1
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Davidson AT, Stunkle CR, Armstrong JT, Hamman EA, McCoy MW, Vonesh JR. Warming and top-down control of stage-structured prey: Linking theory to patterns in natural systems. Ecology 2024; 105:e4213. [PMID: 38029361 DOI: 10.1002/ecy.4213] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/27/2023] [Revised: 08/01/2023] [Accepted: 10/19/2023] [Indexed: 12/01/2023]
Abstract
Warming has broad and often nonlinear impacts on organismal physiology and traits, allowing it to impact species interactions like predation through a variety of pathways that may be difficult to predict. Predictions are commonly based on short-term experiments and models, and these studies often yield conflicting results depending on the environmental context, spatiotemporal scale, and the predator and prey species considered. Thus, the accuracy of predicted changes in interaction strength, and their importance to the broader ecosystems they take place in, remain unclear. Here, we attempted to link one such set of predictions generated using theory, modeling, and controlled experiments to patterns in the natural abundance of prey across a broad thermal gradient. To do so, we first predicted how warming would impact a stage-structured predator-prey interaction in riverine rock pools between Pantala spp. dragonfly nymph predators and Aedes atropalpus mosquito larval prey. We then described temperature variation across a set of hundreds of riverine rock pools (n = 775) and leveraged this natural gradient to look for evidence for or against our model's predictions. Our model's predictions suggested that warming should weaken predator control of mosquito larval prey by accelerating their development and shrinking the window of time during which aquatic dragonfly nymphs could consume them. This was consistent with data collected in rock pool ecosystems, where the negative effects of dragonfly nymph predators on mosquito larval abundance were weaker in warmer pools. Our findings provide additional evidence to substantiate our model-derived predictions while emphasizing the importance of assessing similar predictions using natural gradients of temperature whenever possible.
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Affiliation(s)
- Andrew T Davidson
- Department of Integrative Life Sciences, Virginia Commonwealth University, Richmond, Virginia, USA
| | - C Ryland Stunkle
- Department of Integrative Life Sciences, Virginia Commonwealth University, Richmond, Virginia, USA
| | - Joshua T Armstrong
- Department of Integrative Life Sciences, Virginia Commonwealth University, Richmond, Virginia, USA
| | - Elizabeth A Hamman
- Department of Biology, St. Mary's College of Maryland, St. Mary's City, Maryland, USA
| | - Michael W McCoy
- Department of Biological Sciences, Florida Atlantic University, Fort Pierce, Florida, USA
| | - James R Vonesh
- Center for Environmental Studies, Virginia Commonwealth University, Richmond, Virginia, USA
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2
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Ortiz E, Ramos-Jiliberto R, Arim M. Prey selection along a predators' body size gradient evidences the role of different trait-based mechanisms in food web organization. PLoS One 2023; 18:e0292374. [PMID: 37797081 PMCID: PMC10553361 DOI: 10.1371/journal.pone.0292374] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Accepted: 09/19/2023] [Indexed: 10/07/2023] Open
Abstract
An increase in prey richness, prey size and predator trophic position with predator body size has been consistently reported as prime features of food web organization. These trends have been explained by non-exclusive mechanisms. First, the increase in energy demand with body size determines that larger predators must reduce prey selectivity for achieving the required number of resources, being consumption relationships independent of prey traits. Second, when consumption is restricted by gape limitation, small predators are constrained to select among small prey. However, this selection weakens over large predators, which progressively consume more and larger prey. Finally, the optimal foraging mechanism predicts that larger predators optimize their diet by selecting only large prey with high energy reward. Each one of these mechanisms can individually explain the increase in prey richness, prey size and predator trophic position with predator body size but their relative importance or the direct evidence for their combined role was seldom considered. Here we use the community assembly by trait selection (CATS) theory for evaluating the support for each one of these mechanisms based on the prey selection patterns that they predict. We analyzed how prey body size and trophic guild determine prey selection by predators of increasing body size in a killifish guild from a temporary pond system. Results support the combination of the three mechanisms to explain the structural trends in our food web, although their strength is contingent on prey trophic group. Overall, high energy prey are preferred by larger predators, and small predators select small prey of all trophic status. However, large predators prefer large primary producers and avoid large carnivorous prey, probably because of the inherent risk of consuming other carnivorous. Our study provides a mechanistic understanding of how predator traits determine the selection of prey traits affecting food web assembly.
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Affiliation(s)
- Esteban Ortiz
- Departamento de Ecología y Gestión Ambiental-Centro Universitario Regional del Este, Universidad de la República, Maldonado, Uruguay
| | | | - Matías Arim
- Departamento de Ecología y Gestión Ambiental-Centro Universitario Regional del Este, Universidad de la República, Maldonado, Uruguay
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3
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Gupta A, Furrer R, Petchey OL. Simultaneously estimating food web connectance and structure with uncertainty. Ecol Evol 2022; 12:e8643. [PMID: 35342563 PMCID: PMC8928887 DOI: 10.1002/ece3.8643] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2021] [Revised: 11/29/2021] [Accepted: 12/22/2021] [Indexed: 11/23/2022] Open
Abstract
Food web models explain and predict the trophic interactions in a food web, and they can infer missing interactions among the organisms. The allometric diet breadth model (ADBM) is a food web model based on the foraging theory. In the ADBM, the foraging parameters are allometrically scaled to body sizes of predators and prey. In Petchey et al. (Proceedings of the National Academy of Sciences, 2008; 105: 4191), the parameterization of the ADBM had two limitations: (a) the model parameters were point estimates and (b) food web connectance was not estimated. The novelty of our current approach is: (a) We consider multiple predictions from the ADBM by parameterizing it with approximate Bayesian computation, to estimate parameter distributions and not point estimates. (b) Connectance emerges from the parameterization, by measuring model fit using the true skill statistic, which takes into account prediction of both the presences and absences of links. We fit the ADBM using approximate Bayesian computation to 12 observed food webs from a wide variety of ecosystems. Estimated connectance was consistently greater than previously found. In some of the food webs, considerable variation in estimated parameter distributions occurred and resulted in considerable variation (i.e., uncertainty) in predicted food web structure. These results lend weight to the possibility that the observed food web data is missing some trophic links that do actually occur. It also seems likely that the ADBM likely predicts some links that do not exist. The latter could be addressed by accounting in the ADBM for additional traits other than body size. Further work could also address the significance of uncertainty in parameter estimates for predicted food web responses to environmental change.
