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Briceño-Loaiza C, Fernández-Sanhueza B, Benavides-Silva C, Jimenez JY, Rubio AV, Ábalos P, Alegría-Morán RA. Spatial clusters, temporal behavior, and risk factors analysis of rabies in livestock in Ecuador. Prev Vet Med 2024; 226:106188. [PMID: 38513566 DOI: 10.1016/j.prevetmed.2024.106188] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Revised: 02/12/2024] [Accepted: 03/15/2024] [Indexed: 03/23/2024]
Abstract
Rabies, a globally distributed and highly lethal zoonotic neglected tropical disease, has a significant impact in South America. In Ecuador, animal rabies cases are primarily linked to livestock, and hematophagous bats play a crucial role in disease transmission. This study aims to identify temporal trends, spatial patterns, and risk factors for animal rabies in Ecuador between 2014 and 2019. Epidemiological survey reports from the official Animal Rabies Surveillance Program of the Phyto and Zoosanitary Regulation and Control Agency of Ecuador (AGROCALIDAD) were used. The Animal Rabies Surveillance Program from AGROCALIDAD consists of an official passive surveillance program that receives reports from farmers or individuals (both trained or untrained) who have observed animals with neurological clinical signs and lesions compatible with bat bites, or who have seen or captured bats on their farms or houses. Once this report is made, AGROCALIDAD personnel is sent for field inspection, having to confirm the suspicion of rabies based on farm conditions and compatibility of signs. AGROCALIDAD personnel collect samples from all suspicious animals, which are further processed and analyzed using the Direct Fluorescent Antibody (DFA) test for rabies confirmatory diagnosis. In this case, study data comprised 846 bovine farms (with intra-farm sample sizes ranging from 1 to 16 samples) located in different ecoregions of Ecuador; out of these, 397 (46.93%) farms tested positive for animal rabies, revealing six statistically significant spatial clusters. Among these clusters, three high-risk areas were identified in the southeast of Ecuador. Seasonality was confirmed by the Ljung-Box test for both the number of cases (p < 0.001) and the positivity rate (p < 0.001). The Pacific Coastal lowlands and Sierra regions showed a lower risk of positivity compared to Amazonia (OR = 0.529; 95% CI = 0.318 - 0.883; p = 0.015 and OR = 0.633; 95% CI = 0.410 - 0.977; p = 0.039, respectively). The breeding of non-bovine animal species demonstrated a lower risk of positivity to animal rabies when compared to bovine (OR = 0.145; 95% CI = 0.062 - 0.339; p < 0.001). Similarly, older animals exhibited a lower risk (OR = 0.974; 95% CI = 0.967 - 0.981; p < 0.001). Rainfall during the rainy season was also found to decrease the risk of positivity to animal rabies (OR = 0.996; 95% CI = 0.995 - 0.998; p < 0.001). This study underscores the significance of strengthening the national surveillance program for the prevention and control of animal rabies in Ecuador and other countries facing similar epidemiological, social, and geographical circumstances.
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Affiliation(s)
- César Briceño-Loaiza
- Facultad de Ciencias Veterinarias y Pecuarias, Universidad de Chile, Santiago, Chile; Agencia de Regulación y Control Fito y Zoosanitario (AGROCALIDAD), Ecuador; Carrera de Agroecología, Instituto Superior Tecnológico Juan Montalvo, Loja, Ecuador
| | - Bastián Fernández-Sanhueza
- Facultad de Ciencias Veterinarias y Pecuarias, Universidad de Chile, Santiago, Chile; Escuela de Medicina Veterinaria, Facultad de Recursos Naturales y Medicina Veterinaria, Universidad Santo Tomás, Santiago, Chile
| | - César Benavides-Silva
- Facultad de Historia, Geografía y Ciencia Política, Instituto de Geografía, Pontificia Universidad Católica, Chile; Centro de Investigaciones Territoriales, Universidad Nacional de Loja, Ecuador
| | - José Yaguana Jimenez
- Carrera de Medicina Veterinaria, Facultad Agropecuaria y de Recursos Naturales Renovables, Universidad Nacional de Loja, Ecuador
| | - André V Rubio
- Facultad de Ciencias Veterinarias y Pecuarias, Universidad de Chile, Santiago, Chile
| | - Pedro Ábalos
- Facultad de Ciencias Veterinarias y Pecuarias, Universidad de Chile, Santiago, Chile
| | - Raúl A Alegría-Morán
- Escuela de Medicina Veterinaria, Facultad de Recursos Naturales y Medicina Veterinaria, Universidad Santo Tomás, Santiago, Chile.
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2
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Pieracci EG, Wallace R, Maskery B, Brouillette C, Brown C, Joo H. Dogs on the move: Estimating the risk of rabies in imported dogs in the United States, 2015-2022. Zoonoses Public Health 2024. [PMID: 38449353 DOI: 10.1111/zph.13122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2023] [Revised: 02/05/2024] [Accepted: 02/27/2024] [Indexed: 03/08/2024]
Abstract
BACKGROUND Dog-mediated rabies virus variant (DMRVV), a zoonotic pathogen that causes a deadly disease in animals and humans, is present in more than 100 countries worldwide but has been eliminated from the United States since 2007. In the United States, the U.S. Centers for Disease Control and Prevention has recorded four instances of rabies in dogs imported from DMRVV-enzootic countries since 2015. However, it remains uncertain whether the incidence of DMRVV among imported dogs from these countries significantly surpasses that of domestically acquired variants among domestic U.S. dogs. AIM This evaluation aimed to estimate the number of dogs imported from DMRVV-enzootic countries and compare the risk of rabies between imported dogs and the U.S. domestic dog population. MATERIALS AND METHODS Data from the CDC's dog import permit system (implemented during 2021 under a temporary suspension of dog importation from DMRVV-enzootic countries) and U.S. Customs and Border Protection's Automated Commercial Environment system, each of which records a segment of dogs entering the U.S. from DMRVV-enzootic countries, was analysed. Additionally, we estimated the incidence rate of rabies in dogs imported from DMRVV-enzootic countries and compared it to the incidence rate within the general U.S. dog population, due to domestically acquired rabies variants, over the eight-year period (2015-2022). RESULTS An estimated 72,589 (range, 62,660-86,258) dogs were imported into the United States annually between 2015 and 2022 from DMRVV-enzootic countries. The estimated incidence rate of rabies was 16 times higher (range, 13.2-19.4) in dogs imported from DMRVV-enzootic countries than that estimated for domestically acquired rabies in the general U.S. dog population. CONCLUSIONS Preventing human exposure to dogs with DMRVV is a public health priority. The higher risk of rabies in dogs imported from DMRVV-enzootic countries supports the need for importation requirements aimed at preventing the reintroduction of DMRVV into the United States.
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Affiliation(s)
- Emily G Pieracci
- Division of Global Migration Health, Centers for Disease Control and Prevention, Atlanta, Georgia, USA
| | - Ryan Wallace
- Division of High Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, Georgia, USA
| | - Brian Maskery
- Division of Global Migration Health, Centers for Disease Control and Prevention, Atlanta, Georgia, USA
| | - Colleen Brouillette
- Division of Global Migration Health, Centers for Disease Control and Prevention, Atlanta, Georgia, USA
| | - Clive Brown
- Division of Global Migration Health, Centers for Disease Control and Prevention, Atlanta, Georgia, USA
| | - Heesoo Joo
- Division of Global Migration Health, Centers for Disease Control and Prevention, Atlanta, Georgia, USA
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3
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Gamble A, Olarte-Castillo XA, Whittaker GR. Backyard zoonoses: The roles of companion animals and peri-domestic wildlife. Sci Transl Med 2023; 15:eadj0037. [PMID: 37851821 DOI: 10.1126/scitranslmed.adj0037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Accepted: 09/28/2023] [Indexed: 10/20/2023]
Abstract
The spillover of human infectious diseases from animal reservoirs is now well appreciated. However, societal and climate-related changes are affecting the dynamics of such interfaces. In addition to the disruption of traditional wildlife habitats, in part because of climate change and human demographics and behavior, there is an increasing zoonotic disease risk from companion animals. This includes such factors as the awareness of animals kept as domestic pets and increasing populations of free-ranging animals in peri-domestic environments. This review presents background and commentary focusing on companion and peri-domestic animals as disease risk for humans, taking into account the human-animal interface and population dynamics between the animals themselves.
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Affiliation(s)
- Amandine Gamble
- School of Biodiversity, One Health & Veterinary Medicine, University of Glasgow, Glasgow, UK
- Department of Public and Ecosystem Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA
| | - Ximena A Olarte-Castillo
- Department of Microbiology and Immunology, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA
| | - Gary R Whittaker
- Department of Public and Ecosystem Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA
- Department of Microbiology and Immunology, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA
- Atkinson Center for Sustainability, Cornell University, Ithaca, NY, USA
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4
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Dundarova H, Ivanova-Aleksandrova N, Bednarikova S, Georgieva I, Kirov K, Miteva K, Neov B, Ostoich P, Pikula J, Zukal J, Hristov P. Phylogeographic Aspects of Bat Lyssaviruses in Europe: A Review. Pathogens 2023; 12:1089. [PMID: 37764897 PMCID: PMC10534866 DOI: 10.3390/pathogens12091089] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 08/08/2023] [Accepted: 08/22/2023] [Indexed: 09/29/2023] Open
Abstract
During the last few decades, bat lyssaviruses have become the topic of intensive molecular and epidemiological investigations. Since ancient times, rhabdoviruses have caused fatal encephalitis in humans which has led to research into effective strategies for their eradication. Modelling of potential future cross-species virus transmissions forms a substantial component of the recent infection biology of rabies. In this article, we summarise the available data on the phylogeography of both bats and lyssaviruses in Europe and the adjacent reg ions, especially in the contact zone between the Palearctic and Ethiopian realms. Within these zones, three bat families are present with high potential for cross-species transmission and the spread of lyssaviruses in Phylogroup II to Europe (part of the western Palearctic). The lack of effective therapies for rabies viruses in Phylogroup II and the most divergent lyssaviruses generates impetus for additional phylogenetic and virological research within this geographical region.
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Affiliation(s)
- Heliana Dundarova
- Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, 1 Tsar Osvoboditel Blvd., 1000 Sofia, Bulgaria
| | | | - Sarka Bednarikova
- Department of Ecology and Diseases of Zoo Animals, Game, Fish and Bees, University of Veterinary Sciences Brno, Palackého tř. 1946/1, 612 42 Brno, Czech Republic
| | - Irina Georgieva
- National Centre of Infectious and Parasitic Diseases, 26 Yanko Sakazov Blvd., 1504 Sofia, Bulgaria
| | - Krasimir Kirov
- Faculty of Biology, University of Plovdiv “Paisii Hilendarski”, 24 Tzar Assen Str., 4000 Plovdiv, Bulgaria
| | - Kalina Miteva
- Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, 1 Tsar Osvoboditel Blvd., 1000 Sofia, Bulgaria
| | - Boyko Neov
- Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, 1 Tsar Osvoboditel Blvd., 1000 Sofia, Bulgaria
| | - Peter Ostoich
- Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, 1 Tsar Osvoboditel Blvd., 1000 Sofia, Bulgaria
| | - Jiri Pikula
- Department of Ecology and Diseases of Zoo Animals, Game, Fish and Bees, University of Veterinary Sciences Brno, Palackého tř. 1946/1, 612 42 Brno, Czech Republic
| | - Jan Zukal
- Institute of Vertebrate Biology, Czech Academy of Sciences, Květná 8, 603 65 Brno, Czech Republic
| | - Peter Hristov
- Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, 1 Tsar Osvoboditel Blvd., 1000 Sofia, Bulgaria
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5
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Holtz A, Baele G, Bourhy H, Zhukova A. Integrating full and partial genome sequences to decipher the global spread of canine rabies virus. Nat Commun 2023; 14:4247. [PMID: 37460566 DOI: 10.1038/s41467-023-39847-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Accepted: 06/30/2023] [Indexed: 07/20/2023] Open
Abstract
Despite the rapid growth in viral genome sequencing, statistical methods face challenges in handling historical viral endemic diseases with large amounts of underutilized partial sequence data. We propose a phylogenetic pipeline that harnesses both full and partial viral genome sequences to investigate historical pathogen spread between countries. Its application to rabies virus (RABV) yields precise dating and confident estimates of its geographic dispersal. By using full genomes and partial sequences, we reduce both geographic and genetic biases that often hinder studies that focus on specific genes. Our pipeline reveals an emergence of the present canine-mediated RABV between years 1301 and 1403 and reveals regional introductions over a 700-year period. This geographic reconstruction enables us to locate episodes of human-mediated introductions of RABV and examine the role that European colonization played in its spread. Our approach enables phylogeographic analysis of large and genetically diverse data sets for many viral pathogens.
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Affiliation(s)
- Andrew Holtz
- Institut Pasteur, Université Paris Cité, Lyssavirus Epidemiology and Neuropathology Unit, F-75015, Paris, France.
| | - Guy Baele
- Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium
| | - Hervé Bourhy
- Institut Pasteur, Université Paris Cité, Lyssavirus Epidemiology and Neuropathology Unit, F-75015, Paris, France
- World Health Organization Collaborating Center for Reference and Research on Rabies, Institut Pasteur, Paris, France
| | - Anna Zhukova
- Institut Pasteur, Université Paris Cité, Bioinformatics and Biostatistics Hub, F-75015, Paris, France.
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Drzewnioková P, Marciano S, Leopardi S, Panzarin V, De Benedictis P. Comparison of Pan-Lyssavirus RT-PCRs and Development of an Improved Protocol for Surveillance of Non-RABV Lyssaviruses. Viruses 2023; 15:v15030680. [PMID: 36992389 PMCID: PMC10052027 DOI: 10.3390/v15030680] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2023] [Revised: 02/28/2023] [Accepted: 03/02/2023] [Indexed: 03/08/2023] Open
Abstract
Rabies is a zoonotic and fatal encephalitis caused by members of the Lyssavirus genus. Among them, the most relevant species is Lyssavirus rabies, which is estimated to cause 60,000 human and most mammal rabies deaths annually worldwide. Nevertheless, all lyssaviruses can invariably cause rabies, and therefore their impact on animal and public health should not be neglected. For accurate and reliable surveillance, diagnosis should rely on broad-spectrum tests able to detect all known lyssaviruses, including the most divergent ones. In the present study, we evaluated four different pan-lyssavirus protocols widely used at an international level, including two real-time RT-PCR assays (namely LN34 and JW12/N165-146), a hemi-nested RT-PCR and a one-step RT-PCR. Additionally, an improved version of the LN34 assay ((n) LN34) was developed to increase primer–template complementarity with respect to all lyssavirus species. All protocols were evaluated in silico, and their performance was compared in vitro employing 18 lyssavirus RNAs (encompassing 15 species). The (n) LN34 assay showed enhanced sensitivity in detecting most lyssavirus species, with limits of detection ranging from 10 to 100 RNA copies/µL depending on the strain, while retaining high sensitivity against Lyssavirus rabies. The development of this protocol represents a step forward towards improved surveillance of the entire Lyssavirus genus.
