Produits Naturels – Synthèses – Chimie Médicinale”, UFR Sciences Pharmaceutiques et Biologiques, Univ. Rennes 1, Université Européenne de Bretagne, 2 Avenue du Pr. Léon Bernard, F-35043 Rennes, France
| | - Sanjay Antony-Babu
- Sorbonne Universités; UPMC Univ. Paris VI, UMS 2348, USR 3579 LBBM, Observatoire Océanologique, Banyuls-sur-Mer 66650, France
- CNRS, USR 3579, LBBM, Observatoire Océanologique, F-66650, Banyuls/Mer, France
| | - Laurent Intertaglia
- Sorbonne Universités; UPMC Univ. Paris VI, UMS 2348, USR 3579 LBBM, Observatoire Océanologique, Banyuls-sur-Mer 66650, France
- CNRS, UMS 2348 (Plate-forme Bio2Mar), Observatoire Océanologique, F-66650 Banyuls/Mer, France
| | - Martin Grube
- Institut für Pflanzenwissenschaften Karl-Franzens-Universität Graz, Austria
| | - Sophie Tomasi
- UMR CNRS 6226, Institut des Sciences chimiques de Rennes, Equipe PNSCM “Produits Naturels – Synthèses – Chimie Médicinale”, UFR Sciences Pharmaceutiques et Biologiques, Univ. Rennes 1, Université Européenne de Bretagne, 2 Avenue du Pr. Léon Bernard, F-35043 Rennes, France
| | - Marcelino T. Suzuki
- Sorbonne Universités; UPMC Univ. Paris VI, UMS 2348, USR 3579 LBBM, Observatoire Océanologique, Banyuls-sur-Mer 66650, France
- CNRS, USR 3579, LBBM, Observatoire Océanologique, F-66650, Banyuls/Mer, France
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Abstract
An enzyme immunoassay for usnic acid in lichens was developed, the sensitivity of which was 0.1 microg/g of air-dried material (0.00001%). Polyclonal rabbit antibodies against bovine serum albumin conjugated to (+)-usnic acid under the conditions of formaldehyde condensation made it possible to determine the analyzed substance in solutions at concentrations from 1 ng/mL when it interacts with an immobilized gelatin conjugate homologous in the binding mode. Usnic acid in 2-26600 microg/g (0.0002-2.6%) amounts was found in all 236 studied samples of lichens belonging to 53 species and 8 families.
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Almeida SM, Lage J, Freitas MDC, Pedro AI, Ribeiro T, Silva AV, Canha N, Almeida-Silva M, Sitoe T, Dionisio I, Garcia S, Domingues G, de Faria JP, Fernández BG, Ciaparra D, Wolterbeek HT. Integration of biomonitoring and instrumental techniques to assess the air quality in an industrial area located in the coastal of central Asturias, Spain. J Toxicol Environ Health A 2012; 75:1392-1403. [PMID: 23095157 DOI: 10.1080/15287394.2012.721173] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Throughout the world, epidemiological studies were established to examine the relationship between air pollution and mortality rates and adverse respiratory health effects. However, despite the years of discussion the correlation between adverse health effects and atmospheric pollution remains controversial, partly because these studies are frequently restricted to small and well-monitored areas. Monitoring air pollution is complex due to the large spatial and temporal variations of pollution phenomena, the high costs of recording instruments, and the low sampling density of a purely instrumental approach. Therefore, together with the traditional instrumental monitoring, bioindication techniques allow for the mapping of pollution effects over wide areas with a high sampling density. In this study, instrumental and biomonitoring techniques were integrated to support an epidemiological study that will be developed in an industrial area located in Gijon in the coastal of central Asturias, Spain. Three main objectives were proposed to (i) analyze temporal patterns of PM₁₀ concentrations in order to apportion emissions sources, (ii) investigate spatial patterns of lichen conductivity to identify the impact of the studied industrial area in air quality, and (iii) establish relationships amongst lichen conductivity with some site-specific characteristics. Samples of the epiphytic lichen Parmelia sulcata were transplanted in a grid of 18 by 20 km with an industrial area in the center. Lichens were exposed for a 5-mo period starting in April 2010. After exposure, lichen samples were soaked in 18-MΩ water aimed at determination of water electrical conductivity and, consequently, lichen vitality and cell damage. A marked decreasing gradient of lichens conductivity relative to distance from the emitting sources was observed. Transplants from a sampling site proximal to the industrial area reached values 10-fold higher than levels far from it. This finding showed that lichens reacted physiologically in the polluted industrial area as evidenced by increased conductivity correlated to contamination level. The integration of temporal PM₁₀ measurements and analysis of wind direction corroborated the importance of this industrialized region for air quality measurements and identified the relevance of traffic for the urban area.
