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For: Qin Y, Hou J, Deng M, Liu Q, Wu C, Ji Y, He X. Bacterial abundance and diversity in pond water supplied with different feeds. Sci Rep 2016;6:35232. [PMID: 27759010 DOI: 10.1038/srep35232] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2016] [Accepted: 09/22/2016] [Indexed: 01/17/2023]  Open
Number Cited by Other Article(s)
1
Lalitha N, Katneni VK, Jangam AK, Suganya PN, Sukumaran S, Muralidhar M. Insight into the bacterial communities in the sediment-water interface across different salinities of Pacific White shrimp, Penaeus vannamei, by metabarcoding. Lett Appl Microbiol 2025;78:ovaf020. [PMID: 39929187 DOI: 10.1093/lambio/ovaf020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2024] [Revised: 01/01/2025] [Accepted: 02/09/2025] [Indexed: 02/26/2025]
2
Kim MK, Lim BS, Lee CS, Srinivasan S. Bacterial Diversity in the Different Ecological Niches Related to the Yonghwasil Pond (Republic of Korea). Microorganisms 2024;12:2547. [PMID: 39770750 PMCID: PMC11677111 DOI: 10.3390/microorganisms12122547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2024] [Revised: 11/23/2024] [Accepted: 11/28/2024] [Indexed: 01/11/2025]  Open
3
Singh AK, Abedin MM, Das S, Najar IN, Lepcha YD, Mishra PK, Amit A, Tiwari HK, Rai AK. Unraveling microbial landscapes: high-throughput amplicon sequencing reveals distinct bacterial communities and potential health risks in potable springs of the Indian Himalayas. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024:10.1007/s11356-024-35577-9. [PMID: 39570527 DOI: 10.1007/s11356-024-35577-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Accepted: 11/13/2024] [Indexed: 11/22/2024]
4
Hossein Najdegerami E, Manaffar R. Using a combination of phospholipid fatty acids profiles and DNA-based sequencing analyses to detect shifts in the biofloc microbial community in different carbon sources and carbon/nitrogen ratios. VETERINARY RESEARCH FORUM : AN INTERNATIONAL QUARTERLY JOURNAL 2024;15:425-434. [PMID: 39280855 PMCID: PMC11401133 DOI: 10.30466/vrf.2024.2015189.4060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/11/2023] [Accepted: 03/04/2024] [Indexed: 09/18/2024]
5
Raza B, Zheng Z, Zhu J, Yang W. A Review: Microbes and Their Effect on Growth Performance of Litopenaeus vannamei (White Leg Shrimps) during Culture in Biofloc Technology System. Microorganisms 2024;12:1013. [PMID: 38792842 PMCID: PMC11123971 DOI: 10.3390/microorganisms12051013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Revised: 05/08/2024] [Accepted: 05/13/2024] [Indexed: 05/26/2024]  Open
6
Hou Y, Yu Z, Jia R, Li B, Zhu J. Integrated rice-yellow catfish farming resulting in variations in the agricultural environment, rice growth performance, and soil bacterial communities. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024;31:28967-28981. [PMID: 38564129 DOI: 10.1007/s11356-024-33108-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2024] [Accepted: 03/23/2024] [Indexed: 04/04/2024]
7
Hou Y, Jia R, Sun W, Li B, Zhu J. Influences of the Integrated Rice-Crayfish Farming System with Different Stocking Densities on the Paddy Soil Microbiomes. Int J Mol Sci 2024;25:3786. [PMID: 38612595 PMCID: PMC11011395 DOI: 10.3390/ijms25073786] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2024] [Revised: 03/26/2024] [Accepted: 03/26/2024] [Indexed: 04/14/2024]  Open
8
Stocker MD, Smith JE, Pachepsky YA, Blaustein RA. Fine-scale spatiotemporal variations in bacterial community diversity in agricultural pond water. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;915:170143. [PMID: 38242477 DOI: 10.1016/j.scitotenv.2024.170143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2023] [Revised: 01/11/2024] [Accepted: 01/11/2024] [Indexed: 01/21/2024]
9
Miron RJ, Zhang Y. Understanding exosomes: Part 1-Characterization, quantification and isolation techniques. Periodontol 2000 2024;94:231-256. [PMID: 37740431 DOI: 10.1111/prd.12520] [Citation(s) in RCA: 24] [Impact Index Per Article: 24.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Revised: 07/21/2023] [Accepted: 07/25/2023] [Indexed: 09/24/2023]
