Paper-based colorimetric sensor using Photoshop and a smartphone app for the quantitative detection of carbofuran

We developed a smartphone-assisted microchemistry analyzer for the quantitative detection of carbofuran using a paper-based colorimetric sensor, Photoshop software, and a smartphone app. The changes in color of the carbofuran enzymatic reaction in the paper-based sensor were captured and analyzed using a smartphone-controlled analyzer with an LED light source and a smartphone camera. The high accuracy of this method was demonstrated for the determination of carbofuran with a linear response in the range 0.05-1.0 ppm and limits of detection (LOD) of 0.02 and 0.018 ppm using Photoshop and smartphone app colorimetric analysis, respectively. These two methods not only show the high sensitivity and highly quantitative relationships between the concentrations of commercial carbofuran and characteristic color values of the blue channel in smartphone images but were also applied to infusions of tea. Moreover, the smartphone app is able to GPS tag the location of the test and transmit the results to a website that displays quantitative results from carbofuran samples on a map.

Heterogeneity of otolith chemical composition from two-dimensional mapping: Relationship with biomineralization mechanisms and implications for microchemistry analyses

Although otoliths are widely used as archives to infer life-history traits and habitat use in fishes, their biomineralization process remains poorly understood. This lack of knowledge is problematic as it can lead to misinterpretation of the different types of signals (e.g., optical or chemical) that provide basic data for research in fish ecology, fisheries management, and species conservation. Otolith calcification relies on a complex system involving a pericrystalline fluid, the endolymph, whose organic and inorganic compositions are spatially heterogeneous for some constituents. This property stems from the particular structure of the calcifying saccular epithelium. In this study, we explored the spatial heterogeneity of elemental incorporation in otoliths for two species of high economic interest, European hake Merluccius merluccius (L. 1758) and European sea bass Dicentrarchus labrax (L. 1758). Two-dimensional mappings of chemical elements were obtained using UV high-repetition-rate femtosecond laser ablation (fs-LA) system coupled to a high-resolution inductively coupled plasma sector field mass spectrometer analyses on transverse sections of sagittae. Results highlighted a clear asymmetry between proximal (sulcus) and distal (antisulcus) concentrations for elements such as magnesium (Mg), phosphorus (P), manganese (Mn), and potassium (K) with concentration gradient directions that varied depending on the element. Strontium (Sr) and barium (Ba) did not show a proximo-distal gradient. These results are discussed in light of current knowledge on the endolymph composition and the mechanisms that lead to its compartmentalization, highlighting the need for further research on otolith biomineralization. Operational implications for studies based on otolith chemical composition are also discussed with emphasis on advice for sampling strategies to avoid analytical biases and the need for in-depth analyses of analytical settings before comparing otolith signatures between species or geographical areas.

Otolith microchemistry reveals diverse habitat uses and migratory patterns of two Coilia species (Engraulidae) in the Min River Estuary, southern China

A recent study based on gonad histology revealed that the existence of the spawning grounds for Gray's grenadier anchovy (Coilia grayii) and Osbeck's grenadier anchovy (C. mystus) in the Min River Estuary, the largest in Fujian Province, southern China. Further confirming their natal sources and migratory patterns is essential to understand their life histories. We used otolith microchemistry to assess the origins and habitat uses of 23 C. grayii and 22 C. mystus, collected the Min River Estuary and the adjacent waters. The results showed that C. grayii spawned in both freshwater (n‍ = 14) and brackish water (n = 9), and C. mystus spawned mainly in brackish water (n‍ = 20) with minor in freshwater (n‍ = 1) and marine water (n‍ = 1). The migratory patterns of C. grayii (four types) and C. mystus (five types) were diverse, mainly exhibiting anadromous and semi-anadromous behaviors. The first migratory behavior of C. grayii and C. mystus occurred within the age of the first year. The findings have significant implications for fishery stock management of the Min River Estuary and its adjacent waters.

Otolith microchemistry of freshwater indigenous minor carp (Bangana dero) as a biomonitoring tool to trace heavy metals in River Sutlej, Ropar Wetland (Ramsar site), Punjab, India

The elemental composition of the fish otolith may represent a permanent record of the environmental condition the fish inhabited. Fish otolith grows incrementally from the core to a marginal region that acts as a repository of trace metal signatures. The present study explores the potential application of otolith microchemistry of the benthopelagic indigenous minor carp Bangana dero sampled from the Ropar wetland on River Sutlej, Punjab. The concentration of sixteen metals was evaluated in the otolith (n = 42) and water (n = 48) for the post-monsoon and pre-monsoon season from 2020 to 2022 using inductively coupled plasma mass spectrometry (ICP-MS) followed by element detection in the core and marginal region of whole otolith, using energy-dispersive mass spectroscopy (EDS). All the heavy metals exhibited an increase in metal concentrations in fish otolith than water during the post-monsoon season. By indices approach, the otolith was found to have a high bioaccumulation factor for Se in the post-monsoon and Hg in the pre-monsoon. Certain trace metals like As and Hg exhibited fluctuations in their core and marginal region. Thus, trace metal patterns in the otolith could act as a potential tool for monitoring the seasonal changes of metals in water bodies. The EFHg, EFSe and EFAs in the fish otolith predicted its anthropogenic source, while the remaining studied elements showed ambient water origin. Thus, using the otoliths of Bangana dero as a long-term monitoring tool in the future may be helpful for environmental assessments and the reconstruction of historical exposure for safeguarding of water bodies.

A microscale soft ionic power source modulates neuronal network activity

Bio-integrated devices need power sources to operate1,2. Despite widely used technologies that can provide power to large-scale targets, such as wired energy supplies from batteries or wireless energy transduction3, a need to efficiently stimulate cells and tissues on the microscale is still pressing. The ideal miniaturized power source should be biocompatible, mechanically flexible and able to generate an ionic current for biological stimulation, instead of using electron flow as in conventional electronic devices4-6. One approach is to use soft power sources inspired by the electrical eel7,8; however, power sources that combine the required capabilities have not yet been produced, because it is challenging to obtain miniaturized units that both conserve contained energy before usage and are easily triggered to produce an energy output. Here we develop a miniaturized soft power source by depositing lipid-supported networks of nanolitre hydrogel droplets that use internal ion gradients to generate energy. Compared to the original eel-inspired design7, our approach can shrink the volume of a power unit by more than 105-fold and it can store energy for longer than 24 h, enabling operation on-demand with a 680-fold greater power density of about 1,300 W m-3. Our droplet device can serve as a biocompatible and biological ionic current source to modulate neuronal network activity in three-dimensional neural microtissues and in ex vivo mouse brain slices. Ultimately, our soft microscale ionotronic device might be integrated into living organisms.