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Affiliation(s)
- Anubhav Gupta
- Department of Evolutionary Biology and Environmental StudiesUniversity of ZurichZurichSwitzerland
| | - Reinhard Furrer
- Department of Mathematics and Department of Computational ScienceUniversity of ZurichZurichSwitzerland
| | - Owen L. Petchey
- Department of Evolutionary Biology and Environmental StudiesUniversity of ZurichZurichSwitzerland
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4
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Gallina S, Contreras A, Álvarez-Peredo C, Saucedo-Castillo E, García-Feria L, Flores-Romero C, Tejeda-Cruz C, Ortega-Argueta A, Pineda-Vázquez M. Contribution of wildlife management units to the conservation of terrestrial mammals in southeastern Mexico. Mamm Biol 2022. [DOI: 10.1007/s42991-021-00220-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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5
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Wootton KL, Curtsdotter A, Roslin T, Bommarco R, Jonsson T. Towards a modular theory of trophic interactions. Funct Ecol 2021. [DOI: 10.1111/1365-2435.13954] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Kate L. Wootton
- Department of Ecology Swedish University of Agricultural Sciences Uppsala Sweden
- Biofrontiers Institute University of Colorado Boulder CO USA
| | - Alva Curtsdotter
- Insect Ecology Lab, Zoology The University of New England Armidale NSW Australia
| | - Tomas Roslin
- Department of Ecology Swedish University of Agricultural Sciences Uppsala Sweden
| | - Riccardo Bommarco
- Department of Ecology Swedish University of Agricultural Sciences Uppsala Sweden
| | - Tomas Jonsson
- Department of Ecology Swedish University of Agricultural Sciences Uppsala Sweden
- Ecological Modelling Group University of Skövde Skövde Sweden
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6
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Hatton IA, Heneghan RF, Bar-On YM, Galbraith ED. The global ocean size spectrum from bacteria to whales. SCIENCE ADVANCES 2021; 7:eabh3732. [PMID: 34757796 PMCID: PMC8580314 DOI: 10.1126/sciadv.abh3732] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2021] [Accepted: 09/14/2021] [Indexed: 05/31/2023]
Abstract
It has long been hypothesized that aquatic biomass is evenly distributed among logarithmic body mass size classes. Although this community structure has been observed regionally, mostly among plankton groups, its generality has never been formally tested across all marine life over the global ocean, nor have the impacts of humans on it been globally assessed. Here, we bring together data at the global scale to test the hypothesis from bacteria to whales. We find that biomass within most order of magnitude size classes is indeed remarkably constant, near 1 gigatonne (Gt) wet weight (1015 g), but bacteria and large marine mammals are markedly above and below this value, respectively. Furthermore, human impacts appear to have significantly truncated the upper one-third of the spectrum. This dramatic alteration to what is possibly life’s largest-scale regularity underscores the global extent of human activities.
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Affiliation(s)
- Ian A. Hatton
- Max Planck Institute for Mathematics in the Sciences, Leipzig 04103, Germany
- Institut de Ciència i Tecnologia Ambientals (ICTA), Universitat Autonoma de Barcelona, Barcelona, Spain
| | - Ryan F. Heneghan
- Institut de Ciència i Tecnologia Ambientals (ICTA), Universitat Autonoma de Barcelona, Barcelona, Spain
- School of Mathematical Sciences, Queensland University of Technology, Brisbane, QD 4000, Australia
| | - Yinon M. Bar-On
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, 76100 Rehovot, Israel
| | - Eric D. Galbraith
- Institut de Ciència i Tecnologia Ambientals (ICTA), Universitat Autonoma de Barcelona, Barcelona, Spain
- Department of Earth and Planetary Sciences, McGill University, Montreal, QC H3A 0E8, Canada
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7
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Wesner JS, Pomeranz JPF. Choosing priors in Bayesian ecological models by simulating from the prior predictive distribution. Ecosphere 2021. [DOI: 10.1002/ecs2.3739] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
Affiliation(s)
- Jeff S. Wesner
- Department of Biology University of South Dakota Vermillion South Dakota 57069 USA
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8
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Dynamic population stage structure due to juvenile-adult asymmetry stabilizes complex ecological communities. Proc Natl Acad Sci U S A 2021; 118:2023709118. [PMID: 34021084 PMCID: PMC8166188 DOI: 10.1073/pnas.2023709118] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Natural ecological communities are diverse, complex, and often surprisingly stable, but the mechanisms underlying their stability remain a theoretical enigma. Interactions such as competition and predation presumably structure communities, yet theory predicts that complex communities are stable only when species growth rates are mostly limited by intraspecific self-regulation rather than by interactions with resources, competitors, and predators. Current theory, however, considers only the network topology of population-level interactions between species and ignores within-population differences, such as between juvenile and adult individuals. Here, using model simulations and analysis, I show that including commonly observed differences in vulnerability to predation and foraging efficiency between juvenile and adult individuals results in up to 10 times larger, more complex communities than observed in simulations without population stage structure. These diverse communities are stable or fluctuate with limited amplitude, although in the model only a single basal species is self-regulated, and the population-level interaction network is highly connected. Analysis of the species interaction matrix predicts the simulated communities to be unstable but for the interaction with the population-structure subsystem, which completely cancels out these instabilities through dynamic changes in population stage structure. Common differences between juveniles and adults and fluctuations in their relative abundance may hence have a decisive influence on the stability of complex natural communities and their vulnerability when environmental conditions change. To explain community persistence, it may not be sufficient to consider only the network of interactions between the constituting species.
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9
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Magioli M, Ferraz KMPMDB, Chiarello AG, Galetti M, Setz EZF, Paglia AP, Abrego N, Ribeiro MC, Ovaskainen O. Land-use changes lead to functional loss of terrestrial mammals in a Neotropical rainforest. Perspect Ecol Conserv 2021. [DOI: 10.1016/j.pecon.2021.02.006] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
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10
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McLeod AM, Leroux SJ. The multiple meanings of omnivory influence empirical, modular theory and whole food web stability relationships. J Anim Ecol 2020; 90:447-459. [PMID: 33073862 DOI: 10.1111/1365-2656.13378] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2019] [Accepted: 10/14/2020] [Indexed: 11/28/2022]
Abstract
The persistence of whole communities hinges on the presence of select interactions which act to stabilize communities making the identification of these keystone interactions critical. One potential candidate is omnivory, yet theoretical research on omnivory thus far has been dominated by a modular theory approach whereby an omnivore and consumer compete for a shared resource. Empirical research, however, has highlighted the presence of a broader suite of omnivory modules. Here, we integrate empirical data analysis and mathematical models to explore the influence of both omnivory module (including classic, multi-resource, higher level, mutual predation and cannibalism) and omnivore-resource interaction type on food web stability. We use six classic empirical food webs to examine the prevalence of the different types of omnivory, a multi-species consumer-resource model to determine the stability of these different kinds of omnivory within a module context, and finally extend these models to a 50 species, whole food web model to examine the influence of omnivory on whole food web persistence. Our results challenge the concept that omnivory is broadly stabilizing. In particular, we demonstrate that the impact of omnivory depends on the type of omnivory being examined with multi-resource omnivory having the largest correlation with whole food web persistence. Moreover, our results highlight that we need to exercise caution when scaling modular theory to whole food web theory. Cannibalism, for example, was the most persistent and stable omnivory module in the modular theory analysis, but only demonstrated a weak correlation with whole food web persistence. Lastly, our results demonstrate that the frequency of omnivory modules are more important for whole food web persistence than the frequency of omnivore-resource interactions. Together, these results demonstrate that the role of omnivory often depends both on the type of omnivory being examined and the food web within which it is nested. In whole food web models, omnivory acts less as a keystone interaction, rather, specific types of omnivory, particularly multi-resource omnivory, act as keystone modules. Future work integrating module and whole food web theory is critical for resolving the role of key interactions in food webs.
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Affiliation(s)
- Anne M McLeod
- Department of Biology, Memorial University of Newfoundland, St. John's, NL, Canada
| | - Shawn J Leroux
- Department of Biology, Memorial University of Newfoundland, St. John's, NL, Canada
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11
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Girardot B, Gauduchon M, Ménard F, Poggiale JC. Does evolution design robust food webs? Proc Biol Sci 2020; 287:20200747. [PMID: 32605512 DOI: 10.1098/rspb.2020.0747] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Theoretical works that use a dynamical approach to study the ability of ecological communities to resist perturbations are largely based on randomly generated ecosystem structures. By contrast, we ask here whether the evolutionary history of food webs matters for their robustness. Using a community evolution model, we first generate trophic networks by varying the level of energy supply (richness) of the environment in which species adapt and diversify. After placing our simulation outputs in perspective with present-day food webs empirical data, we highlight the complex, structuring role of this environmental condition during the evolutionary setting up of trophic networks. We then assess the robustness of food webs by studying their short-term ecological responses to swift changes in their customary environmental richness. We reveal that the past conditions have a crucial effect on the robustness of current food webs. Moreover, directly focusing on connectance of evolved food webs, it turns out that the most connected ones appear to be the least robust to sharp depletion in the environmental energy supply. Finally, we appraise the 'adaptation' of food webs themselves: generally poor, except in relation to a diversity of flux property.
