Plant sugars are crucial players in the oxidative challenge during abiotic stress: extending the traditional concept

Phthalate esters decreased nutritional value of rice grains via redirecting glycolytic carbon flow from grain quality formation toward antioxidative defense

The prevalence and persistence of phthalate esters (PAEs) in agricultural soils has garnered global attention. Assessing their potential impacts on crop yield and quality necessitates a thorough understanding of their risks. In this study, we elucidated the carbon flow-dependent mechanisms of the decreased grain quality upon exposure to PAEs through a soil-based rice cultivation experiment. Combining metabolomics and transcriptomics methods, our findings revealed that the glycolytic intermediates derived from sucrose breakdown preferentially flowed towards amino acid synthesis, rather than starch and fatty acid synthesis under exposure to dibutyl phthalate (DBP) or di(2-ethylhexyl) phthalate (DEHP). This redirection led to decreased levels of starch (by 14-23 %) and fatty acids (by 10-40 %) in the grains. Notably, the increased amino acids primarily served as antioxidants to mitigate DBP and DEHP stresses, rather than enhancing protein quality. Consequently, a reduction in protein levels by 5.7-38 % was observed. Moreover, our study pinpointed glucose-6-phosphate, a common precursor for amino acids, fatty acids, and starch synthesis, as the crucial branching node in glycolysis that redirected this carbon flow. This study offers a new perspective for evaluating the ecological risks associated with PAEs, paving the way for future research and interventions to mitigate their adverse effects on crops.

Sorghum-peanut intercropping under salt stress mediates rhizosphere microbial community shaping in sorghum by affecting soil sugar metabolism pathways

Soil salinization is a substantial impediment to agricultural production, and investigating sustainable mitigation measures is essential for addressing food security. We conducted a two-year pot experiment to investigate the shaping mechanism of sorghum rhizosphere microbial community in sorghum-peanut intercropping system under salt stress. The experiment comprised four treatments: sole-cropped sorghum under normal soil conditions (NSS), intercropped sorghum under normal soil conditions (NIS), sole-cropped sorghum under salt-stress conditions (SSS), and intercropped sorghum under salt-stress conditions (SIS). The sorghum rhizosphere soil metabolites were examined using GC-MS, and the rhizosphere microbial community was characterized through metabolome sequencing. We identified 123 metabolites across treatments, with significant differences between normal and salt-stress soil conditions. The major metabolite classes included carbohydrates, alcohols, and acids. Key carbohydrates, including fructose and sucrose, were significantly reduced in the SIS than in SSS, NSS, and NIS treatments. Metabolic pathway analyses revealed that these differences were primarily associated with "Fructose and mannose metabolism," "Starch and sucrose metabolism" and "ABC transporter." Metabolome analyses revealed significant differences in microbial community structure across diverse soil conditions and cropping patterns. At phylum level, Proteobacteria, Gemmatimonadetes, and Verrucomicrobia predominated, with their relative abundance experiencing substantial changes under salt stress. SIS facilitated the enrichment of specific genera (Rhodanobacter), which were associated with soil health and stress tolerance. Additionally, the responses of rare microbial taxa to salt stress and intercropping varied, with specific rare microbial taxa (Rhizopus) exhibiting relative abundance under salt stress. Correlation analysis of metabolites and microbial taxa revealed that certain carbohydrates were significantly positively correlated with specific microbial phyla (Cyanobacteria and Nitrospirae) while demonstrating a significant negative correlation with Planctomycetota and Bacteroidota. These correlations indicate that sorghum intercropped with peanuts can promote the enrichment of microbial taxa under salt stress, thereby enhancing soil metabolic functions and stress tolerance by optimizing the rhizosphere microbial community. This study reveals the mechanism through which sorghum-peanut intercropping under salt stress influences the composition of sorghum's rhizosphere microbial community by modulating soil sugar metabolism pathways. This finding provides a new perspective on sustainable agricultural practices in saline soils and emphasizes the pivotal role of plant-metabolite-microbe interactions in abiotic stress mitigation.

Soluble sugars maintain redox homeostasis and accelerate the growth of cultured Malva neglecta cells under 2D-clinorotation

In addition to their nutritional role, carbohydrates play essential roles in metabolism, growth, development, and response to the environment. In the present study, the effects of clinorotation on structural and soluble sugar metabolism and the redox system were investigated in cultured Malva neglecta cells. A rapidly growing cell line was established from leaf explants of M. neglecta on a solidified LS medium, and the cells were exposed to 2D-clinostat for 7 days. Clinorotation significantly increased monosaccharide content, including glucose, fructose, rhamnose, mannose, and xylose, while reducing sucrose levels compared to control groups. The activities of pectin methylesterase (PME) and β-1, 3-glucanase increased, whereas those of covalently wall-bound peroxidase (CPO) and polyphenol oxidase (PPO) decreased. This reduction, along with a decrease in callose, cellulose, and phenolic acid content, likely accelerated cell growth by reducing cell wall crosslinking and stiffness. The content of reactive oxygen/nitrogen species i.e., hydrogen peroxide (H2O2), hydroxyl radical (.OH), and nitric oxide (NO) radicals significantly decreased in response to clinorotation compared with 1g-grown cells. Hierarchical cluster analysis revealed a strong negative correlation between NO and catalase (CAT) activity. The observed decrease in these oxidants can be attributed, at least in part, to the increased content of soluble sugars through the oxidative pentose-phosphate pathway or tricarboxylic acid cycle (TCA), and more significantly, to the enhancement of catalase activity and flavonoid content.

Integrated metabolomic and transcriptomic analyses revealed the overlapping response mechanisms of banana to cold and drought stress

Banana (Musa spp.), a vital tropical fruit and food crop, faces significant challenges from cold and drought stress, which threaten its productivity. Uncovering the overlapping mechanisms of crop responses to abiotic stresses is essential for the development of multi-resistant crop varieties. This study investigates the overlapping response mechanisms of banana to cold and drought stress through integrated metabolomic and transcriptomic analyses. We conducted physiological assessments alongside these analyses to elucidate shared mechanisms. Our results showed that both cold and drought stress disrupted cell membrane stability and reduced relative water content and chlorophyll content in banana leaves. Metabolomic analysis identified 1800 annotated metabolites, with 636 and 405 differentially accumulated metabolites (DAMs) under cold and drought stress, respectively, and flavonoids represented the most abundant metabolite class. Transcriptomic analysis revealed that 5687 differentially expressed genes (DEGs) were induced under both stress conditions, with significant enrichment in pathways related to ascorbic acid, arginine, and proline metabolism. Integrating metabolomic and transcriptomic data highlighted carbohydrate, amino acid, and flavonoid metabolism as the central pathways shared in response to cold and drought stresses. Notably, while these pathways were common, specific structural genes and accumulated metabolites varied between stress types. Additionally, our results suggest that GDP-mannose is the primary ascorbate synthesis route under cold stress, whereas myo-inositol and galacturonic acid pathways dominate under drought stress. These findings enhance our understanding of banana's adaptive responses and provide a foundation for breeding multi-stress-resistant crop varieties in an era of climate change.

The Vacuolar Inositol Transporter BvINT1;1 Contributes to Raffinose Biosynthesis and Reactive Oxygen Species Scavenging During Cold Stress in Sugar Beet

Despite a high sucrose accumulation in its taproot vacuoles, sugar beet (Beta vulgaris subsp. vulgaris) is sensitive to freezing. Earlier, a taproot-specific accumulation of raffinose was shown to have beneficial effects on the freezing tolerance of the plant. However, synthesis of raffinose and other oligosaccharides of the raffinose family depends on the availability of myo-inositol. Since inositol and inositol-metabolising enzymes reside in different organelles, functional inositol metabolism and raffinose synthesis depend on inositol transporters. We identified five homologues of putative inositol transporters in the sugar beet genome, two of which, BvINT1;1 and BvINT1;2, are localised at the tonoplast. Among these, only the transcript of BvINT1;1 is highly upregulated in sugar beet taproots under cold. BvINT1;1 exhibits a high transport specificity for inositol and sugar beet mutants lacking functional BvINT1;1 contain increased inositol levels, likely accumulating in the vacuole, and decreased raffinose contents under cold treatment. Due to the quenching capacity of raffinose for Reactive Oxygen Species (ROS), which accumulate under cold stress, bvint1;1 sugar beet plants show increased expression of both, ROS marker genes and detoxifying enzymes. Based on these findings, we conclude that the vacuolar inositol transporter BvINT1;1 is contributing to ROS-homoeostasis in the cold metabolism of sugar beet.