3D (x-y-t) Raman imaging of tomato fruit cuticle: Microchemistry during development

The cuticle is a protective extracellular matrix that covers the above-ground epidermis of land plants. Here, we studied the cuticle of tomato (Solanum lycopersicum L.) fruits in situ using confocal Raman microscopy. Microsections from cuticles isolated at different developmental stages were scanned to visualize cuticle components with a spatial resolution of 342 nm by univariate and multivariate data analysis. Three main components, cutin, polysaccharides, and aromatics, were identified, with the latter exhibiting the strongest Raman scattering intensity. Phenolic acids and flavonoids were differentiated within the cuticle, and three schematic cuticle models were identified during development. Phenolic acids were found across the entire cuticle at the earliest stage of development, i.e. during the formation of the procuticle layer. Based on a mixture analysis with reference component spectra, the phenolic acids were identified as mainly esterified p-coumaric acid together with free p-hydroxybenzoic acid. During the cell expansion period of growth, phenolic acids accumulated in an outermost layer of the cuticle and in the middle region of the pegs. In these stages of development, cellulose and pectin were detected next to the inner cuticle region, close to the epidermal cell where flavonoid impregnation started during ripening. In the first ripening stage, chalconaringenin was observed, while methoxylated chalcones were chosen by the algorithm to fit the mature cuticle spectra. The colocation of carbohydrates, esterified p-coumaric acid, and methoxylated chalconaringenin suggests that the latter two link polysaccharide and cutin domains. Elucidating the different distribution of aromatics within the cuticle, suggests important functions: (1) overall impregnation conferring mechanical and thermal functions (2) the outermost phenolic acid layer displaying UV-B protection of the plant tissue.

European flounder foraging movements in an estuarine nursery seascape inferred from otolith microchemistry and stable isotopes

Despite the importance of estuarine nurseries in the regulation of many fish stocks, temporal and spatial movements and habitat use patterns of juvenile fish remain poorly understood. Overall, combining several movement metrics allowed us to characterize dispersal patterns of juvenile flounder, Platichthys flesus, along an estuarine seascape. Specifically, we investigated otolith microchemistry signatures (Sr:Ca and Ba:Ca ratios) and stable isotope ratios (δ13C and δ15N) in muscles of these juveniles, during three consecutive years to assess inter-annual fluctuations in their home range and isotopic niches. The morphological condition and lipid content of individuals were lower in years of high as compared to low dispersal along the estuarine gradient. We discuss these results in relation to the ecosystem productivity and intra- and inter-specific competition level, which in turn affects movements and foraging behaviors of juvenile flounders.

Multivariate analysis of otolith microchemistry can discriminate the source of oil contamination in exposed fish

The uptake of metals into the aragonite lattice of the fish otolith (ear-bone) has been used for decades as a historical record of exposure to metals in polluted environments. The relative abundance of two metals in particular, Ni and V, are used in forensic chemical analysis of crude oils to assist in confirming its origin. In this study we investigate the potential for metal accumulation in otoliths to act as a biomarker of exposure to crude oil. Using a 33-day static-renewal laboratory trial design, 56 juvenile Lates calcarifer (commonly known as Asian seabass or barramundi) were fed diets enriched with V (20 mg/kg), Ni (500 mg/kg), Fe (500 mg/kg), and two crude oils with distinctly different metals profiles: a heavy fuel oil (1% w/w) and a typical Australian medium crude (1% w/w). Fish exposed to crude oils showed Ba and Al retained in otoliths in a dose-dependent manner, but fish fed V-, Ni- and Fe-enriched diets showed no metal increase in otoliths, indicating that V, Ni and Fe are not incorporated into the otolith of L. calcarifer via dietary exposure. For crude oils, incorporation into otolith for many metals is likely limited due to porphyrin casing reducing their bioavailability. Principal components analysis (PCA) and subsequent linear discriminatory analysis (LDA) of selected otolith metals demonstrated that, even despite large variability in the metal abundances detected in otolith between individuals within the test groups (cv = 1.00), it is possible to discriminate between fish exposed to different crude oils using multivariate analysis of their otolith microchemistry.

Fish otolith microchemistry as a biomarker of the world's largest mining disaster

The Fundão dam collapse occurred in late 2015, resulting in the largest disaster in the world involving mine tailings, releasing at least 50 million m³ of iron ore tailings into the Doce river basin (Brazil). Studies realized along the Doce river after the disaster showed high concentrations of some elements above recommended Brazilian standards in different environmental matrices such as Al, Ba, Co, Fe, Hg, Mn, and Ni. This study aims to test the hypothesis that otolith microchemistry can be used as a pollution biomarker over time, that is, the otoliths sampled in the directly impacted area (Doce estuary) will present higher concentrations of the chemical elements in relation to the two other indirectly impacted estuaries (Ipiranga and São Mateus). The marine catfish Genidens genidens was chosen as a sentinel species, as this species presents several features that characterize it as a key species of the estuarine environment. The hypothesis was tested from a comparison between estuaries of the element/Ca ratios (Ba, Fe, and Mn) from the otolith edge (representing more recent deposition) and through the elemental composition profile, from core to edge of otolith. For the otolith edge analyses, it was possible to determine significant differences between estuaries in all three element:Ca ratios (Ba, Fe, and Mn). For the profile analysis (from core to edge), the Doce river showed consistent concentrations of Fe:Ca and Ba:Ca ratios higher than those of the Ipiranga and São Mateus estuaries throughout the life of the fish. In otoliths sampled in the Doce estuary, the possible identified peak of the Ba:Ca and Mn:Ca ratios, was probably associated with the Fundão Dam disaster. The present study showed that otolith microchemistry can be used as a sclerochronological biomarker of metallic aquatic pollution.

Habitat use and nursery evaluation for the longnose stingray Hypanus guttatus (Bloch & Schneider, 1801) using vertebral microchemistry

Here, we use vertebral microchemistry to investigate the habitat use patterns of the longnose stingray Hypanus guttatus in the northern and northeastern regions of Brazil, and to evaluate the existence of potential nurseries of the species. Samples were collected in Maranhão, Rio Grande do Norte and Pernambuco states between 2008 and 2019. Trace element concentrations of Ba:Ca, Mg:Ca, Mn:Ca and Sr:Ca in vertebrae were determined through laser ablation inductively coupled plasma mass spectrometry. We used one-step permutational ANOVAs to evaluate multi and single-element differences in element:Ca ratios among life stages and sexes across and within sites. Element signatures differed among all sites for both single and multi-element settings. However, there were few differences among life stages within sites, except for Mn:Ca between life stages for Maranhão state, and between sexes for Sr:Ca for both Pernambuco and Rio Grande do Norte, and Ba:Ca for Rio Grande do Norte. Furthermore, all multi and single-element analyses across locations were significant and highlight the strong differences by sites. We also performed a nonmetric multidimensional scaling analysis, which demonstrated the strong differences for samples from Rio Grande do Norte and the other two sites. By analysing the lifetime transects of each sample, we observed that there was little variation in all element:Ca ratios within sites. Therefore, we argue that the longnose stingray likely does not display extensive habitat use shifts and fulfils much of its life cycle within each area. Finally, we obtained no evidence of nurseries for any site and suggest this is likely a pattern across the species distribution. Future studies investigating habitat use with samples from larger specimens (disc width > 90 cm, >15 years) are needed to better understand the species habitat use patterns across all size ranges.