10
Yoo SS, Lee DW, Ham HJ, Yeo IJ, Chang JY, Yun J, Son DJ, Han S, Hong JT. Presenilin-2 knock-In mice show severe depressive behavior via DVL3 downregulation. CNS Neurosci Ther 2024;30:e14370. [PMID: 37501340 PMCID: PMC10848049 DOI: 10.1111/cns.14370] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Revised: 11/07/2022] [Accepted: 06/17/2023] [Indexed: 07/29/2023]  Open
11
Exploring the Interspecific Interactions and the Metabolome of the Soil Isolate Hylemonella gracilis. mSystems 2023;8:e0057422. [PMID: 36537799 PMCID: PMC9948732 DOI: 10.1128/msystems.00574-22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]  Open
12
Zhang Y, Feng S, Gao F, Wen H, Zhu L, Li M, Xi Y, Xiang X. The Relationship between Brachionus calyciflorus-Associated Bacterial and Bacterioplankton Communities in a Subtropical Freshwater Lake. Animals (Basel) 2022;12:ani12223201. [PMID: 36428428 PMCID: PMC9686566 DOI: 10.3390/ani12223201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Revised: 11/12/2022] [Accepted: 11/16/2022] [Indexed: 11/22/2022]  Open
13
Bianco K, de Farias BO, Gonçalves-Brito AS, Alves do Nascimento AP, Magaldi M, Montenegro K, Flores C, Oliveira S, Monteiro MA, Spisso BF, Pereira MU, Ferreira RG, Albano RM, Cardoso AM, Clementino MM. Mobile resistome of microbial communities and antimicrobial residues from drinking water supply systems in Rio de Janeiro, Brazil. Sci Rep 2022;12:19050. [PMID: 36351942 PMCID: PMC9646821 DOI: 10.1038/s41598-022-21040-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Accepted: 09/22/2022] [Indexed: 11/10/2022]  Open
14
Spilsbury F, Foysal MJ, Tay A, Gagnon MM. Gut Microbiome as a Potential Biomarker in Fish: Dietary Exposure to Petroleum Hydrocarbons and Metals, Metabolic Functions and Cytokine Expression in Juvenile Lates calcarifer. Front Microbiol 2022;13:827371. [PMID: 35942316 PMCID: PMC9356228 DOI: 10.3389/fmicb.2022.827371] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2021] [Accepted: 06/13/2022] [Indexed: 11/23/2022]  Open
15
Functional and Seasonal Changes in the Structure of Microbiome Inhabiting Bottom Sediments of a Pond Intended for Ecological King Carp Farming. BIOLOGY 2022;11:biology11060913. [PMID: 35741434 PMCID: PMC9220171 DOI: 10.3390/biology11060913] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Revised: 06/09/2022] [Accepted: 06/13/2022] [Indexed: 11/17/2022]
16
Monitoring Bacterial Community Dynamics in Abalone (Haliotis discus hannai) and the Correlations Associated with Aquatic Diseases. WATER 2022. [DOI: 10.3390/w14111769] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
17
Wei YL, Long ZJ, Ren MX. Microbial community and functional prediction during the processing of salt production in a 1000-year-old marine solar saltern of South China. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022;819:152014. [PMID: 34852250 DOI: 10.1016/j.scitotenv.2021.152014] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Revised: 11/15/2021] [Accepted: 11/23/2021] [Indexed: 06/13/2023]
18
Basha AK, Kuttanapilly LV, Vaiyapuri M, Rathore G, Tripathi G, Prasad KP, Badireddy MR, Joseph TC. Microbial diversity and composition in acidic sediments of freshwater finfish culture ponds fed with two types of feed - A metagenomic approach. Lett Appl Microbiol 2022;75:171-181. [PMID: 35419857 DOI: 10.1111/lam.13720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Revised: 03/26/2022] [Accepted: 04/01/2022] [Indexed: 11/27/2022]
19
Hajiali F, Jin T, Yang G, Santos M, Lam E, Moores A. Mechanochemical Transformations of Biomass into Functional Materials. CHEMSUSCHEM 2022;15:e202102535. [PMID: 35137539 DOI: 10.1002/cssc.202102535] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Revised: 01/31/2022] [Indexed: 06/14/2023]
20
Shi J, Zhang B, Liu J, Fang Y, Wang A. Spatiotemporal dynamics in microbial communities mediating biogeochemical cycling of nutrients across the Xiaowan Reservoir in Lancang River. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022;813:151862. [PMID: 34826492 DOI: 10.1016/j.scitotenv.2021.151862] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Revised: 10/27/2021] [Accepted: 11/17/2021] [Indexed: 06/13/2023]