Quantifying redox signalling regulatory transcriptional dynamics in Nardostachys jatamansi under abiotic stress response

Understanding the responses of Himalayan medicinal plants to multifactorial stresses is crucial in the face of increasing environmental challenges, primarily characterised by frequent temperature and water availability fluctuations. The present study investigates the physiological, biochemical, and transcript variations in the critically endangered Himalayan medicinal plant Nardostachys jatamansi subjected to cold (15 °C and 10 °C for 30 days), drought (6 % PEG for 30 days), and heat stress (30 °C for 24 h). The primary impact of stress was observed through reduced plant biomass and chlorophyll fluorescence. The effects of abiotic stresses were also evident in the modulation of electrolyte leakage, MDA content and H2O2 accumulation. Accumulation of reactive oxygen species was confirmed through DAB and NBT staining, alongside increased DPPH and ABTS radical scavenging activity. Differential expression profiling of the RBOH family transcripts further substantiated the production of ROS. Enhanced enzymatic and non-enzymatic activities were observed under each abiotic stress condition. Additionally, genes specific to the regulatory mevalonate (MVA) pathway (TPS9; HMGR) and the methylerythritol phosphate (MEP) pathway (DXS1; DXR) were found to be differentially regulated. Moreover, differential expression profiling of abiotic stress signalling regulatory transcripts CRLK1, CRLK2, CaM6 and ICE1 was also discovered. These findings provide valuable insights into the physiological and biochemical profiling of N. jatamansi in response to extreme environmental conditions, significantly aiding our understanding of the adaptation strategies of alpine vegetation for their conservation.

Seasonal dynamics of non-structural carbohydrates in new twigs and old branches of Vitex negundo Var. heterophylla under three densities of Robinia pseudoacacia forests

Non-structural carbohydrates (NSCs) are vital for plant growth, with their levels influenced by light intensity and seasonal changes. However, research on how varying light conditions due to forest density and seasons affect carbon allocation in new twigs and old branches is scarce. Vitex negundo var. heterophylla is a leading shrub species in the warm temperate zone's shrub layer. In this study, we conducted a detailed sampling of V. negundo var. heterophylla branches, differentiating new twigs and old branches across phenological stages under three densities of Robinia pseudoacacia forests. Our sampling schedule was as follows: March (dormant period), May (sprouting period), July (leaf spreading period), September (flowering and fruiting period), and December (deciduous period). The results showed that the seasonal patterns of carbon allocation in the new twigs and old branches were largely in harmony. The starch concentration in the old branches under the high density was significantly lower than in the other two densities during the growing season, but the NSC concentration in December remained at a high level and did not significantly decrease. These indicated even though the light environment was unfavorable to understory V. negundo var. heterophylla during the growing season, cold tolerance in December was not inhibited. And the concentrations of soluble sugars and starch in the new twigs were typically higher than those found in the old branches. This dynamic suggests a strategic prioritization of resources to fuel the growth and development of the plant during the current year. Findings from this study not only contribute to our understanding of carbon allocation strategies in V. negundo var. heterophylla but also provide critical insights for managing and predicting the resilience of warm temperate shrub ecosystems to environmental change.

Growth-defence carbon allocation is complementary for enhanced crop yield under drought and heat stress in tolerant chickpea genotypes

Non-structural carbohydrates (NSC) are major substrates for primary and secondary plant metabolism with various functions including growth, storage of carbon (C) and energy, osmotic adjustment and synthesis of antioxidants for defence against biotic and abiotic stresses. The allocation of C to growth and defence molecules is labelled antagonistic because it is perceived that limited photosynthates produced under stress is allocated preferentially to defence molecules at the expense of growth, leading to the development of the growth-defence trade-off concept. Several studies and literature reviews have provided evidence both in support and against the growth-defence trade-off. Therefore, it remains unclear whether the allocation of NSC to storage and defence molecules is at the expense of plant growth, especially in annual or short-lived flowering plants. This article reviews literature on sugar and antioxidant metabolism in tolerant/desi and sensitive/kabuli genotypes of chickpea under drought and heat stress conditions. The results show that some of the desi genotypes and drought and heat stress tolerant genotypes accumulated greater NSC, proline or antioxidant enzymes and produced higher biomass and seed yield than kabuli and sensitive genotypes under stress. This is new evidence to support the view that plants accumulate NSC and secondary metabolites and grow at the same time under drought and heat stress conditions which implies complementary allocation of C to growth and defence metabolism. Understanding the growth-defence trade-off and its application is important as it affects plant growth, seed yield, and plant fitness in both natural ecosystems and crop improvement programmes in agriculture.

Effect of antibiotics on diverse aquatic plants in aquatic ecosystems

The widespread presence of antibiotics in aquatic ecosystems, mainly due to their use in medicine and veterinary practices, poses a significant environmental challenge. Aquatic plants play a vital role in maintaining ecosystem stability, but their responses to antibiotics vary by species, influenced by differences in their traits and interactions with environmental factors. However, the specific ways antibiotics affect these plants remain poorly understood. In this study, we conducted a meta-analysis of 167 peer-reviewed studies to investigate the mechanisms of antibiotic uptake and their effects on different types of aquatic plants-submerged, emergent, and floating. Our analysis shows that antibiotics, particularly common ones like sulfonamides, tetracyclines, and quinolones, impact aquatic plants through multiple pathways. Submerged and floating plants often face widespread, direct exposure, resulting in "full-coverage" impacts, while emergent plants experience mixed exposure patterns, affecting both submerged and aerial parts and leading to "partial-coverage" impacts. These findings provide a foundation for phytoremediation strategies, enabling the rational selection and management of aquatic plant types to mitigate antibiotic pollution. Our study underscores the ecological risks posed by antibiotic contamination in aquatic ecosystems and offers a theoretical framework for developing effective restoration strategies.

VaWRKY65 contributes to cold tolerance through dual regulation of soluble sugar accumulation and reactive oxygen species scavenging in Vitis amurensis

Although the significance of some plant WRKYs in response to cold stress have been identified, the molecular mechanisms of most WRKYs remain unclear in grapevine. In this study, we demonstrate that cold-induced expression of VaBAM3 in Vitis amurensis executes a beneficial role in enhancing resistance by the regulating starch decomposition. VaWRKY65 was identified as an upstream transcriptional activator of VaBAM3 through yeast one-hybrid library screening and validated to directly interact with the W-box region inside the VaBAM3 promoter. Transgenic Arabidopsis thaliana plants and grapevine roots overexpression VaWRKY65 exhibited improved cold tolerance along with higher BAM activity and soluble sugar levels, whereas opposite changes were observed in VaWRKY65 knockdown lines created by virus-induced gene silencing (VIGS) in grapevine plants and in the knockout wrky65 mutants generated by CRISPR/Cas9 technology in grapevine roots. The transcriptome data show that overexpression of VaWRKY65 led to significant alteration of a diverse set of stress-related genes at the transcriptional level. One of the genes, Peroxidase 36 (VaPOD36), was further verified as a direct target of VaWRKY65. Consistently, VaWRKY65-overexpressing plants had higher VaPOD36 transcript levels and POD activity but a reduced ROS level, while silencing VaWRKY65 results in contrary changes. Collectively, these results reveal that VaWRKY65 enhanced cold tolerance through modulating soluble sugars produced from starch breakdown and ROS scavenging.