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Affiliation(s)
- B Girardot
- Aix Marseille University, Univ Toulon, CNRS, IRD, Mediterranean Institute of Oceanography, MIO, UM110 Marseille, France
| | - M Gauduchon
- Aix Marseille University, Univ Toulon, CNRS, IRD, Mediterranean Institute of Oceanography, MIO, UM110 Marseille, France
| | - F Ménard
- Aix Marseille University, Univ Toulon, CNRS, IRD, Mediterranean Institute of Oceanography, MIO, UM110 Marseille, France
| | - J C Poggiale
- Aix Marseille University, Univ Toulon, CNRS, IRD, Mediterranean Institute of Oceanography, MIO, UM110 Marseille, France
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12
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Blanco‐Torres A, Duré MI, Bonilla MA, Cagnolo L. Predator–prey interactions in anurans of the tropical dry forests of the Colombian Caribbean: A functional approach. Biotropica 2020. [DOI: 10.1111/btp.12779] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Argelina Blanco‐Torres
- Grupo de investigación en Biología de Organismos Tropicales Universidad Nacional de Colombia Bogotá Colombia
- Departamento de Ciencias Naturales y Exactas Universidad de la Costa Barranquilla Colombia
| | - Marta I. Duré
- Centro de Ecología Aplicada del Litoral CECOAL– CONICET- UNNE Corrientes Argentina
| | - Maria Argenis Bonilla
- Grupo de investigación en Biología de Organismos Tropicales Universidad Nacional de Colombia Bogotá Colombia
| | - Luciano Cagnolo
- Instituto Multidisciplinario de Biología Vegetal UNC‐CONICET Córdoba Argentina
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13
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Thompson MSA, Pontalier H, Spence MA, Pinnegar JK, Greenstreet SPR, Moriarty M, Hélaouët P, Lynam CP. A feeding guild indicator to assess environmental change impacts on marine ecosystem structure and functioning. J Appl Ecol 2020. [DOI: 10.1111/1365-2664.13662] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Murray S. A. Thompson
- Lowestoft Laboratory Centre for Environment, Fisheries and Aquaculture Science (Cefas) Lowestoft Suffolk UK
| | - Hugo Pontalier
- Lowestoft Laboratory Centre for Environment, Fisheries and Aquaculture Science (Cefas) Lowestoft Suffolk UK
| | - Michael A. Spence
- Lowestoft Laboratory Centre for Environment, Fisheries and Aquaculture Science (Cefas) Lowestoft Suffolk UK
| | - John K. Pinnegar
- Lowestoft Laboratory Centre for Environment, Fisheries and Aquaculture Science (Cefas) Lowestoft Suffolk UK
| | | | - Meadhbh Moriarty
- Marine Scotland Science Aberdeen UK
- Environmental Sciences Research Institute Ulster University Coleraine UK
| | | | - Christopher P. Lynam
- Lowestoft Laboratory Centre for Environment, Fisheries and Aquaculture Science (Cefas) Lowestoft Suffolk UK
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14
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Newbold T, Bentley LF, Hill SLL, Edgar MJ, Horton M, Su G, Şekercioğlu ÇH, Collen B, Purvis A. Global effects of land use on biodiversity differ among functional groups. Funct Ecol 2020. [DOI: 10.1111/1365-2435.13500] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Tim Newbold
- Centre for Biodiversity & Environment Research Department of Genetics, Evolution and Environment University College London London UK
| | - Laura F. Bentley
- UN Environment World Conservation Monitoring Centre Cambridge UK
| | - Samantha L. L. Hill
- UN Environment World Conservation Monitoring Centre Cambridge UK
- Department of Life Sciences Natural History Museum London UK
| | | | - Matthew Horton
- Department of Life Sciences Imperial College London London UK
| | - Geoffrey Su
- Department of Life Sciences Imperial College London London UK
| | - Çağan H. Şekercioğlu
- Department of Biology University of Utah Salt Lake City UT USA
- College of Sciences Koç University Istanbul Turkey
| | - Ben Collen
- Centre for Biodiversity & Environment Research Department of Genetics, Evolution and Environment University College London London UK
| | - Andy Purvis
- Department of Life Sciences Natural History Museum London UK
- Department of Life Sciences Imperial College London London UK
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15
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Compson ZG, Monk WA, Hayden B, Bush A, O'Malley Z, Hajibabaei M, Porter TM, Wright MTG, Baker CJO, Al Manir MS, Curry RA, Baird DJ. Network-Based Biomonitoring: Exploring Freshwater Food Webs With Stable Isotope Analysis and DNA Metabarcoding. Front Ecol Evol 2019. [DOI: 10.3389/fevo.2019.00395] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
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16
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Windsor FM, Pereira MG, Tyler CR, Ormerod SJ. Persistent contaminants as potential constraints on the recovery of urban river food webs from gross pollution. WATER RESEARCH 2019; 163:114858. [PMID: 31325703 DOI: 10.1016/j.watres.2019.114858] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2019] [Revised: 07/12/2019] [Accepted: 07/12/2019] [Indexed: 05/09/2023]
Abstract
Urban areas contribute substantially to xenobiotic contaminant loads in rivers, but their effects have been investigated more for individual organisms and sensitive taxa, rather than through the emergent properties of communities. Here, we use replicated, catchment-scale sampling of benthic invertebrates and novel multivariate techniques to assess whether urban wastewater contaminants affected the structure and function of river food webs. We postulated that the continued occurrence of selected contaminants in river systems might explain the incomplete recovery of urban rivers from legacy gross pollution. Benthic invertebrate communities were sampled monthly over a year (2016-2017) at 18 sites across 3 river systems in South Wales (United Kingdom). Contaminant sources were characterised using remote sensing, water quality data from routine monitoring and measured concentrations of selected persistent xenobiotic pollutants (polychlorinated biphenyls and polybrominated diphenyl ethers). Urban wastewater discharges had relatively limited effects on river water quality, with small increases in nitrate, phosphate, temperature, conductivity and total dissolved solids in urban systems. Concentrations of polychlorinated biphenyls and polybrominated diphenyl ethers in invertebrates, however, were significantly higher under greater urban land cover and wastewater discharge. Food webs at the most highly contaminated urban sites were characterised by: (i) reduced taxonomic and functional diversity; (ii) simplified food web structure with reduced network connectance; and (iii) reductions in the abundance of prey important for apex predators such as the Eurasian dipper (Cinclus cinclus). Although correlative and partially confounded by other effects, these data provide support for the hypothesis that impairment to food webs resulting from urban pollutants might explain population, community and ecosystem-level effects in urban river systems, and hence incomplete recovery from past pollution.
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Affiliation(s)
- Fredric M Windsor
- School of Biosciences, Cardiff University, UK; Department of Biosciences, University of Exeter, UK.