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Affiliation(s)
- Susana Marta Almeida
- URSN, IST/ITN, Instituto Superior Técnico, Universidade Técnica de Lisboa, Sacavém, Portugal.
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Cámara B, De los Ríos A, Urizal M, de Buergo MA, Varas MJ, Fort R, Ascaso C. Characterizing the microbial colonization of a dolostone quarry: implications for stone biodeterioration and response to biocide treatments. Microb Ecol 2011; 62:299-313. [PMID: 21359558 DOI: 10.1007/s00248-011-9815-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2010] [Accepted: 02/01/2011] [Indexed: 05/30/2023]
Abstract
This study examines the microbial colonization of three fronts of an abandoned dolostone quarry (Redueña, Madrid, Spain) exposed to atmospheric conditions for different time periods since Roman times to the present. Through scanning electron microscopy in backscattered electron mode (SEM-BSE), endolithic colonization was predominantly detected in the most recently exposed front, while in the longer exposed quarry fronts, epilithic forms of growth were most often observed. These observations were confirmed by denaturing gradient gel electrophoresis (DGGE) analysis. Based on the distribution pattern of microbial colonization in the different quarry fronts, we then established a sequence of colonization events that took place over this long time frame. Bioalteration processes related to this sequential colonization were also identified. Characterizing these sequential processes can be useful for interpreting biodeterioration processes in historic dolostone monuments, especially those affecting constructions in the area of the Redueña stone quarry. In a second experimental stage, different biocide treatments were tested on this quarry rock to find the best way to avoid the microbial colonization effects identified. Through combined SEM-BSE/DGGE analysis, the efficacy of several biocides against the microorganisms inhabiting the dolostones was assessed after 4 and 16 months treatment. In general, all treatments were effective at reducing around 80% of the lichen cover, although effects on endolithic lithobiontic communities were dependent on how well the rock surface had been mechanically cleaned prior to treatment and gradually disappeared over time.
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Affiliation(s)
- Beatriz Cámara
- Museo Nacional de Ciencias Naturales, CSIC, C/Serrano 115 Dpdo, 28006, Madrid, Spain.
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Svoboda D, Peksa O, Veselá J. Epiphytic lichen diversity in central European oak forests: assessment of the effects of natural environmental factors and human influences. Environ Pollut 2010; 158:812-819. [PMID: 19880227 DOI: 10.1016/j.envpol.2009.10.001] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2009] [Revised: 09/07/2009] [Accepted: 10/02/2009] [Indexed: 05/28/2023]
Abstract
We investigated lichen diversity in temperate oak forests using standardized protocols. Forty-eight sites were sampled in the Czech Republic, Slovakia and Hungary. The effects of natural environmental predictors and human influences on lichen diversity (lichen diversity value, species richness) were analysed by means of correlation tests. We found that lichen diversity responded differently to environmental predictors between two regions with different human impact. In the industrial region, air pollution was the strongest factor. In the agricultural to highly forested regions, lichen diversity was strongly influenced by forest age and forest fragmentation. We found that several natural factors can in some cases obscure the effect of human influences. Thus, factors of natural gradient must be considered (both statistically and interpretively) when studying human impact on lichen diversity.
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Affiliation(s)
- David Svoboda
- Department of Botany, Faculty of Science, Charles University, Benátská 2, 128 01 Praha 2, Czech Republic.