Sex and salt stress response - physiological and biochemical aspects of hydroponic culture of dioecious Rumex thyrsiflorus Fingerh

This study investigates the sex-specific physiological and biochemical responses to salt stress in male and female Rumex thyrsiflorus plants under hydroponic culture conditions. In vitro regenerated plants were exposed to different sodium chloride (NaCl) concentrations (0, 43, and 86 mM), and the resulting changes in morphology, photosynthetic performance, and biochemical profiles were analyzed. Salt stress resulted in significant morphological adaptations, including reduced leaf area and closed stomata, particularly in the male plants, indicating adaptive strategies to minimize water loss and ion toxicity. Photosynthetic efficiency, especially the photochemical performance of photosystem II, decreased under elevated NaCl levels, with a marked reduction observed at 86 mM. Biochemical analyses revealed remarkable responses, including increased enzymatic antioxidant activities and the accumulation of free proline, a known compatible osmolyte, as well as branched-chain amino acids, soluble proteins, and carbohydrates. These shifts in metabolite profiles varied by sex, with male plants showing a greater increase in compounds such as proline, γ-aminobutyric acid, methionine, and the osmoprotectant sucrose, highlighting sex-specific patterns of metabolic adaptation. Females showed higher chlorophyll retention and greater resistance to oxidative damage, suggesting a range of different adaptive strategies. The study highlights the importance of identifying sex-specific stress responses in R. thyrsiflorus, which has implications for breeding programmes aiming to improve crop resilience. These results expand our understanding of plant stress biology and provide valuable insights for further research into how dioecious plants respond to environmental challenges.

Plastid- and photoreceptor-dependent signaling is required for the response to photoperiod stress

Prolongation of the light period causes photoperiod stress in plants. The response to photoperiod stress includes the induction of a distinct set of stress marker genes, of reactive oxygen species (ROS), and of stress hormones. In this study, the impact of light intensity and light quality on the photoperiod stress response was investigated. A threshold light intensity of circa 50 μmol m-2 s-1 is necessary for inducing photoperiod stress, indicating the involvement of chloroplasts. Lower photoperiod stress symptoms in retrograde signaling mutants (gun4, gun5) and mutants with constrained plastid function (glk1 glk2) corroborated the role of chloroplasts. Genetic analysis revealed that the photoreceptors phyB and particularly CRY2 are important to perceive photoperiod stress. Overall, these results showed that both plastid-dependent and photoreceptor-dependent signaling pathways are involved in sensing the light conditions causing photoperiod stress and governing the response to it.

Nanoparticle-Elicited Eustress Intensifies Cucumber Plant Adaptation to Water Deficit

Under changing climates, engineering drought-resistant crops is critical for reducing food insecurity. Here, we leverage plant "stress memory" and ROS-generating silica nanoparticles (NPs) to enhance the drought tolerance of cucumber plants. Under PEG-mimicking drought conditions, cucumber seeds primed with fumed silica NPs (40 mg/L, 4 h) exhibited an increased seed germination rate (from 66.7 to 80.0%), enhanced seedling vigor (59.3%), and improved root and shoot length (24.4 and 74.1%, respectively) compared to seeds primed with water. In contrast, silicic acid and traditional silicon fertilizers at the same dose did not show priming effects, indicating that the released Si did not contribute to the observed outcomes. Metabolomics reveals that silica seed priming accelerated the mobilization of seed-stored reserves. Vegetative tissues also exhibit enhanced drought resistance, and metabolomics analysis reveals that the drought resistance strategy involves the upregulation of sugars (glucose, sucrose, trehalose, maltose; 34.7-74.8%), amino acids (methionine, 6-fold), signaling molecules (salicylic acid, 2.5-fold), and antioxidants (ascorbic acid, 2-hydroxycinnamic acid, ferulic acid, P-coumaric acid; 16.0-83.8%). Transcriptomics analysis reveals that several drought- and even desiccation-tolerant associated genes exert more pronounced transcript changes in silica-primed leaves. The life cycle study shows that silica seed priming does not generate any yield penalty or compromise the nutritional quality of the fruits. Importantly, offspring seeds exhibit enhanced vigor and drought tolerance, indicating the transgenerational transmission of the acquired drought resilience. The findings of this study provide a promising approach for engineering crops that are resilient to climate change.

The Impact of Temperature on the Leaves of Ceratonia siliqua L.: Anatomical Aspect, Secondary Metabolite Analysis, and Antimicrobial Activity of the Extracts

Ceratonia siliqua L. (Fabaceae) is an evergreen sclerophyllous species that successfully overcomes the challenges of the Mediterranean climate. Commonly, biosynthesis of secondary metabolites is a major reaction of the plants thriving in the Mediterranean formations against temperature stress. Due to concerns about the climate crisis, we studied the impact of 6-day low (5 °C) and high (40 °C) temperature stress on young carob seedlings. In stressed plants, mainly the heat-treated, the leaves appear xeromorphic. Parameters of the physiology of the plants such as chlorophyll-a and -b, total phenolic content, and oxidative stress were measured and presented via Principal Component Analysis. Chlorophyll-a and -b contents are inferior in cold-stressed leaves while heat-stressed leaves accumulate more phenolics and experience higher oxidative stress as compared to their cold-stressed counterparts. The phytochemical profile of different extracts obtained from stressed carob leaves was identified so as to gain insight into metabolites produced under stress. Moreover, LC-HRMS/MS metabolomic workflow was utilized for the discovery of biomarkers, over- or under-regulated in stressed conditions. The antimicrobial activity of carob leaf extract fractions was assessed against six human pathogen strains and three phytopathogen bacterial strains. MeOH-H2O and dichloromethane (DCM) extracts presented notable activity against Candida albicans and Saccharomyces cerevisiae, while DCM extracts inhibited the growth of Erwinia amylovora. We may conclude that carob tree exposure to temperature stress does not have a significant influence on secondary metabolic pathways.

Iron oxide nanoparticles enhance alkaline stress resilience in bell pepper by modulating photosynthetic capacity, membrane integrity, carbohydrate metabolism, and cellular antioxidant defense

Bell pepper (Capsicum annuum L.) is a commercially important and nutritionally rich vegetable crop in the Solanaceae family. Alkaline stress (AS) can disrupt growth, metabolism, and, particularly, nutritional quality. This study aims to evaluate the role of iron oxide nanoparticles (FeNP) in mitigating AS and enhancing plant growth and metabolic functions by conducting experiments under controlled greenhouse conditions with four main treatments: AS (irrigating plants with alkaline salts mixture solution); FeNP (foliar application of Fe3O4 nanoparticles at 100 mg L-¹); AS + FeNP (integrated treatment of AS and FeNP); and CK (control). The results clearly demonstrated that the AS treatment negatively affects plant biomass, photosynthetic attributes, membrane integrity, carbohydrate metabolism, and the balance of the antioxidant system. Additionally, key phenolic and flavonoid compounds decreased under the AS, indicating a detrimental effect on the plant's secondary metabolites. In contrast, the application of FeNP under the AS not only improved growth and photosynthetic attributes but also enhanced membrane integrity and restored antioxidant balance. This restoration was driven by the accumulation of sugars (glucose, fructose, sucrose) and starch, along with key carbohydrate metabolism enzymes-sucrose phosphate synthase (SPS), sucrose synthase (SuSy), neutral invertase (NI), and vacuolar invertase (VI)-and their associated gene expression. The correlation analysis further revealed a tight regulation of carbohydrate metabolism at both enzymatic and transcript levels in all tissue types, except for SPS in the roots. Furthermore, the AS + FeNP treatment resulted in increased levels of key phenolics (dihydrocapsaicin, capsaicin, p-coumaric acid, sinapic acid, p-OH benzoic acid, p-OH benzaldehyde, and ferulic acid) and flavonoid compounds (dihydroquercetin, naringenin, kaempferol, dihydrokaempferol, and quercetin) compared to the AS treatment, thus suggesting that these secondary metabolites likely contribute to the stabilization of cellular structures and membranes, ultimately supporting improved physiological functions and resilience under stress. In conclusion, the application of FeNP demonstrate potential in enhancing the resilience of bell pepper plants against the AS by improving growth, carbohydrate metabolism, and the levels of secondary metabolites.