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17
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Mizsei E, Boros Z, Lovas‐Kiss Á, Szepesváry C, Szabolcs M, Rák G, Ujszegi J, Gál Z, Lengyel S, Puskás G. A trait‐based framework for understanding predator–prey relationships: Trait matching between a specialist snake and its insect prey. Funct Ecol 2019. [DOI: 10.1111/1365-2435.13446] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Edvárd Mizsei
- Department of Tisza River Research Danube Research Institute Centre for Ecological Research Hungarian Academy of Sciences Debrecen Hungary
- Department of Ecology University of Debrecen Debrecen Hungary
| | | | - Ádám Lovas‐Kiss
- Department of Tisza River Research Danube Research Institute Centre for Ecological Research Hungarian Academy of Sciences Debrecen Hungary
| | - Csaba Szepesváry
- Department of Tisza River Research Danube Research Institute Centre for Ecological Research Hungarian Academy of Sciences Debrecen Hungary
- GINOP Sustainable Ecosystems Group Centre for Ecological Research Hungarian Academy of Sciences Tihany Hungary
| | - Márton Szabolcs
- Department of Tisza River Research Danube Research Institute Centre for Ecological Research Hungarian Academy of Sciences Debrecen Hungary
- GINOP Sustainable Ecosystems Group Centre for Ecological Research Hungarian Academy of Sciences Tihany Hungary
| | - Gergő Rák
- Department of Ecology University of Veterinary Medicine Budapest Hungary
| | - János Ujszegi
- Lendület Evolutionary Ecology Research Group Plant Protection Institute Centre for Agricultural Research Hungarian Academy of Sciences Budapest Hungary
| | - Zoltán Gál
- NARIC Agricultural Biotechnology Institute Gödöllő Hungary
| | - Szabolcs Lengyel
- Department of Tisza River Research Danube Research Institute Centre for Ecological Research Hungarian Academy of Sciences Debrecen Hungary
- GINOP Sustainable Ecosystems Group Centre for Ecological Research Hungarian Academy of Sciences Tihany Hungary
| | - Gellért Puskás
- Department of Zoology Hungarian Natural History Museum Budapest Hungary
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18
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Abstract
The ecological importance of common species for many ecosystem processes and functions is unquestionably due to their high abundance. Yet, the importance of rare species is much less understood. Here we take a theoretical approach, exposing dynamical models of ecological networks to small perturbations, to explore the dynamical importance of rare and common species. We find that both species types contribute to the recovery of communities following generic perturbations (i.e. perturbations affecting all species). Yet, when perturbations are selective (i.e. affects only one species), perturbations to rare species have the most pronounced effect on community stability. We show that this is due to the strong indirect effects induced by perturbations to rare species. Because indirect effects typically set in at longer timescales, our results indicate that the importance of rare species may be easily overlooked and thus underrated. Hence, our study provides a potential ecological motive for the management and protection of rare species.
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19
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Pawar S, Dell AI, Lin T, Wieczynski DJ, Savage VM. Interaction Dimensionality Scales Up to Generate Bimodal Consumer-Resource Size-Ratio Distributions in Ecological Communities. Front Ecol Evol 2019. [DOI: 10.3389/fevo.2019.00202] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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20
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Loeuille N. Eco-evolutionary dynamics in a disturbed world: implications for the maintenance of ecological networks. F1000Res 2019; 8:F1000 Faculty Rev-97. [PMID: 30728953 PMCID: PMC6347037 DOI: 10.12688/f1000research.15629.1] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 01/17/2019] [Indexed: 11/20/2022] Open
Abstract
Past management of exploited species and of conservation issues has often ignored the evolutionary dynamics of species. During the 70s and 80s, evolution was mostly considered a slow process that may be safely ignored for most management issues. However, in recent years, examples of fast evolution have accumulated, suggesting that time scales of evolutionary dynamics (variations in genotype frequencies) and of ecological dynamics (variations in species densities) are often largely comparable, so that complex feedbacks commonly exist between the ecological and the evolutionary context ("eco-evolutionary dynamics"). While a first approach is of course to consider the evolution of a given species, in ecological communities, species are interlinked by interaction networks. In the present article, I discuss how species (co)evolution in such a network context may alter our understanding and predictions for species coexistence, given the disturbed world we live in. I review some concepts and examples suggesting that evolution may enhance the robustness of ecological networks and then show that, in many situations, the reverse may also happen, as evolutionary dynamics can harm diversity maintenance in various ways. I particularly focus on how evolution modifies indirect effects in ecological networks, then move to coevolution and discuss how the outcome of coevolution for species coexistence depends on the type of interaction (mutualistic or antagonistic) that is considered. I also review examples of phenotypes that are known to be important for ecological networks and shown to vary rapidly given global changes. Given all these components, evolution produces indirect eco-evolutionary effects within networks that will ultimately influence the optimal management of the current biodiversity crisis.
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Affiliation(s)
- Nicolas Loeuille
- iEES Paris (UMR7618), Sorbonne Université, CNRS, 4 Place Jussieu, 75005 Paris, France
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21
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Portalier SMJ, Fussmann GF, Loreau M, Cherif M. The mechanics of predator–prey interactions: First principles of physics predict predator–prey size ratios. Funct Ecol 2018. [DOI: 10.1111/1365-2435.13254] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
| | | | - Michel Loreau
- Centre for Biodiversity Theory and Modelling, Theoretical and Experimental Ecology StationCNRS and Paul Sabatier University Moulis France
| | - Mehdi Cherif
- Department of Ecology and Environmental SciencesUmeå University Umeå Sweden
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22
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Schalk CM, Cove MV. Squamates as prey: Predator diversity patterns and predator-prey size relationships. FOOD WEBS 2018. [DOI: 10.1016/j.fooweb.2018.e00103] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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23
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Thorp CJ, Alexander ME, Vonesh JR, Measey J. Size-dependent functional response of Xenopus laevis feeding on mosquito larvae. PeerJ 2018; 6:e5813. [PMID: 30386704 PMCID: PMC6204824 DOI: 10.7717/peerj.5813] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2018] [Accepted: 09/21/2018] [Indexed: 11/29/2022] Open
Abstract
Predators can play an important role in regulating prey abundance and diversity, determining food web structure and function, and contributing to important ecosystem services, including the regulation of agricultural pests and disease vectors. Thus, the ability to predict predator impact on prey is an important goal in ecology. Often, predators of the same species are assumed to be functionally equivalent, despite considerable individual variation in predator traits known to be important for shaping predator–prey interactions, like body size. This assumption may greatly oversimplify our understanding of within-species functional diversity and undermine our ability to predict predator effects on prey. Here, we examine the degree to which predator–prey interactions are functionally homogenous across a natural range of predator body sizes. Specifically, we quantify the size-dependence of the functional response of African clawed frogs (Xenopus laevis) preying on mosquito larvae (Culex pipiens). Three size classes of predators, small (15–30 mm snout-vent length), medium (50–60 mm) and large (105–120 mm), were presented with five densities of prey to determine functional response type and to estimate search efficiency and handling time parameters generated from the models. The results of mesocosm experiments showed that type of functional response of X. laevis changed with size: small predators exhibited a Type II response, while medium and large predators exhibited Type III responses. Functional response data showed an inversely proportional relationship between predator attack rate and predator size. Small and medium predators had highest and lowest handling time, respectively. The change in functional response with the size of predator suggests that predators with overlapping cohorts may have a dynamic impact on prey populations. Therefore, predicting the functional response of a single size-matched predator in an experiment may misrepresent the predator’s potential impact on a prey population.