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Langhans TM, Storm C, Schwabe A. Community assembly of biological soil crusts of different successional stages in a temperate sand ecosystem, as assessed by direct determination and enrichment techniques. Microb Ecol 2009; 58:394-407. [PMID: 19479305 DOI: 10.1007/s00248-009-9532-x] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2008] [Accepted: 04/28/2009] [Indexed: 05/20/2023]
Abstract
In temperate regions, biological soil crusts (BSCs: complex communities of cyanobacteria, eukaryotic algae, bryophytes, and lichens) are not well investigated regarding community structure and diversity. Furthermore, studies on succession are rare. For that reason, the community assembly of crusts representing two successional stages (initial, 5 years old; and stable, >20 years old) were analyzed in an inland sand ecosystem in Germany in a plot-based approach (2 x 18 plots, each 20 x 20 cm). Two different methods were used to record the cyanobacteria and eukaryotic algae in these communities comprehensively: determination directly out of the soil and enrichment culture techniques. Additionally, lichens, bryophytes, and phanerogams were determined. We examine four hypotheses: (1) A combination of direct determination and enrichment culture technique is necessary to detect cyanobacteria and eukaryotic algae comprehensively. In total, 45 species of cyanobacteria and eukaryotic algae were detected in the study area with both techniques, including 26 eukaryotic algae and 19 cyanobacteria species. With both determination techniques, 22 identical taxa were detected (11 eukaryotic algae and 11 cyanobacteria). Thirteen taxa were only found by direct determination, and ten taxa were only found in enrichment cultures. Hence, the hypothesis is supported. Additionally, five lichen species (three genera), five bryophyte species (five genera), and 24 vascular plant species occurred. (2) There is a clear difference between the floristic structure of initial and stable crusts. The different successional stages are clearly separated by detrended correspondence analysis, showing a distinct structure of the community assembly in each stage. In the initial crusts, Klebsormidium flaccidum, Klebsormidium cf. klebsii, and Stichococcus bacillaris were important indicator species, whereas the stable crusts are especially characterized by Tortella inclinata. (3) The biodiversity of BSC taxa and vascular plant species increases from initial to stable BSCs. There are significantly higher genera and species numbers of cyanobacteria and eukaryotic algae in initial BSCs. Stable BSCs are characterized by significantly higher species numbers of bryophytes and vascular plant species. The results show that, in the investigated temperate region, the often-assumed increase of biodiversity in the course of succession is clearly taxa-dependent. Both successional stages of BSCs are diversity "hot spots" with about 29 species of all taxa per 20 x 20 cm plot. (4) Nitrogen and chlorophyll a concentrations increase in the course of succession. The chlorophyll a content of the crusts (cyanobacteria, eukaryotic algae, bryophyte protonemata) is highly variable across the studied samples, with no significant differences between initial and stable BSCs; nor were ecologically significant differences in soil nutrient contents observed. According to our results, we cannot confirm this hypothesis; the age difference between our two stages is probably not big enough to show such an increase.
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Affiliation(s)
- Tanja Margrit Langhans
- Department Biology, Vegetation Ecology, Darmstadt University of Technology, Schnittspahnstrasse 4, 64287 Darmstadt, Germany
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Büdel B, Darienko T, Deutschewitz K, Dojani S, Friedl T, Mohr KI, Salisch M, Reisser W, Weber B. Southern African biological soil crusts are ubiquitous and highly diverse in drylands, being restricted by rainfall frequency. Microb Ecol 2009; 57:229-47. [PMID: 18850242 DOI: 10.1007/s00248-008-9449-9] [Citation(s) in RCA: 109] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2007] [Accepted: 09/09/2008] [Indexed: 05/18/2023]
Abstract
Biological soil crusts (BSCs) are found in all dryland regions of the world, including the polar regions. They are also known to occur in the southern African region. Although there were a number of case studies on BSCs from that region, we did not know if they are a normal part of the vegetation cover or just a phenomenon that occasionally occurs here and there. In order to investigate diversity, distribution patterns, and the driving factors of both, we followed a random sampling system of observatories along a transect, stretching from the Namibian-Angolan border down south to the Cape Peninsula, covering seven different major biomes. Biological soil crusts were found to occur in six out of seven biomes. Despite the fact that soil-dwelling algae occurred in the Fynbos biome, crust formation was not observed for hitherto unknown reasons. Seven BSC types were distinguished on the basis of morphology and taxonomic composition: three of them were cyanobacteria-dominated, one