Study on the pharmacokinetics of mulberry fruit polysaccharides through fluorescence labeling

A sensitive and efficient fluorescence labeling method was developed and validated for the microanalysis and detection of polysaccharides. Fluorescein isothiocyanate (FITC) was successfully labeled on mulberry fruit polysaccharides (MFP) through a reductive amination reaction with the assistant of tyramine. The fluorescent labeled polysaccharides (FMFP) was identified by fluorescence, UV-visible, flourier transform infrared (FT-IR) and 1H NMR spectrum. Results demonstrated that the labeling efficiency of FMFP was 0.32%, and the FMFP was stable in simulated digestion fluid without cytotoxicity. The pharmacokinetics and biodistribution after administration were analyzed in rats, which indicated that the FMFP obtained could be absorbed in a short time (tmax 0.50 h) but eliminated slowly (t1/2 8.77 ± 1.38 h). At 24 h after administration, the polysaccharide could be tested mainly in intestine, stomach, liver and kidney. The FITC labeling method lays a foundation for investigating the absorption and metabolism of MFP, and provides references for the microanalysis research of bioactive polysaccharides.

Retracing migration pattern in reproductive and non-reproductive female kutum Rutilus frisii, in south Caspian Sea, using otolith microchemistry

Because trace elements of otoliths are considered a natural marker capable of recognizing the chemical composition of ambient water and fish migration history, these elements could be potentially used to analyse the movement of reproductive (R) and non-reproductive (NR) mature-sized fish. Supposedly, it is not essential for NR individuals to migrate to rivers for spawning because they do not have developed gonads. To investigate the potential differences in migration history between female R and NR kutum, Rutilus frisii, in the southwest waters of the Caspian Sea, the ratios of Sr, Ba, Mg, Na, K and P to Ca in otoliths (from the core to the edge) were examined using laser ablation-inductively coupled plasma-mass spectrometry. In NR fish, a significant increase in Sr:Ca ratio in the otoliths' growth rings, likely due to greater seawater residency, and an increase in Ba:Ca ratio in the last two rings were observed. Increased Ba:Ca ratio could be due to the movement of NR mature-sized fish to the coastal zones for foraging. Seasonal physiological factors such as gonad maturation and spawning activity are more likely to be involved in differences in the other elemental ratios (Mg, Na, K and P). These results suggest that microchemical analyses of growth rings of otolith can be used as a valuable tool for better understanding the movement pattern of different types of adult fish, which could be completed with data from other methods like tagging.

Assessment of spawning site fidelity in interior Fraser River Coho salmon Oncorhynchus kisutch using otolith microchemistry, in British Columbia, Canada

Coho Salmon Oncorhynchus kisutch show fidelity to natal spawning watersheds. Fine-scale homing, however, within rivers is not well understood. Interior Fraser Coho (IFC) salmon eggs were incubated at known spawning locations in the Coldwater River, two main stem sites and one-off channel pond site, providing otolith reference data for comparison to otolith signatures for returning adults using laser ablation inductively coupled plasma mass spectrometry. Elemental ratios for Ba:Ca and Sr:Ca in otoliths of juvenile O. kisutch differed significantly among the spawning locations examined. Juvenile otolith data were used to conduct a linear discriminant analysis to assess fine-scale homing in adults. Juvenile data were all assigned to the location where they had been incubated, producing a robust data set used to compare adult otoliths and define natal locations based on elemental signatures in otoliths of adult spawners. Homing and straying were apparent at the reach level; 57.1% of adults returned to their natal spawning locations, while 42.9% strayed to other spawning sites within the Coldwater River. Straying to novel incubation sites at the reach scale demonstrated plasticity in homing within a watershed.

Quantifying an overlooked aspect of partial migration using otolith microchemistry

For the first time, an overlooked aspect of partial migration was quantified using otolith microchemistry and brown trout, Salmo trutta, as a model species. Relative contributions of freshwater resident and anadromous female brown trout to mixed-stock sea trout populations in the Baltic Sea were estimated. Out of 236 confirmed wild sea trout sampled around the coast of Estonia 88% were of anadromous maternal origin and 12% were of resident maternal origin. This novel finding underscores the importance of the resident contingent in maintaining the persistence and resilience of the migratory contingent.

White mullet Mugil curema population structure from Mexico and Brazil revealed by otolith chemistry

The white mullet Mugil curema supports several fisheries in the neotropical region; nevertheless, the population structure is still elusive. The aim of this study was to assess the presence of adult management units and nursery areas from five sampling sites throughout the Gulf of Mexico and northern Brazil using otolith microchemistry. The Li/Ca, Na/Ca, Mn/Ca, Sr/Ca, Ba/Ca and Pb/Ca ratios were measured in otolith core (juvenile stage) and edge (adult stage) (N = 131) using laser ablation-inductively coupled plasma-mass spectrometry. Several ratios were significantly different between sampling sites for core and edge (P < 0.05). For otolith edge, permutational multivariate analysis of variance showed significant differences (P < 0.05) between all sampling sites from Mexico (except between Mecoacán and Tamiahua, P > 0.05) and between Mexico (pooled samples) and Brazil. Quadratic discriminant analyses showed jackknifed classification higher in the edge (66.6% and 99.5% for Mexico and Brazil plus Mexico, respectively) than in the core (46.3% and 76.5% Mexico and Brazil plus Mexico, respectively). The two cluster analyses based on the core microchemistry (Mexico and Brazil plus Mexico) produced three main clusters, which did not coincide with catchment areas. These results support the segregation of the M. curema adult life stages among several sampling sites from Mexico and Brazil; moreover, core analysis suggested that the nursery areas did not correspond to the capture sites or adults stocks.