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Affiliation(s)
- Corey J Thorp
- Centre for Invasion Biology, Department of Botany & Zoology, Stellenbosch University, Stellenbosch, South Africa
| | - Mhairi E Alexander
- Centre for Invasion Biology, Department of Botany & Zoology, Stellenbosch University, Stellenbosch, South Africa.,Institute for Biomedical and Environmental Health Research (IBEHR), School of Health and Life Sciences, University of the West of Scotland, Paisley, UK
| | - James R Vonesh
- Centre for Invasion Biology, Department of Botany & Zoology, Stellenbosch University, Stellenbosch, South Africa.,Department of Biology, Virginia Commonwealth University, Richmond, VA, USA.,Center for Environmental Studies, Virginia Commonwealth University, Richmond, VA, USA
| | - John Measey
- Centre for Invasion Biology, Department of Botany & Zoology, Stellenbosch University, Stellenbosch, South Africa
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Monteiro AB, Faria LDB. Matching consumer feeding behaviours and resource traits: a fourth-corner problem in food-web theory. Ecol Lett 2018; 21:1237-1243. [PMID: 29877014 DOI: 10.1111/ele.13096] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2017] [Revised: 01/02/2018] [Accepted: 05/12/2018] [Indexed: 11/30/2022]
Abstract
For decades, food web theory has proposed phenomenological models for the underlying structure of ecological networks. Generally, these models rely on latent niche variables that match the feeding behaviour of consumers with their resource traits. In this paper, we used a comprehensive database to evaluate different hypotheses on the best dependency structure of trait-matching patterns between consumers and resource traits. We found that consumer feeding behaviours had complex interactions with resource traits; however, few dimensions (i.e. latent variables) could reproduce the trait-matching patterns. We discuss our findings in the light of three food web models designed to reproduce the multidimensionality of food web data; additionally, we discuss how using species traits clarify food webs beyond species pairwise interactions and enable studies to infer ecological generality at larger scales, despite potential taxonomic differences, variations in ecological conditions and differences in species abundance between communities.
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Abstract
Assortative mixing in networks is the tendency for nodes with the same attributes, or metadata, to link to each other. It is a property often found in social networks, manifesting as a higher tendency of links occurring between people of the same age, race, or political belief. Quantifying the level of assortativity or disassortativity (the preference of linking to nodes with different attributes) can shed light on the organization of complex networks. It is common practice to measure the level of assortativity according to the assortativity coefficient, or modularity in the case of categorical metadata. This global value is the average level of assortativity across the network and may not be a representative statistic when mixing patterns are heterogeneous. For example, a social network spanning the globe may exhibit local differences in mixing patterns as a consequence of differences in cultural norms. Here, we introduce an approach to localize this global measure so that we can describe the assortativity, across multiple scales, at the node level. Consequently, we are able to capture and qualitatively evaluate the distribution of mixing patterns in the network. We find that, for many real-world networks, the distribution of assortativity is skewed, overdispersed, and multimodal. Our method provides a clearer lens through which we can more closely examine mixing patterns in networks.
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Affiliation(s)
- Leto Peel
- Institute of Information and Communication Technologies, Electronics and Applied Mathematics (ICTEAM), Université Catholique de Louvain, Louvain-la-Neuve B-1348, Belgium;
- Namur Institute for Complex Systems (naXys), Université de Namur, Namur B-5000, Belgium
| | - Jean-Charles Delvenne
- Institute of Information and Communication Technologies, Electronics and Applied Mathematics (ICTEAM), Université Catholique de Louvain, Louvain-la-Neuve B-1348, Belgium;
- Center for Operations Research and Econometrics (CORE), Université Catholique de Louvain, Louvain-la-Neuve B-1348, Belgium
| | - Renaud Lambiotte
- Mathematical Institute, University of Oxford, Oxford OX2 6GG, United Kingdom
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26
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Gaeta JW, Ahrenstorff TD, Diana JS, Fetzer WW, Jones TS, Lawson ZJ, McInerny MC, Santucci VJ, Vander Zanden MJ. Go big or … don't? A field-based diet evaluation of freshwater piscivore and prey fish size relationships. PLoS One 2018; 13:e0194092. [PMID: 29543856 PMCID: PMC5854328 DOI: 10.1371/journal.pone.0194092] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2017] [Accepted: 02/25/2018] [Indexed: 11/18/2022] Open
Abstract
Body size governs predator-prey interactions, which in turn structure populations, communities, and food webs. Understanding predator-prey size relationships is valuable from a theoretical perspective, in basic research, and for management applications. However, predator-prey size data are limited and costly to acquire. We quantified predator-prey total length and mass relationships for several freshwater piscivorous taxa: crappie (Pomoxis spp.), largemouth bass (Micropterus salmoides), muskellunge (Esox masquinongy), northern pike (Esox lucius), rock bass (Ambloplites rupestris), smallmouth bass (Micropterus dolomieu), and walleye (Sander vitreus). The range of prey total lengths increased with predator total length. The median and maximum ingested prey total length varied with predator taxon and length, but generally ranged from 10–20% and 32–46% of predator total length, respectively. Predators tended to consume larger fusiform prey than laterally compressed prey. With the exception of large muskellunge, predators most commonly consumed prey between 16 and 73 mm. A sensitivity analysis indicated estimates can be very accurate at sample sizes greater than 1,000 diet items and fairly accurate at sample sizes greater than 100. However, sample sizes less than 50 should be evaluated with caution. Furthermore, median log10 predator-prey body mass ratios ranged from 1.9–2.5, nearly 50% lower than values previously reported for freshwater fishes. Managers, researchers, and modelers could use our findings as a tool for numerous predator-prey evaluations from stocking size optimization to individual-based bioenergetics analyses identifying prey size structure. To this end, we have developed a web-based user interface to maximize the utility of our models that can be found at www.LakeEcologyLab.org/pred_prey.