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Affiliation(s)
- Petra Drzewnioková
- FAO Reference Center for Rabies, Istituto Zooprofilattico Sperimentale delle Venezie, 35020 Legnaro, PD, Italy
- Correspondence: (P.D.); (P.D.B.)
| | - Sabrina Marciano
- Innovative Virology Laboratory, Research and Innovation Department, Istituto Zooprofilattico Sperimentale delle Venezie, 35020 Legnaro, PD, Italy
| | - Stefania Leopardi
- FAO Reference Center for Rabies, Istituto Zooprofilattico Sperimentale delle Venezie, 35020 Legnaro, PD, Italy
| | - Valentina Panzarin
- Innovative Virology Laboratory, Research and Innovation Department, Istituto Zooprofilattico Sperimentale delle Venezie, 35020 Legnaro, PD, Italy
| | - Paola De Benedictis
- FAO Reference Center for Rabies, Istituto Zooprofilattico Sperimentale delle Venezie, 35020 Legnaro, PD, Italy
- Correspondence: (P.D.); (P.D.B.)
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7
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Escobar LE, Velasco-Villa A, Satheshkumar PS, Nakazawa Y, Van de Vuurst P. Revealing the complexity of vampire bat rabies "spillover transmission". Infect Dis Poverty 2023; 12:10. [PMID: 36782311 PMCID: PMC9924873 DOI: 10.1186/s40249-023-01062-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Accepted: 01/30/2023] [Indexed: 02/15/2023] Open
Abstract
BACKGROUND The term virus 'spillover' embodies a highly complex phenomenon and is often used to refer to viral transmission from a primary reservoir host to a new, naïve yet susceptible and permissive host species. Spillover transmission can result in a virus becoming pathogenic, causing disease and death to the new host if successful infection and transmission takes place. MAIN TEXT The scientific literature across diverse disciplines has used the terms virus spillover, spillover transmission, cross-species transmission, and host shift almost indistinctly to imply the complex process of establishment of a virus from an original host (source/donor) to a naïve host (recipient), which have close or distant taxonomic or evolutionary ties. Spillover transmission may result in unsuccessful onward transmission, if the virus dies off before propagation. Alternatively, successful viral establishment in the new host can occur if subsequent secondary transmission among individuals of the same novel species and among other sympatric susceptible species occurred. As such, virus spillover transmission is a common yet highly complex phenomenon that encompasses multiple subtle stages that can be deconstructed to be studied separately to better understand the drivers of disease emergence. Rabies virus (RABV) is a well-documented viral pathogen which still inflicts heavy impact on humans, companion animals, wildlife, and livestock throughout Latin America due substantial spatial temporal and ecological-natural and expansional-overlap with several virus reservoir hosts. Thereby, the rabies disease system represents a robust avenue through which the drivers and uncertainties surrounding spillover transmission can be unravel at its different subtle stages to better understand how they may be affected by coarse, medium, and fine scale variables. CONCLUSIONS The continued study of viral spillover transmission necessitates the elucidation of its complexities to better assess the cross-scale impacts of ecological forces linked to the propensity of spillover success. Improving capacities to reconstruct and predict spillover transmission would prevent public health impacts on those most at risk populations across the globe.
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Affiliation(s)
- Luis E. Escobar
- grid.438526.e0000 0001 0694 4940Department of Fish and Wildlife Conservation, Virginia Tech, Blacksburg, VA USA ,grid.438526.e0000 0001 0694 4940Virginia Tech Graduate School, Translational Biology, Medicine, and Health Program, Blacksburg, VA USA ,grid.438526.e0000 0001 0694 4940Global Change Center, Virginia Tech, Blacksburg, VA USA ,grid.438526.e0000 0001 0694 4940Center for Emerging Zoonotic and Arthropod-Borne Pathogens, Virginia Tech, Blacksburg, VA USA ,grid.442163.60000 0004 0486 6813Facultad de Ciencias Agropecuarias, Universidad de La Salle, Bogotá, Colombia
| | - Andres Velasco-Villa
- grid.416738.f0000 0001 2163 0069Poxvirus and Rabies Branch, Centers for Disease Control and Prevention, 1600 Clifton Rd. NE, Atlanta, GA 30333 USA
| | - Panayampalli S. Satheshkumar
- grid.416738.f0000 0001 2163 0069Poxvirus and Rabies Branch, Centers for Disease Control and Prevention, 1600 Clifton Rd. NE, Atlanta, GA 30333 USA
| | - Yoshinori Nakazawa
- grid.416738.f0000 0001 2163 0069Poxvirus and Rabies Branch, Centers for Disease Control and Prevention, 1600 Clifton Rd. NE, Atlanta, GA 30333 USA
| | - Paige Van de Vuurst
- grid.438526.e0000 0001 0694 4940Department of Fish and Wildlife Conservation, Virginia Tech, Blacksburg, VA USA ,grid.438526.e0000 0001 0694 4940Virginia Tech Graduate School, Translational Biology, Medicine, and Health Program, Blacksburg, VA USA ,grid.438526.e0000 0001 0694 4940Center for Emerging Zoonotic and Arthropod-Borne Pathogens, Virginia Tech, Blacksburg, VA USA
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8
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Velasco-Villa A. On skunk rabies and its prevention in North America. EQUINE VET EDUC 2023; 35:589-593. [PMID: 38651084 PMCID: PMC11034821 DOI: 10.1111/eve.13843] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Accepted: 05/26/2023] [Indexed: 04/25/2024]
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9
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Jacquot M, Wallace MA, Streicker DG, Biek R. Geographic Range Overlap Rather than Phylogenetic Distance Explains Rabies Virus Transmission among Closely Related Bat Species. Viruses 2022; 14:v14112399. [PMID: 36366496 PMCID: PMC9697534 DOI: 10.3390/v14112399] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2022] [Revised: 10/27/2022] [Accepted: 10/27/2022] [Indexed: 01/31/2023] Open
Abstract
The cross-species transmission (CST) of pathogens can have dramatic consequences, as highlighted by recent disease emergence events affecting human, animal and plant health. Understanding the ecological and evolutionary factors that increase the likelihood of disease agents infecting and establishing in a novel host is therefore an important research area. Previous work across different pathogens, including rabies virus (RABV), found that increased evolutionary distance between hosts reduces the frequency of cross-species transmission and of permanent host shifts. However, whether this effect of host relatedness still holds for transmission among recently diverged hosts is not well understood. We aimed to ask if high host relatedness can still increase the probability of a host shift between more recently diverged hosts, and the importance of this effect relative to ecological predictors. We first addressed this question by quantifying the CST frequency of RABV between North American bat species within the genus Myotis, using a multi-decade data set containing 128 nucleoprotein (N) RABV sequences from ten host species. We compared RABV CST frequency within Myotis to the rates of CST between nine genera of North American bat species. We then examined whether host relatedness or host range overlap better explains the frequency of CST seen between Myotis species. We found that at the within genus scale, host range overlap, rather than host relatedness best explains the frequency of CST events. Moreover, we found evidence of CST occurring among a higher proportion of species, and CST more frequently resulting in sustained transmission in the novel host in the Myotis dataset compared to the multi-genus dataset. Our results suggest that among recently diverged species, the ability to infect a novel host is no longer restricted by physiological barriers but instead is limited by physical contact. Our results improve predictions of where future CST events for RABV might occur and clarify the relationship between host divergence and pathogen emergence.
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Affiliation(s)
- Maude Jacquot
- School of Biodiversity, One Health and Veterinary Medicine, Boyd Orr Centre for Population and Ecosystem Health, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK
- Correspondence: (M.J.); (R.B.)
| | - Megan A. Wallace
- School of Biodiversity, One Health and Veterinary Medicine, Boyd Orr Centre for Population and Ecosystem Health, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK
| | - Daniel G. Streicker
- School of Biodiversity, One Health and Veterinary Medicine, Boyd Orr Centre for Population and Ecosystem Health, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK
- Centre for Virus Research, MRC-University of Glasgow, Glasgow G61 1QH, UK
| | - Roman Biek
- School of Biodiversity, One Health and Veterinary Medicine, Boyd Orr Centre for Population and Ecosystem Health, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK
- Correspondence: (M.J.); (R.B.)
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10
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Opportunities and Limitations of Molecular Methods for Studying Bat-Associated Pathogens. Microorganisms 2022; 10:microorganisms10091875. [PMID: 36144476 PMCID: PMC9502413 DOI: 10.3390/microorganisms10091875] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2022] [Revised: 09/15/2022] [Accepted: 09/16/2022] [Indexed: 01/03/2023] Open
Abstract
Bats have been identified as reservoirs of zoonotic and potentially zoonotic pathogens. Significant progress was made in the field of molecular biology with regard to infectious diseases, especially those that infect more than one species. Molecular methods, sequencing and bioinformatics have recently become irreplaceable tools in emerging infectious diseases research and even outbreak prediction. Modern methods in the molecular biology field have shed more light on the unique relationship between bats and viruses. Here we provide readers with a concise summary of the potential and limitations of molecular methods for studying the ecology of bats and bat-related pathogens and microorganisms.
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11
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Freuling CM, Busch F, Vos A, Ortmann S, Lohr F, Hedimbi N, Peter J, Nelson HA, Shoombe K, Shilongo A, Gorejena B, Kaholongo L, Khaiseb S, van der Westhuizen J, Dietze K, Geurtse G, Müller T. Oral rabies vaccination of dogs—Experiences from a field trial in Namibia. PLoS Negl Trop Dis 2022; 16:e0010422. [PMID: 35994498 PMCID: PMC9436088 DOI: 10.1371/journal.pntd.0010422] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Revised: 09/01/2022] [Accepted: 06/24/2022] [Indexed: 11/29/2022] Open
Abstract
Dog-mediated rabies is responsible for tens of thousands of human deaths annually, and in resource-constrained settings, vaccinating dogs to control the disease at source remains challenging. Currently, rabies elimination efforts rely on mass dog vaccination by the parenteral route. To increase the herd immunity, free-roaming and stray dogs need to be specifically addressed in the vaccination campaigns, with oral rabies vaccination (ORV) of dogs being a possible solution. Using a third-generation vaccine and a standardized egg-flavoured bait, bait uptake and vaccination was assessed under field conditions in Namibia. During this trial, both veterinary staff as well as dog owners expressed their appreciation to this approach of vaccination. Of 1,115 dogs offered a bait, 90% (n = 1,006, 95%CI:91–94) consumed the bait and 72.9% (n = 813, 95%CI:70.2–75.4) of dogs were assessed as being vaccinated by direct observation, while for 11.7% (n = 130, 95%CI:9.9–17.7) the status was recorded as “unkown” and 15.4% (n = 172, 95%CI: 13.4–17.7) were considered as being not vaccinated. Smaller dogs and dogs offered a bait with multiple other dogs had significantly higher vaccination rates, while other factors, e.g. sex, confinement status and time had no influence. The favorable results of this first large-scale field trial further support the strategic integration of ORV into dog rabies control programmes. Given the acceptance of the egg-flavored bait under various settings worldwide, ORV of dogs could become a game-changer in countries, where control strategies using parenteral vaccination alone failed to reach sufficient vaccination coverage in the dog population. Rabies in dogs can be prevented by vaccination, and this approach has become a cornerstone in the control and eventual elimination of the disease. However, vaccinating hard-to-reach often free-roaming dogs are a challenge and represents one of the challenges to reach sufficient herd-immunity. A potential solution would be to vaccinate these dogs using oral baits filled with a vaccine. In this study we have assessed the acceptability of oral rabies vaccination (ORV) in Namibian dogs under field conditions. The results demonstrate that the method is acceptable both for the owners and the dogs, with a very high uptake of the egg-flavored bait. This supports the potential of ORV to contribute to vaccination programs where parenteral vaccination alone failed to reach sufficient vaccination coverage in the dog population.
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Affiliation(s)
- Conrad Martin Freuling
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut (FLI), WHO Collaborating Centre for Rabies Surveillance and Research, WOAH Reference Laboratory for Rabies, Greifswald-Insel Riems, Germany
- * E-mail:
| | - Frank Busch
- Institute of International Animal Health/One Health, Friedrich-Loeffler-Institut (FLI), Greifswald-Insel Riems, Germany
| | - Adriaan Vos
- Ceva Innovation Center GmbH, Dessau–Rosslau, Germany
| | | | | | - Nehemia Hedimbi
- Animal Disease Control, Kunene, Ministry of Agriculture, Water & Land Reform, Directorate of Veterinary Services, State Veterinary Office, Opuwo, Namibia
| | - Josephat Peter
- Directorate of Veterinary Services, State Veterinary Office, Omusati, Namibia
| | | | - Kenneth Shoombe
- Deputy Chief Veterinary Officer, Animal Disease Control, North, Ministry of Agriculture, Water & Land Reform, Directorate of Veterinary Services, State Veterinary Office, Ongwediva, Namibia
| | - Albertina Shilongo
- Chief Veterinary Officer, Directorate of Veterinary Services, Ministry of Agriculture, Water and Land Reform, Windhoek, Namibia
| | - Brighton Gorejena
- Faculty of Agriculture and Natural Resources, Ogongo Campus, University of Namibia, Wnindhoek, Namibia
| | - Lukas Kaholongo
- Faculty of Agriculture and Natural Resources, Ogongo Campus, University of Namibia, Wnindhoek, Namibia
| | - Siegfried Khaiseb
- Central Veterinary Laboratory, Directorate of Veterinary Services (DVS), Ministry of Agriculture Water and Land Reform, Windhoek, Namibia
| | - Jolandie van der Westhuizen
- Central Veterinary Laboratory, Directorate of Veterinary Services (DVS), Ministry of Agriculture Water and Land Reform, Windhoek, Namibia
| | - Klaas Dietze
- Institute of International Animal Health/One Health, Friedrich-Loeffler-Institut (FLI), Greifswald-Insel Riems, Germany
| | | | - Thomas Müller
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut (FLI), WHO Collaborating Centre for Rabies Surveillance and Research, WOAH Reference Laboratory for Rabies, Greifswald-Insel Riems, Germany
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12
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Tierradentro-García LO, Cortés-Albornoz MC, Talero-Gutiérrez C. Of love and other demons: depicting human rabies in Colombia. Heliyon 2022; 8:e09703. [PMID: 35734566 PMCID: PMC9207665 DOI: 10.1016/j.heliyon.2022.e09703] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2021] [Revised: 07/08/2021] [Accepted: 06/06/2022] [Indexed: 11/18/2022] Open
Abstract
Human rabies has been described by various cultures in many countries around the world. Gabriel García Márquez's novel Of love and other demons recounts the story of a girl who, in colonial Colombia in the 18th century, was bitten by a rabid dog. This paper aims to review the general status of the disease in Colombia and interweave it with García Márquez's book. Developed countries have successfully controlled dog-mediated rabies virus transmission, whereas in some countries in Latin America wildlife and canine rabies are still an issue. Our approach suggests that although the measures that have been taken to mitigate dog-transmitted rabies have worked well in most parts of the world, greater efforts are required to control sylvatic rabies transmitted by bats or other mammals, as occurs in Colombia. Since developing countries are the most affected by the disease at present, transdisciplinary commitment between human and veterinary sectors is necessary to fight against rabies virus transmission.