with additional chlorolichens, two with bryophytes, one hypolithic type restricted to quartz gravel pavements, and the unique lichen fields of the Namib Desert. Besides 29 green algal species in 21 genera, one heterokont alga, 12 cyanolichens, 14 chlorolichens, two genera of liverworts, and three genera of mosses, these crusts are positioned among the most diverse BSCs worldwide mainly because of the unusual high cyanobacterial species richness comprising 58 species in 21 genera. They contribute considerably to the biodiversity of arid and semi-arid bioregions. Taxonomic diversity of cyanobacteria was significantly higher in the winter rain zone than in the summer rain zone (54 versus 32 species). The soil photosynthetic biomass (chlorophylla/m2), the carbon content of the soil and the number of BSC types were significantly higher in the winter rain zone (U27, 29=215.0, p=0.004 [chla]; U21, 21=135.0, p=0.031 [C]; U27, 29=261.5, p=0.028 [BSC types]; excluding the fog-dominated Namib biome). The winter rain zone is characterized by a lower precipitation amount, but a higher rain frequency with the number of rainy days more evenly distributed over the year. The dry period is significantly shorter per year in the winter rain zone (U8, 9=5.0, p=0.003). We conclude that rain frequency and duration of dry periods rather than the precipitation amount is the main factor for BSC growth and succession. Nitrogen content of the soils along the transect was generally very low and correlated with soil carbon content. There was a weak trend that an increasing proportion of silt and clay (<0.63 mm) in the soil is associated with higher values of BSC chlorophyll content (Pearson correlation coefficient=0.314, p=0.237). Furthermore, we found a significant positive correlation between silt and clay and the number of BSC types (Pearson correlation coefficient=0.519, p=0.039), suggesting that fine grain-size promotes BSC succession and their biomass content. Lichens and bryophytes occurred in BSCs with lower disturbance frequencies (e.g. trampling) only. Crust thickness and chlorophyll content increased significantly from crusts of the early successional type to the late successional crust types. From our results, we conclude that BSCs are a normal and frequent element of the vegetation in arid and semi-arid southwestern Africa, and that rain frequency and duration of dry periods rather than the precipitation amount are the key factors for the development, differentiation and composition of BSCs.
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Affiliation(s)
- Burkhard Büdel
- Plant Ecology and Systematics, Department of Biology, University of Kaiserslautern, Erwin-Schrödinger-Str. Bau 13, D-67663, Kaiserslautern, Germany.
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Yazici K, Aslan A, Etayo J, Giordani P. Lichens from Antalya, Cankiri, Konya and Nevsehir Provinces (Turkey). Pak J Biol Sci 2008; 11:2201-2208. [PMID: 19137828 DOI: 10.3923/pjbs.2008.2201.2208] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
A contribution to the lichen flora of Turkey is performed. A total of 171 lichen taxa (including 2 subspecies and 2 varieties) and 1 lichenicolous fungus are determined from 14 localities in Antalya, Cankiri, Konya and Nevşehir provinces of Turkey. Caloplaca scrobiculata H. Magn. is new to Turkey. Besides Caloplaca scrobiculata H. Magn. and Xanthoria sorediata (Vain.) Poelt were found for the second time in Asia. Carbonea vitellinaria (Nyl.) Hertel was found to grow on Candelariella vitellina (Hoffm.) Müll. Arg. while Muellerella pymaea (Körb.) D. Hawksw. var. athallina (Müll. Arg.) Triebel (lichenicolous fungus) on Tephromela atra (Huds.) Hafellner as parasitic. All lichen taxa found in Cankiri are new to this province (92 intraspecific taxa), while 39 new to Nevşehir, 8 new to Konya and 5 new to Antalya provinces. For every each taxon, the habitat pattern and distribution data are presented.
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Affiliation(s)
- K Yazici
- Department of Biology, Faculty of Sciences and Arts, Karadeniz Technical University, 61080, Trabzon, Turkey
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Herrera-Campos MDLA, Huhndorf S, Lücking R. The foliicolous lichen flora of Mexico IV: a new, foliicolous species of Pyrenothrix (Chaetothyriales: Pyrenothrichaceae). Mycologia 2006; 97:356-61. [PMID: 16396344 DOI: 10.3852/mycologia.97.2.356] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Pyrenothrix mexicana Herrera-Campos, Huhndorf & Lücking spec. nova is described from leaves in the upper montane rainforest of Oaxaca State, Mexico. It is the second species in the genus Pyrenothrix Riddle, established at the beginning of the twentieth century for the single species, P. nigra Riddle, a corticolous lichen restricted to southeastern United States. Both taxa have the same thallus and perithecial morphology and anatomy, but P. mexicana differs by its longer, transversally septate ascospores. The perithecial anatomy of Pyrenothrix is documented and its systematic affinities are discussed, and we conclude that the family Pyrenothrichaceae Zahlbr. should be placed in the order Chaetothyriales.