Microfluidics for real-time direct monitoring of self- and co-assembly biomolecular processes

Molecular self-assembly is a major approach for the fabrication of functional supramolecular nanomaterials. This dynamic, straightforward, bottom-up procedure may result in the formation of various architectures at the nano-scale, with remarkable physical and chemical characteristics. Biological and bio-inspired building blocks are especially attractive due to their intrinsic tendency to assemble into well-organized structures, as well as their inherent biocompatibility. To further expand the morphological diversity, co-assembly methods have been developed, allowing to produce alternative unique architectures, enhanced properties, and improved structural control. However, in many cases, mechanistic understanding of the self- and co-assembly processes is still lacking. Microfluidic techniques offer a set of exclusive tools for real-time monitoring of biomolecular self-organization, which is crucial for the study of such dynamic processes. Assembled nuclei, confined by micron-scale pillars, could be subjected to controlled environments aiming to assess the effect of different conditions on the assembly process. Other microfluidics setups can produce droplets at a rate of over 100 s^-1, with volumes as small as several picoliters. Under these conditions, each droplet can serve as an individual pico/nano-reactor allowing nucleation and assembly. These processes can be monitored, analyzed and imaged, by various techniques including simple bright-field microscopy. Elucidating the mechanism of such molecular events may serve as a conceptual stepping-stone for the rational control of the resulting physicochemical properties.

Leave forever or return home? The case of the whitemouth croaker Micropogonias furnieri in coastal systems of southeastern Brazil indicated by otolith microchemistry

Movements of coastal fish species between estuarine systems (rearing grounds) and adjacent platforms (spawning grounds) are complex and can be influenced by multiple biotic and abiotic factors associated with the life cycle of each species. Understanding fish movement patterns between these habitats is crucial for sustainable management of these resources. We aimed to identify movement patterns of the whitemouth croaker Micropogonias furnieri, an important fishery resource along the southeastern Brazilian coast, through characterization of elemental concentration profiles in otoliths. Signal intensity ratios of Sr⁸⁶:Ca⁴³ and Ba¹³⁸:Ca⁴³, measured by a Laser ablation inductively coupled to a plasma mass spectrometry (LA-ICPMS), were analysed. Juveniles and adults fish from three semi-enclosed systems (two bays and one coastal lagoon) and adults from nine adjacent coastal areas were examined. Three main behavioural patterns were identified: 1) Marine Migrant, with a unique and definitive movement from the estuarine area towards the adjacent platform when adult; 2) Estuarine Visitor, with movements from the estuarine area towards the adjacent platform when adult but also performing excursions back to the estuarine areas and back again to the adjacent platform; and 3) Nearshore Resident, with occurrence in the adjacent coastal areas that are influenced by estuarine systems. Estuarine areas with large sea connections (e.g., bays) favour more frequent fish entrances and exits compared with coastal lagoons that have a narrow sea connection. The high eurioic condition and capacity related to adapting to different environmental conditions were detected in this study for M. furnieri, a likely strategy to maintain variation in life histories and successfully adapt to coastal marine systems.

Spawning energetics and otolith microchemistry provide insights into the stock structure of bonga shad Ethmalosa fimbriata

The gross energy content of spawning batches and the microchemistry of sagittal otoliths in individual female bonga shad Ethmalosa fimbriata were compared between contrasting sampling sites at the Senegalese southern coast and inside the hypersaline Sine Saloum Estuary. Results show that females spawning in the estuary's middle reaches invested almost three times more energy into reproduction (115 ± 65 J g^-1 body mass) than their neritic counterparts (39 ± 34 J g^-1 body mass). Also, female otolith levels of Ba:Ca, Sr:Ca and Zn:Ca either differed significantly between study sites or could be linked to heterogeneous environmental variables. A quadratic discriminant function analysis provided evidence of segregated spawning populations of E. fimbriata in southern Senegalese waters.

Tutorial: Volumetric absorptive microsampling (VAMS)

Volumetric absorptive microsampling (VAMS) is a recent microsampling technique used to obtain dried specimens of blood and other biological matrices for application to a plethora of bioanalytical purposes. As such, it can be likened to dried blood spot (DBS) technique that has been in wide use for the last 40 years. However, VAMS promises to bring some significant advantages over DBS, related to sampling volume accuracy, haematocrit (HCT) dependence, pre-treatment and automation. Although some aspects still need to be investigated in depth, VAMS is increasingly recognised as a viable alternative to DBS and other dried microsampling techniques. In this tutorial, different aspects of VAMS approach are described and discussed, presenting the procedures adopted and the results obtained by those authors who have developed this kind of analytical workflow in the last few years. Hopefully, this will help other scientists to find new solutions to old and recent problems related to microsampling and to produce new, sound and interesting science in this field.

Linking otolith microchemistry and surface water contamination from natural gas mining

Unconventional natural gas drilling and the use of hydraulic fracturing technology have expanded rapidly in North America. This expansion has raised concerns of surface water contamination by way of spills and leaks, which may be sporadic, small, and therefore difficult to detect. Here we explore the use of otolith microchemistry as a tool for monitoring surface water contamination from generated waters (GW) of unconventional natural gas drilling. We exposed Brook Trout in the laboratory to three volumetric concentrations of surrogate generated water (SGW) representing GW on day five of drilling. Transects across otolith cross-sections were analyzed for a suite of elements by LA-ICP-MS. Brook Trout exposed to a 0.01-1.0% concentration of SGW for 2, 15, and 30 days showed a significant (p < 0.05) relationship of increasing Sr and Ba concentrations in all but one treatment. Analyses indicate lesser concentrations than used in this experiment could be detectable in surface waters and provide support for the use of this technique in natural habitats. To our knowledge, this is the first demonstration of how trace elements in fish otoliths may be used to monitor for surface water contamination from GW.

Otolith microchemistry: Insights into bioavailable pollutants in a man-made, urban inlet

Black bream (Acanthopagrus butcheri) were collected from an artificial inlet, Claisebrook Cove, Western Australia. Claisebrook Cove is adjacent to an historic contaminated site that was remediated during the 1990s. It was later identified as a priority area due to elevated levels of sediment contaminants including Zn, Cu, and Pb. Black bream were collected from this cove in 2005 and 2012 and their otoliths were analysed by laser ablation inductively coupled plasma mass spectrometry of the most recent growth zone. Levels of Zn and Mn, which are metabolically regulated, did not correlate with sediment contamination. However, reduction in sediment Cu levels over time coincided with reduced Cu otolith levels from 2005 to 2012. Results indicate that the elemental composition of the marginal edge of Black bream otoliths can identify bioavailable contaminants in an urban estuary and, with monitoring, can be utilized to establish long-term trends.