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Affiliation(s)
- Luis Octavio Tierradentro-García
- Department of Radiology, Children's Hospital of Philadelphia, Philadelphia, PA, USA
- Neuroscience Research Group (NeURos), Escuela de Medicina y Ciencias de La Salud, Universidad Del Rosario, Bogotá D.C., Colombia
- Centro de Neurociencia Neurovitae-UR, Escuela de Medicina y Ciencias de La Salud, Universidad Del Rosario, Bogotá D.C., Colombia
- Corresponding author.
| | - María Camila Cortés-Albornoz
- Neuroscience Research Group (NeURos), Escuela de Medicina y Ciencias de La Salud, Universidad Del Rosario, Bogotá D.C., Colombia
- Centro de Neurociencia Neurovitae-UR, Escuela de Medicina y Ciencias de La Salud, Universidad Del Rosario, Bogotá D.C., Colombia
| | - Claudia Talero-Gutiérrez
- Neuroscience Research Group (NeURos), Escuela de Medicina y Ciencias de La Salud, Universidad Del Rosario, Bogotá D.C., Colombia
- Centro de Neurociencia Neurovitae-UR, Escuela de Medicina y Ciencias de La Salud, Universidad Del Rosario, Bogotá D.C., Colombia
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13
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Condori RE, Aragon A, Breckenridge M, Pesko K, Mower K, Ettestad P, Melman S, Velasco-Villa A, Orciari LA, Yager P, Streicker DG, Gigante CM, Morgan C, Wallace R, Li Y. Divergent Rabies Virus Variant of Probable Bat Origin in 2 Gray Foxes, New Mexico, USA. Emerg Infect Dis 2022; 28:1137-1145. [PMID: 35608558 PMCID: PMC9155866 DOI: 10.3201/eid2806.211718] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
Abstract
In the Western Hemisphere, bat-associated rabies viruses (RABVs) have established independent transmission cycles in multiple mammal hosts, forming genetically distinct lineages. In New Mexico, USA, skunks, bats, and gray foxes are rabies reservoir hosts and represent a public health risk because of encounters with humans. During 2015 and 2019, two previously undescribed RABVs were detected in 2 gray foxes (Urocyon cinereoargenteus) in Lincoln County, New Mexico. Phylogenetic analysis of the nucleoprotein gene indicated that the isolates are a novel RABV variant. These 2 cases probably represent repeated spillover events from an unknown bat reservoir to gray foxes. Molecular analysis of rabies cases across New Mexico identified that other cross-species transmission events were the result of viral variants previously known to be enzootic to New Mexico. Despite a robust rabies public health surveillance system in the United States, advances in testing and surveillance techniques continue to identify previously unrecognized zoonotic pathogens.
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14
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Horta MA, Ledesma LA, Moura WC, Lemos ERS. From dogs to bats: Concerns regarding vampire bat-borne rabies in Brazil. PLoS Negl Trop Dis 2022; 16:e0010160. [PMID: 35239665 PMCID: PMC8893325 DOI: 10.1371/journal.pntd.0010160] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Affiliation(s)
- Marco Aurélio Horta
- BSL-3 Facility, Oswaldo Cruz Institute, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
- * E-mail:
| | - Leandro Augusto Ledesma
- Instituto Nacional de Infectologia Evandro Chagas, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
| | - Wlamir Correa Moura
- Instituto Nacional de Controle de Qualidade em Saúde, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
| | - Elba Regina Sampaio Lemos
- Laboratory of Hantavirus and Rickettsiosis, Oswaldo Cruz Institute, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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15
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De Benedictis P, Leopardi S, Markotter W, Velasco-Villa A. The Importance of Accurate Host Species Identification in the Framework of Rabies Surveillance, Control and Elimination. Viruses 2022; 14:v14030492. [PMID: 35336899 PMCID: PMC8954416 DOI: 10.3390/v14030492] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Revised: 01/31/2022] [Accepted: 02/23/2022] [Indexed: 02/03/2023] Open
Abstract
Accurate host identification is paramount to understand disease epidemiology and to apply appropriate control measures. This is especially important for multi-host pathogens such as the rabies virus, a major and almost invariably fatal zoonosis that has mobilized unanimous engagement at an international level towards the final goal of zero human deaths due to canine rabies. Currently, diagnostic laboratories implement a standardized identification using taxonomic keys. However, this method is challenged by high and undiscovered biodiversity, decomposition of carcasses and subjective misevaluation, as has been attested to by findings from a cohort of 242 archived specimens collected across Sub-Saharan Africa and submitted for rabies diagnosis. We applied two simple and cheap methods targeting the Cytochrome b and Cytochrome c oxidase subunit I to confirm the initial classification. We therefore suggest prioritizing a standardized protocol that includes, as a first step, the implementation of taxonomic keys at a family or subfamily level, followed by the molecular characterization of the host species.
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Affiliation(s)
- Paola De Benedictis
- FAO Reference Center for Rabies, Istituto Zooprofilattico Sperimentale delle Venezie, 35020 Legnaro, Italy;
- Correspondence:
| | - Stefania Leopardi
- FAO Reference Center for Rabies, Istituto Zooprofilattico Sperimentale delle Venezie, 35020 Legnaro, Italy;
| | - Wanda Markotter
- Centre for Viral Zoonoses, Department of Medical Virology, Faculty of Health Sciences, University of Pretoria, Pretoria 0001, South Africa;
| | - Andres Velasco-Villa
- Centers for Diseases Control and Prevention, 1600 Clifton Rd. NE, Atlanta, GA 30333, USA;
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16
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Rabies Virus Variants Detected from Cougar (Puma concolor) in Mexico 2000–2021. Pathogens 2022; 11:pathogens11020265. [PMID: 35215207 PMCID: PMC8875920 DOI: 10.3390/pathogens11020265] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2022] [Revised: 02/08/2022] [Accepted: 02/14/2022] [Indexed: 12/04/2022] Open
Abstract
In 2019, the World Health Organization (WHO) and the Pan-American Health Organization (PAHO) recognized Mexico as a country free of human rabies transmitted by dogs. Nevertheless, the sylvatic cycle remains as a public health concern in the country. Although cougars (Puma concolor) are not reservoirs of any rabies virus variant (RVV), these felines could act as vectors at the top of the food chain, and their relationships with other organisms must be considered important for the regulatory effect on their prey’s populations. In this study, genetic and antigenic characterization was performed on all cougar rabies cases diagnosed at the Rabies Laboratory Network of the Ministry of Health (RLNMH) in Mexico from 2000 to 2021. Samples from other species, a skunk, a horse (Equus caballus) (attacked by a cougar), and a gray fox (Urocyon cineroargenteus), were included as reference. Rabies cases in cougars were restricted to two Northern states of Mexico (Sonora and Chihuahua). Five out of six samples of cougars were RVV7 (Arizona gray fox RVV) and one from Sonora was RVV1. Interestingly, there is no evidence of RVV1 in dogs in the Northern states since the 1990s but skunk species now harbor this RVV1 in this region of the country.
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17
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Klein A, Eggerbauer E, Potratz M, Zaeck LM, Calvelage S, Finke S, Müller T, Freuling CM. Comparative pathogenesis of different phylogroup I bat lyssaviruses in a standardized mouse model. PLoS Negl Trop Dis 2022; 16:e0009845. [PMID: 35041652 PMCID: PMC8797209 DOI: 10.1371/journal.pntd.0009845] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2021] [Revised: 01/28/2022] [Accepted: 12/14/2021] [Indexed: 12/24/2022] Open
Abstract
A plethora of bat-associated lyssaviruses potentially capable of causing the fatal disease rabies are known today. Transmitted via infectious saliva, occasionally-reported spillover infections from bats to other mammals demonstrate the permeability of the species-barrier and highlight the zoonotic potential of bat-related lyssaviruses. However, it is still unknown whether and, if so, to what extent, viruses from different lyssavirus species vary in their pathogenic potential. In order to characterize and systematically compare a broader group of lyssavirus isolates for their viral replication kinetics, pathogenicity, and virus release through saliva-associated virus shedding, we used a mouse infection model comprising a low (102 TCID50) and a high (105 TCID50) inoculation dose as well as three different inoculation routes (intramuscular, intranasal, intracranial). Clinical signs, incubation periods, and survival were investigated. Based on the latter two parameters, a novel pathogenicity matrix was introduced to classify lyssavirus isolates. Using a total of 13 isolates from ten different virus species, this pathogenicity index varied within and between virus species. Interestingly, Irkut virus (IRKV) and Bokeloh bat lyssavirus (BBLV) obtained higher pathogenicity scores (1.14 for IRKV and 1.06 for BBLV) compared to rabies virus (RABV) isolates ranging between 0.19 and 0.85. Also, clinical signs differed significantly between RABV and other bat lyssaviruses. Altogether, our findings suggest a high diversity among lyssavirus isolates concerning survival, incubation period, and clinical signs. Virus shedding significantly differed between RABVs and other lyssaviruses. Our results demonstrated that active shedding of infectious virus was exclusively associated with two RABV isolates (92% for RABV-DogA and 67% for RABV-Insectbat), thus providing a potential explanation as to why sustained spillovers are solely attributed to RABVs. Interestingly, 3D imaging of a selected panel of brain samples from bat-associated lyssaviruses demonstrated a significantly increased percentage of infected astrocytes in mice inoculated with IRKV (10.03%; SD±7.39) compared to RABV-Vampbat (2.23%; SD±2.4), and BBLV (0.78%; SD±1.51), while only individual infected cells were identified in mice infected with Duvenhage virus (DUVV). These results corroborate previous studies on RABV that suggest a role of astrocyte infection in the pathogenicity of lyssaviruses. Globally, there are at present 17 different officially recognized lyssavirus species posing a potential threat for human and animal health. Bats have been identified as carriers for the vast majority of those zoonotic viruses, which cause the fatal disease rabies and are transmitted through infectious saliva. The occurrence of sporadic spillover events where lyssaviruses are spread from bats to other mammalian species highlights the importance of studying pathogenicity and virus shedding in regard to a potentially sustained onward cross-species transmission. Therefore, as part of this study, we compared 13 different isolates from ten lyssavirus species in a standardized mouse infection model, focusing on clinical signs, incubation periods, and survival. Based on the latter two, a novel pathogenicity index to classify different lyssavirus species was established. This pathogenicity index varied within and between different lyssavirus species and revealed a higher ranking of other bat-related lyssaviruses in comparison to the tested Rabies virus (RABV) isolates. Altogether, our results demonstrate a high diversity among the investigated isolates concerning pathogenicity and clinical picture. Furthermore, we comparatively analyzed virus shedding via saliva and while there was no indication towards a reduced pathogenicity of bat-associated lyssaviruses as opposed to RABV, shedding was increased in RABV isolates. Additionally, we investigated neuronal cell tropism and revealed that bat lyssaviruses are not only capable of infecting neurons but also astrocytes.
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Affiliation(s)
- Antonia Klein
- Friedrich-Loeffler-Institut (FLI), Federal Research Institute for Animal Health, Greifswald-Insel Riems, Germany
| | - Elisa Eggerbauer
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut (FLI), Federal Research Institute for Animal Health, Greifswald-Insel Riems, Germany
| | - Madlin Potratz
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut (FLI), Federal Research Institute for Animal Health, Greifswald-Insel Riems, Germany
| | - Luca M. Zaeck
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut (FLI), Federal Research Institute for Animal Health, Greifswald-Insel Riems, Germany
| | - Sten Calvelage
- Institute of Diagnostic Virology, Federal Research Institute for Animal Health, Friedrich-Loeffler-Institut (FLI), Greifswald-Insel Riems, Germany
| | - Stefan Finke
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut (FLI), Federal Research Institute for Animal Health, Greifswald-Insel Riems, Germany
| | - Thomas Müller
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut (FLI), Federal Research Institute for Animal Health, Greifswald-Insel Riems, Germany
| | - Conrad M. Freuling
- Friedrich-Loeffler-Institut (FLI), Federal Research Institute for Animal Health, Greifswald-Insel Riems, Germany
- * E-mail:
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18
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Müller T, Hassel R, Jago M, Khaiseb S, van der Westhuizen J, Vos A, Calvelage S, Fischer S, Marston DA, Fooks AR, Höper D, Freuling CM. Rabies in kudu: Revisited. Adv Virus Res 2022; 112:115-173. [DOI: 10.1016/bs.aivir.2022.04.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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19
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Pavli A, Maltezou HC. Travel vaccines throughout history. Travel Med Infect Dis 2022; 46:102278. [PMID: 35167951 PMCID: PMC8837496 DOI: 10.1016/j.tmaid.2022.102278] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Revised: 02/08/2022] [Accepted: 02/10/2022] [Indexed: 12/18/2022]
Abstract
Vaccinations are an important component of travel medicine. Beyond protection of travelers, vaccines are administered to prevent the importation of vaccine-preventable diseases at home and at destination. Proof of immunization to travel dates back to the first smallpox vaccine, developed by Edward Jenner in 1796. However, it took one century to generate the next vaccines against cholera, rabies, and typhoid fever. During the 20th century the armamentarium of vaccines used in travelers largely expanded with yellow fever, poliomyelitis, tetravalent meningococcal, and hepatitis A vaccines. The International Certificate of Inoculation and Vaccination was implemented in 1933. Currently there are vaccines administered to travelers following risk assessment, but also vaccines required according to the 2005 International Health Regulations and vaccines required at certain countries. Finally, within less than one year after the declaration of the coronavirus disease 2019 (COVID-19) pandemic, the first COVID-19 vaccines were launched and approved for emergency use to control the pandemic. Despite practical and ethical challenges, COVID-19 vaccine verifications have been widely used since spring 2021 in many activities, including international travel. In this article, we review the course of development of travel vaccines focusing on those for which a proof of vaccination has been or is required.