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Affiliation(s)
- Jereme W. Gaeta
- Department of Watershed Sciences and the Ecology Center, Utah State University, Logan, Utah, United States of America
- * E-mail:
| | - Tyler D. Ahrenstorff
- Minnesota Department of Natural Resources, Brainerd, Minnesota, United States of America
| | - James S. Diana
- School of Natural Resources and the Environment, University of Michigan, Ann Arbor, Michigan, United States of America
| | - William W. Fetzer
- Wisconsin Department of Natural Resources, Madison, Wisconsin, United States of America
| | - Thomas S. Jones
- Minnesota Department of Natural Resources, Aitkin, Minnesota, United States of America
| | - Zach J. Lawson
- Wisconsin Department of Natural Resources, Mercer, Wisconsin, United States of America
| | - Michael C. McInerny
- Minnesota Department of Natural Resources, Glenwood, Minnesota, United States of America
| | - Victor J. Santucci
- Lake Michigan Program, Illinois Department of Natural Resources, Des Plaines, Illinois, United States of America
| | - M. Jake Vander Zanden
- Center for Limnology, University of Wisconsin – Madison, Madison, Wisconsin, United States of America
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27
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Linking DNA Metabarcoding and Text Mining to Create Network-Based Biomonitoring Tools: A Case Study on Boreal Wetland Macroinvertebrate Communities. ADV ECOL RES 2018. [DOI: 10.1016/bs.aecr.2018.09.001] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
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28
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Gibert JP, Allen RL, Hruska RJ, DeLong JP. The ecological consequences of environmentally induced phenotypic changes. Ecol Lett 2017; 20:997-1003. [DOI: 10.1111/ele.12797] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2017] [Revised: 03/30/2017] [Accepted: 05/15/2017] [Indexed: 11/26/2022]
Affiliation(s)
- Jean P. Gibert
- School of Biological Sciences University of Nebraska–Lincoln Lincoln Nebraska68588 USA
| | - Rachel L. Allen
- School of Biological Sciences University of Nebraska–Lincoln Lincoln Nebraska68588 USA
| | - Ron J. Hruska
- School of Biological Sciences University of Nebraska–Lincoln Lincoln Nebraska68588 USA
| | - John P. DeLong
- School of Biological Sciences University of Nebraska–Lincoln Lincoln Nebraska68588 USA
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29
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Ziegler JP, Gregory-Eaves I, Solomon CT. Refuge increases food chain length: modeled impacts of littoral structure in lake food webs. OIKOS 2017. [DOI: 10.1111/oik.03517] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Jacob P. Ziegler
- Dept of Natural Resource Sciences, McGill Univ.; Montreal, 21111 Lakeshore Road Ste. Anne de Bellevue; QC H9X 3V9 Canada
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30
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Rossiter W, King G, Johnson B. Revisiting the Energetic Efficiency Hypothesis: Body Mass, Metabolism, and Food Chain Length. AMERICAN MIDLAND NATURALIST 2017. [DOI: 10.1674/0003-0031-177.1.1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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31
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Nakazawa T. Individual interaction data are required in community ecology: a conceptual review of the predator–prey mass ratio and more. Ecol Res 2016. [DOI: 10.1007/s11284-016-1408-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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32
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Newman MEJ, Clauset A. Structure and inference in annotated networks. Nat Commun 2016; 7:11863. [PMID: 27306566 PMCID: PMC4912639 DOI: 10.1038/ncomms11863] [Citation(s) in RCA: 97] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2016] [Accepted: 05/05/2016] [Indexed: 02/02/2023] Open
Abstract
For many networks of scientific interest we know both the connections of the network and information about the network nodes, such as the age or gender of individuals in a social network. Here we demonstrate how this 'metadata' can be used to improve our understanding of network structure. We focus in particular on the problem of community detection in networks and develop a mathematically principled approach that combines a network and its metadata to detect communities more accurately than can be done with either alone. Crucially, the method does not assume that the metadata are correlated with the communities we are trying to find. Instead, the method learns whether a correlation exists and correctly uses or ignores the metadata depending on whether they contain useful information. We demonstrate our method on synthetic networks with known structure and on real-world networks, large and small, drawn from social, biological and technological domains.
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Affiliation(s)
- M. E. J. Newman
- Department of Physics, University of Michigan, 450 Church Street, Ann Arbor, Michigan 48109, USA
- Center for the Study of Complex Systems, University of Michigan, 450 Church Street, Ann Arbor, Michigan 48109, USA
- Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, New Mexico 87501, USA
| | - Aaron Clauset
- Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, New Mexico 87501, USA
- Department of Computer Science, University of Colorado, 430 UCB, Boulder, Colorado 80309, USA
- BioFrontiers Institute, University of Colorado, 596 UCB, Boulder, Colorado 80309, USA
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33
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Tsai C, Hsieh C, Nakazawa T. Predator–prey mass ratio revisited: does preference of relative prey body size depend on individual predator size? Funct Ecol 2016. [DOI: 10.1111/1365-2435.12680] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Cheng‐Han Tsai
- AIMS@JCU Australian Institute of Marine Science and College of Marine and Environmental Sciences DB17‐063 James Cook University Townsville Queensland 4811 Australia
| | - Chih‐hao Hsieh
- Institute of Oceanography and Institute of Ecology and Evolutionary Biology National Taiwan University No.1, Sec. 4, Roosevelt Road Taipei 106 Taiwan
| | - Takefumi Nakazawa
- Department of Life Sciences National Cheng Kung University No.1, University Road Tainan 701 Taiwan
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34
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Joining the dots: An automated method for constructing food webs from compendia of published interactions. FOOD WEBS 2015. [DOI: 10.1016/j.fooweb.2015.09.001] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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35
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Berlow EL, Wieters EA, Joppa LN, Wood SA, Brose U, Navarrete SA. Network structure beyond food webs: mapping non-trophic and trophic interactions on Chilean rocky shores. Ecology 2015; 96:291-303. [PMID: 26236914 DOI: 10.1890/13-1424.1] [Citation(s) in RCA: 93] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
How multiple types of non-trophic interactions map onto trophic networks in real communities remains largely unknown. We present the first effort, to our knowledge, describing a comprehensive ecological network that includes all known trophic and diverse non-trophic links among >100 coexisting species for the marine rocky intertidal community of the central Chilean coast. Our results suggest that non-trophic interactions exhibit highly nonrandom structures both alone and with respect to food web structure. The occurrence of different types of interactions, relative to all possible links, was well predicted by trophic structure and simple traits of the source and target species. In this community, competition for space and positive interactions related to habitat/refuge provisioning by sessile and/or basal species were by far the most abundant non-trophic interactions. If these patterns are orroborated in other ecosystems, they may suggest potentially important dynamic constraints on the combined architecture of trophic and non-trophic interactions. The nonrandom patterning of non-trophic interactions suggests a path forward for developing a more comprehensive ecological network theory to predict the functioning and resilience of ecological communities.
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36
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Abstract
The stability of ecological systems has been a long-standing focus of ecology. Recently, tools from random matrix theory have identified the main drivers of stability in ecological communities whose network structure is random. However, empirical food webs differ greatly from random graphs. For example, their degree distribution is broader, they contain few trophic cycles, and they are almost interval. Here we derive an approximation for the stability of food webs whose structure is generated by the cascade model, in which 'larger' species consume 'smaller' ones. We predict the stability of these food webs with great accuracy, and our approximation also works well for food webs whose structure is determined empirically or by the niche model. We find that intervality and broad degree distributions tend to stabilize food webs, and that average interaction strength has little influence on stability, compared with the effect of variance and correlation.
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37
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Dell AI, Zhao L, Brose U, Pearson RG, Alford RA. Population and Community Body Size Structure Across a Complex Environmental Gradient. ADV ECOL RES 2015. [DOI: 10.1016/bs.aecr.2015.02.002] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/20/2023]
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38
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39
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Rohr RP, Bascompte J. Components of Phylogenetic Signal in Antagonistic and Mutualistic Networks. Am Nat 2014; 184:556-64. [DOI: 10.1086/678234] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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40
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Global biotic interactions: An open infrastructure to share and analyze species-interaction datasets. ECOL INFORM 2014. [DOI: 10.1016/j.ecoinf.2014.08.005] [Citation(s) in RCA: 124] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
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41
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Lawson AM, Weir JT. Latitudinal gradients in climatic-niche evolution accelerate trait evolution at high latitudes. Ecol Lett 2014; 17:1427-36. [PMID: 25168260 DOI: 10.1111/ele.12346] [Citation(s) in RCA: 68] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2014] [Revised: 07/12/2014] [Accepted: 07/28/2014] [Indexed: 11/26/2022]
Abstract
Despite the importance of divergent selection to the speed of evolution, it remains poorly understood if divergent selection is more prevalent in the tropics (where species richness is highest), or at high latitudes (where paleoclimate change has been most intense). We tested whether the rate of climatic-niche evolution - one proxy for divergent selection - varies with latitude for 111 pairs of bird species. Using Brownian motion and Ornsetin-Ulhenbeck models, we show that evolutionary rates along two important axes of the climatic-niche - temperature and seasonality - have been faster at higher latitudes. We then tested whether divergence of the climatic-niche was associated with evolution in traits important in ecological differentiation (body mass) and reproductive isolation (song), and found that climatic divergence is associated with faster rates in both measures. These results highlight the importance of climate-mediated divergent selection pressures in driving evolutionary divergence and reproductive isolation at high latitudes.