21
Kumar M, Gupta G, Varghese T, Srivastava PP, Gupta S. Preparation and characterization of glucose-conjugated super-paramagnetic iron oxide nanoparticles (G-SPIONs) for removal of Edwardsiella tarda and Aeromonas hydrophila from water. Microsc Res Tech 2022;85:1768-1783. [PMID: 35038205 DOI: 10.1002/jemt.24037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2021] [Revised: 12/10/2021] [Accepted: 12/13/2021] [Indexed: 11/09/2022]
22
Elsheshtawy A, Clokie BGJ, Albalat A, Beveridge A, Hamza A, Ibrahim A, MacKenzie S. Characterization of External Mucosal Microbiomes of Nile Tilapia and Grey Mullet Co-cultured in Semi-Intensive Pond Systems. Front Microbiol 2021;12:773860. [PMID: 34966368 PMCID: PMC8710667 DOI: 10.3389/fmicb.2021.773860] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2021] [Accepted: 11/10/2021] [Indexed: 11/13/2022]  Open
23
Li K, Zhao S, Guan W, Li KJ. Planktonic bacteria in white shrimp (Litopenaeus vannamei) and channel catfish (Letalurus punetaus) aquaculture ponds in a salt-alkaline region. Lett Appl Microbiol 2021;74:212-219. [PMID: 34778977 DOI: 10.1111/lam.13600] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2021] [Revised: 10/01/2021] [Accepted: 10/26/2021] [Indexed: 01/01/2023]
24
Lukassen MB, Menanteau-Ledouble S, de Jonge N, Schram E, Nielsen JL. Impact of water quality parameters on geosmin levels and geosmin producers in European recirculating aquaculture systems. J Appl Microbiol 2021;132:2475-2487. [PMID: 34773307 DOI: 10.1111/jam.15358] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Revised: 11/03/2021] [Accepted: 11/07/2021] [Indexed: 11/28/2022]
25
Nadella RK, Panda SK, Madhusudana Rao B, Pani Prasad K, Raman RP, Mothadaka MP. Antibiotic resistance of culturable heterotrophic bacteria isolated from shrimp (Penaeus vannamei) aquaculture ponds. MARINE POLLUTION BULLETIN 2021;172:112887. [PMID: 34450408 DOI: 10.1016/j.marpolbul.2021.112887] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Revised: 08/15/2021] [Accepted: 08/18/2021] [Indexed: 06/13/2023]
26
Biodiversity and Sediment Contamination in Wet Stormwater Ponds Depending on Design and Catchment Characteristics. SUSTAINABILITY 2021. [DOI: 10.3390/su132111809] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
27
Lv J, Yuan R, Wang S. Water diversion induces more changes in bacterial and archaeal communities of river sediments than seasonality. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021;293:112876. [PMID: 34098351 DOI: 10.1016/j.jenvman.2021.112876] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Revised: 05/01/2021] [Accepted: 05/21/2021] [Indexed: 06/12/2023]
28
Nguyen TTT, Foysal MJ, Fotedar R, Gupta SK, Siddik MAB, Tay CY. The Effect of Two Dietary Protein Sources on Water Quality and the Aquatic Microbial Communities in Marron (Cherax cainii) Culture. MICROBIAL ECOLOGY 2021;82:299-308. [PMID: 33432372 DOI: 10.1007/s00248-021-01681-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2020] [Accepted: 01/04/2021] [Indexed: 06/12/2023]
29
Zhou A, Xie S, Zhang Y, Chuan J, Tang H, Li X, Zhang L, Xu G, Zou J. Interaction of environmental eukaryotic microorganisms and fungi in the pond-cultured carps: new insights into the potential pathogenic fungi in the freshwater aquaculture. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021;28:38839-38854. [PMID: 33745047 DOI: 10.1007/s11356-021-13231-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2020] [Accepted: 02/26/2021] [Indexed: 06/12/2023]
30
Lastauskienė E, Valskys V, Stankevičiūtė J, Kalcienė V, Gėgžna V, Kavoliūnas J, Ružauskas M, Armalytė J. The Impact of Intensive Fish Farming on Pond Sediment Microbiome and Antibiotic Resistance Gene Composition. Front Vet Sci 2021;8:673756. [PMID: 34113676 PMCID: PMC8186532 DOI: 10.3389/fvets.2021.673756] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2021] [Accepted: 04/16/2021] [Indexed: 01/04/2023]  Open
31