Host plants selection of Centranthera grandiflora Benth. and nontargeted metabolomics analysis of its parasitic and non-parasitic samples

According to the previous investigation and research of our group, it was found that Centranthera grandiflora Benth. (C. grandiflora for short) might be a root hemiparasitic plant. The experiments of mixed sowing of C. grandiflora and 9 companion plants that might be hosts were conducted, and the growth, biological yield and other indexes were observed. The results showed that Cyperus iria L. was the best host for C. grandiflora, and when they were mixed sowed, C. grandiflora had a vigorous growth above ground and the haustoria connected obviously below ground, while C. grandiflora could achieve blossoming and fruiting in the same year. Next, nontargeted metabonomics analysis methods were utilized to clarify the differences in metabolites between parasitized and non-parasitized C. grandiflora. A total of 82 metabolites with significant differences were screened. The main upregulated differential metabolites of non-parasitized plants were for plant growth, while that of parasitized plants were functional compounds such as EPA. Out of 82 differential metabolites, 32 were annotated into 37 KEGG pathways. Analysis of the 37 pathways in combination with the differential metabolites showed that in addition to being involved in the synthesis pathway of iridoid terpenes, the up-regulated metabolites of parasitized plants were involved in the synthesis pathways of several functional components, while that of non-parasitic plants were involved in the subsequent catabolism of monoterpenoid compounds, as well as the metabolic pathways of nutrients synthesis and catabolism, energy generation, and phytohormone production required for plant growth.

Biomass-based carbon dot-modified cerium oxide nanoparticles (BCDs@CeO2) efficiently promote Myriophyllum aquaticum to remove NH4+-N and TP in eutrophic water

Aquatic plants are widely used for eutrophication remediation. However, strong abiotic plant stress often limits their remediation efficiency. This study proposed biomass-based carbon dot-modified cerium oxide nanoparticles (BCDs@CeO2) with good biocompatibility to mitigate abiotic plant stress. The BCDs@CeO2 pretreated Myriophyllum aquaticum exhibited enhanced removal rates of NH4+-N and TP, with the 10 mg/L BCDs@CeO2 treatment showing increases of 39.23 % and 29.11 %, respectively, compared to the pure water-precultured plant system (p < 0.05). Plant physiological changes and transcriptomic analysis revealed that BCDs@CeO2 treatment upregulated glycolysis/gluconeogenesis and α-linolenic acid metabolism pathways in rhizomes, inducing increased ATP synthase and antioxidant enzyme (Peroxidase, Catalase, and Superoxide Dismutase) activities, and enhancing amino acid metabolism, which further boosted Glutamine Synthetase activity and promoted NH4+-N and TP absorption and utilization. ICP-MS and microscopic analysis confirmed the uptake and migration of BCDs@CeO2 in plants. In summary, this study provides an effective strategy to enhance eutrophication phytoremediation.

Solid-state fermentation of green waste for the production of biostimulants to enhance lettuce (Lactuca sativa L.) cultivation under water stress: Closing the organic waste cycle

Food production faces important challenges such as water scarcity and the overall need of novel sustainable strategies. This study assesses the effect of the biostimulant produced through solid-state fermentation (SSF) of green waste (wood chips and grass residues) inoculated with Trichoderma harzianum with and without l-tryptophan as a precursor for indole-3-acetic acid (IAA) production, a well-known plant hormone. The fermented solid demonstrated significant positive effects on the growth of lettuce (Lactuca sativa L.) under different irrigation conditions. Substantial enhancements were observed in growth parameters such as fresh weight, plant height, leaf area and leaf quantity, along with chemical parameters including total phenol content, chlorophylls, carotenoids, and antioxidant activity (DPPH). The results also showed a positive impact on the nutritional quality of lettuce, particularly under normal irrigation conditions. In conclusion, this study highlights the biostimulant potential to improve the yield and nutritional quality of lettuce crops by reusing plant residues. Additionally, it poses the relevance of applying circular economy principles in sustainable agriculture and organic waste management.

Prohexadione-Calcium Reduced Stem and Tiller Damage and Maintained Yield by Improving the Photosynthetic and Antioxidant Capacity of Rice (Oryza sativa L.) Under NaCl Stress

Salt stress is a vital environmental stress that severely limits plant growth and productivity. Prohexadione-calcium (Pro-Ca) has been extensively studied to regulate plant growth, development, and stress responses. However, the constructive role of Pro-Ca in alleviating damages and enhancing rice tillers' morph-physiological characteristics under salt stress remains largely unknown. The results showed that Pro-Ca significantly improved Changmaogu's (CMG's) productive tillering rate and the total yield per plant by 17.1% and 59.4%, respectively. At tillering stage, the results showed that Pro-Ca significantly improved the morph-physiological traits, i.e., leaf area, and photosynthetic traits of the rice variety with salt tolerance, under NaCl stress. Pro-Ca significantly increased the seedling index of the main stem and tiller by 10.3% and 20.0%, respectively. Pro-Ca significantly increased the chlorophyll a (chl a), chlorophyll b (chl b) and carotenoid contents by 32.8%, 58.4%, and 33.2%, respectively under NaCl stress. Moreover, Pro-Ca significantly enhanced the net photosynthetic rate (A) by 25.0% and the non-photochemical (NPQ) by 9.0% under NaCl stress. Furthermore, the application of Pro-Ca increased the activities of antioxidant enzymes by 7.5% and 14.7% in superoxide dismutase (SOD), 6.76% and 18.0% in peroxidase (POD), 26.4% and 58.5% in catalase (CAT), 11.0% and 15.9% in ascorbate peroxidase (APX), and Pro-Ca reduced the membrane damage index by 10.8% and 2.19% in malondialdehyde (MDA) content, respectively, for main stem and tiller leaves under NaCl stress. Pro-Ca significantly enhanced the soluble protein content of the main stem and tiller leaves by 2.60% and 6.08%, respectively. The current findings strongly suggested that exogenous application of Pro-Ca effectively alleviated the adverse impact of NaCl stress on the main stem and tillers by enhancing the photosynthetic capacity and antioxidant enzyme activity, and ultimately increased the productive tillering rate and grain yield.

Two critical membranes: how does the chloroplast envelope affect plant acclimation properties?

Chloroplasts play a pivotal role in the metabolism of leaf mesophyll cells, functioning as a cellular hub that orchestrates molecular reactions in response to environmental stimuli. These organelles contain complex protein machinery for energy conversion and are indispensable for essential metabolic pathways. Proteins located within the chloroplast envelope membranes facilitate bidirectional communication with the cell and connect essential pathways, thereby influencing acclimation processes to challenging environmental conditions such as temperature fluctuations and light intensity changes. Despite their importance, a comprehensive overview of the impact of envelope-located proteins during acclimation to environmental changes is lacking. Understanding the role of these proteins in acclimation processes could provide insights into enhancing stress tolerance under increasingly challenging environments. This review highlights the significance of envelope-located proteins in plant acclimation.