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Affiliation(s)
- Androula Pavli
- Department of Travel Medicine, National Public Health Organization, Athens, Greece
| | - Helena C. Maltezou
- Directorate of Research, Studies, and Documentation, National Public Health Organization, Athens, Greece,Corresponding author. Directorate for Research, Studies, and Documentation, National Public Health Organization, 3-5 Agrafon Street, Athens, 15123, Greece
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20
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Deviatkin AA, Vakulenko YA, Dashian MA, Lukashev AN. Evaluating the Impact of Anthropogenic Factors on the Dissemination of Contemporary Cosmopolitan, Arctic, and Arctic-like Rabies Viruses. Viruses 2021; 14:66. [PMID: 35062270 PMCID: PMC8777955 DOI: 10.3390/v14010066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Accepted: 12/29/2021] [Indexed: 11/16/2022] Open
Abstract
Rabies is a globally prevalent viral zoonosis that causes 59,000 deaths per year and has important economic consequences. Most virus spread is associated with the migration of its primary hosts. Anthropogenic dissemination, mainly via the transportation of rabid dogs, shaped virus ecology a few hundred years ago and is responsible for several current outbreaks. A systematic analysis of aberrant long-distance events in the steppe and Arctic-like groups of rabies virus was performed using statistical (Bayesian) phylogeography and plots of genetic vs. geographic distances. The two approaches produced similar results but had some significant differences and complemented each other. No phylogeographic analysis could be performed for the Arctic group because polar foxes transfer the virus across the whole circumpolar region at high velocity, and there was no correlation between genetic and geographic distances in this virus group. In the Arctic-like group and the steppe subgroup of the cosmopolitan group, a significant number of known sequences (15-20%) was associated with rapid long-distance transfers, which mainly occurred within Eurasia. Some of these events have been described previously, while others have not been documented. Most of the recent long-distance transfers apparently did not result in establishing the introduced virus, but a few had important implications for the phylogeographic history of rabies. Thus, human-mediated long-distance transmission of the rabies virus remains a significant threat that needs to be addressed.
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Affiliation(s)
- Andrei A. Deviatkin
- Laboratory of Molecular Biology and Biochemistry, Institute of Molecular Medicine, Sechenov First Moscow State Medical University, 119435 Moscow, Russia
- The National Medical Research Center for Endocrinology, 117036 Moscow, Russia
| | - Yulia A. Vakulenko
- Martsinovsky Institute of Medical Parasitology, Tropical and Vector Borne Diseases, Sechenov First Moscow State Medical University, 119435 Moscow, Russia; (Y.A.V.); (A.N.L.)
- Department of Virology, Faculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia
| | - Mariia A. Dashian
- Faculty of Biomedicine, Pirogov Medical University, 117997 Moscow, Russia;
| | - Alexander N. Lukashev
- Martsinovsky Institute of Medical Parasitology, Tropical and Vector Borne Diseases, Sechenov First Moscow State Medical University, 119435 Moscow, Russia; (Y.A.V.); (A.N.L.)
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21
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Hyeon JY, Risatti GR, Helal ZH, McGinnis H, Sims M, Hunt A, Chung DH, Kim J, Desiato J, Lee DH. Whole Genome Sequencing and Phylogenetic Analysis of Rabies Viruses from Bats in Connecticut, USA, 2018-2019. Viruses 2021; 13:v13122500. [PMID: 34960769 PMCID: PMC8704678 DOI: 10.3390/v13122500] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Revised: 12/04/2021] [Accepted: 12/08/2021] [Indexed: 11/25/2022] Open
Abstract
We performed whole genome sequencing and genetic characterization of rabies viruses (RABV) detected in bats submitted to the Connecticut Veterinary Medical Diagnostic Laboratory (CVMDL) during 2018–2019. Among 88 bats submitted to CVMDL, six brain samples (6.8%, 95% confidence interval: 1.6% to 12.1%) tested positive by direct fluorescent antibody test. RABVs were detected in big brown bats (Eptesicus fuscus, n = 4), a hoary bat (Lasiurus cinereus, n = 1), and an unidentified bat species (n = 1). Complete coding sequences of four out of six detected RABVs were obtained. In phylogenetic analysis, the RABVs (18-62, 18-4347, and 19-2274) from big brown bats belong to the bats EF-E1 clade, clustering with RABVs detected from the same bat species in Pennsylvania and New Jersey. The bat RABV (19-2898) detected from the migratory hoary bat belongs to the bats LC clade, clustering with the eleven viruses detected from the same species in Arizona, Washington, Idaho, and Tennessee. The approach used in this study generated novel data regarding genetic relationships of RABV variants, including their reservoirs, and their spatial origin and it would be useful as reference data for future investigations on RABV in North America. Continued surveillance and genome sequencing of bat RABV would be needed to monitor virus evolution and transmission, and to assess the emergence of genetic mutations that may be relevant for public health.
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Affiliation(s)
- Ji-Yeon Hyeon
- Connecticut Veterinary Medical Diagnostic Laboratory, Department of Pathobiology and Veterinary Science, College of Agriculture, Health and Natural Resources, University of Connecticut, Storrs, CT 06269, USA; (J.-Y.H.); (G.R.R.); (Z.H.H.); (H.M.); (M.S.); (A.H.)
| | - Guillermo R. Risatti
- Connecticut Veterinary Medical Diagnostic Laboratory, Department of Pathobiology and Veterinary Science, College of Agriculture, Health and Natural Resources, University of Connecticut, Storrs, CT 06269, USA; (J.-Y.H.); (G.R.R.); (Z.H.H.); (H.M.); (M.S.); (A.H.)
| | - Zeinab H. Helal
- Connecticut Veterinary Medical Diagnostic Laboratory, Department of Pathobiology and Veterinary Science, College of Agriculture, Health and Natural Resources, University of Connecticut, Storrs, CT 06269, USA; (J.-Y.H.); (G.R.R.); (Z.H.H.); (H.M.); (M.S.); (A.H.)
| | - Holly McGinnis
- Connecticut Veterinary Medical Diagnostic Laboratory, Department of Pathobiology and Veterinary Science, College of Agriculture, Health and Natural Resources, University of Connecticut, Storrs, CT 06269, USA; (J.-Y.H.); (G.R.R.); (Z.H.H.); (H.M.); (M.S.); (A.H.)
| | - Maureen Sims
- Connecticut Veterinary Medical Diagnostic Laboratory, Department of Pathobiology and Veterinary Science, College of Agriculture, Health and Natural Resources, University of Connecticut, Storrs, CT 06269, USA; (J.-Y.H.); (G.R.R.); (Z.H.H.); (H.M.); (M.S.); (A.H.)
| | - Amelia Hunt
- Connecticut Veterinary Medical Diagnostic Laboratory, Department of Pathobiology and Veterinary Science, College of Agriculture, Health and Natural Resources, University of Connecticut, Storrs, CT 06269, USA; (J.-Y.H.); (G.R.R.); (Z.H.H.); (H.M.); (M.S.); (A.H.)
| | - David H. Chung
- Genomics and Molecular Epidemiology Research Laboratory, Department of Pathobiology and Veterinary Science, College of Agriculture, Health and Natural Resources, University of Connecticut, Storrs, CT 06269, USA; (D.H.C.); (J.K.); (J.D.)
| | - Junwon Kim
- Genomics and Molecular Epidemiology Research Laboratory, Department of Pathobiology and Veterinary Science, College of Agriculture, Health and Natural Resources, University of Connecticut, Storrs, CT 06269, USA; (D.H.C.); (J.K.); (J.D.)
| | - Julia Desiato
- Genomics and Molecular Epidemiology Research Laboratory, Department of Pathobiology and Veterinary Science, College of Agriculture, Health and Natural Resources, University of Connecticut, Storrs, CT 06269, USA; (D.H.C.); (J.K.); (J.D.)
| | - Dong-Hun Lee
- Genomics and Molecular Epidemiology Research Laboratory, Department of Pathobiology and Veterinary Science, College of Agriculture, Health and Natural Resources, University of Connecticut, Storrs, CT 06269, USA; (D.H.C.); (J.K.); (J.D.)
- Correspondence: ; Tel.: +1-860-486-1138
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22
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Quinlan LM. The Puppy in the Pit: Osteobiography of an Eighteenth-Century Dog at the Three Cranes Tavern, Massachusetts. INTERNATIONAL JOURNAL OF HISTORICAL ARCHAEOLOGY 2021; 27:363-392. [PMID: 34785878 PMCID: PMC8581961 DOI: 10.1007/s10761-021-00636-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Accepted: 10/07/2021] [Indexed: 05/29/2023]
Abstract
Boston's "Big Dig" construction project resulted in the excavation of multiple archaeological sites dating from the seventeenth to nineteenth centuries, including the Great House/Three Cranes Tavern in Charlestown, Massachusetts (USA). An otherwise unremarkable pit below the tavern foundation contained bones originally identified as a cat skeleton, which has subsequently been reidentified as a dog. This paper discusses site context, osteological evidence for the dog's reclassification, and the shifts in cultural meaning this may indicate. Employing an osteobiographical approach, it draws together points of connection between the modern skeletal assessment, a series of 1980s excavations, and the motivations of eighteenth-century tavern inhabitants.
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Affiliation(s)
- Liz M. Quinlan
- Archaeology, University of York, Environment Building, Wentworth Way, York, YO10 5NG UK
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Veals AM, Koprowski JL, Bergman DL, VerCauteren KC, Wester DB. Occurrence of mesocarnivores in montane sky islands: How spatial and temporal overlap informs rabies management in a regional hotspot. PLoS One 2021; 16:e0259260. [PMID: 34739496 PMCID: PMC8570508 DOI: 10.1371/journal.pone.0259260] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2021] [Accepted: 10/15/2021] [Indexed: 11/18/2022] Open
Abstract
Interspecific interactions among mesocarnivores can influence community dynamics and resource partitioning. Insights into these interactions can enhance understanding of local ecological processes that have impacts on pathogen transmission, such as the rabies lyssavirus. Host species ecology can provide an important baseline for disease management strategies especially in biologically diverse ecosystems and heterogeneous landscapes. We used a mesocarnivore guild native to the southwestern United States, a regional rabies hotspot, that are prone to rabies outbreaks as our study system. Gray foxes (Urocyon cinereoargenteus), striped skunks (Mephitis mephitis), bobcats (Lynx rufus), and coyotes (Canis latrans) share large portions of their geographic ranges and can compete for resources, occupy similar niches, and influence population dynamics of each other. We deployed 80 cameras across two mountain ranges in Arizona, stratified by vegetation type. We used two-stage modeling to gain insight into species occurrence and co-occurrence patterns. There was strong evidence for the effects of elevation, season, and temperature impacting detection probability of all four species, with understory height and canopy cover also influencing gray foxes and skunks. For all four mesocarnivores, a second stage multi-species co-occurrence model better explained patterns of detection than the single-species occurrence model. These four species are influencing the space use of each other and are likely competing for resources seasonally. We did not observe spatial partitioning between these competitors, likely due to an abundance of cover and food resources in the biologically diverse system we studied. From our results we can draw inferences on community dynamics to inform rabies management in a regional hotspot. Understanding environmental factors in disease hotspots can provide useful information to develop more reliable early-warning systems for viral outbreaks. We recommend that disease management focus on delivering oral vaccine baits onto the landscape when natural food resources are less abundant, specifically during the two drier seasons in Arizona (pre-monsoon spring and autumn) to maximize intake by all mesocarnivores.
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Affiliation(s)
- Amanda M. Veals
- School of Natural Resources and the Environment, University of Arizona, Tucson, Arizona, United States of America
| | - John L. Koprowski
- School of Natural Resources and the Environment, University of Arizona, Tucson, Arizona, United States of America
| | - David L. Bergman
- United States Department of Agriculture, Animal and Plant Health Inspection Service-Wildlife Services, Phoenix, Arizona, United States of America
| | - Kurt C. VerCauteren
- United States Department of Agriculture, National Wildlife Research Center, Animal and Plant Health Inspection Service-Wildlife Services, Fort Collins, Colorado, United States of America
| | - David B. Wester
- Texas A&M University-Kingsville, Kingsville, Texas, United States of America
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Spillover of West Caucasian Bat Lyssavirus (WCBV) in a Domestic Cat and Westward Expansion in the Palearctic Region. Viruses 2021; 13:v13102064. [PMID: 34696493 PMCID: PMC8540014 DOI: 10.3390/v13102064] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2021] [Revised: 10/04/2021] [Accepted: 10/11/2021] [Indexed: 12/15/2022] Open
Abstract
In June 2020, a cat from Arezzo (Italy) that died from a neurological disease was diagnosed with West Caucasian Bat Lyssavirus (WCBV). The virus retained high identity across the whole-genome with the reference isolate found in 2002 from a Russian bent-winged bat. We applied control measures recommended by national regulations, investigated a possible interface between cats and bats using visual inspections, bioacoustics analyses and camera trapping and performed active and passive surveillance in bats to trace the source of infection. People that were exposed to the cat received full post-exposure prophylaxis while animals underwent six months of quarantine. One year later, they are all healthy. In a tunnel located near the cat’s house, we identified a group of bent-winged bats that showed virus-neutralizing antibodies to WCBV across four sampling occasions, but no virus in salivary swabs. Carcasses from other bat species were all negative. This description of WCBV in a non-flying mammal confirms that this virus can cause clinical rabies in the absence of preventive and therapeutic measures, and highlights the lack of international guidelines against divergent lyssaviruses. We detected bent-winged bats as the most probable source of infection, testifying the encroachment between these bats and pets/human in urban areas and confirming free-ranging cats as potential hazard for public health and conservation.
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Meske M, Fanelli A, Rocha F, Awada L, Soto PC, Mapitse N, Tizzani P. Evolution of Rabies in South America and Inter-Species Dynamics (2009-2018). Trop Med Infect Dis 2021; 6:98. [PMID: 34207822 PMCID: PMC8293400 DOI: 10.3390/tropicalmed6020098] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2021] [Revised: 05/30/2021] [Accepted: 06/01/2021] [Indexed: 11/26/2022] Open
Abstract
Rabies is listed as one of the World Health Organisation's (WHO) Neglected Tropical Diseases Worldwide, with a significant impact in South America. This paper explores the dynamics of rabies cases in humans, pets (dogs and cats), livestock and wildlife (bats in particular) in South America during the period 2009-2018. The data used in this study were derived from the two main databases for rabies in South America: the OIE-WAHIS from the World Organisation for Animal Health (OIE) and PANAFTOSA's Regional Information System for the Epidemiological Surveillance of Rabies (SIRVERA). Being a neglected disease with possible underreporting in some areas, the reported rabies cases may not always represent the real disease burden. The analysis focuses on the evolution of the number of cases in time and their spatial distribution, as well as on the main source of infections in humans, determined by laboratory assays of the antigenic variant or through epidemiological investigations. Additionally, Generalised Linear Mixed Models (GLMM) were used to evaluate the risk factors associated with the occurrence of human cases. Our results show that the highest impact of the disease in terms of number of cases was reported on livestock, while the overall number of cases (in animals and humans) progressively decreased along the study period. The spatial distribution of rabies in livestock showed two main clusters in the north-western (mainly Colombia) and in the south-eastern part of the affected area (Brazil), and a third smaller cluster in Peru. A cluster in dogs was observed in Bolivia. Out of the 192 human cases reported during the study period, 70% of them were transmitted by bats. The number of human cases reported during the study period were significantly associated with the number of rabies cases reported in livestock, pets and wildlife. Despite the overall decreasing case report rate, the disease still represents a major animal and public health concern in South America, and new strategies for compiling systematic information, networking and education are needed, as well as the education and training of veterinary staff.