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Affiliation(s)
- Adam M Lawson
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, M1C 1A4, Canada
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42
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Gray C, Baird DJ, Baumgartner S, Jacob U, Jenkins GB, O'Gorman EJ, Lu X, Ma A, Pocock MJO, Schuwirth N, Thompson M, Woodward G. FORUM: Ecological networks: the missing links in biomonitoring science. J Appl Ecol 2014; 51:1444-1449. [PMID: 25558087 PMCID: PMC4278451 DOI: 10.1111/1365-2664.12300] [Citation(s) in RCA: 81] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2014] [Accepted: 06/03/2014] [Indexed: 11/30/2022]
Abstract
Monitoring anthropogenic impacts is essential for managing and conserving ecosystems, yet current biomonitoring approaches lack the tools required to deal with the effects of stressors on species and their interactions in complex natural systems. Ecological networks (trophic or mutualistic) can offer new insights into ecosystem degradation, adding value to current taxonomically constrained schemes. We highlight some examples to show how new network approaches can be used to interpret ecological responses. Synthesis and applications. Augmenting routine biomonitoring data with interaction data derived from the literature, complemented with ground‐truthed data from direct observations where feasible, allows us to begin to characterise large numbers of ecological networks across environmental gradients. This process can be accelerated by adopting emerging technologies and novel analytical approaches, enabling biomonitoring to move beyond simple pass/fail schemes and to address the many ecological responses that can only be understood from a network‐based perspective.
Augmenting routine biomonitoring data with interaction data derived from the literature, complemented with ground‐truthed data from direct observations where feasible, allows us to begin to characterise large numbers of ecological networks across environmental gradients. This process can be accelerated by adopting emerging technologies and novel analytical approaches, enabling biomonitoring to move beyond simple pass/fail schemes and to address the many ecological responses that can only be understood from a network‐based perspective.
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Affiliation(s)
- Clare Gray
- School of Biological and Chemical Sciences, Queen Mary University of London London, E1 4NS, UK ; Department of Life Sciences, Silwood Park, Imperial College London Buckhurst Road, Ascot, Berkshire, SL5 7PY, UK
| | - Donald J Baird
- Department of Biology, Environment Canada @ Canadian Rivers Institute, University of New Brunswick 10 Bailey Drive, P.O. Box 4400, Fredericton, NB, E3B 5A3, Canada
| | - Simone Baumgartner
- Eawag-Swiss Federal Institute of Aquatic Science and Technology 8600, Dübendorf, Switzerland
| | - Ute Jacob
- Institute for Hydrobiology and Fisheries Science, University of Hamburg Grosse Elbstrasse 133, 22767 Hamburg, Germany
| | - Gareth B Jenkins
- School of Biological and Chemical Sciences, Queen Mary University of London London, E1 4NS, UK
| | - Eoin J O'Gorman
- Department of Life Sciences, Silwood Park, Imperial College London Buckhurst Road, Ascot, Berkshire, SL5 7PY, UK
| | - Xueke Lu
- School of Electronic Engineering and Computer Science, Queen Mary University of London London, E1 4NS, UK
| | - Athen Ma
- School of Electronic Engineering and Computer Science, Queen Mary University of London London, E1 4NS, UK
| | - Michael J O Pocock
- Centre for Ecology & Hydrology Maclean Building, Benson Lane, Crowmarsh Gifford, Wallingford, Oxfordshire, OX10 8BB, UK
| | - Nele Schuwirth
- Eawag-Swiss Federal Institute of Aquatic Science and Technology 8600, Dübendorf, Switzerland
| | - Murray Thompson
- Department of Life Sciences, Silwood Park, Imperial College London Buckhurst Road, Ascot, Berkshire, SL5 7PY, UK
| | - Guy Woodward
- Department of Life Sciences, Silwood Park, Imperial College London Buckhurst Road, Ascot, Berkshire, SL5 7PY, UK
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43
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Tang S, Pawar S, Allesina S. Correlation between interaction strengths drives stability in large ecological networks. Ecol Lett 2014; 17:1094-100. [DOI: 10.1111/ele.12312] [Citation(s) in RCA: 88] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2014] [Revised: 04/30/2014] [Accepted: 05/09/2014] [Indexed: 11/30/2022]
Affiliation(s)
- Si Tang
- Department of Ecology & Evolution; University of Chicago; Chicago IL 60637 USA
| | - Samraat Pawar
- Department of Ecology & Evolution; University of Chicago; Chicago IL 60637 USA
| | - Stefano Allesina
- Department of Ecology & Evolution; University of Chicago; Chicago IL 60637 USA
- Computation Institute; University of Chicago; Chicago IL 60637 USA
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44
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Jonsson T. Trophic links and the relationship between predator and prey body sizes in food webs. COMMUNITY ECOL 2014. [DOI: 10.1556/comec.15.2014.1.6] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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45
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Harfoot MBJ, Newbold T, Tittensor DP, Emmott S, Hutton J, Lyutsarev V, Smith MJ, Scharlemann JPW, Purves DW. Emergent global patterns of ecosystem structure and function from a mechanistic general ecosystem model. PLoS Biol 2014; 12:e1001841. [PMID: 24756001 PMCID: PMC3995663 DOI: 10.1371/journal.pbio.1001841] [Citation(s) in RCA: 137] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2013] [Accepted: 03/10/2014] [Indexed: 11/18/2022] Open
Abstract
This paper presents the first mathematical model that attempts to represent the biology and behavior of all individual organisms globally, taking us a step closer to holistic ecological and conservation science founded on mechanistic predictions. Anthropogenic activities are causing widespread degradation of ecosystems worldwide, threatening the ecosystem services upon which all human life depends. Improved understanding of this degradation is urgently needed to improve avoidance and mitigation measures. One tool to assist these efforts is predictive models of ecosystem structure and function that are mechanistic: based on fundamental ecological principles. Here we present the first mechanistic General Ecosystem Model (GEM) of ecosystem structure and function that is both global and applies in all terrestrial and marine environments. Functional forms and parameter values were derived from the theoretical and empirical literature where possible. Simulations of the fate of all organisms with body masses between 10 µg and 150,000 kg (a range of 14 orders of magnitude) across the globe led to emergent properties at individual (e.g., growth rate), community (e.g., biomass turnover rates), ecosystem (e.g., trophic pyramids), and macroecological scales (e.g., global patterns of trophic structure) that are in general agreement with current data and theory. These properties emerged from our encoding of the biology of, and interactions among, individual organisms without any direct constraints on the properties themselves. Our results indicate that ecologists have gathered sufficient information to begin to build realistic, global, and mechanistic models of ecosystems, capable of predicting a diverse range of ecosystem properties and their response to human pressures. Ecosystems across the world are being rapidly degraded. This threatens their provision of natural goods and services, upon which all life depends. To be able to reduce—and one day reverse—this damage, we need to be able to predict the effects of human actions on ecosystems. Here, we present the first example of a General Ecosystem Model (GEM)—called the Madingley Model—a novel class of computational model that can be applied to any ecosystem, marine or terrestrial, and can be simulated at any spatial scale from local up to global. It covers almost all organisms in ecosystems, from the smallest to the largest, encoding the underlying biology and behaviour of individual organisms to capture the interactions between them and with the environment, to model the fate of each individual organism, and to make predictions about ecosystem structure and function. Predictions made by the Madingley Model broadly resemble what we observe in real-world ecosystems across scales from individuals through to communities, ecosystems, and the world as a whole. Our results show that ecologists can now begin modelling all nonhuman life on earth, and we suggest that this type of approach may hold promise for predicting the ecological implications of different future trajectories of human activity on our shared planet.