GRAIN SIZE ON CHROMOSOME 2 orchestrates phytohormone, sugar signaling and energy metabolism to confer thermal resistance in rice

GRAIN SIZE ON CHROMOSOME 2 (GS2) has been reported to enhance rice grain yield and confer tolerance to cold, drought, and salt stress, but its function in heat tolerance of rice remains undocumented. This study aimed to investigate whether GS2 could enhance thermal tolerance by subjecting rice seedlings of Huazhan (HZ) and its near-isogenic line (HZ-GS2) to heat stress. HZ-GS2 plants exhibited less damage compared to HZ plants under heat stress. Transcriptome revealed the involvement of phytohormones, sugar signaling, and energy metabolism in the mechanism by which GS2 influences heat tolerance. Under heat stress, HZ-GS2 plants showed higher increases or lower decreases in glucose, gibberellins (GAs), salicylic acid (SA), indoleacetic acid (IAA), adenosine triphosphate (ATP), energy charge, as well as the activities of hexokinase, NADH dehydrogenase, cytochrome oxidase, ATP synthase, and ATPase. Exogenous GA3 enhanced heat tolerance in rice by increasing energy charge, ATPase, activities of complex V and hexokinase. Additionally, glucose, sucrose, 3-aminobenzamide (3-ab), and Na2SO3 conferred heat tolerance in rice plants. Importantly, a significant increase in Fv/Fm was observed in plants treated with a combination of GA3, glucose, and 3-ab, compared to those sprayed alone. Thus, GS2 coordinates GA3, hexokinase, and energy metabolism to improve energy status, thereby enhancing heat tolerance in rice plants.

Ontogenetic differences in sun and shade galls of Clinodiplosis profusa on Eugenia uniflora leaves and the cytological antioxidant mechanisms in gall cells

The gall-host Eugenia uniflora (Myrtaceae) is adaptable to different light conditions, enabling leaf production and survival in both sun and shade. Leaves of E. uniflora in shaded environments have more mesophyll layers, and galls of Clinodiplosis profusa (Cecidomyiidae) are larger and wider. Based on these previous observations, this study investigated the morphogenesis of galls induced by C. profusa on leaves of E. uniflora in different light conditions, revealing if the galls have a potential for acclimation, as observed with leaves. For this purpose, we compared the anatomical, histometric, and histochemical development of leaves and galls at different stages of development in sun and shade environments. Additionally, we analyzed the cytological features of the tissues composing the mature gall walls. Cells of shade galls expanded more toward the end of the developmental phase, which may explain the larger volume found for shade galls in a previous study. However, during the mature phase, these galls showed no significant differences in tissue thickness and final cell elongation in the contrasting light conditions. In the ultrastructural analyses, mature galls showed a gradient distinguishing the outer and inner parenchyma cells. The inner parenchyma had nutritive cells, with dense cytoplasm and abundant organelles. A higher accumulation of starch grains in nutritive cells, with evidence of hydrolysis of starch grains detected in the innermost layers leads to the accumulation of reducing sugars, which, with the presence of plastoglobules and protein bodies, are important mechanisms of oxidative stress dissipation in the cells in contact with the gall inducer.

LED light improves shoot multiplication, steviol glycosides and phenolic compounds biosynthesis in Stevia rebaudiana Bertoni in vitro culture

Light-emitting diode (LED) lamps are efficient elicitors of secondary metabolites. To investigate the influence of LED light on steviol glycosides (SGs) and phenolic compounds biosynthesis, stevia shoots were cultured under the following LED lights: white-WL, blue-B, red-R, 70% red and 30% blue-RB, 50% UV, 35% red and 15% blue-RBUV, 50% green, 35% red and 15% blue-RBG, 50% yellow, 35% red and 15% blue-RBY, 50% far-red, 35% red and 15% blue-RBFR and white fluorescent light (WFl, control). RBG light stimulated shoots' biomass production. RBFR had a beneficial impact on stevioside biosynthesis (1.62 mg/g dry weight, DW), while RBUV favoured the production of rebaudioside A (3.15 mg/g DW). Neochlorogenic, chlorogenic, caffeic, 4-feruloylquinic, isochlorogenic A, rosmarinic acids and the flavonoid quercitrin were identified in the obtained material. A stimulatory effect of RBFR and RBUV on the biosynthesis of phenolic compounds was noted. LED light also influenced stomata appearance, stomata density, photosynthetic pigments, soluble sugar content and antioxidant enzyme activities in stevia shoots. This is the first report to provide evidence of the stimulating effect of LED light on biomass yield, SGs production and phenolic compounds in stevia shoot cultures.

Integrated transcriptomic, proteomic and metabolomic analyses revealing the roles of amino acid and sucrose metabolism in augmenting drought tolerance in Agropyron mongolicum

Drought, a major consequence of climate change, initiates molecular interactions among genes, proteins, and metabolites. Agropyron mongolicum a high-quality perennial grass species, exhibits robust drought resistance. However, the molecular mechanism underlying this resistance remaining largely unexplored. In this study, we performed an integrated analysis of the transcriptome, proteome, and metabolome of A. mongolicum under optimal and drought stress conditions. This combined analysis highlighted the pivotal role of transporters in responding to drought stress. Moreover, metabolite profiling indicated that arginine and proline metabolism, as well as the pentose phosphate pathway, are significantly involved in the drought response of A. mongolicum. Additionally, the integrated analysis suggested that proline metabolism and the pentose phosphate pathway are key elements of the drought resistance strategy in A. mongolicum plants. In summary, our research elucidates the drought adaptation mechanisms of A. mongolicum and identifies potential candidate genes for further study.

Cadmium immobilization by mercapto-palygorskite in alkaline soil: Impacts on soil microbial communities and wheat rhizosphere metabolism

Weakly alkaline cadmium (Cd) contaminated soil in China has aroused great concern regarding its impact on food security and human health. Mercapto-modified palygorskite (MP) has exhibited good potential to minimize Cd accumulation in wheat, it is imperative to understand the underlying mechanisms within the soil-wheat-microbial system for sustainable development of agrochemicals. This study evaluated the effects of various MP dosages on soil Cd bioavailability, rhizosphere metabolomics, microbial community structure and wheat growth. The results indicated that MP (0.05-0.2 %) application significantly reduced Cd accumulation in wheat grains by 59.0-83.2 % (p < 0.05) and inhibited Cd translocation from root to grain. MP also promoted Mn oxide formation and redistributed the exchangeable Cd to Fe-Mn oxide-bound forms (44.2-109.6 %), thus lowering soil Cd bioavailability by 17.9-32.5 %. Additionally, MP reduced wheat rhizosphere organic acid levels, altered rhizosphere carbon and nitrogen pools, and stimulated the growth of Cd-tolerant Alternaria and Cladosporium, while inhibiting the growth of Fusarium. These findings highlight the potential of MP to modulate soil rhizosphere metabolism and microbial communities, offering a novel perspective on its environmental implications and supporting agrochemical sustainability.

Comprehensive effects of acetamiprid uptake and translocation from soil on pak choi and lettuce at the environmental level

Acetamiprid (ACE) is widely used in agriculture to control pests. However, its accumulation in soil and subsequent translocation to plants can impact plant growth and development through mechanisms that remain unclear. This study evaluated the comprehensive effects of residual ACE from soil on cultivated pak choi and lettuce at environmental levels. Results showed that more than 90 % of ACE residues in the soils dissipated within 14 days. The average root concentration factor (RCF) values of pak choi and lettuce were 1.442 and 0.318, respectively, while the average translocation factor (TF) values were 2.145 for pak choi and 5.346 for lettuce. Seedling height increased by 6.32 % in pak choi but decreased by 8.54 % in lettuce. Furthermore, chlorophyll content decreased by 14.6 % in pak choi and increased by 23.7 % in lettuce. Non-targeted metabolomics analysis showed significant disturbances in carbohydrates, amino acids, and secondary metabolite levels. Additionally, KEGG pathway analysis revealed the down-regulation of amino acid metabolites in both vegetables, alongside an up-regulation of flavone and flavonol biosynthesis in pak choi. This research enhances the understanding of the effects and underlying metabolic mechanism of ACE on different vegetables.

Effect of sodium metabisulfite treatment and storage condition on metabolic profile of young coconut (Cocos nucifera L.)