Linking otolith microchemistry and dendritic isoscapes to map heterogeneous production of fish across river basins

Production patterns of highly mobile species, such as anadromous fish, often exhibit high spatial and temporal heterogeneity across landscapes. Such variability is often asynchronous in time among habitats, which stabilizes production at aggregate scales of complexity. Reconstructing production patterns explicitly in space and time across multiple scales, however, remains difficult but is important for prioritizing habitat conservation. This is especially true for fishes inhabiting river basins due to long-range dispersal, high mortality at early life stages, complex population structure and elusive life history variation. We develop a new approach for mapping production patterns of Pacific salmon across a large river basin by integrating otolith microchemistry and dendritic isoscape models. The geographically continuous Bayesian assignment framework presented here yielded high accuracies (>90%) and relatively high precisions (precisions <4%; i.e., assignment areas of <530 river km of the 13 100 km total river length) when used to determine the natal source of known-origin juvenile Chinook salmon captured throughout the study region. Integrating these methods enabled us to base estimates of provenance and habitat use of individuals on a per location basis using strontium isotopic data throughout the continuous spatial domain of a river network. Such a framework provides substantial advantages over the more common nominal approach to employing otolith microchemistry to reconstruct movement patterns of fish. In doing so, we reconstructed the spatial production patterns of adult Chinook salmon returning to a large watershed in Bristol Bay, Alaska and illustrate the power of such an approach to conservation efforts.

Lake sturgeon Acipenser fulvescens and shovelnose sturgeon Scaphirhynchus platorynchus environmental life history revealed using pectoral fin-ray microchemistry: implications for interjurisdictional conservation through fishery closure zones

This study inferred that the majority of shovelnose sturgeon Scaphirhynchus platorynchus captured in the upper Mississippi River probably originated from locations outside the upper Mississippi River (Missouri River, middle Mississippi River); whereas, lake sturgeon Acipenser fulvescens exhibit infrequent movement outside of the upper Mississippi River, but may move throughout these interconnected large rivers at various life stages. By using pectoral fin-ray microchemistry (a non-lethal alternative to using otoliths), it is suggest that interjurisdictional cooperation will probably be needed to ensure sustainability of the S. platorynchus commercial fishery and the success of A. fulvescens reintroduction in the upper Mississippi River. Additionally, fin-ray microchemistry can provide invaluable data to make informed management decisions regarding large river fishes, that cross jurisdictional boundaries or that move outside of closure zones, without causing further mortality to compromised fish populations (e.g. threatened and endangered species).

Using otolith microchemistry and shape to assess the habitat value of oil structures for reef fish

Over 7500 oil and gas structures (e.g. oil platforms) are installed in offshore waters worldwide and many will require decommissioning within the next two decades. The decision to remove such structures or turn them into reefs (i.e. 'rigs-to-reefs') hinges on the habitat value they provide, yet this can rarely be determined because the residency of mobile species is difficult to establish. Here, we test a novel solution to this problem for reef fishes; the use of otolith (earstone) properties to identify oil structures of residence. We compare the otolith microchemistry and otolith shape of a site-attached coral reef fish (Pseudanthias rubrizonatus) among four oil structures (depth 82-135 m, separated by 9.7-84.2 km) on Australia's North West Shelf to determine if populations developed distinct otolith properties during their residency. Microchemical signatures obtained from the otolith edge using laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) differed among oil structures, driven by elements Sr, Ba and Mn, and to a lesser extent Mg and Fe. A combination of microchemical data from the otolith edge and elliptical Fourier (shape) descriptors allowed allocation of individuals to their 'home' structure with moderate accuracy (overall allocation accuracy: 63.3%, range: 45.5-78.1%), despite lower allocation accuracies for each otolith property in isolation (microchemistry: 47.5%, otolith shape: 45%). Site-specific microchemical signatures were also stable enough through time to distinguish populations during 3 separate time periods, suggesting that residence histories could be recreated by targeting previous growth zones in the otolith. Our results indicate that reef fish can develop unique otolith properties during their residency on oil structures which may be useful for assessing the habitat value of individual structures. The approach outlined here may also be useful for determining the residency of reef fish on artificial reefs, which would assist productivity assessments of these habitats.

Direct identification of tyrosine sulfation by using ultraviolet photodissociation mass spectrometry

Sulfation is a common post-translational modification of tyrosine residues in eukaryotes; however, detection using traditional liquid chromatography-mass spectrometry (LC-MS) methods is challenging based on poor ionization efficiency in the positive ion mode and facile neutral loss upon collisional activation. In the present study, 193 nm ultraviolet photodissociation (UVPD) is applied to sulfopeptide anions to generate diagnostic sequence ions, which do not undergo appreciable neutral loss of sulfate even using higher energy photoirradiation parameters. At the same time, neutral loss of SO₃ is observed from the precursor and charge-reduced precursor ions, a spectral feature that is useful for differentiating tyrosine sulfation from the nominally isobaric tyrosine phosphorylation. LC-MS detection limits for UVPD analysis in the negative mode were determined to be around 100 fmol for three sulfated peptides, caerulein, cionin, and leu-enkephalin. The LC-UVPD-MS method was applied for analysis of bovine fibrinogen, and its key sulfated peptide was confidently identified.

[Reconstructing habitat history of Larimichthys polyactis in Lüsi coastal waters of Jiangsu Province, China based on otolith microchemistry]

An electron probe microanalyzer (EPMA) was applied to analyze the element Sr and Ca microchemistry patterns in otoliths of Larimichthys polyactis in Lüsi coastal waters of Jiangsu Province, China. The results showed that Sr was heterogeneously distributed along the sagittal plane of the otoliths. The highest Sr concentration was normally found in the otolith cores while much lower concentrations were found in the remaining areas. The corresponding Sr/Ca ratios were (7.10 +/- 1.00) and (4.79 +/- 1.01) in the former and latter, respectively, which were significantly differed (P < 0.01), but low Sr/Ca ratios even as low as (3.51 +/- 0.76) were also observed in several fish. Based on the above results of otolith microchemistry, the habitat history of L. polyactis was reconstructed as that high salinity habitats seemed to be required at the stages of hatching and post-hatching development, while the reduced salinity habitats seemed to be preferable for the growth and development at the remaining stages of the life history. Furthermore, several fish in this study had likely even experienced much lower salinity habitats at the early stages.

Heterogeneous microchemistry between CdSO4 and CaCO3 particles under humidity and liquid water

Laboratory experiments using in situ Raman imaging combined with ex situ TOF-S-SIMS demonstrate the behavior of CdSO4·8/3H2O microparticles in contact with 101¯4 CaCO3 (calcite) surface under three different experimental conditions representative of unpolluted atmosphere. The contact of CdSO4·8/3H2O particles with CaCO3 surface in humid air (RH∼40-80%) does not induce any chemical reaction. In contrast, the condensation of a water drop on CdSO4·8/3H2O/CaCO3 interface causes the free dissolution of CdSO4·8/3H2O particle in the drop. A CdSO4·8/3H2O microcrystal is reformed after gentle drying with a CdSO4·H2O coating of the CaCO3 surface. The TOF-S-SIMS image of the CaCO3 surface provides evidence of a thin layer corresponding probably to insoluble coating of CdCO3 (otavite) or CdxCa1-xCO3 solid solution at the liquid-solid interface. This layer armours the CaCO3 from further dissolution and stops the reaction. The deposition of CdSO4·8/3H2O particle in water drop previously in contact with CaCO3 for a long time generates CdCO3 small rhombohedral crystals while gentle drying provokes the crystallization of bar shape crystals of CaSO4·2H2O (gypsum). These laboratory results provide valuable chemical prediction for a possible fate of cadmium rich particles emitted in the atmosphere and thus, can contribute to realistic assessment of human exposure to Cd hazard.