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Affiliation(s)
- María de los Angeles Herrera-Campos
- Departamento de Botáinica, Instituto de Biología, Universidad Nacional Autónoma de México, Apdo. Postal 70-233, Coyoacán 04510, Cd. Universitaria, México, DF México
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Hur JS, Wang LS, Oh SO, Kim GH, Lim KM, Jung JS, Koh YJ. Highland macrolichen flora of Northwestern Yunnan, China. J Microbiol 2005; 43:228-36. [PMID: 15995639] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Fifty-six species in 36 genera of macrolichens are reported from the Zhongdian area, northwest Yunnan, China during the lichenological expedition for highland macrolichen survey in June, 2004. More than 60% of these species have not been reported in South Korea. All of the 182 collected specimens are deposited in the Korean Lichen Research Institute (KoLRI) at Sunchon National University in Korea, and some of them are duplicated in the lichen herbarium, Crytogamic Herbarium, Kunming Institute of Botany, Academia Sinica (KUN-L) in China. This is the first report on the macrolichen flora in the visited areas.
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Affiliation(s)
- Jae-Seoun Hur
- Department of Environmental Education, Sunchon National University, Sunchon 540-742, Republic of Korea
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Reis RA, Iacomini M, Gorin PAJ, de Souza LM, Grube M, Cordeiro LMC, Sassaki GL. Fatty acid composition of the tropical lichenTeloschistes flavicansand its cultivated symbionts. FEMS Microbiol Lett 2005; 247:1-6. [PMID: 15927741 DOI: 10.1016/j.femsle.2005.04.023] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2005] [Revised: 03/24/2005] [Accepted: 04/14/2005] [Indexed: 11/23/2022] Open
Abstract
Fatty acid components, in both the free and combined form of the intact tropical lichen Teloschistes flavicans, and its isolated photobiont and mycobiont, were analyzed by GC-MS of derived methyl esters. Its rDNA analysis confirmed that the isolated cultured symbionts belong to the genera Trebouxia and Teloschistes, respectively. The fatty acid composition of the lichen did not correspond to those found in the isolated symbionts, suggesting that the fatty acid metabolism is markedly influenced by the symbiosis. Differences in the fatty acid composition in the lichen were observed during the summer (27 degrees C), when the main fatty acids were saturated and in the winter (22 degrees C) when an increase of unsaturated fatty acids occurred. Similar differences of composition were also observed for the cultured mycobiont at different temperatures. The increase in the unsaturation level at low temperatures would maintain the membrane fluidity. Our results are the first on the fatty acids of a tropical lichen and suggest that it is sensitive to small temperature variations, which influences its saturated and unsaturated fatty acid composition.
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Affiliation(s)
- Rodrigo Arantes Reis
- Departamento de Bioquímica, Universidade Federal do Paraná, Curitiba, PR, Brazil
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14
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Abstract
The fossil record of fungi and lichens is scarce. Here we report the discovery of lichen-like fossils, involving filamentous hyphae closely associated with coccoidal cyanobacteria or algae, preserved in marine phosphorite of the Doushantuo Formation (between 551 and 635 million years old) at Weng'an, South China. These fossils indicate that fungi developed symbiotic partnerships with photoautotrophs before the evolution of vascular plants.
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Affiliation(s)
- Xunlai Yuan
- Nanjing Institute of Geology and Palaeontology, Nanjing 210008, China
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15
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Kahng HY, Yoon BJ, Kim SH, Shin DJ, Hur JS, Kim HW, Kang ES, Oh KH, Koh YJ. Introduction of saxicolous lichens distributed in coastal rocks of U-do islet in Jeju, Korea. J Microbiol 2004; 42:292-8. [PMID: 15650685] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/01/2023]
Abstract
This study reports, for the first time, the investigation of the distribution of Korean saxicolous lichens in the coastal rocks of U-do islet, which is known as an unpolluted zone in Jeju. More than thirty lichens were obtained and investigated from the coastal rocks frequently contacted by seawater. A molecular analysis using PCR amplification of the rRNA ITS regions revealed the coastal rock lichens could be placed into 8 families and 14 genera, Ramalinaceae (Bacidia, Ramalina), Physciaceae (Buellia, Dirinaria, Phaeophyscia, Physcia, Pyxine), Lecanoraceae (Candelaria, Lecanora), Parmeliaceae (Xanthoparmelia), Graphidaceae (Graphis), Pertusariaceae (Pertusaria), Rhizocarpaceae (Rhizocarpon), and Teloschistaceae (Caloplaca), showing a diversity of lichens, with foliose (flat leaf-like), crustose (crust-like), and fruticose (miniature shrub-like) life forms might be distributed in the coastal rocks. These findings suggested the possibility that the lichens identified in the present work might be resistant to a salty environment.