Young coconuts (Cocos nucifera L.) used for export are trimmed to reduce their size and weight to lower transport costs. However, trimmed coconuts have a shorter shelf life due to microbial spoilage and surface discoloration caused by enzymatic browning. To minimize these effects, trimmed coconuts were dipped in an anti-browning agent, sodium metabisulfite (SMB), and stored under ambient conditions. However, there have been no reports on the effects of SMB treatment on metabolome changes in the flesh and water of young coconuts. Hence, this study investigated the metabolite changes in trimmed young coconuts after SMB treatment under different storage conditions using a gas chromatography (GC)/mass spectrometry (MS) metabolomic profiling approach. Tall young coconut samples were trimmed and treated with a 2% SMB solution for 5 min before storage at 25 °C or 4 °C for 2-4 weeks. Coconut flesh and water samples were collected after storage for 0, 2, and 4 weeks, and were subjected to GC-MS analysis. The results showed that the major metabolites affected by coconut deterioration were amino acids, sugars, and sugar alcohols. SMB treatment and/or refrigeration can help prevent metabolite changes in the flesh and water of young coconuts. In the future, improvements in storage conditions based on metabolite profiles should be explored.

Hot air treatment alleviates chilling injury of sweet potato tuberous roots by regulating osmoregulatory substances and inducing antioxidant defense system

Sweet potato tuberous roots are susceptible to chilling injury (CI) when stored below 10 °C. In this study, we investigated the mitigating effects of hot air (HA) treatment on CI. Results showed that HA45°C-3h treatment delayed the CI and internal browning during cold storage. After HA45°C-3h treatment, the cells' structural integrity was maintained, malondialdehyde accumulation and ion leakage were inhibited. Additionally, the osmoregulatory substances, such as total soluble solids, proline were maintained, and soluble protein was enhanced. Higher activity of antioxidant enzymes including superoxide dismutase, catalase, ascorbate peroxidase, and glutathione reductase, and the antioxidant substances including ascorbic acid, glutathione, total phenols, and flavonoids were observed in sweet potato tuberous roots treated by HA45°C-3h than untreated group. Our study suggested that HA45°C-3h treatment could reduce CI and maintain a better quality of sweet potato tuberous roots following cold storage.

Early Response of the Populus nigra L. × P. maximowiczii Hybrid to Soil Enrichment with Metals

This study aimed to investigate the response of Populus nigra L. × Populus maximowiczii to the addition of selected metals in soil. Rooted cuttings were planted in pots containing soil enriched with equimolar concentrations of Pb, Zn, Al, Ni, and Cu (500 mL of 4 mM solutions of single metal salts: (Pb(NO3)2; Zn(NO3)2 × 6H2O; Al(NO3)3 × 9H2O; Ni(NO3)2 × 6H2O; or Cu(NO3)2 × 3H2O). Growth parameters, metal accumulation, and physiological and biochemical parameters were assessed after four weeks of cultivation, simulating early response conditions. The results showed diverse metal accumulation in poplar organs, along with an increase in biomass and minor changes in gas exchange parameters or chlorophyll fluorescence. Among low-molecular-weight organic acids, citric and succinic acids were dominant in the rhizosphere, and roots with malonic acid were also present in the shoots. Only p-coumaric acid was found in the phenolic profile of the roots. The shoots contained both phenolic acids and flavonoids, and their profile was diversely modified by particular metals. Sucrose and fructose content increased in shoots that underwent metal treatments, with glucose increasing only in Cu and Al treatments. Principal component analysis (PCA) revealed variations induced by metal treatments across all parameters. Responses to Pb and Zn were partially similar, while Cu, Ni, or Al triggered distinct reactions. The results indicate the adaptation of P. nigra L. × P. maximowiczii to soil containing elevated levels of metals, along with potential for soil remediation and metal removal. However, further studies are needed to evaluate the effect of differences in early responses to particular metals on plant conditions from a long-term perspective.

Brassinosteroid improves light stress tolerance in tomato (Lycopersicon esculentum) by regulating redox status, photosynthesis and photosystem II

Plants often experience variations in light intensity, referred to as light stress, that negatively impact important aspects of plant growth and development, including photosynthesis and antioxidant system. The photosynthetic machinery is susceptible to these disturbances, especially photosystem II and its reaction centers. We aimed to evaluate the role of brassinosteriod in plants under both high and low light conditions by examining various physiological parameters such as photosynthetic efficiency, pigment levels, and enzymatic activity of various antioxidant enzymes in one month old tomato plants. We investigated various chlorophyll fluorescence parameters under low light (LL) and high light (HL) conditions and the associated gene expression related to photosynthesis, including plastocyanin, ferredoxin, and photosystem II oxygen-evolving enhancer protein 3 (PsbQ). Our results indicate that exogenous brassinosteroid application considerably increased tolerance to both high and low light stress in 4-week-old tomato as treated plants displayed enhanced photosynthesis, reduced oxidative damage, and increased antioxidant enzyme activity in comparison to control plants. Furthermore, brassinosteroid treatment enhanced the expression of genes associated with antioxidant pathways, which significantly contributed to the recovery of chlorophyll fluorescence parameters crucial for plant growth and development. Our results provide valuable insights into how brassinosteroid reduces light-induced stress in tomato plants.

Posphoproteomics profiling reveals the regulatory role of a phosphorylated protein PvFBA1 in cadmium tolerance in seashore paspalum

Seashore paspalum (Paspalum vaginatum) is a warm-season and perennial turfgrass and is known for its cadmium (Cd)-stress tolerance. Here, a Phosphoproteomics analysis was performed to examine the key proteins relating to Cd tolerance in seashore paspalum. Fructose 1,6-biphosphate aldolase, PvFBA1, was identified for its phosphorylated state after exposure to Cd stress. Specifically, the phosphorylation of PvFBA1 was enhanced in several metabolic pathways, including pentose phosphate pathway (PPP), carbon fixation and biosynthesis of amino acids under Cd stress. By transforming PvFBA1 into Arabidopsis, the PvFBA1-OE plants exhibited longer roots, greater FBA activity and higher soluble sugar content than WT under 100 µM CdCl2 treatment. By expressing the PvFBA1 in yeast, a serine 50 phosphorylation site was identified as functional site. By microscale thermophoresis experiment, we indicted that PvFBA1can bind Cd directly enhancing its phosphorylation level to alleviate the damage of Cd. This finding may provide new insights into the molecular mechanisms of plants Cd tolerance.

Changes in SWEET-mediated sugar partitioning affect photosynthesis performance and plant response to drought

Sugars, produced through photosynthesis, are at the core of all organic compounds synthesized and used for plant growth and their response to environmental changes. Their production, transport, and utilization are highly regulated and integrated throughout the plant life cycle. The maintenance of sugar partitioning between the different subcellular compartments and between cells is important in adjusting the photosynthesis performance and response to abiotic constraints. We investigated the consequences of the disruption of four genes coding for SWEET sugar transporters in Arabidopsis (SWEET11, SWEET12, SWEET16, and SWEET17) on plant photosynthesis and the response to drought. Our results show that mutations in both SWEET11 and SWEET12 genes lead to an increase of cytosolic sugars in mesophyll cells and phloem parenchyma cells, which impacts several photosynthesis-related parameters. Further, our results suggest that in the swt11swt12 double mutant, the sucrose-induced feedback mechanism on stomatal closure is poorly efficient. On the other hand, changes in fructose partitioning in mesophyll and vascular cells, measured in the swt16swt17 double mutant, positively impact gas exchanges, probably through an increased starch synthesis together with higher vacuolar sugar storage. Finally, we propose that the impaired sugar partitioning, rather than the total amount of sugars observed in the quadruple mutant, is responsible for the enhanced sensitivity upon drought. This work highlights the importance of considering SWEET-mediated sugar partitioning rather than global sugar content in photosynthesis performance and plant response to drought. Such knowledge will pave the way to design new strategies to maintain plant productivity in a challenging environment.

Brassinosteroids Alleviate Salt Stress by Enhancing Sugar and Glycine Betaine in Pepper (Capsicum annuum L.)