Abate TA, Desta AF, Love NG. Evaluating tannery wastewater treatment performance based on physicochemical and microbiological characteristics: An Ethiopian case study. WATER ENVIRONMENT RESEARCH : A RESEARCH PUBLICATION OF THE WATER ENVIRONMENT FEDERATION 2021;93:658-669. [PMID: 32474980 PMCID: PMC8246915 DOI: 10.1002/wer.1364] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/06/2020] [Revised: 05/15/2020] [Accepted: 05/18/2020] [Indexed: 06/11/2023]
32
SYBR Green real-time qPCR method: Diagnose drowning more rapidly and accurately. Forensic Sci Int 2021;321:110720. [PMID: 33639416 DOI: 10.1016/j.forsciint.2021.110720] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2021] [Accepted: 02/06/2021] [Indexed: 12/17/2022]
33
Sabu EA, Gonsalves MJ, Sreepada RA, Shivaramu MS, Ramaiah N. Evaluation of the Physiological Bacterial Groups in a Tropical Biosecured, Zero-Exchange System Growing Whiteleg Shrimp, Litopenaeus vannamei. MICROBIAL ECOLOGY 2021;81:335-346. [PMID: 32880700 DOI: 10.1007/s00248-020-01575-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Accepted: 08/10/2020] [Indexed: 06/11/2023]
34
Huang Y, Miyamoto D, Hidaka M, Adachi T, Gu WL, Eguchi S. Regenerative medicine for the hepatobiliary system: A review. JOURNAL OF HEPATO-BILIARY-PANCREATIC SCIENCES 2020;28:913-930. [PMID: 33314713 DOI: 10.1002/jhbp.882] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2020] [Revised: 11/05/2020] [Accepted: 11/20/2020] [Indexed: 12/16/2022]
35
Chopyk J, Nasko DJ, Allard S, Bui A, Pop M, Mongodin EF, Sapkota AR. Seasonal dynamics in taxonomy and function within bacterial and viral metagenomic assemblages recovered from a freshwater agricultural pond. ENVIRONMENTAL MICROBIOME 2020;15:18. [PMID: 33902740 PMCID: PMC8067656 DOI: 10.1186/s40793-020-00365-8] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2020] [Accepted: 09/29/2020] [Indexed: 06/01/2023]
36
Malayil L, Ramachandran P, Chattopadhyay S, Cagle R, Hittle L, Ottesen A, Mongodin EF, Sapkota AR. Metabolically-active bacteria in reclaimed water and ponds revealed using bromodeoxyuridine DNA labeling coupled with 16S rRNA and shotgun sequencing. WATER RESEARCH 2020;184:116185. [PMID: 32726735 DOI: 10.1016/j.watres.2020.116185] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2020] [Revised: 07/09/2020] [Accepted: 07/13/2020] [Indexed: 06/11/2023]
37
Zou S, Gong L, Khan TA, Pan L, Yan L, Li D, Cao L, Li Y, Ding X, Yi G, Sun Y, Hu S, Xia L. Comparative analysis and gut bacterial community assemblages of grass carp and crucian carp in new lineages from the Dongting Lake area. Microbiologyopen 2020;9:e996. [PMID: 32175674 PMCID: PMC7221430 DOI: 10.1002/mbo3.996] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2019] [Revised: 12/31/2019] [Accepted: 12/31/2019] [Indexed: 12/17/2022]  Open
38
Manikkam R, Imchen M, Kaari M, Angamuthu V, Venugopal G, Thangavel S, Joseph J, Ramasamy B, Kumavath R. Metagenomic insights unveil the dominance of undescribed Actinobacteria in pond ecosystem of an Indian shrine. Meta Gene 2020. [DOI: 10.1016/j.mgene.2019.100639] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]  Open
39
Hou L, Mulla SI, Niño-Garcia JP, Ning D, Rashid A, Hu A, Yu CP. Deterministic and stochastic processes driving the shift in the prokaryotic community composition in wastewater treatment plants of a coastal Chinese city. Appl Microbiol Biotechnol 2019;103:9155-9168. [DOI: 10.1007/s00253-019-10177-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2019] [Revised: 08/12/2019] [Accepted: 10/07/2019] [Indexed: 12/20/2022]
40
Gao T, Cui B, Kong X, Bai Z, Zhuang X, Qian Z. Investigation of bacterial diversity and pathogen abundances in gibel carp (Carassius auratus gibelio) ponds during a cyprinid herpesvirus 2 outbreak. Microbiologyopen 2019;8:e907. [PMID: 31432609 PMCID: PMC6813457 DOI: 10.1002/mbo3.907] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2019] [Revised: 06/12/2019] [Accepted: 06/28/2019] [Indexed: 12/28/2022]  Open
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Daae HL, Heldal KK, Madsen AM, Olsen R, Skaugset NP, Graff P. Occupational exposure during treatment of offshore drilling waste and characterization of microbiological diversity. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019;681:533-540. [PMID: 31121403 DOI: 10.1016/j.scitotenv.2019.05.131] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2019] [Revised: 05/08/2019] [Accepted: 05/09/2019] [Indexed: 06/09/2023]