Long-term conversion of 45S5 bioactive glass-ceramic microspheres in aqueous phosphate solution

The conversion of 45S5 glass and glass-ceramics to a hydroxyapatite (HA)-like material in vitro has been studied extensively, but only for short reaction times (typically <3 months). In this paper, we report for the first time on the long-term conversion of 45S5 glass-ceramic microspheres (designated 45S5c) in an aqueous phosphate solution. Microspheres of 45S5c (75-150 μm) were immersed for 10 years at room temperature (~25 °C) in K(2)HPO(4) solution with a concentration of 0.01 M or 1.0 M, and with a starting pH of 7.0 or 9.5. The reacted 45S5c microspheres and solutions were analyzed using structural and analytical techniques. Only 25-45 vol% of the 45S5c microspheres were converted to an HA-like material after the 10 year reaction. In solutions with a starting pH of 9.5, an increase in the K(2)HPO(4) concentration from 0.01 to 1.0 M resulted in a doubling of the volume of the microspheres converted to an HA-like material but had little effect on the composition of the HA-like product. In comparison, reaction of the 45S5c microspheres in the solution with a starting pH of 7.0 resulted in an HA-like product in the 0.01 M K(2)HPO(4) solution but a calcium pyrophosphate product, Ca(10)K(4)(P(2)O(7))(6).9H(2)O, in the 1.0 M solution. The consequences of these results for the long-term use of 45S5 glass-ceramics in biomedical applications are discussed.

Synthesis and immunomodulatory activities of Helicobacter pylori lipophilic terminus of lipopolysaccharide including lipid A

Helicobacter pylori, a Gram-negative bacterium, causes gastroduodenal inflammatory diseases such as chronic gastritis and peptic ulcers, and is also a risk factor for gastric carcinogenesis. In this article, we review recent developments and findings in the chemical synthesis and immunomodulatory activities of H. pylori lipid A and 3-deoxy-D-manno-2-octulosonic acid (Kdo)-lipid A, to clarify the structural basis for the inflammatory response to H. pylori LPS. The synthetic methods include a new divergent synthetic approach with a widely applicable key intermediate for other types of lipid A structures, as well as a selective α-glycosylation reaction between Kdo and lipid A. Cytokine induction assays of the chemically synthesized lipid A structures showed selective cytokine induction depending on the patterns of acyl groups and phosphate groups. The results of cytokine induction assay suggested that H. pylori LPS can modulate the immune response during infection, and also plays a role in chronic inflammatory responses.

PEGylation potentiates the effectiveness of an antagonistic peptide that targets the EphB4 receptor with nanomolar affinity

The EphB4 receptor tyrosine kinase together with its preferred ligand, ephrin-B2, regulates a variety of physiological and pathological processes, including tumor progression, pathological forms of angiogenesis, cardiomyocyte differentiation and bone remodeling. We previously reported the identification of TNYL-RAW, a 15 amino acid-long peptide that binds to the ephrin-binding pocked of EphB4 with low nanomolar affinity and inhibits ephrin-B2 binding. Although ephrin-B2 interacts promiscuously with all the EphB receptors, the TNYL-RAW peptide is remarkably selective and only binds to EphB4. Therefore, this peptide is a useful tool for studying the biological functions of EphB4 and for imaging EphB4-expressing tumors. Furthermore, TNYL-RAW could be useful for treating pathologies involving EphB4-ephrin-B2 interaction. However, the peptide has a very short half-life in cell culture and in the mouse blood circulation due to proteolytic degradation and clearance by the kidneys and reticuloendothelial system. To overcome these limitations, we have modified TNYL-RAW by fusion with the Fc portion of human IgG1, complexation with streptavidin or covalent coupling to a 40 KDa branched polyethylene glycol (PEG) polymer. These modified forms of TNYL-RAW all have greatly increased stability in cell culture, while retaining high binding affinity for EphB4. Furthermore, PEGylation most effectively increases peptide half-life in vivo. Consistent with increased stability, submicromolar concentrations of PEGylated TNYL-RAW effectively impair EphB4 activation by ephrin-B2 in cultured B16 melanoma cells as well as capillary-like tube formation and capillary sprouting in co-cultures of endothelial and epicardial mesothelial cells. Therefore, PEGylated TNYL-RAW may be useful for inhibiting pathological forms of angiogenesis through a novel mechanism involving disruption of EphB4-ephrin-B2 interactions between endothelial cells and supporting perivascular mesenchymal cells. Furthermore, the PEGylated peptide is suitable for other cell culture and in vivo applications requiring prolonged EphB4 receptor targeting.

Temperature-dependent phase transitions in zeptoliter volumes of a complex biological membrane

Phase transitions in purple membrane have been a topic of debate for the past two decades. In this work we present studies of a reversible transition of purple membrane in the 50-60 °C range in zeptoliter volumes under different heating regimes (global heating and local heating). The temperature of the reversible phase transition is 52 ± 5 °C for both local and global heating, supporting the hypothesis that this transition is mainly due to a structural rearrangement of bR molecules and trimers. To achieve high resolution measurements of temperature-dependent phase transitions, a new scanning probe microscopy-based method was developed. We believe that our new technique can be extended to other biological systems and can contribute to the understanding of inhomogeneous phase transitions in complex systems.

Dynamics of the interfacial film in bicontinuous microemulsions based on a partly ionic surfactant mixture: A neutron spin-echo study

In a microemulsion system based on a mixture of nonionic and ionic surfactants the addition of alcohol instead of changing the temperature was used to tune the curvature of the surfactant interface. The influence of the addition of the short-chain alcohol 2-propanol in the system water-perchloroethylene- Marlowet IHF-2-propanol is studied using neutron spin-echo spectroscopy. In contrast to alcohols with long alkyl chains 2-propanol is no strong co-surfactant, but changes the properties of the solvents. The present contribution focuses on the bicontinuous phase in this system and a quantitative analysis of the obtained neutron spin-echo data is proposed within the theoretical framework given by Zilman and Granek for amphiphilic membranes. It turns out that, in addition to the local movements of the surfactant film, also a collective diffusional mode of the bicontinuous structure has to be taken into account. The presented approach allows to calculate the bending elastic constant κ of the film. The approach is subsequently applied to follow changes of κ as induced by changes of the alcohol concentration.