Salt stress is a major abiotic factor that negatively impacts the growth, performance, and secondary metabolite production in pepper (Capsicum annuum L.) plants. Brassinosteroids (BRs) play a crucial role in enhancing plant tolerance to abiotic stress, yet their potential in mitigating salt stress in pepper plants, particularly by promoting sugar and glycine betaine accumulation, remains underexplored. In this study, we investigated the effects of the foliar application of 2,4-epibrassinolide (EBR) on salt-stressed pepper seedlings. Our findings revealed that EBR treatment significantly increased the levels of proline, sugar, and glycine betaine under salt stress compared to untreated controls. Moreover, EBR enhanced the antioxidant defense mechanisms in pepper seedlings by increasing sugar and glycine betaine levels, which contributed to the reduction of reactive oxygen species (ROS) and malondialdehyde (MDA) accumulation.

A CC-Type Glutaredoxins GRX480 Functions in Cadmium Tolerance by Maintaining Redox Homeostasis in Arabidopsis

Cadmium (Cd) toxicity causes oxidative stress damage in plant cells. Glutaredoxins (GRXs), a type of small oxidoreductase, play a crucial role in modulating thiol redox states. However, whether GRXs act in Cd stress remains to be identified. Here, we reveal that Arabidopsis GRX480, a member of the CC-type family, enhances plant Cd stress tolerance. The GRX480 mutants exhibit enhanced sensitivity to Cd stress, manifested by shortened root, reduced biomass, lower chlorophyll and proline levels, and decreased photosynthetic efficiency compared with the wild type. The Cd concentration in GRX480 mutants is higher than the wild type, resulting from the inhibition of Cd efflux and transport genes transcription. Lower levels of GSH were detected in Cd-treated GRX480 mutants than in the wild type, indicating that GRX480 regulates plant Cd tolerance by influencing the balance between GSH and GSSG. Furthermore, the hyperaccumulation of reactive oxygen species (ROS) is associated with decreased expression of H2O2 scavenging genes in Cd-treated GRX480 mutants. Additionally, more toxic reactive carbonyl species (RCS), produced during oxidative stress, accumulate in Cd-treated GRX480 mutants than in wild type. Overall, our study establishes a critical role of GRX480 in response to Cd stress, highlighting its multifaceted contributions to detoxification and the maintenance of redox homeostasis.

Exogenous glucose irrigation alleviates cold stress by regulating soluble sugars, ABA and photosynthesis in melon seedlings

Melon (Cucumis melo L.) is an important economic crop and widely planted around the world. Cold stress severely limits its development and yield. Carbohydrates play multiple roles in plant cold tolerance. However, little is known in melon. Based on the metabolome analysis, a total of 635 metabolites were identified upon cold stress in melon seedlings. KEGG analysis shows that differential metabolites were mainly enriched in the glycolysis/gluconeogenesis pathway and pentose phosphate pathway, with glucose being one of the most prominent metabolites. To further investigate the role of glucose in cold tolerance of melon seedlings. We found that root irrigation was more effective than foliar spraying for exogenous glucose application, with optimal concentrations of 0.5% and 1% for cold-tolerant and cold-sensitive genotypes, respectively. Glucose irrigation mainly promoted soluble sugar accumulation to reduce cold damage in melon seedlings. For cold-sensitive genotype, only the sucrose content could be increased, while for cold-tolerant genotype, sucrose, fructose and glucose content could be simultaneously increased. Meanwhile, glucose irrigation recruited ABA not antioxidant enzyme system to cope with cold stress. Hence, glucose watering could improve the maximum photochemical efficiency of seedling photosystem II (Fv/Fm), alleviate physiological drought, reduce the accumulation of malondialdehyde, and accelerated the photosynthetic efficiency of melon seedlings. Based on coefficient of variation and principal component analysis, it was confirmed again that glucose irrigation did alter the strategies for withstanding cold stress and enhance the cold tolerance of melon seedlings. Thus, the results would provide a theoretical basis and feasible measures to protect melon seedings from cold damage.

Metabolite concentrations and the expression profiles of the corresponding metabolic pathway genes in eggplant (Solanum melongena L.) fruits of contrasting colors

Eggplant (Solanum melongena L.) ranks fifth in importance among vegetable crops of the Solanaceae family, in part due to the high antioxidant properties and polyphenol content of the fruit. Along with the popular purple-fruited varieties of S. melongena, there are cultivars, the fruits of which are rich in phenolic compounds, but are white-colored due to the lack of anthocyanin biosynthesis. Determination of the amount of anthocyanins and other phenolic compounds, as well as carotenoids and sugars, is included in the assessment of the quality of eggplant fruits of commercial (technical) ripeness. In addition to antioxidant and taste properties, these metabolites are associated with fruit resistance to various stress factors. In this study, a comparative analysis of the content of anthocyanins, carotenoids and soluble sugars (sucrose, glucose, fructose) in the peel and pulp of the fruit of both technical and biological ripeness was carried out in purple-fruited (cv. Vlas) and white-fruited (cv. Snezhny) eggplant accessions of domestic selection. The peel and pulp of biologically ripe fruits of the cvs Vlas and Snezhny were used for comparative transcriptomic analysis. The key genes of the flavonoid and carotenoid metabolism, sucrose hydrolysis, and soluble sugar transport were shown to be differentially expressed between fruit tissues, both within each cultivar and between them. It has been confirmed that the purple color of the peel of the cv. Vlas fruit is due to substantial amounts of anthocyanins. Flavonoid biosynthesis genes showed a significantly lower expression level in the ripe fruit of the cv. Vlas in comparison with the cv. Snezhny. However, in both cultivars, transcripts of anthocyanin biosynthesis genes (DFR, ANS, UFGT) were not detected. Additionally, the purple fruit of the cv. Vlas accumulated more carotenoids and sucrose and less glucose and fructose than the white fruit of the cv. Snezhny. Biochemical data corresponded to the differential expression pattern of the key genes encoding the structural proteins of metabolism and transport of the compounds analyzed.

Harnessing de novo transcriptome sequencing to identify and characterize genes regulating carbohydrate biosynthesis pathways in Salvia guaranitica L

Introduction

Carbohydrate compounds serve multifaceted roles, from energy sources to stress protectants, found across diverse organisms including bacteria, fungi, and plants. Despite this broad importance, the molecular genetic framework underlying carbohydrate biosynthesis pathways, such as starch, sucrose, and glycolysis/gluconeogenesis in Salvia guaranitica, remains largely unexplored.

Methods

In this study, the Illumina-HiSeq 2500 platform was used to sequence the transcripts of S. guaranitica leaves, generating approximately 8.2 Gb of raw data. After filtering and removing adapter sequences, 38 million reads comprising 210 million high-quality nucleotide bases were obtained. De novo assembly resulted in 75,100 unigenes, which were annotated to establish a comprehensive database for investigating starch, sucrose, and glycolysis biosynthesis. Functional analyses of glucose-6-phosphate isomerase (SgGPI), trehalose-6-phosphate synthase/phosphatase (SgT6PS), and sucrose synthase (SgSUS) were performed using transgenic Arabidopsis thaliana.

Results

Among the unigenes, 410 were identified as putatively involved in these metabolic pathways, including 175 related to glycolysis/gluconeogenesis and 235 to starch and sucrose biosynthesis. Overexpression of SgGPI, SgT6PS, and SgSUS in transgenic A. thaliana enhanced leaf area, accelerated flower formation, and promoted overall growth compared to wild-type plants.

Discussion

These findings lay a foundation for understanding the roles of starch, sucrose, and glycolysis biosynthesis genes in S. guaranitica, offering insights into future metabolic engineering strategies for enhancing the production of valuable carbohydrate compounds in S. guaranitica or other plants.