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Affiliation(s)
- Mauro Meske
- OIE—World Organisation for Animal Health, 75017 Paris, France; (M.M.); (L.A.); (P.C.S.); (N.M.)
| | - Angela Fanelli
- Department of Veterinary Medicine, University of Bari, 70121 Bari, Italy;
| | - Felipe Rocha
- PAHO-WHO-PANAFTOSA-Centro Panamericano de Fiebre Aftosa y Salud Pública Veterinaria, Regional Information System for the Epidemiological Surveillance of Rabies (SIRVERA), 25045-002 Duque de Caixas, Brazil;
| | - Lina Awada
- OIE—World Organisation for Animal Health, 75017 Paris, France; (M.M.); (L.A.); (P.C.S.); (N.M.)
| | - Paula Caceres Soto
- OIE—World Organisation for Animal Health, 75017 Paris, France; (M.M.); (L.A.); (P.C.S.); (N.M.)
| | - Neo Mapitse
- OIE—World Organisation for Animal Health, 75017 Paris, France; (M.M.); (L.A.); (P.C.S.); (N.M.)
| | - Paolo Tizzani
- OIE—World Organisation for Animal Health, 75017 Paris, France; (M.M.); (L.A.); (P.C.S.); (N.M.)
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León B, González SF, Solís LM, Ramírez-Cardoce M, Moreira-Soto A, Cordero-Solórzano JM, Hutter SE, González-Barrientos R, Rupprecht CE. Rabies in Costa Rica - Next Steps Towards Controlling Bat-Borne Rabies After its Elimination in Dogs. THE YALE JOURNAL OF BIOLOGY AND MEDICINE 2021; 94:311-329. [PMID: 34211351 PMCID: PMC8223541] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
Rabies is an acute, progressive encephalitis caused by a lyssavirus, with the highest case fatality of any conventional infectious disease. More than 17 different lyssaviruses have been described, but rabies virus is the most widely distributed and important member of the genus. Globally, tens of thousands of human fatalities still occur each year. Although all mammals are susceptible, most human fatalities are caused by the bites of rabid dogs, within lesser developed countries. A global plan envisions the elimination of human rabies cases caused via dogs by the year 2030. The combination of prophylaxis of exposed humans and mass vaccination of dogs is an essential strategy for such success. Regionally, the Americas are well on the way to meet this goal. As one example of achievement, Costa Rica, a small country within Central America, reported the last autochthonous case of human rabies transmitted by a dog at the end of the 1970s. Today, rabies virus transmitted by the common vampire bat, Desmodus rotundus, as well as other wildlife, remains a major concern for humans, livestock, and other animals throughout the region. This review summarizes the historical occurrence of dog rabies and its elimination in Costa Rica, describes the current occurrence of the disease with a particular focus upon affected livestock, discusses the ecology of the vampire bat as the primary reservoir relevant to management, details the clinical characteristics of recent human rabies cases, and provides suggestions for resolution of global challenges posed by this zoonosis within a One Health context.
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Affiliation(s)
- Bernal León
- Biosecurity Laboratory, Servicio Nacional de Salud
Animal (SENASA), LANASEVE, Heredia, Costa Rica
- Universidad Técnica Nacional (UTN), Quesada, Costa
Rica
| | | | - Lisa Miranda Solís
- Specialist in Pediatric Pathology, Pathology Service,
Children National Hospital, Caja Costarricense de Seguro Social, San José, Costa
Rica
| | - Manuel Ramírez-Cardoce
- Specialist in Infectious Diseases, San Juan de Dios
Hospital, Caja Costarricense de Seguro Social, San José, Costa Rica
| | - Andres Moreira-Soto
- Research Center for Tropical Diseases (CIET), Virology,
Faculty of Microbiology, University of Costa Rica, San José, Costa Rica
- Charité-Universitätsmedizin Berlin, corporate member of
Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute
of Health, Institute of Virology, Berlin, Germany
| | | | - Sabine Elisabeth Hutter
- Coordinator of the National Risk Analysis Program,
Epidemiology Department, SENASA, Ministry of Agriculture, San José, Costa
Rica
- Institute of Food Safety, Food Technology and
Veterinary Public Health, Department for Farm Animals and Veterinary Public
Health University of Veterinary Medicine, Vienna, Austria
| | - Rocío González-Barrientos
- Pathology Area Biosecurity Laboratory, Servicio
Nacional de Salud Animal (SENASA), LANASEVE, Heredia, Costa Rica
- Department of Biomedical Sciences of Anatomic
Pathology, Cornell University, Ithaca, NY, USA
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Isolation of a Novel Bat Rhabdovirus with Evidence of Human Exposure in China. mBio 2021; 13:e0287521. [PMID: 35164557 PMCID: PMC8844929 DOI: 10.1128/mbio.02875-21] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
Abstract
Bats are well-recognized reservoirs of zoonotic viruses. Several spillover events from bats to humans have been reported, causing severe epidemic or endemic diseases including severe acute respiratory syndrome-coronavirus 2 (SARS-CoV-2), SARS-CoV, Middle East respiratory syndrome-CoV (MERS-CoV), henipaviruses, and filoviruses. In this study, a novel rhabdovirus species, provisionally named Rhinolophus rhabdovirus DPuer (DPRV), was identified from the horseshoe bat (Rhinolophus affinis) in Yunnan province, China, using next-generation sequencing. DPRV shedding in the spleen, liver, lung, and intestinal contents of wild bats with high viral loads was detected by real-time quantitative PCR, indicating that DPRV has tropism for multiple host tissues. Furthermore, DPRV can replicate in vitro in multiple mammalian cell lines, including BHK-21, A549, and MA104 cells, with the highest efficiency in hamster kidney cell line BHK-21, suggesting infectivity of DPRV in these cell line-derived hosts. Ultrastructure analysis revealed a characteristic bullet-shaped morphology and tightly clustered distribution of DPRV particles in the intracellular space. DPRV replicated efficiently in suckling mouse brains and caused death of suckling mice; death rates increased with passaging of DPRV in suckling mice. Moreover, 421 serum samples were collected from individuals who lived near the bat collection site and had fever symptoms within 1 year. DPRV-specific antibodies were detected in 20 (4.75%) human serum samples by indirect immunofluorescence assay. Furthermore, 10 (2.38%) serum samples were DPRV positive according to plaque reduction neutralization assay, which revealed potential transmission of DPRV from bats to humans and highlighted the potential public health risk. Potential vector association with DPRV was not found with negative viral RNA in bloodsucking arthropods. IMPORTANCE We identified a novel rhabdovirus from the horseshoe bat (Rhinolophus thomasi) in China with probable infectivity in humans. DPRV was isolated in vitro from several mammalian cell lines, indicating wide host tropism, excluding bats, of DPRV. DPRV replicated in the brains of suckling mice, and the death rate of suckling mice increased with passaging of DPRV in vivo. Serological tests indicated the possible infectivity of DPRV in humans and the potential transmission to humans. The present findings provide preliminary evidence for the potential risk of DPRV to public health. Additional studies with active surveillance are needed to address interspecies transmission and determine the pathogenicity of DPRV in humans.
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Sauvé CC, Rees EE, Gilbert AT, Berentsen AR, Allibert A, Leighton PA. Modeling Mongoose Rabies in the Caribbean: A Model-Guided Fieldwork Approach to Identify Research Priorities. Viruses 2021; 13:v13020323. [PMID: 33672496 PMCID: PMC7923793 DOI: 10.3390/v13020323] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2021] [Revised: 02/12/2021] [Accepted: 02/14/2021] [Indexed: 12/25/2022] Open
Abstract
We applied the model-guided fieldwork framework to the Caribbean mongoose rabies system by parametrizing a spatially-explicit, individual-based model, and by performing an uncertainty analysis designed to identify parameters for which additional empirical data are most needed. Our analysis revealed important variation in output variables characterizing rabies dynamics, namely rabies persistence, exposure level, spatiotemporal distribution, and prevalence. Among epidemiological parameters, rabies transmission rate was the most influential, followed by rabies mortality and location, and size of the initial infection. The most influential landscape parameters included habitat-specific carrying capacities, landscape heterogeneity, and the level of resistance to dispersal associated with topography. Movement variables, including juvenile dispersal, adult fine-scale movement distances, and home range size, as well as life history traits such as age of independence, birth seasonality, and age- and sex-specific mortality were other important drivers of rabies dynamics. We discuss results in the context of mongoose ecology and its influence on disease transmission dynamics. Finally, we suggest empirical approaches and study design specificities that would provide optimal contributing data addressing the knowledge gaps identified by our approach, and would increase our potential to use epidemiological models to guide mongoose rabies control and management in the Caribbean.
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Affiliation(s)
- Caroline C. Sauvé
- Epidemiology of Zoonoses and Public Health Research Group (GREZOSP), Faculty of Veterinary Medicine, Université de Montréal, 3190 Rue Sicotte, Saint-Hyacinthe, QC J2S 2M2, Canada; (E.E.R.); (A.A.); (P.A.L.)
- Centre de Recherche en Santé Publique, 7101 Avenue du Parc, Montréal, QC H3N 1X9, Canada
- Correspondence:
| | - Erin E. Rees
- Epidemiology of Zoonoses and Public Health Research Group (GREZOSP), Faculty of Veterinary Medicine, Université de Montréal, 3190 Rue Sicotte, Saint-Hyacinthe, QC J2S 2M2, Canada; (E.E.R.); (A.A.); (P.A.L.)
- Centre de Recherche en Santé Publique, 7101 Avenue du Parc, Montréal, QC H3N 1X9, Canada
- National Microbiology Laboratory, Public Health Agency of Canada, 3190 Rue Sicotte, Saint-Hyacinthe, QC J2S 2M2, Canada
| | - Amy T. Gilbert
- National Wildlife Research Center, Wildlife Services, Animal and Plant Health Inspection Service, United Sates Department of Agriculture, 4101 LaPorte Avenue, Fort Collins, CO 80521, USA; (A.T.G.); (A.R.B.)
| | - Are R. Berentsen
- National Wildlife Research Center, Wildlife Services, Animal and Plant Health Inspection Service, United Sates Department of Agriculture, 4101 LaPorte Avenue, Fort Collins, CO 80521, USA; (A.T.G.); (A.R.B.)
| | - Agathe Allibert
- Epidemiology of Zoonoses and Public Health Research Group (GREZOSP), Faculty of Veterinary Medicine, Université de Montréal, 3190 Rue Sicotte, Saint-Hyacinthe, QC J2S 2M2, Canada; (E.E.R.); (A.A.); (P.A.L.)
- Centre de Recherche en Santé Publique, 7101 Avenue du Parc, Montréal, QC H3N 1X9, Canada
| | - Patrick A. Leighton
- Epidemiology of Zoonoses and Public Health Research Group (GREZOSP), Faculty of Veterinary Medicine, Université de Montréal, 3190 Rue Sicotte, Saint-Hyacinthe, QC J2S 2M2, Canada; (E.E.R.); (A.A.); (P.A.L.)
- Centre de Recherche en Santé Publique, 7101 Avenue du Parc, Montréal, QC H3N 1X9, Canada
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Luo DS, Li B, Shen XR, Jiang RD, Zhu Y, Wu J, Fan Y, Bourhy H, Hu B, Ge XY, Shi ZL, Dacheux L. Characterization of Novel Rhabdoviruses in Chinese Bats. Viruses 2021; 13:v13010064. [PMID: 33466539 PMCID: PMC7824899 DOI: 10.3390/v13010064] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2020] [Revised: 12/24/2020] [Accepted: 12/30/2020] [Indexed: 12/25/2022] Open
Abstract
Bats, the second largest order of mammals worldwide, harbor specific characteristics such as sustaining flight, a special immune system, unique habits, and ecological niches. In addition, they are the natural reservoirs of a variety of emerging or re-emerging zoonotic pathogens. Rhabdoviridae is one of the most diverse families of RNA viruses, which consists of 20 ecologically diverse genera, infecting plants, mammals, birds, reptiles, and fish. To date, three bat-related genera are described, named Lyssavirus, Vesiculovirus, and Ledantevirus. However, the prevalence and the distribution of these bat-related rhabdoviruses remain largely unknown, especially in China. To fill this gap, we performed a large molecular retrospective study based on the real-time reverse transcription polymerase chain reaction (RT-qPCR) detection of lyssavirus in bat samples (1044 brain and 3532 saliva samples, from 63 different bat species) originating from 21 provinces of China during 2006–2018. None of them were positive for lyssavirus, but six bat brains (0.6%) of Rhinolophus bat species, originating from Hubei and Hainan provinces, were positive for vesiculoviruses or ledanteviruses. Based on complete genomes, these viruses were phylogenetically classified into three putative new species, tentatively named Yinshui bat virus (YSBV), Taiyi bat virus (TYBV), and Qiongzhong bat virus (QZBV). These results indicate the novel rhabdoviruses circulated in different Chinese bat populations.
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Affiliation(s)
- Dong-Sheng Luo
- CAS Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China; (D.-S.L.); (B.L.); (X.-R.S.); (R.-D.J.); (Y.Z.); (J.W.); (Y.F.); (B.H.)
- University of Chinese Academy of Sciences, Beijing 100049, China
- Institut Pasteur, Lyssavirus Epidemiology and Neuropathology Unit, 75724 Paris, France;
| | - Bei Li
- CAS Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China; (D.-S.L.); (B.L.); (X.-R.S.); (R.-D.J.); (Y.Z.); (J.W.); (Y.F.); (B.H.)
| | - Xu-Rui Shen
- CAS Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China; (D.-S.L.); (B.L.); (X.-R.S.); (R.-D.J.); (Y.Z.); (J.W.); (Y.F.); (B.H.)
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ren-Di Jiang
- CAS Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China; (D.-S.L.); (B.L.); (X.-R.S.); (R.-D.J.); (Y.Z.); (J.W.); (Y.F.); (B.H.)
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yan Zhu
- CAS Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China; (D.-S.L.); (B.L.); (X.-R.S.); (R.-D.J.); (Y.Z.); (J.W.); (Y.F.); (B.H.)
| | - Jia Wu
- CAS Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China; (D.-S.L.); (B.L.); (X.-R.S.); (R.-D.J.); (Y.Z.); (J.W.); (Y.F.); (B.H.)
| | - Yi Fan
- CAS Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China; (D.-S.L.); (B.L.); (X.-R.S.); (R.-D.J.); (Y.Z.); (J.W.); (Y.F.); (B.H.)
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Hervé Bourhy
- Institut Pasteur, Lyssavirus Epidemiology and Neuropathology Unit, 75724 Paris, France;
| | - Ben Hu
- CAS Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China; (D.-S.L.); (B.L.); (X.-R.S.); (R.-D.J.); (Y.Z.); (J.W.); (Y.F.); (B.H.)
| | - Xing-Yi Ge
- Hunan Provincial Key Laboratory of Medical Virology, College of Biology, Hunan University, Changsha 410082, China;
| | - Zheng-Li Shi
- CAS Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China; (D.-S.L.); (B.L.); (X.-R.S.); (R.-D.J.); (Y.Z.); (J.W.); (Y.F.); (B.H.)