Environmental toxicity testing of contaminated soil based on microcalorimetry

Contaminated site assessment and monitoring requires efficient risk-management tools including innovative environmental toxicity tests. The first application of microcalorimetry for toxicity testing draw the attention to a possible new tool to increase sensitivity, to eliminate matrix effect and to study effect-mechanism. A Thermal Activity Monitor (TAM) microcalorimeter was used for measuring the heat production of various test organisms when getting in contact with sterile toxic soils. Well known bacterial (Azomonas agilis), animal (Folsomia candida) and plant test organisms (Sinapis alba) were tested for heat production. The heat response of selected testorganisms was measured in case of metal (Cu and Zn) and organic pollutant (Diesel oil, DBNPA and PCP) contaminated soils. In addition to the quantitative determination of the heat production, the mechanism of the toxic effect can be characterized from the shape of the power-time curve (slope of the curve, height and time of the maximum). In certain concentration ranges the higher the pollutant concentration of the soil the lower the maximum of the time-heat curve. At low pollutant concentrations an increased heat production was measured in case of A. agile and 20 and 200 mg Zn kg(-1) soil. The microcalorimetric testing was more sensitive in all cases than the traditional test methods. Our results showed that the microcalorimetric test method offers a new and sensitive option in environmental toxicology, both for research and routine testing.

Microphase separation in polymer solutions containing surfactants

A microphase separation in solutions containing a polymer and a mixture of two solvents, one of which consists of amphiphilic molecules (surfactant), is considered theoretically in the weak-segregation regime. A surfactant molecule is described as a dimer consisting of hydrophobic and polar parts. The energy gain due to the orientation of surfactant molecules can lead to the appearance of non-homogeneities in the solution, where density fluctuations cause the orientational ordering of surfactant molecules. The difference in the interaction energies of hydrophobic and polar groups of a surfactant with solvent is considered as a main reason for orienting surfactant molecules. The free energy is calculated for various morphologies (lamellar, cylindrical hexagonal, spherical particles arranged at different cubic lattices). The phase diagrams are presented. With worsening the solvent quality, the transitions from disordered to a macro-separated state at low polymer and surfactant concentrations or to a body-centered-cubic, then hexagonal, and then lamellar structure at high polymer and surfactant concentrations are predicted. The amphiphilicity degree of surfactant molecules should exceed a certain critical value to make a microstructure formation possible. The period of the lamellar microstructure decreases with increasing the surfactant and polymer concentrations.

Measuring aptamer equilibria using gradient micro free flow electrophoresis

Gradient micro free flow electrophoresis (muFFE) was used to observe the equilibria of DNA aptamers with their targets (IgE or HIVRT) across a range of ligand concentrations. A continuous stream of aptamer was mixed online with an increasing concentration of target and introduced into the muFFE device, which separated ligand-aptamer complexes from the unbound aptamer. The continuous nature of muFFE allowed the equilibrium distribution of aptamer and complex to be measured at 300 discrete target concentrations within 5 min. This is a significant improvement in speed and precision over affinity capillary electrophoresis (ACE) assays. The dissociation constant of the aptamer-IgE complex was estimated to be 48 +/- 3 nM. The high coverage across the range of ligand concentrations allowed complex stoichiometries of the aptamer-HIVRT complexes to be observed. Nearly continuous observation of the equilibrium distribution from 0 to 500 nM HIVRT revealed the presence of complexes with 3:1 (aptamer/HIVRT), 2:1, and 1:1 stoichiometries.

Microscale wear behavior and crosslinking of PEG-like coatings for total hip replacements

The predominant cause of late-state failure of total hip replacements is wear-mediated osteolysis caused by wear particles that originate from the ultrahigh molecular weight polyethylene (UHMWPE) acetabular cup surface. One strategy for reducing wear particle formation from UHMWPE is to modify the surface with a hydrophilic coating to increase lubrication from synovial fluid. This study focuses on the wear behavior of hydrophilic coatings similar to poly(ethylene glycol) (PEG). The coatings were produced by plasma-polymerizing tetraglyme on UHMWPE in a chamber heated to 40 degrees C or 50 degrees C. Both temperatures yielded coatings with PEG-like chemistry and increased hydrophilicity relative to uncoated UHMWPE; however, the 40 degrees C coatings were significantly more resistant to damage induced by atomic force microscopy nanoscratching. The 40 degrees C coatings exhibited only one damage mode (delamination) and often showed no signs of damage after repeated scratching. In contrast, the 50 degrees C coatings exhibited three damage modes (roughening, thinning, and delamination), and always showed visible signs of damage after no more than two scratches. The greater wear resistance of the 40 degrees C coatings could not be explained by coating chemistry or hydrophilicity, but it corresponded to an approximately 26-32% greater degree of crosslinking relative to the 50 degrees C surfaces, suggesting that crosslinking should be a significant design consideration for hydrophilic coatings used for total hip replacements and other wear-dependent applications.

Tissue trace and major element levels in organophosphate insecticide fenthion (Lebaycid) toxicity in rats: prophylactic and therapeutic effect of exogenous melatonin

Organophosphate compounds are very toxic chemicals and used in widespread applications. The present study was designed to examine the role of exogenous melatonin against organophosphate toxicity in tissues (brain, heart, jejunum, kidney, liver, lung, muscle and pancreas) trace and major element levels of rats. Trace and major element concentrations in the tissues were measured in the sham group, the control group, prophylaxis with the melatonin group and therapy with the melatonin group (TM) by inductively coupled plasma-optical emission spectroscopy. Statistically significant differences among the experimental groups were detected for some tissue trace and major element concentrations. In the brain tissue, the Al, Mn and Se concentrations in the sham group were significantly higher than those in the control group (p<0.05). In the heart tissue, the Cu, Mn and Se concentrations in the sham group were significantly increased than those in the control group (p<0.05). In the kidney tissue, trace and major element concentrations in the TM group were significantly lower than those in the sham group (Fe and Mn; p<0.05, Cu, Mo, Ni, Ti, V and Zn; p<0.01). In the liver, Mg, Al, Zn and Ca concentrations in the TM group were significantly higher than those in the fenthion-treated control group (p<0.01). In the muscle tissue, element concentrations in the TM group were significantly lower when compared with the sham groups (Ca and Si; p<0.01). The Al, Cr, Mo, Ni, Si and Zn element concentrations were markedly decreased in the control group as compared with the TM group in the pancreas tissue (p<0.01). In conclusion, according to the results of the present study the major findings are that the fenthion-treated rat's tissue element levels were effected and the melatonin may normalize the altered levels of some trace and major elements of the tissues in organophosphate toxicity.