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Wu K, Zhao W, Wang Q, Yang X, Zhu L, Shen J, Cheng X, Wang J. The Relative Abundance of Benthic Bacterial Phyla Along a Water-Depth Gradient in a Plateau Lake: Physical, Chemical, and Biotic Drivers. Front Microbiol 2019;10:1521. [PMID: 31354648 PMCID: PMC6635551 DOI: 10.3389/fmicb.2019.01521] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Accepted: 06/18/2019] [Indexed: 02/01/2023]  Open
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The Role of Pseudomonas in Heterotrophic Nitrification: A Case Study on Shrimp Ponds (Litopenaeus vannamei) in Soc Trang Province. Microorganisms 2019;7:microorganisms7060155. [PMID: 31146455 PMCID: PMC6616971 DOI: 10.3390/microorganisms7060155] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2019] [Revised: 05/22/2019] [Accepted: 05/28/2019] [Indexed: 01/08/2023]  Open
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Foysal M, Fotedar R, Gupta S, Chaklader M. Biological ball filters regulate bacterial communities in marron ( Cherax cainii ) culture system. Lett Appl Microbiol 2019;68:455-463. [DOI: 10.1111/lam.13125] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2018] [Revised: 01/29/2019] [Accepted: 01/30/2019] [Indexed: 11/28/2022]
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Introduction to Genome Biology and Diversity. Methods Mol Biol 2019;1910:3-31. [PMID: 31278660 DOI: 10.1007/978-1-4939-9074-0_1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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Alfiansah YR, Hassenrück C, Kunzmann A, Taslihan A, Harder J, Gärdes A. Bacterial Abundance and Community Composition in Pond Water From Shrimp Aquaculture Systems With Different Stocking Densities. Front Microbiol 2018;9:2457. [PMID: 30405548 PMCID: PMC6200860 DOI: 10.3389/fmicb.2018.02457] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2018] [Accepted: 09/25/2018] [Indexed: 12/14/2022]  Open
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Huang F, Pan L, Song M, Tian C, Gao S. Microbiota assemblages of water, sediment, and intestine and their associations with environmental factors and shrimp physiological health. Appl Microbiol Biotechnol 2018;102:8585-8598. [PMID: 30039332 DOI: 10.1007/s00253-018-9229-5] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2018] [Revised: 07/04/2018] [Accepted: 07/05/2018] [Indexed: 12/14/2022]
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Truchado P, Gil MI, Suslow T, Allende A. Impact of chlorine dioxide disinfection of irrigation water on the epiphytic bacterial community of baby spinach and underlying soil. PLoS One 2018;13:e0199291. [PMID: 30020939 PMCID: PMC6051574 DOI: 10.1371/journal.pone.0199291] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2017] [Accepted: 06/05/2018] [Indexed: 12/13/2022]  Open
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Zhang H, Zhao Z, Chen S, Wang Y, Feng J, Jia J, Kang P, Li S. Geographical patterns of denitrifying bacterial communities associated with different urban lakes. RSC Adv 2018;8:17079-17090. [PMID: 35539271 PMCID: PMC9080392 DOI: 10.1039/c8ra01295d] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Accepted: 04/30/2018] [Indexed: 11/21/2022]  Open
50
Nakayama T, Tuyet Hoa TT, Harada K, Warisaya M, Asayama M, Hinenoya A, Lee JW, Phu TM, Ueda S, Sumimura Y, Hirata K, Phuong NT, Yamamoto Y. Water metagenomic analysis reveals low bacterial diversity and the presence of antimicrobial residues and resistance genes in a river containing wastewater from backyard aquacultures in the Mekong Delta, Vietnam. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2017;222:294-306. [PMID: 28062224 DOI: 10.1016/j.envpol.2016.12.041] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2016] [Revised: 12/12/2016] [Accepted: 12/17/2016] [Indexed: 06/06/2023]
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