- University of Chinese Academy of Sciences, Beijing 100049, China
- Correspondence: (Z.-L.S.); (L.D.); Tel.: +86-02787197311 (Z.-L.S.); +33-140613303 (L.D.)
| | - Laurent Dacheux
- Institut Pasteur, Lyssavirus Epidemiology and Neuropathology Unit, 75724 Paris, France;
- Correspondence: (Z.-L.S.); (L.D.); Tel.: +86-02787197311 (Z.-L.S.); +33-140613303 (L.D.)
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30
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Evaluation of the Worldwide Occurrence of Rabies in Dogs and Cats Using a Simple and Homogenous Framework for Quantitative Risk Assessments of Rabies Reintroduction in Disease-Free Areas through Pet Movements. Vet Sci 2020; 7:vetsci7040207. [PMID: 33353001 PMCID: PMC7766548 DOI: 10.3390/vetsci7040207] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2020] [Revised: 12/11/2020] [Accepted: 12/18/2020] [Indexed: 12/31/2022] Open
Abstract
Dog and cat rabies cases imported from rabies enzootic countries represent a major threat for areas that have acquired rabies-free status and quantitative risk analyses (QRAs) are developed in order to assess this risk of rabies reintroduction through dog and cat movements. Herein we describe a framework to evaluate dog and cat rabies incidence levels in exporting countries along with the associated uncertainty for such QRAs. For enzootic dog rabies areas (EDRAs), we extended and adapted a previously published method to specify the relationship between dog rabies vaccination coverage and canine rabies incidence; the relationship between dog and cat rabies incidences; and then to predict annual dog and cat rabies incidences. In non-enzootic dog rabies areas (nEDRAs), we provided annual incidence based on declared dog and cat rabies cases. For EDRAs, we predicted an annual incidence potentially greater than 1.5% in dogs and about ten times lower in cats with a high burden in Africa and Asia but much lower in Latin America. In nEDRAs, the occurrence of rabies was lower and of similar magnitude in dogs and cats. However, wildlife could still potentially infect dogs and cats through spillover events. This framework can directly be incorporated in QRAs of rabies reintroduction.
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Dell'Armelina Rocha PR, Velasco-Villa A, de Lima EM, Salomoni A, Fusaro A, da Conceição Souza E, Negreiros RL, Zafino VL, Zamperin G, Leopardi S, Monne I, Benedictis PD. Unexpected rabies variant identified in kinkajou ( Potos flavus), Mato Grosso, Brazil. Emerg Microbes Infect 2020; 9:851-854. [PMID: 32403984 PMCID: PMC7269027 DOI: 10.1080/22221751.2020.1759380] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
A second case of a novel rabies variant described once in a capuchin monkey from Mato Grosso, Brazil, was discovered in a rabid wild kinkajou from the same region, indicating a public health risk following exposure to either of the two animals.
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Affiliation(s)
- Paulo Ricardo Dell'Armelina Rocha
- Graduate Program in Environmental and Experimental Pathology, Paulista University, São Paulo, Brazil.,Graduate Program in Veterinary Sciences, Faculty of Veterinary Medicine, University of Turin, Turin (TO), Italy
| | - Andres Velasco-Villa
- Poxvirus and Rabies Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging and Zoonotic Infectious Diseases, CDC, Atlanta, GA, USA
| | - Ernani Machado de Lima
- Laboratorio de Apoio a Saude Animal (LASA), Complexo do Instituto de Defesa Agropecuaria do Estado de Mato Grosso, Cuiaba, Brazil
| | - Angela Salomoni
- FAO and National Reference Centre for rabies, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro (PD), Italy
| | - Alice Fusaro
- FAO and National Reference Centre for rabies, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro (PD), Italy
| | - Eunice da Conceição Souza
- Laboratorio de Apoio a Saude Animal (LASA), Complexo do Instituto de Defesa Agropecuaria do Estado de Mato Grosso, Cuiaba, Brazil
| | - Risia Lopes Negreiros
- Laboratorio de Apoio a Saude Animal (LASA), Complexo do Instituto de Defesa Agropecuaria do Estado de Mato Grosso, Cuiaba, Brazil
| | - Vera Lúcia Zafino
- Laboratorio de Apoio a Saude Animal (LASA), Complexo do Instituto de Defesa Agropecuaria do Estado de Mato Grosso, Cuiaba, Brazil
| | - Gianpiero Zamperin
- FAO and National Reference Centre for rabies, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro (PD), Italy
| | - Stefania Leopardi
- FAO and National Reference Centre for rabies, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro (PD), Italy
| | - Isabella Monne
- FAO and National Reference Centre for rabies, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro (PD), Italy
| | - Paola De Benedictis
- FAO and National Reference Centre for rabies, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro (PD), Italy
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Worsley-Tonks KEL, Escobar LE, Biek R, Castaneda-Guzman M, Craft ME, Streicker DG, White LA, Fountain-Jones NM. Using host traits to predict reservoir host species of rabies virus. PLoS Negl Trop Dis 2020; 14:e0008940. [PMID: 33290391 PMCID: PMC7748407 DOI: 10.1371/journal.pntd.0008940] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2020] [Revised: 12/18/2020] [Accepted: 11/02/2020] [Indexed: 11/18/2022] Open
Abstract
Wildlife are important reservoirs for many pathogens, yet the role that different species play in pathogen maintenance frequently remains unknown. This is the case for rabies, a viral disease of mammals. While Carnivora (carnivores) and Chiroptera (bats) are the canonical mammalian orders known to be responsible for the maintenance and onward transmission of rabies Lyssavirus (RABV), the role of most species within these orders remains unknown and is continually changing as a result of contemporary host shifting. We combined a trait-based analytical approach with gradient boosting machine learning models to identify physiological and ecological host features associated with being a reservoir for RABV. We then used a cooperative game theory approach to determine species-specific traits associated with known RABV reservoirs. Being a carnivore reservoir for RABV was associated with phylogenetic similarity to known RABV reservoirs, along with other traits such as having larger litters and earlier sexual maturity. For bats, location in the Americas and geographic range were the most important predictors of RABV reservoir status, along with having a large litter. Our models identified 44 carnivore and 34 bat species that are currently not recognized as RABV reservoirs, but that have trait profiles suggesting their capacity to be or become reservoirs. Further, our findings suggest that potential reservoir species among bats and carnivores occur both within and outside of areas with current RABV circulation. These results show the ability of a trait-based approach to detect potential reservoirs of infection and could inform rabies control programs and surveillance efforts by identifying the types of species and traits that facilitate RABV maintenance and transmission.
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Affiliation(s)
- Katherine E. L. Worsley-Tonks
- Department of Veterinary Population Medicine, University of Minnesota, Saint Paul, Minnesota, United States of America
| | - Luis E. Escobar
- Department of Fish and Wildlife Conservation, Virginia Tech, Blacksburg, Virginia, United States of America
| | - Roman Biek
- Institute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, United Kingdom
| | - Mariana Castaneda-Guzman
- Department of Fish and Wildlife Conservation, Virginia Tech, Blacksburg, Virginia, United States of America
| | - Meggan E. Craft
- Department of Veterinary Population Medicine, University of Minnesota, Saint Paul, Minnesota, United States of America
- Department of Ecology, Evolution and Behavior, University of Minnesota, Saint Paul, Minnesota, United States of America
| | - Daniel G. Streicker
- Institute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, United Kingdom
- MRC-University of Glasgow Centre for Virus Research, Glasgow, United Kingdom
| | - Lauren A. White
- National Socio-Environmental Synthesis Center, University of Maryland, Annapolis, Maryland, United States of America
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Rysava K, Mancero T, Caldas E, de Carvalho MF, Castro APB, Gutiérrez V, Haydon DT, Johnson PCD, Mancy R, Montebello LR, Rocha SM, Gonzalez Roldan JF, Vigilato MAN, Vilas VDR, Hampson K. Towards the elimination of dog-mediated rabies: development and application of an evidence-based management tool. BMC Infect Dis 2020; 20:778. [PMID: 33081712 PMCID: PMC7574347 DOI: 10.1186/s12879-020-05457-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2019] [Accepted: 09/27/2020] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND International organizations advocate for the elimination of dog-mediated rabies, but there is only limited guidance on interpreting surveillance data for managing elimination programmes. With the regional programme in Latin America approaching elimination of dog-mediated rabies, we aimed to develop a tool to evaluate the programme's performance and generate locally-tailored rabies control programme management guidance to overcome remaining obstacles. METHODS We developed and validated a robust algorithm to classify progress towards rabies elimination within sub-national administrative units, which we applied to surveillance data from Brazil and Mexico. The method combines criteria that are easy to understand, including logistic regression analysis of case detection time series, assessment of rabies virus variants, and of incursion risk. Subjecting the algorithm to robustness testing, we further employed simulated data sub-sampled at differing levels of case detection to assess the algorithm's performance and sensitivity to surveillance quality. RESULTS Our tool demonstrated clear epidemiological transitions in Mexico and Brazil: most states progressed rapidly towards elimination, but a few regressed due to incursions and control lapses. In 2015, dog-mediated rabies continued to circulate in the poorest states, with foci remaining in only 1 of 32 states in Mexico, and 2 of 27 in Brazil, posing incursion risks to the wider region. The classification tool was robust in determining epidemiological status irrespective of most levels of surveillance quality. In endemic settings, surveillance would need to detect less than 2.5% of all circulating cases to result in misclassification, whereas in settings where incursions become the main source of cases the threshold detection level for correct classification should not be less than 5%. CONCLUSION Our tool provides guidance on how to progress effectively towards elimination targets and tailor strategies to local epidemiological situations, while revealing insights into rabies dynamics. Post-campaign assessments of dog vaccination coverage in endemic states, and enhanced surveillance to verify and maintain freedom in states threatened by incursions were identified as priorities to catalyze progress towards elimination. Our finding suggests genomic surveillance should become increasingly valuable during the endgame for discriminating circulating variants and pinpointing sources of incursions.
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Affiliation(s)
- Kristyna Rysava
- University of Warwick, School of Life Sciences, Gibbet Hill Road, Coventry, UK
- University of Glasgow, Institute of Biodiversity, Animal Health and Comparative Medicine, Graham Kerr building, MVLS, Glasgow, G12 8QQ UK
| | - Tamara Mancero
- Pan American Health Organization (PAHO), Duque de Caxias, Rio de Janeiro, Brazil
| | - Eduardo Caldas
- Virology, Central Laboratory, State Center for Health Surveillance, State Department of Health, São Paulo, Rio Grande do Sul Brazil
| | | | | | | | - Daniel T. Haydon
- University of Glasgow, Institute of Biodiversity, Animal Health and Comparative Medicine, Graham Kerr building, MVLS, Glasgow, G12 8QQ UK
| | - Paul C. D. Johnson
- University of Glasgow, Institute of Biodiversity, Animal Health and Comparative Medicine, Graham Kerr building, MVLS, Glasgow, G12 8QQ UK
| | - Rebecca Mancy
- University of Glasgow, Institute of Biodiversity, Animal Health and Comparative Medicine, Graham Kerr building, MVLS, Glasgow, G12 8QQ UK
| | | | | | | | | | - Victor Del Rio Vilas
- Pan American Health Organization (PAHO), Duque de Caxias, Rio de Janeiro, Brazil
- University of Surrey, School of Veterinary Medicine, VSM Building, Guildford, UK
| | - Katie Hampson
- University of Glasgow, Institute of Biodiversity, Animal Health and Comparative Medicine, Graham Kerr building, MVLS, Glasgow, G12 8QQ UK
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Becker DJ, Broos A, Bergner LM, Meza DK, Simmons NB, Fenton MB, Altizer S, Streicker DG. Temporal patterns of vampire bat rabies and host connectivity in Belize. Transbound Emerg Dis 2020. [PMCID: PMC8246562 DOI: 10.1111/tbed.13754] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Daniel J. Becker
- Odum School of Ecology University of Georgia Athens GA USA
- Center for the Ecology of Infectious Disease University of Georgia Athens GA USA
- Department of Biology Indiana University Bloomington IN USA
| | - Alice Broos
- MRC–University of Glasgow Centre for Virus Research Glasgow UK
| | - Laura M. Bergner
- MRC–University of Glasgow Centre for Virus Research Glasgow UK
- Institute of Biodiversity, Animal Health and Comparative Medicine University of Glasgow Glasgow UK
| | - Diana K. Meza
- MRC–University of Glasgow Centre for Virus Research Glasgow UK
- Institute of Biodiversity, Animal Health and Comparative Medicine University of Glasgow Glasgow UK
| | - Nancy B. Simmons
- Department of Mammalogy Division of Vertebrate Zoology American Museum of Natural History New York NY USA
| | | | - Sonia Altizer
- Odum School of Ecology University of Georgia Athens GA USA
- Center for the Ecology of Infectious Disease University of Georgia Athens GA USA
| | - Daniel G. Streicker
- Odum School of Ecology University of Georgia Athens GA USA
- MRC–University of Glasgow Centre for Virus Research Glasgow UK
- Institute of Biodiversity, Animal Health and Comparative Medicine University of Glasgow Glasgow UK
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Oliveira RN, Freire CC, Iamarino A, Zanotto PM, Pessoa R, Sanabani SS, Souza SPD, Castilho JG, Batista HBCR, Carnieli P, Macedo CI, Watanabe JT, Brandão PE. Rabies virus diversification in aerial and terrestrial mammals. Genet Mol Biol 2020; 43:e20190370. [PMID: 32745160 PMCID: PMC7416755 DOI: 10.1590/1678-4685-gmb-2019-0370] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Accepted: 06/17/2020] [Indexed: 12/25/2022] Open
Abstract
Rabies is a fatal zoonotic infection of the central nervous system of mammals and has been known to humans for millennia. The etiological agent, is a neurotropic RNA virus in the order Mononegavirales, family Rhabdoviridae, genus Lyssavirus. There are currently accepted to be two cycles for rabies transmission: the urban cycle and the sylvatic cycle. The fact that both cycles originated from a common RABV or lyssavirus ancestor and the adaptive divergence that occurred since then as this ancestor virus adapted to a wide range of fitness landscapes represented by reservoir species in the orders Carnivora and Chiroptera led to the emergence of the diverse RABV lineages currently found in the sylvatic and urban cycles. Here we study full genome phylogenies and the time to the most recent common ancestor (TMRCA) of the RABVs in the sylvatic and urban cycles. Results show that there were differences between the nucleotide substitution rates per site per year for the same RABV genes maintained independently in the urban and sylvatic cycles. The results identify the most suitable gene for phylogenetic analysis, heterotachy among RABV genes and the TMRCA for the two cycles.