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Affiliation(s)
- Hyung-Yeel Kahng
- Department of Environmental Education, Sunchon National University, 315 Maegok-dong, Suncheon 540-742, Republic of Korea.
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16
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Hur JS, Harada H, Oh SO, Lim KM, Kang ES, Lee SM, Kahng HY, Kim HW, Jung JS, Koh YJ. Distribution of lichen flora on South Korea. J Microbiol 2004; 42:163-7. [PMID: 15357314] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/30/2023]
Abstract
After an overview on the temporary situation of the lichenology in South Korea, localities of 95 macrolichen taxa are reported for South Korea. In this revised lichen flora of South Korea, 16 species are apparently new to the territory. Voucher specimens have been deposited in the Korean Lichen Research Institute (KoLRI) at Sunchon National University in Korea, and duplicates have also been donated to the National History Museum and Institute, in Chiba, (CBM) Japan.
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Affiliation(s)
- Jae-Seoun Hur
- Department of Environmental Education, Sunchon National University, Sunchon 540-742, Korea
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17
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Takenaka Y, Tanahashi T, Nagakura N, Hamada N. Phenyl ethers from cultured lichen mycobionts of Graphis scripta var. serpentina and G. rikuzensis. Chem Pharm Bull (Tokyo) 2003; 51:794-7. [PMID: 12843584 DOI: 10.1248/cpb.51.794] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Spore-derived mycobionts of the lichen Graphis scripta var. serpentina and G. rikuzensis were cultivated on a malt-yeast extract medium supplemented with 10% sucrose and their metabolites were investigated. 3,3'-Dihydroxy-5,5'-dimethyldiphenyl ether was isolated from the cultures of the mycobionts of G. scripta var. serpentina, while a new phenyl ether, rikuzenol, along with two known diphenyl ethers, violaceol-I and violaceol-II, were isolated from those of G. rikuzensis. The structure of the new compound was determined by spectroscopic methods. Violaceol-I was chemically synthesized and interconversion between violaceol-I and violaceol-II was proven.
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18
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de la Torre JR, Goebel BM, Friedmann EI, Pace NR. Microbial diversity of cryptoendolithic communities from the McMurdo Dry Valleys, Antarctica. Appl Environ Microbiol 2003; 69:3858-67. [PMID: 12839754 PMCID: PMC165166 DOI: 10.1128/aem.69.7.3858-3867.2003] [Citation(s) in RCA: 235] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
In the McMurdo Dry Valleys of Antarctica, microorganisms colonize the pore spaces of exposed rocks and are thereby protected from the desiccating environmental conditions on the surface. These cryptoendolithic communities have received attention in microscopy and culture-based studies but have not been examined by molecular approaches. We surveyed the microbial biodiversity of selected cryptoendolithic communities by analyzing clone libraries of rRNA genes amplified from environmental DNA. Over 1,100 individual clones from two types of cryptoendolithic communities, cyanobacterium dominated and lichen dominated, were analyzed. Clones fell into 51 relatedness groups (phylotypes) with > or =98% rRNA sequence identity (46 bacterial and 5 eucaryal). No representatives of Archaea were detected. No phylotypes were shared between the two classes of endolithic communities studied. Clone libraries based on both types of communities were dominated by a relatively small number of phylotypes that, because of their relative abundance, presumably represent the main primary producers in these communities. In the lichen-dominated community, three rRNA sequences, from a fungus, a green alga, and a chloroplast, of the types known to be associated with lichens, accounted for over 70% of the clones. This high abundance confirms the dominance of lichens in this community. In contrast, analysis of the supposedly cyanobacterium-dominated community indicated, in addition to cyanobacteria, at least two unsuspected organisms that, because of their abundance, may play important roles in the community. These included a member of the alpha subdivision of the Proteobacteria that potentially is capable of aerobic anoxygenic photosynthesis and a distant relative of Deinococcus that defines, along with other Deinococcus-related sequences from Antarctica, a new clade within the Thermus-Deinococcus bacterial phylogenetic division.