Microbiological characterisation of southern African medicinal and cosmetic clays

The effects of traditionally used medicinal and cosmetic clays in southern Africa on selected microorganisms were studied using microbiological media. The clay pH, microchemical composition, kind of associated microorganisms and antimicrobial activity of clays against test microorganisms were determined. The clays contained varying numbers of microorganisms which ranged from 0 up to 105 CFU/g. Clay pH ranged from 2.3-8.9. Neither Escherichia coli, nor other faecal coliforms were detected. Clays of pH value of <4 displayed antimicrobial activities. Clays which were active against test microorganisms had Na(2)O, Al(2)O(3), SiO(2), SO(3), CuO or Cl(2)O as major components. Microbial activity of clays was attributed mainly to low pH but cations such as Cu, Al, S or Cl and various anions might have contributed to the microbicidal effects. No antimicrobial activity was established for many of the clays commonly used in the treatment of common ailments of microbial origin.

An optical apparatus for rotation and trapping

We present details of the design, construction, and testing of a single-beam optical tweezers apparatus capable of measuring and exerting torque, as well as force, on microfabricated, optically anisotropic particles (an "optical torque wrench"). The control of angular orientation is achieved by rotating the linear polarization of a trapping laser with an electro-optic modulator (EOM), which affords improved performance over previous designs. The torque imparted to the trapped particle is assessed by measuring the difference between left- and right-circular components of the transmitted light, and constant torque is maintained by feeding this difference signal back into a custom-designed electronic servo loop. The limited angular range of the EOM (+/-180 degrees ) is extended by rapidly reversing the polarization once a threshold angle is reached, enabling the torque clamp to function over unlimited, continuous rotations at high bandwidth. In addition, we developed particles suitable for rotation in this apparatus using microfabrication techniques. Altogether, the system allows for the simultaneous application of forces (approximately 0.1-100 pN) and torques (approximately 1-10,000 pN nm) in the study of biomolecules. As a proof of principle, we demonstrate how our instrument can be used to study the supercoiling of single DNA molecules.

Microrheology and dynamics of an associative polymer

We study the microscopic viscoelastic properties and relaxation dynamics of solutions of a side-chain associative polymer, hydrophobically modified hydroxyethyl cellulose (hmHEC). Dynamic light scattering from small tracer particles suspended in the polymer solutions is used to determine their viscous and elastic moduli on the scale of the particles. Bulk-scale viscoelastic properties are measured by shear rheometry. The motion of the tracer particles in hmHEC is diffusive at short times and subdiffusive at intermediate and long times. The long-time subdiffusive motion was not observed in parallel experiments on unmodified HEC solutions, and is explained in terms of hindered reptation of the hydrophobically modified polymer chains in the associative network. Dynamic light scattering from the polymer molecules themselves shows that chain relaxation in hmHEC is dominated by slow concentration-dependent processes due to the large-scale associative network structure, while that in HEC is dominated by fast concentration independent Rouse-like dynamics.

Spatial structure of trace elements in extensive biomonitoring surveys with terrestrial mosses

The size of the area affected by contamination processes mainly depends on the type of contaminant and the way it is emitted. In regular sampling, the size of the sampling grid will therefore interact with the scale at which the contamination processes are produced, for each contaminant, so that the grid will only enable characterization of those processes that occur at scales larger than the grid, i.e. large scale processes. The present study analysed the data corresponding to tissue concentrations of Cd, Cu, Fe, Hg, Mn, Pb, Se, V and Zn in the terrestrial moss Pseudoscleropodium purum obtained in regular sampling surveys with grids of different sizes (15x15, 7.5x7.5 km) plus a series of accessory points located at 1 km from the 15x15 km sampling grid; all sampling sites were located in Galicia and were sampled in March 2004. The objective of the study was to characterize the interaction between the scale of the sampling grid and the scale at which the contamination processes are produced, for each contaminant, to enable adjustment of the size of the grids to the scale at which the contamination processes are mainly produced. For this purpose, the spatial structure of the concentration of each element was analysed by use of semivariograms created with a robust estimator of the semivariance. The results of the study verified the existence of a real interaction between the scale of the sampling grid and the scale of the contamination processes. The results also demonstrated how in the study area, the contamination processes associated with Cd, Pb and V are generally small scale processes, whereas those associated with Cu, Hg and Se are generally large scale processes.

Standard operating procedure for metabonomics studies of blood serum and plasma samples using a 1H-NMR micro-flow probe

A standard operating procedure (SOP) is presented for high-throughput metabonomics studies using a 600 MHz NMR spectrometer equipped with a micro-flow probe that is connected to an auto-sampler. The procedure is designed to minimize random and systematic variation of NMR data collection. In addition, a protocol is described to assess the quality of the data acquired by a given NMR spectroscopist to ensure that (i) all researchers involved in the NMR data acquisition of a metabonomics research program perform equally and (ii) operator-associated variation of NMR data collection is statistically not relevant for the interpretation of results obtained from multivariate data analyses.

Flow injection analysis-isotope ratio mass spectrometry for bulk carbon stable isotope analysis of alcoholic beverages

A new method for bulk carbon isotope ratio determination of water-soluble samples is presented that is based on flow injection analysis-isotope ratio mass spectrometry (FIA-IRMS) using an LC IsoLink interface. Advantages of the method are that (i) only very small amounts of sample are required (2-5 microL of the sample for up to 200 possible injections), (ii) it avoids complex sample preparation procedures such as needed for EA-IRMS analysis (only sample dilution and injection,) and (iii) high throughput due to short analysis times is possible (approximately 15 min for five replicates). The method was first tested and evaluated as a fast screening method with industrially produced ethanol samples, and additionally the applicability was tested by the measurement of 81 alcoholic beverages, for example, whiskey, brandy, vodka, tequila, and others. The minimal sample concentration required for precise and reproducible measurements was around 50 microL L(-1) ethanol/water (1.71 mM carbon). The limit of repeatability was determined to be r=0.49%. FIA-IRMS represents a fast screening method for beverage authenticity control. Due to this, samples can be prescreened as a decisive criterion for more detailed investigations by HPLC-IRMS or multielement GC-IRMS measurements for a verification of adulteration.

Molecularly imprinted polymer for analysis of trace atrazine herbicide in water

A molecularly imprinted polymer (MIP) for atrazine was synthesized by non-covalent method. The binding capacity of MIP was 1.00 mg g(-1) polymer. The selectivity and recovery were investigated with various pesticides which are mostly, found in the environment, for both similar and different chemical structure of atrazine. The competitive recognition between atrazine and structurally similar compounds was evaluated and it was found that the system provided highest recovery and selectivity for atrazine while low recovery and selectivity were obtained for the other compounds. The highest recovery was obtained from MIP compared with non-imprinted polymer (NIP), a commercial C(18) and a granular activated carbon (GAC) sorbent. The method provided high recoveries ranged from 94 to 99% at two spiked levels with relative standard deviations less than 2%. The lower detection limit of the method was 80 ng L(-1). This method was successfully applied for analysis of environmental water samples.