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Affiliation(s)
- Rafael N Oliveira
- Instituto Pasteur, Laboratório de Biologia Molecular, São Paulo, SP, Brazil
| | - Caio C Freire
- Universidade de São Paulo, Instituto de Ciências Biomédicas (ICB-II), Departamento de Microbiologia, Laboratório de Evolução Molecular e Bioinformática, São Paulo, SP, Brazil
| | - Atila Iamarino
- Universidade de São Paulo, Instituto de Ciências Biomédicas (ICB-II), Departamento de Microbiologia, Laboratório de Evolução Molecular e Bioinformática, São Paulo, SP, Brazil
| | - Paolo M Zanotto
- Universidade de São Paulo, Instituto de Ciências Biomédicas (ICB-II), Departamento de Microbiologia, Laboratório de Evolução Molecular e Bioinformática, São Paulo, SP, Brazil
| | - Rodrigo Pessoa
- Universidade de São Paulo, Instituto de Medicina Tropical de São Paulo, Departamento de Virologia, São Paulo, SP, Brazil
| | - Sabri S Sanabani
- Universidade de São Paulo, Instituto de Medicina Tropical de São Paulo, Departamento de Virologia, São Paulo, SP, Brazil
| | | | - Juliana G Castilho
- Instituto Pasteur, Laboratório de Biologia Molecular, São Paulo, SP, Brazil
| | | | - Pedro Carnieli
- Instituto Pasteur, Laboratório de Biologia Molecular, São Paulo, SP, Brazil
| | - Carla I Macedo
- Instituto Pasteur, Laboratório de Biologia Molecular, São Paulo, SP, Brazil
| | - Jaqueline T Watanabe
- Universidade de São Paulo, Instituto de Medicina Tropical de São Paulo, Departamento de Virologia, São Paulo, SP, Brazil
| | - Paulo E Brandão
- Universidade de São Paulo, Faculdade de Medicina Veterinária e Zootecnica, Departamento de Medicina Veterinária Preventiva e Saúde Animal, São Paulo, SP, Brazil
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Botto Nuñez G, Becker DJ, Lawrence RL, Plowright RK. Synergistic Effects of Grassland Fragmentation and Temperature on Bovine Rabies Emergence. ECOHEALTH 2020; 17:203-216. [PMID: 32699950 PMCID: PMC7885335 DOI: 10.1007/s10393-020-01486-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2019] [Revised: 04/01/2020] [Accepted: 06/02/2020] [Indexed: 06/11/2023]
Abstract
In 2007, common vampire bats were the source of the first outbreak of paralytic bovine rabies in Uruguay. The outbreak coincided in space and time with the fragmentation of native grasslands for monospecific forestry for wood and cellulose production. Using spatial analyses, we show that the increase in grassland fragmentation, together with the minimum temperature in the winter, accounts for the spatial pattern of outbreaks in the country. We propose that fragmentation may increase the connectivity of vampire bat colonies by promoting the sharing of feeding areas, while temperature modulates their home range plasticity. While a recent introduction of the virus from neighboring Brazil could have had an effect on outbreak occurrence, we show here that the distribution of rabies cases is unlikely to be explained by only an invasion process from Brazil. In accordance with previous modeling efforts, an increase in connectivity may promote spatial persistence of rabies virus within vampire bat populations. Our results suggest that land use planning might help to reduce grassland fragmentation and thus reduce risk of rabies transmission to livestock. This will be especially important in the context of climatic changes and increasing minimum temperatures in the winter.
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Affiliation(s)
- Germán Botto Nuñez
- Department of Microbiology and Immunology, Bozeman Disease Ecology Lab, Montana State University, 109 Lewis Hall, Bozeman, MT, 59717, USA.
- Departamento de Métodos Cuantitativos, Facultad de Medicina, Universidad de la República, Montevideo, 11800, Uruguay.
- Programa para la Conservación de los Murciélagos de Uruguay, Museo Nacional de Historia Natural, Montevideo, 11000, Uruguay.
| | - Daniel J Becker
- Department of Biology, Indiana University, Bloomington, IN, 47405, USA
| | - Rick L Lawrence
- Spatial Sciences Center, Department of Land Resources and Environmental Sciences, Montana State University, Bozeman, MT, 59717, USA
| | - Raina K Plowright
- Department of Microbiology and Immunology, Bozeman Disease Ecology Lab, Montana State University, 109 Lewis Hall, Bozeman, MT, 59717, USA
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Phylogenetic analysis of the whole genome sequence of a dog lineage rabies virus detected from cattle in eastern China, 2019. Braz J Microbiol 2020; 51:1453-1458. [PMID: 32232744 DOI: 10.1007/s42770-020-00264-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2019] [Accepted: 03/19/2020] [Indexed: 10/24/2022] Open
Abstract
Rabies is an important zoonosis worldwide, and this disease is caused by the rabies virus. Dogs and bat are the major hosts of rabies virus; however, many animals could infect with the rabies virus. By biting or scratching by an infected animal, rabies virus can be transmitted to cattle which is an important domestic animal in animal husbandry. Here, we report a case about a rabies virus (abbreviated JSTZ190314) found in cattle in eastern China in 2019. Our findings suggest that this rabies virus JSTZ190314 was a dog-origin rabies virus and belonged to the Asia clade. Furthermore, we found that this JSTZ190314-like rabies virus has been prevalent in China for more than 13 years and infected six species of animals. Our findings suggested that enhanced surveillance and research of rabies virus infection in bovine populations is needed.
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38
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Molecular detection of rabies virus strain with N-gene that clustered with China lineage 2 co-circulating with Africa lineages in Monrovia, Liberia: first reported case in Africa. Epidemiol Infect 2020; 147:e85. [PMID: 30868993 PMCID: PMC6518606 DOI: 10.1017/s0950268818003333] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
Despite a long history of dog-transmitted human rabies outbreaks in Liberia, West Africa, no reports exist of molecular characterisation of the causative lyssaviruses. This study investigated Rabies lyssavirus (RABV) strains isolated at the dog–human interface in Monrovia, Liberia 2016 and 2017, by reverse transcription polymerase chain reaction, using primers specific for the nucleoprotein (N) gene. Out of 20 specimens (19 dog brain samples and one human saliva) tested as suspected rabies cases, three (15%) were positive. Purified amplicons from all three positive specimens were sequenced in both forward and reverse directions. Phylogenetic analysis was conducted in MEGA7 and PhyML3 to determine their relationship with RABV sequences accessioned in NCBI GenBank. The first of three RABV strains detected clustered with China lineage 2 RABVs of dogs (99% homology to KU963489 and DQ666322). The second strain segregated with Africa lineage 2 RABVs also of dog origin, and the third strain segregated with Africa lineage 3 RABVs of Southern Africa viverrids. Our results show a transcontinental strain of rabies virus co-circulating with Africa lineages in post-conflict Liberia. This finding should stimulate more effective sub-regional planning and execution of one-health actions, towards stepwise surveillance and elimination of rabies in West Africa by 2030.
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Risk Modeling of Bat Rabies in the Caribbean Islands. Trop Med Infect Dis 2020; 5:tropicalmed5010035. [PMID: 32121504 PMCID: PMC7157685 DOI: 10.3390/tropicalmed5010035] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2019] [Revised: 02/19/2020] [Accepted: 02/21/2020] [Indexed: 01/01/2023] Open
Abstract
Rabies surveillance and control measures vary significantly between Caribbean islands. The Centers for Disease Control and Prevention currently recommends certain groups of U.S. travelers to any Caribbean island receive pre-exposure rabies immunization. However, most islands self-declare as "rabies free", and have never publicly released data to support rabies-free claims. We used the Analytic Hierarchy Process to create pairwise comparison values among five risk factors determined by subject matter experts. Risk factor weights were calculated and used in a geospatial analysis to calculate a risk value for each island nation (higher values indicate higher risk). Risk values ranged from 8.73 (Trinidad) to 1.57 (The Bahamas, Turks and Caicos Islands). All four countries that have documented occurrences of laboratory confirmed rabid bats were ranked highest (Trinidad and Tobago, Grenada, Cuba, Dominican Republic), as well as Haiti. The top five highest risk countries that currently have no reports of bat rabies include St. Vincent and the Grenadines, Jamaica, Puerto Rico, the Cayman Islands, and Dominica. This study reviews the inter-island movement potential of bats, designates areas of high risk for bat-associated rabies within the Caribbean islands, and demonstrates a need for further surveillance efforts in bat populations within islands that self-declare as rabies free.
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Te Kamp V, Freuling CM, Vos A, Schuster P, Kaiser C, Ortmann S, Kretzschmar A, Nemitz S, Eggerbauer E, Ulrich R, Schinköthe J, Nolden T, Müller T, Finke S. Responsiveness of various reservoir species to oral rabies vaccination correlates with differences in vaccine uptake of mucosa associated lymphoid tissues. Sci Rep 2020; 10:2919. [PMID: 32076025 PMCID: PMC7031338 DOI: 10.1038/s41598-020-59719-4] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2019] [Accepted: 02/03/2020] [Indexed: 02/06/2023] Open
Abstract
Oral rabies vaccination (ORV) is highly effective in foxes and raccoon dogs, whereas for unknown reasons the efficacy of ORV in other reservoir species is less pronounced. To investigate possible variations in species-specific cell tropism and local replication of vaccine virus, different reservoir species including foxes, raccoon dogs, raccoons, mongooses, dogs and skunks were orally immunised with a highly attenuated, high-titred GFP-expressing rabies virus (RABV). Immunofluorescence and RT-qPCR screenings revealed clear differences among species suggesting host specific limitations to ORV. While for responsive species the palatine tonsils (tonsilla palatina) were identified as a main site of virus replication, less virus dissemination was observed in the tonsils of rather refractory species. While our comparison of vaccine virus tropism emphasizes the important role that the tonsilla palatina plays in eliciting an immune response to ORV, our data also indicate that other lymphoid tissues may have a more important role than originally anticipated. Overall, these data support a model in which the susceptibility to oral live RABV vaccine infection of lymphatic tissue is a major determinant in vaccination efficacy. The present results may help to direct future research for improving vaccine uptake and efficacy of oral rabies vaccines under field conditions.
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Affiliation(s)
- Verena Te Kamp
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut, WHO Collaborating Centre for Rabies Surveillance and Research, OIE Reference Laboratory for Rabies, Greifswald-Insel Riems, Germany
- Thescon GmbH, 48653, Coesfeld, Germany
| | - Conrad M Freuling
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut, WHO Collaborating Centre for Rabies Surveillance and Research, OIE Reference Laboratory for Rabies, Greifswald-Insel Riems, Germany
| | - Ad Vos
- Ceva Innovation Center GmbH, 06861, Dessau-Rosslau, Germany
| | - Peter Schuster
- Ceva Innovation Center GmbH, 06861, Dessau-Rosslau, Germany
| | | | | | | | - Sabine Nemitz
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut, WHO Collaborating Centre for Rabies Surveillance and Research, OIE Reference Laboratory for Rabies, Greifswald-Insel Riems, Germany
- BioNTech IMFS GmbH, 55743, Idar-Oberstein, Germany
| | - Elisa Eggerbauer
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut, WHO Collaborating Centre for Rabies Surveillance and Research, OIE Reference Laboratory for Rabies, Greifswald-Insel Riems, Germany
- Thüringer Landesamt für Verbraucherschutz, 99947, Bad Langensalza, Germany
| | - Reiner Ulrich
- Department of Experimental Animal Facilities and Biorisk Management, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany
- Institute of Veterinary Pathology, Faculty of Veterinary Medicine, Leipzig University, 04103, Leipzig, Germany
| | - Jan Schinköthe
- Department of Experimental Animal Facilities and Biorisk Management, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany
- Institute of Veterinary Pathology, Faculty of Veterinary Medicine, Leipzig University, 04103, Leipzig, Germany
| | - Tobias Nolden
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut, WHO Collaborating Centre for Rabies Surveillance and Research, OIE Reference Laboratory for Rabies, Greifswald-Insel Riems, Germany
- ViraTherapeutics GmbH, 6020, Innsbruck, Austria
| | - Thomas Müller
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut, WHO Collaborating Centre for Rabies Surveillance and Research, OIE Reference Laboratory for Rabies, Greifswald-Insel Riems, Germany
| | - Stefan Finke
- Institute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut, WHO Collaborating Centre for Rabies Surveillance and Research, OIE Reference Laboratory for Rabies, Greifswald-Insel Riems, Germany.
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Phylogenetic analysis of near full-length sequences of the Desmodus rotundus genetic lineage of rabies virus. INFECTION GENETICS AND EVOLUTION 2020; 80:104179. [PMID: 31917361 DOI: 10.1016/j.meegid.2020.104179] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2019] [Revised: 12/21/2019] [Accepted: 01/05/2020] [Indexed: 11/23/2022]
Abstract
The World Health Organization (WHO), reports that rabies causes tens of thousands of deaths every year killing humans, non-human primates and other animals. Rabies continues to be a public health issue, despite the existence of effective vaccines. The dogs remain the primary reservoir and transmitter of rabies to humans globally. In the Americas, bats are regarded as the second most common source of rabies virus to humans. The vampire bat Desmodus rotundus has been identified as a natural reservoir of rabies virus (RABV) in this region. The complete genome of the RABV variant maintained by populations of vampire bats D. rotundus has rarely been reported. In this study, we sequenced and analyzed the genome of a RABV variant detected in D. rotundus. The sample, collected from an endemic area in São Paulo State, was phylogenetically compared with the genome of the standard sample for species Rabies virus as well as other samples belonging to terrestrial and bat-associated cycles of rabies transmission, available in GenBank. Distinct patterns linked to the genetic lineage were identified. These data can aid in the understanding of the molecular epidemiology of this virus and the epidemiological importance of this species in the transmission of the RABV.
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Algahtani H, Shirah B, Chtourou E, Abuhawi O, Abdelghaffar N, Alshehri M. Feral dog bite causing paralytic rabies: Difficult diagnosis and failure of prevention. SAUDI JOURNAL FOR HEALTH SCIENCES 2020. [DOI: 10.4103/sjhs.sjhs_106_20] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022] Open
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43
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Re: Letter to the Editor in Response to 'Molecular detection of rabies virus strain with N-gene that clustered with China lineage 2 co-circulating with Africa lineages in Monrovia, Liberia: first reported case in Africa'. Epidemiol Infect 2019; 147:e318. [PMID: 31822315 PMCID: PMC7003635 DOI: 10.1017/s0950268819001973] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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Advances in RNA Vaccines for Preventive Indications: A Case Study of A Vaccine Against Rabies. Vaccines (Basel) 2019; 7:vaccines7040132. [PMID: 31569785 PMCID: PMC6963972 DOI: 10.3390/vaccines7040132] [Citation(s) in RCA: 44] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2019] [Revised: 09/15/2019] [Accepted: 09/19/2019] [Indexed: 12/25/2022] Open
Abstract
There is a global need for effective and affordable rabies vaccines, which is unmet by current vaccines due to limitations in their production capacities, required administration schedules, storage requirements, and cost. Many different experimental approaches previously used for bacterial and viral vaccines have been applied to rabies, but with variable success. One of the most promising new concepts is the use of messenger RNA (mRNA) in encoding the main rabies virus antigen, the envelope glycoprotein (RABV-G). CureVac has applied their proprietary technology platform for the production of mRNA to this problem, resulting in the rabies vaccine candidate CV7201. Following preclinical studies in mice and pigs showing that CV7201 could induce neutralizing immune responses that protected against rabies virus, different dosages and routes of administration of CV7201 were tested in a phase 1 human study. This clinical study proved that mRNA vaccination was safe and had an acceptable reactogenicity profile, but immune responses depended on the mode of administration, and they did not unequivocally support CV7201 for further development as a prophylactic vaccine with this particular formulation. Further, preclinical studies using RABV-G mRNA encapsulated in lipid nanoparticles (LNPs) showed an improved response in both mice and nonhuman primates, and these encouraging results are currently being followed up in clinical studies in humans. This review summarizes the recent advances in mRNA vaccines against rabies.