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Affiliation(s)
- José R de la Torre
- Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720-3102, USA
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19
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Ascaso C, Wierzchos J. New approaches to the study of Antarctic lithobiontic microorganisms and their inorganic traces, and their application in the detection of life in Martian rocks. Int Microbiol 2002; 5:215-22. [PMID: 12497188 DOI: 10.1007/s10123-002-0088-6] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2002] [Accepted: 04/15/2002] [Indexed: 10/27/2022]
Abstract
Microbial life in the harsh conditions of Antarctica's cold desert may be considered an analogue of potential life on early Mars. In order to explore the development and survival of this epilithic and endolithic form of microbial life, our most sophisticated, state-of-the-art visualization technologies have to be used to their full potential. The study of any ecosystem requires a knowledge of its components and the processes that take place within it. If we are to understand the structure and function of each component of the microecosystems that inhabit lithic substrates, we need to be able to quantify and identify the microorganisms present in each lithobiontic ecological niche and to accurately characterize the mineralogical features of these hidden microhabitats. Once we have established the techniques that will allow us to observe and identify these microorganisms and mineral substrates in situ, and have confirmed the presence of water, the following questions can be addressed: How are the microorganisms organized in the fissures or cavities? Which microorganisms are present and how many are there? Additional questions that logically follow include: What are the existing water relationships in the microhabitat and what effects do the microorganisms have on the mineral composition? Mechanical and chemical changes in minerals and mineralization of microbial cells can give rise to physical and/or chemical traces (biomarkers) and to microbial fossil formation. In this report, we describe the detection of chains of magnetite within the Martian meteorite ALH84001, as an example of the potential use of SEM-BSE in the search for plausible traces of life on early Mars.
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Affiliation(s)
- C Ascaso
- Centro de Ciencias Medioambientales CSIC, c/ Serrano 115 bis, 28006 Madrid, Spain.
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20
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Stuelp-Campelo PM, de Oliveira MBM, Leão AMAC, Carbonero ER, Gorin PAJ, Iacomini M. Effect of a soluble alpha-D-glucan from the lichenized fungus Ramalina celastri on macrophage activity. Int Immunopharmacol 2002; 2:691-8. [PMID: 12013507 DOI: 10.1016/s1567-5769(02)00003-6] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
An alpha-glucan from the lichen Ramalina celastri has previously been demonstrated to have cytotoxic effects against HeLa cells. This polysaccharide was studied using Sarcoma-180 cells as tumoral model, and its effects on peritoneal exudate cells, namely, hydrogen peroxide production, phagocytic activity and cell eliciting activity are evaluated. Tumors developing in animals treated with the glucan at a dose of 200 mg kg(-1), had a tumor size approximately 80% smaller than that of the control group, showing an impairment of tumor establishment. The polysaccharide was injected into mice not bearing a tumor and after 7, 15 and 30 days the cells were collected from the peritonea. The number of peritoneal cells increased approximately 130% 7 days after inoculation, and then gradually decreased. Hydrogen peroxide production was 75% greater 7 and 15 days after inoculation, on in vitro phorbol myristate acetate (PMA) triggering. Without PMA, the difference in hydrogen peroxide production was not significant. Phagocytic assays using fluorescent beads showed that the uptake increased 7 and 15 days after inoculation, when compared with the control. These results thus suggest a possible role of the R. celastri glucan as a biological response modifier (BRM).
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Abstract
The study was aimed at evaluating the antioxidant activity of aqueous extract of C. islandica. The antioxidant activity, reducing power, superoxide anion radical scavenging and free radical scavenging activities were studied. The antioxidant activity increased with the increasing amount of extracts (from 50 to 500 microg) added to linoleic acid emulsion. About 50, 100, 250, and 500 microg of aqueous extract of C. islandica showed higher antioxidant activity than 500 microg of alpha-tocopherol. The samples showed 96, 99, 100, and 100% inhibition on peroxidation of linoleic acid, respectively. On the other hand, the 500 microg of alpha-tocopherol showed 77% inhibition on peroxidation on linoleic acid emulsion. Like antioxidant activity, the reducing power, superoxide anion radical scavenging and free radical scavenging activities of C. islandica depends on concentration and increasing with increased amount of sample. The results obtained in the present study indicate that C. islandica is a potential source of natural antioxidant.