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Affiliation(s)
- Michael B. J. Harfoot
- United Nations Environment Programme World Conservation Monitoring Centre, Cambridge, United Kingdom
- Computational Science Laboratory, Microsoft Research, Cambridge, United Kingdom
- * E-mail:
| | - Tim Newbold
- United Nations Environment Programme World Conservation Monitoring Centre, Cambridge, United Kingdom
- Computational Science Laboratory, Microsoft Research, Cambridge, United Kingdom
| | - Derek P. Tittensor
- United Nations Environment Programme World Conservation Monitoring Centre, Cambridge, United Kingdom
- Computational Science Laboratory, Microsoft Research, Cambridge, United Kingdom
- Dalhousie University, Halifax, Nova Scotia, Canada
| | - Stephen Emmott
- Computational Science Laboratory, Microsoft Research, Cambridge, United Kingdom
| | - Jon Hutton
- United Nations Environment Programme World Conservation Monitoring Centre, Cambridge, United Kingdom
| | - Vassily Lyutsarev
- Computational Science Laboratory, Microsoft Research, Cambridge, United Kingdom
| | - Matthew J. Smith
- Computational Science Laboratory, Microsoft Research, Cambridge, United Kingdom
| | - Jörn P. W. Scharlemann
- United Nations Environment Programme World Conservation Monitoring Centre, Cambridge, United Kingdom
- School of Life Sciences, University of Sussex, Falmer, Brighton, United Kingdom
| | - Drew W. Purves
- Computational Science Laboratory, Microsoft Research, Cambridge, United Kingdom
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Capitán JA, Arenas A, Guimerà R. Degree of intervality of food webs: From body-size data to models. J Theor Biol 2013; 334:35-44. [DOI: 10.1016/j.jtbi.2013.06.004] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2013] [Revised: 06/01/2013] [Accepted: 06/04/2013] [Indexed: 11/26/2022]
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Gravel D, Poisot T, Albouy C, Velez L, Mouillot D. Inferring food web structure from predator-prey body size relationships. Methods Ecol Evol 2013. [DOI: 10.1111/2041-210x.12103] [Citation(s) in RCA: 148] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Dominique Gravel
- Département de biologie, chimie et géographie; Université du Québec à Rimouski; 300 Allée des Ursulines G5L 3A1 Québec Canada
- Québec Centre for Biodiversity Science
| | - Timothée Poisot
- Département de biologie, chimie et géographie; Université du Québec à Rimouski; 300 Allée des Ursulines G5L 3A1 Québec Canada
- Québec Centre for Biodiversity Science
| | - Camille Albouy
- UMR CNRS-UM2-IRD-IFREMER 5119 ECOSYM; Université Montpellier 2, CC 093 34095 Montpellier Cedex5 France
- Laboratoire Ecosystèmes Marins Exploités UMR 212; IRD, IFREMER, UMII, UMI; avenue Jean Monnet BP171 34203 Sete Cedex France
| | - Laure Velez
- UMR CNRS-UM2-IRD-IFREMER 5119 ECOSYM; Université Montpellier 2, CC 093 34095 Montpellier Cedex5 France
| | - David Mouillot
- UMR CNRS-UM2-IRD-IFREMER 5119 ECOSYM; Université Montpellier 2, CC 093 34095 Montpellier Cedex5 France
- ARC Centre of Excellence for Coral Reef Studies; James Cook University; Townsville Qld 4811 Australia
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Klecka J, Boukal DS. Foraging and vulnerability traits modify predator-prey body mass allometry: freshwater macroinvertebrates as a case study. J Anim Ecol 2013; 82:1031-41. [DOI: 10.1111/1365-2656.12078] [Citation(s) in RCA: 64] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2012] [Accepted: 02/26/2013] [Indexed: 11/26/2022]
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Grazing and detritivory in 20 stream food webs across a broad pH gradient. Oecologia 2012; 171:459-71. [PMID: 22996363 PMCID: PMC3548098 DOI: 10.1007/s00442-012-2421-x] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2012] [Accepted: 07/17/2012] [Indexed: 12/03/2022]
Abstract
Acidity is a major driving variable in the ecology of fresh waters, and we sought to quantify macroecological patterns in stream food webs across a wide pH gradient. We postulated that a few generalist herbivore-detritivores would dominate the invertebrate assemblage at low pH, with more specialists grazers at high pH. We also expected a switch towards algae in the diet of all primary consumers as the pH increased. For 20 stream food webs across the British Isles, spanning pH 5.0–8.4 (the acid sites being at least partially culturally acidified), we characterised basal resources and primary consumers, using both gut contents analysis and stable isotopes to study resource use by the latter. We found considerable species turnover across the pH gradient, with generalist herbivore-detritivores dominating the primary consumer assemblage at low pH and maintaining grazing. These were joined or replaced at higher pH by a suite of specialist grazers, while many taxa that persisted across the pH gradient broadened the range of algae consumed as acidity declined and increased their ingestion of biofilm, whose nutritional quality was higher than that of coarse detritus. There was thus an increased overall reliance on algae at higher pH, both by generalist herbivore-detritivores and due to the presence of specialist grazers, although detritus was important even in non-acidic streams. Both the ability of acid-tolerant, herbivore-detritivores to exploit both autochthonous and allochthonous food and the low nutritional value of basal resources might render chemically recovering systems resistant to invasion by the specialist grazers and help explain the sluggish ecological recovery of fresh waters whose water chemistry has ameliorated.
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Klecka J, Boukal DS. Who eats whom in a pool? A comparative study of prey selectivity by predatory aquatic insects. PLoS One 2012; 7:e37741. [PMID: 22679487 PMCID: PMC3367957 DOI: 10.1371/journal.pone.0037741] [Citation(s) in RCA: 73] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2011] [Accepted: 04/23/2012] [Indexed: 11/26/2022] Open
Abstract
Predatory aquatic insects are a diverse group comprising top predators in small fishless water bodies. Knowledge of their diet composition is fragmentary, which hinders the understanding of mechanisms maintaining their high local diversity and of their impacts on local food web structure and dynamics. We conducted multiple-choice predation experiments using nine common species of predatory aquatic insects, including adult and larval Coleoptera, adult Heteroptera and larval Odonata, and complemented them with literature survey of similar experiments. All predators in our experiments fed selectively on the seven prey species offered, and vulnerability to predation varied strongly between the prey. The predators most often preferred dipteran larvae; previous studies further reported preferences for cladocerans. Diet overlaps between all predator pairs and predator overlaps between all prey pairs were non-zero. Modularity analysis separated all primarily nectonic predator and prey species from two groups of large and small benthic predators and their prey. These results, together with limited evidence from the literature, suggest a highly interconnected food web with several modules, in which similarly sized predators from the same microhabitat are likely to compete strongly for resources in the field (observed Pianka’s diet overlap indices >0.85). Our experiments further imply that ontogenetic diet shifts are common in predatory aquatic insects, although we observed higher diet overlaps than previously reported. Hence, individuals may or may not shift between food web modules during ontogeny.
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Affiliation(s)
- Jan Klecka
- Department of Ecosystems Biology, Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic.
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