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Binns C, Low WY. Publish or the Population Perishes: The Challenges of Regional Publishing in Public Health. Asia Pac J Public Health 2019; 31:396-403. [PMID: 31142125 DOI: 10.1177/1010539519849966] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The publication of information is essential for expanding the benefits of public health throughout the Asia-Pacific region. All academics are familiar with the adage "Publish or perish," but for public health, this should be rewritten as "Publish or the population perishes." Publication and communication in public health continues to undergo rapid change. There are many challenges that a regional journal faces. The number of printed journals is beginning to decline. Digital publishing and extensive databases and search engines have become the only practical way to access data. But the advent of digital publishing has seen the arrival of profit-making entrepreneurs. Whether a Journal is in the printed form or digital, it remains the key communication in public health and ultimately improve the health of the people. The Asia-Pacific Journal of Public Health (APJPH), which is owned by Asia Pacific Academic Consortium for Public Health (APACPH) and published by Sage ensures that your data gets maximum digital exposure in the region where it can make a difference. Over the years, APJPH has increased its impact factor and gained in prestige. Although impact factor of a journal is important in documenting the recognition of work by academics, it does not necessarily reflect importance to our region. There needs to be a re-evaluation of publication and communication strategies so that all citizens of the Asia-Pacific region benefit.
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Affiliation(s)
- Colin Binns
- 1 Curtin University, Perth, Western Australia, Australia
| | - Wah Yun Low
- 2 University of Malaya, Kuala Lumpur, Malaysia
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Reddy GBM, Singh R, Singh KP, Sharma AK, Vineetha S, Saminathan M, Sajjanar B. Molecular epidemiological analysis of wild animal rabies isolates from India. Vet World 2019; 12:352-357. [PMID: 31089302 PMCID: PMC6487239 DOI: 10.14202/vetworld.2019.352-357] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2018] [Accepted: 01/18/2019] [Indexed: 11/16/2022] Open
Abstract
Aim This study was conducted to know the genetic variability of rabies viruses (RVs) from wild animals in India. Materials and Methods A total of 20 rabies suspected brain samples of wild animals from different states of India were included in the study. The samples were subjected for direct fluorescent antibody test (dFAT), reverse transcription polymerase chain reaction (RT-PCR), and quantitative reverse transcriptase real-time PCR (RT-qPCR). The phylogenetic analysis of partial nucleoprotein gene sequences was performed. Results Of 20 samples, 11, 10, and 12 cases were found positive by dFAT, RT-PCR, and RT-qPCR, respectively. Phylogenetic analysis showed that all Indian wild RVs isolates belonged to classical genotype 1 of Lyssavirus and were closely related to Arctic/Arctic-like single cluster indicating the possibility of a spillover of rabies among different species. Conclusion The results indicated the circulation of similar RVs in sylvatic and urban cycles in India. However, understanding the role of wild animals as reservoir host needs to be studied in India.
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Affiliation(s)
| | - Rajendra Singh
- Department of Veterinary Pathology, ICAR-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, India
| | - Karam Pal Singh
- Department of Veterinary Pathology, ICAR-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, India
| | - Anil Kumar Sharma
- Department of Veterinary Pathology, ICAR-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, India
| | - Sobharani Vineetha
- Department of Veterinary Pathology, ICAR-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, India
| | - Mani Saminathan
- Department of Veterinary Pathology, ICAR-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, India
| | - Basavaraj Sajjanar
- Department of Veterinary Pathology, ICAR-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, India
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Botto Nuñez G, Becker DJ, Plowright RK. The emergence of vampire bat rabies in Uruguay within a historical context. Epidemiol Infect 2019; 147:e180. [PMID: 31063102 PMCID: PMC6518465 DOI: 10.1017/s0950268819000682] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2018] [Revised: 02/21/2019] [Accepted: 03/18/2019] [Indexed: 12/21/2022] Open
Abstract
Pathogen spillover from wildlife to humans or domestic animals requires a series of conditions to align with space and time. Comparing these conditions between times and locations where spillover does and does not occur presents opportunities to understand the factors that shape spillover risk. Bovine rabies transmitted by vampire bats was first confirmed in 1911 and has since been detected across the distribution of vampire bats. However, Uruguay is an exception. Uruguay was free of bovine rabies until 2007, despite high-cattle densities, the presence of vampire bats and a strong surveillance system. To explore why Uruguay was free of bovine rabies until recently, we review the historic literature and reconstruct the conditions that would allow rabies invasion into Uruguay. We used available historical records on the abundance of livestock and wildlife, the vampire bat distribution and occurrence of rabies outbreaks, as well as environmental modifications, to propose four alternative hypotheses to explain rabies virus emergence and spillover: bat movement, viral invasion, surveillance failure and environmental changes. While future statistical modelling efforts will be required to disentangle these hypotheses, we here show how a detailed historical analysis can be used to generate testable predictions for the conditions leading to pathogen spillover.
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Affiliation(s)
- G. Botto Nuñez
- Department of Microbiology and Immunology, Montana State University, Bozeman, MT, USA
- Departamento de Métodos Cuantitativos, Facultad de Medicina, Universidad de la República, Montevideo, Uruguay
- Programa para la Conservación de los Murciélagos de Uruguay, Museo Nacional de Historia Natural, Montevideo, Uruguay
| | - D. J. Becker
- Department of Microbiology and Immunology, Montana State University, Bozeman, MT, USA
- Center for the Ecology of Infectious Disease, University of Georgia, Athens, GA, USA
| | - R. K. Plowright
- Department of Microbiology and Immunology, Montana State University, Bozeman, MT, USA
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Bonwitt J, Oltean H, Lang M, Kelly RM, Goldoft M. Bat rabies in Washington State: Temporal-spatial trends and risk factors for zoonotic transmission (2000-2017). PLoS One 2018; 13:e0205069. [PMID: 30300384 PMCID: PMC6177155 DOI: 10.1371/journal.pone.0205069] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2018] [Accepted: 09/18/2018] [Indexed: 01/29/2023] Open
Abstract
Background Rabies is a zoonotic viral disease that can affect all mammals. In the United States, the majority of human rabies cases are caused by bats, which are the only known reservoirs for rabies virus (RABV) in Washington State. We sought to characterize bat RABV epidemiology in Washington among bats submitted by the public for RABV testing. Methods We examined temporal and spatial trends in RABV positivity (% positive) for taxonomically identified bats submitted to diagnostic laboratories during 2006–2017. For a subset of Myotis species, we evaluated sensitivity and predictive value positive (PPV) of morphological identification keys, using mitochondrial markers (cytochrome b) as a reference. For bats tested during 2000–2016, we analyzed RABV positivity by circumstances of encounters with humans, cats, and dogs. Results During 2006–2017, RABV positivity for all bat species was 6.0% (176/2,928). Among species with ≥100 submissions, RABV positivity was 2.0%–11.7% and highest among big brown bats (Eptesicus fuscus). An increasing trend in annual positivity was significant only for big brown bats (P = 0.02), and was circumstantially linked to a geographic cluster. Sensitivity and PPV of morphological identification keys was high for M. evotis but varied for M. lucifugus, M. californicus, M. yumanensis, and M. septentrionalis. A positive RABV result was significantly associated with nonsynanthropic species, abnormal behavior, abnormal hiding, injury, biting, found in a body of water, found alive, found outdoors, and caught by a dog. Conclusion Monitoring passive RABV surveillance trends enables public health authorities to perform more accurate risk assessments. Differences in temporal and spatial trends in RABV positivity by bat species indicate the importance of collecting taxonomic data, although morphological identification can be unreliable for certain Myotis species. Current public health practices for RABV exposures should be maintained as RABV infection in bats can never be excluded without diagnostic testing.
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Affiliation(s)
- Jesse Bonwitt
- Epidemic Intelligence Service, Division of Scientific Education and Professional Development, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America
- Office of Communicable Disease Epidemiology, Washington State Department of Health, Shoreline, Washington, United States of America
- Department of Anthropology, University of Durham, Durham, United Kingdom
- * E-mail:
| | - Hanna Oltean
- Office of Communicable Disease Epidemiology, Washington State Department of Health, Shoreline, Washington, United States of America
| | - Misty Lang
- Public Health Laboratories, Washington State Department of Health, Shoreline, Washington, United States of America
| | - Rochelle M. Kelly
- Department of Biology, University of Washington, Seattle, Washington, United States of America
- Burke Museum of Natural History and Culture, University of Washington, Seattle, Washington, United States of America
| | - Marcia Goldoft
- Office of Communicable Disease Epidemiology, Washington State Department of Health, Shoreline, Washington, United States of America
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Seetahal JFR, Vokaty A, Vigilato MAN, Carrington CVF, Pradel J, Louison B, Sauers AV, Roopnarine R, Arrebato JCG, Millien MF, James C, Rupprecht CE. Rabies in the Caribbean: A Situational Analysis and Historic Review. Trop Med Infect Dis 2018; 3:E89. [PMID: 30274485 PMCID: PMC6160905 DOI: 10.3390/tropicalmed3030089] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2018] [Revised: 08/14/2018] [Accepted: 08/15/2018] [Indexed: 12/25/2022] Open
Abstract
Rabies virus is the only Lyssavirus species found in the Americas. In discussions about rabies, Latin America and the Caribbean are often grouped together. Our study aimed to independently analyse the rabies situation in the Caribbean and examine changes in rabies spatiotemporal epidemiology. A questionnaire was administered to the 33 member countries and territories of the Caribbean Animal Health Network (CaribVET) to collect current data, which was collated with a literature review. Rabies was endemic in ten Caribbean localities, with the dog, mongoose, and vampire bat identified as enzootic reservoirs. The majority of animal cases occurred in Puerto Rico, the Dominican Republic, and Haiti, while human cases only consistently occurred in the latter two areas. Rabies vaccination was conducted for high-risk animal populations with variable coverage, and rabies diagnostic capacities varied widely throughout the region. Illegal importation and natural migration of animals may facilitate the introduction of rabies virus variants into virus-naïve areas. Passive surveillance, together with enhanced methods and serological screening techniques, can therefore be of value. The insularity of the Caribbean makes it ideal for conducting pilot studies on reservoir host population management. Best practice guidelines developed for these reservoir hosts can be individually modified to the epidemiological status and available resources within each locality.
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Affiliation(s)
- Janine F R Seetahal
- Department of Preclinical Sciences, Faculty of Medical Sciences, The University of the West Indies, St. Augustine, Trinidad and Tobago.
| | - Alexandra Vokaty
- Pan American Health Organization (PAHO/WHO), Trinidad and Tobago Country Office, St. Clair, Trinidad and Tobago.
| | - Marco A N Vigilato
- Zoonosis Group, Pan American Foot-and-Mouth Disease Center (PANAFTOSA), Pan American Health Organization (PAHO/WHO), Rio de Janeiro, Brazil.
| | - Christine V F Carrington
- Department of Preclinical Sciences, Faculty of Medical Sciences, The University of the West Indies, St. Augustine, Trinidad and Tobago.
| | - Jennifer Pradel
- CIRAD, UMR ASTRE, Petit-Bourg, Guadeloupe F-97170, France.
- ASTRE, CIRAD, INRA, Univ Montpellier, Montpellier F-34398, France.
| | - Bowen Louison
- Veterinary and Livestock Division, Ministry of Agriculture, Ministerial Complex, Tanteen, St. George's, Grenada.
| | - Astrid Van Sauers
- Ministry of Agriculture, Animal husbandry and Health and Fisheries, Paramaribo, Suriname.
| | | | | | - Max F Millien
- Ministry of Agriculture, Natural Resources and Rural Development, Port-au-Prince, Haiti.
| | - Colin James
- National Health Surveillance Unit, Ministry of Health, Georgetown, Guyana.
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Amoroso MG, Russo D, Lanave G, Cistrone L, Pratelli A, Martella V, Galiero G, Decaro N, Fusco G. Detection and phylogenetic characterization of astroviruses in insectivorous bats from Central-Southern Italy. Zoonoses Public Health 2018; 65:702-710. [PMID: 29896884 PMCID: PMC7165808 DOI: 10.1111/zph.12484] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2017] [Revised: 03/14/2018] [Accepted: 05/05/2018] [Indexed: 01/11/2023]
Abstract
In recent years, bats have been found to harbour many viruses, raising several questions about their role as reservoirs and potential disseminators of zoonotic viruses. We investigated the presence of six virus families in bats in three regions of Central‐Southern Italy. Astroviruses were identified in seven of 13 bat species. Sequence analysis revealed marked genetic heterogeneity among the astroviruses identified, with nucleotide identity ranging between 60.26% and 87.62%. Astrovirus diversity was not associated with the bat species, the geographic areas or the bat colony, suggesting the circulation of several astrovirus strains in Italian ecosystems. Genetic diversification and interspecies transmission appear common in bat astroviruses and could provide, potentially, the bases for transmission to humans and other mammals. Yet overemphasizing this risk might have detrimental consequences for bat conservation and preservation of the important ecosystem services bats provide.
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Affiliation(s)
- Maria Grazia Amoroso
- Unit of Virology, Department of Animal Health, Istituto Zooprofilattico Sperimentale del Mezzogiorno, Portici, Naples, Italy
| | - Danilo Russo
- Wildlife Research Unit, Department of Agriculture, University of Naples Federico II, Portici, Naples, Italy
| | - Gianvito Lanave
- Department of Veterinary Medicine, University of Bari, Valenzano, Bari, Italy
| | - Luca Cistrone
- Forestry and Conservation, Cassino, Frosinone, Italy
| | - Annamaria Pratelli
- Department of Veterinary Medicine, University of Bari, Valenzano, Bari, Italy
| | - Vito Martella
- Department of Veterinary Medicine, University of Bari, Valenzano, Bari, Italy
| | - Giorgio Galiero
- Unit of Virology, Department of Animal Health, Istituto Zooprofilattico Sperimentale del Mezzogiorno, Portici, Naples, Italy
| | - Nicola Decaro
- Department of Veterinary Medicine, University of Bari, Valenzano, Bari, Italy
| | - Giovanna Fusco
- Unit of Virology, Department of Animal Health, Istituto Zooprofilattico Sperimentale del Mezzogiorno, Portici, Naples, Italy
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