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Affiliation(s)
- Ilhami Gülçin
- Department of Chemistry, Faculty of Science and Arts, Ataturk University, 25240 Erzurum, Turkey.
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22
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Czeczuga B, Lengiewicz I. Lichens of the Knyszyńska Forest (NE Poland). Rocz Akad Med Bialymst 2002; 46:263-89. [PMID: 11780570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/23/2023]
Abstract
During the period 1991-1999 the lichen species composition of 26 reserves of the Knyszyńska Forest were examined. 315 taxa, including 271 species were found. Epiphytic lichens were predominant, while epilithic species were the least common. Of the coniferous trees, pine (Pinus sylvestis) was the habitat which supported most species (67), and common larch (Larix decidua) the fewest (5). Only two species were found on juniper (Juniper communis). Of deciduous trees, the largest number of species developed on oak bark (Quercus robur) (102), the fewest on elm bark (Ulmus laevis) (2). In the case of deciduous bushes most lichen taxa were noted on hazel (Corylus avellana) (21) and only one on hawthorn (Crataegus monogyna). The commonest species were Hypogymnia physodes and Lecanora conizaeoides, which were encountered in all 26 reserves.
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Affiliation(s)
- B Czeczuga
- Department of General Biology, Medical Academy of Białystok, Białystok, Poland
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23
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Friedmann EI, Meyer MA. Antarctic cryptoendolithic microbial ecosystem research, 1986-1987. Antarct J US 2001; 22:240-1. [PMID: 11538330] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Subscribe] [Scholar Register] [Indexed: 02/21/2023]
Abstract
The apparent lifelessness of the Ross Desert is in marked contrast to the diversity of cryptoendolithic microorganisms inhabiting the interstices of sandstone rocks. The endolithic habitat provides a protective niche for lichens, bacteria, algae, and fungi, enabling them to exist in an extremely dry and cold climate. Composed solely of microorganisms living under the surface of rocks and totally lacking animals and protozoa, this ecosystem is controlled by measurable physical variables and well suited for ecosystem study and modeling. The work of the antarctic cryptoendolithic microbial ecosystem research group has involved physical measurements of nanoclimate (microbial environment inside rocks) (Friedmann, McKay, and Nienow 1987), taxonomy (Darling, Friedmann, and Broady 1987; Hale 1987), microdistribution, organism-substrate interactions including the ongoing process of fossilization (Friedmann and Weed 1987), physiological ecology, and quantification of the nitrogen economy.
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Affiliation(s)
- E I Friedmann
- Department of Biological Science, Florida State University, Tallahassee 32306-2043, USA
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24
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Friedmann EI, Hua M, Ocampo-Friedmann R. Cryptoendolithic lichen and cyanobacterial communities of the Ross Desert, Antarctica. Polarforschung 1988; 58:251-259. [PMID: 11538357] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Cryptoendolithic microbial communities in the Ross Desert (McMurdo Dry Valleys) are characterized on the basis of photosynthetic microorganisms and fungi. Two eukaryotic communities (the lichen-dominated and Hemichloris communities) and three cyanobacterial communities (the red Gloeocapsa, Hormathonema-Gloeocapsa, and Chroococcidiopsis communities) are described. Eleven coccoid, one pleurocapsoid, and five filamentous cyanobacteria occurring in these communities are characterized and illustrated. The moisture grade of the rock substrate seems to affect pH, formation of primary iron stain, and the distribution of microbial communities.
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Affiliation(s)
- E I Friedmann
- Department of Biological Science, Florida State University, Tallahassee 32306-2043, USA
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Nasemann T, Heine H, Schaeg G. [Lichen ruber lenticularis--clinical picture, histology and ultramorphology]. Z Hautkr 1979; 54:351-62. [PMID: 442752] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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26
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Culberson CF. Improved conditions and new data for the identification of lichen products by a standardized thin-layer chromatographic method. J Chromatogr A 1972; 72:113-25. [PMID: 5072880 DOI: 10.1016/0021-9673(72)80013-x] [Citation(s) in RCA: 396] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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