Growth, Biochemical Traits, Antioxidant Enzymes, and Essential Oils of Four Aromatic and Medicinal Plants Cultivated in Phosphate-Mine Residues

Revegetation emerges as a promising approach to alleviate the adverse impacts of mining residues. However, it is essential to evaluate the characteristics of these materials and select suitable plant species to ensure successful ecosystem restoration. This study aimed to investigate the effects of phosphate-mine residues (MR) on the growth, biochemical properties, and essential oil concentration of Rosmarinus officinalis L., Salvia Officinalis L., Lavandula dentata L., and Origanum majorana L. The results showed that R. officinalis L. appeared to be particularly well-suited to thriving in MR soil. Our finding also revealed that L. dentata L., O. majorana L., and S. officinalis L. grown in MR exhibited significantly lower growth performance (lower shoot length, smaller leaves, and altered root structure) and higher antioxidant activities, with an alterations of photosynthetic pigment composition. They showed a decrease in total chlorophylls when grown on MR (0.295, 0.453, and 0.562 mg g-1 FW, respectively) compared to the control (0.465, 0.807, and 0.808 mg g-1 FW, respectively); however, they produced higher essential oil content (1.8%, 3.06%, and 2.88%, respectively). The outcomes of this study could offer valuable insights for the advancement of revegetation technologies and the utilization of plant products derived from phosphate-mine residues.

Metabolomic and Physiological Analyses Reveal the Effects of Different Storage Conditions on Sinojackia xylocarpa Hu Seeds

BACKGROUNDS

Sinojackia xylocarpa Hu is a deciduous tree in the Styracaceae family, and it is classified as a Class II endangered plant in China. Seed storage technology is an effective means of conserving germplasm resources, but the effects of different storage conditions on the quality and associated metabolism of S. xylocarpa seeds remain unclear. This study analyzed the physiological and metabolic characteristics of S. xylocarpa seeds under four storage conditions.

RESULTS

Our findings demonstrate that reducing seed moisture content and storage temperature effectively prolongs storage life. Seeds stored under that condition exhibited higher internal nutrient levels, lower endogenous abscisic acid (ABA) hormone levels, and elevated gibberellic acid (GA3) levels. Additionally, 335 metabolites were identified under four different storage conditions. The analysis indicates that S. xylocarpa seeds extend seed longevity and maintain cellular structural stability mainly by regulating the changes in metabolites related to lipid, amino acid, carbohydrate, and carotenoid metabolic pathways under the storage conditions of a low temperature and low seed moisture.

CONCLUSIONS

These findings provide new insights at the physiological and metabolic levels into how these storage conditions extend seed longevity while also offering effective storage strategies for preserving the germplasm resources of S. xylocarpa.

A Preliminary Study on the Whole-Plant Regulations of the Shrub Campylotropis polyantha in Response to Hostile Dryland Conditions

Drylands cover more than 40% of global land surface and will continue to expand by 10% at the end of this century. Understanding the resistance mechanisms of native species is of particular importance for vegetation restoration and management in drylands. In the present study, metabolome of a dominant shrub Campylotropis polyantha in a dry-hot valley were investigated. Compared to plants grown at the wetter site, C. polyantha tended to slow down carbon (C) assimilation to prevent water loss concurrent with low foliar reactive oxygen species and sugar concentrations at the drier and hotter site. Nitrogen (N) assimilation and turn over were stimulated under stressful conditions and higher leaf N content was kept at the expense of root N pools. At the drier site, roots contained more water but less N compounds derived from the citric acid cycle. The site had little effect on metabolites partitioning between leaves and roots. Generally, roots contained more C but less N. Aromatic compounds were differently impacted by site conditions. The present study, for the first time, uncovers the apparent metabolic adaptations of C. polyantha to hostile dryland conditions. However, due to the limited number of samples, we are cautious about drawing general conclusions regarding the resistance mechanisms. Further studies with a broader spatial range and larger time scale are therefore recommended to provide more robust information for vegetation restoration and management in dryland areas under a changing climate.

The physiochemical characteristics and glycerolipid profile of Cycas panzhihuaensis in response to individual and combined drought and freezing temperature stress

The frequency and intensity of the occurrence of drought (D) events during winter are increasing in most areas of China. To explore the interactive effects of D and freezing temperature (F) on plants of endangered Cycas panzhihuaensis, some physiochemical characteristics and the lipid profile were determined. Drought and F stress had no or little impact on the traits of leaves, which, however, bleached following a combination of D and F treatment (DF). Drought treatment did not affect the chlorophyll fluorescence parameters and the flavonoid content of C. panzhihuaensis. Besides the increase in flavonoid content, a decrease of photochemical efficiency and an increase of heat dissipation were induced by both F and DF treatment, with the effects being greater in the latter treatment. The malondialdehyde content decreased significantly and the total antioxidant capacity increased significantly in the plants exposed to both D and DF treatments. The D treatment did not impact the amount of phospholipids but led to an accumulation of saccharolipids. Additionally, the amount of both phospholipids and saccharolipids remained unchanged following F treatment but decreased significantly following DF treatment compared with those of the control. The unsaturation level did not change significantly in most lipid classes of membrane glycerolipids following various stresses but increased significantly in phosphatidylserine, monogalactosylmonoacylglycerol, digalactosyldiacylglycerol and sulphoquinovosyldiacylglycerol following D or both D and F treatments. Generally, plants of C. panzhihuaensis showed relatively strong tolerance to individual D stress, while D aggravated the F-induced damage, which was likely caused by the degradation of the membrane glycerolipids.

Metabolite responses of cucumber on copper toxicity in presence of fullerene C60 derivatives

Copper (Cu) toxicity in crops is a result of excessive release of Cu into environment. Little is known about mitigation of Cu toxicity through the application of carbon-based nanomaterials including water-soluble fullerene C60 derivatives. Two derivatives of fullerene were examined: polyhydroxylated C60 (fullerenol) and arginine C60 derivative. In order to study the response of Cu-stressed plants (Cucumis sativus L.) to these nanomaterials, metabolomics analysis by gas chromatography-mass spectrometry (GC-MS) was performed. Excess Cu (15 μM) caused substantial increase in xylem sap Cu, retarded dry biomass and leaf chlorosis of hydroponically grown cucumber. In Cu-stressed leaves, metabolomes was disturbed towards suppression metabolism of nitrogen (N) compounds and activation metabolism of hexoses. Also, upregulation of some metabolites involving in antioxidant defense system, such as ascorbic acid, tocopherol and ferulic acid, was occurred in Cu-stressed leaves. Hydroponically added fullerene adducts decreased the xylem sap Cu and alleviated Cu toxicity with effectiveness has been most pronounced for arginine C60 derivative. Metabolic responses of plants subjected to high Cu with fullerene derivatives were opposite to that observed under Cu alone. Fatty acids up-regulation (linolenic acid) and antioxidant molecules (tocopherol) down-regulation might indicate that arginine C60 adduct can alleviate Cu induced oxidative stress. Although fullerenol slightly improved cucumber growth, its effect on metabolic state of Cu-stressed plants was not statistically significant. We suggest that tested fullerene C60 adducts have a potential to prevent Cu toxicity in plants through a mechanism associated with their capability to restrict xylem transport of Cu from roots to shoot, and to maintain antioxidative properties of plants.

Wheat TaNACα18 functions as a positive regulator of high-temperature adaptive responses and improves cell defense machinery

Global wheat production amounted to >780 MMT during 2022-2023 whose market size are valued at >$128 billion. Wheat is highly susceptible to high-temperature stress (HTS) throughout the life cycle and its yield declines 5-7% with the rise in each degree of temperature. Previously, we reported an array of HTS-response markers from a resilient wheat cv. Unnat Halna and described their putative role in heat acclimation. To complement our previous results and identify the key determinants of thermotolerance, here we examined the cytoplasmic proteome of a sensitive cv. PBW343. The HTS-triggered metabolite reprograming highlighted how proteostasis defects influence the formation of an integrated stress-adaptive response. The proteomic analysis identified several promising HTS-responsive proteins, including a NACα18 protein, designated TaNACα18, whose role in thermotolerance remains unknown. Dual localization of TaNACα18 suggests its crucial functions in the cytoplasm and nucleus. The homodimerization of TaNACα18 anticipated its function as a transcriptional coactivator. The complementation of TaNACα18 in yeast and overexpression in wheat demonstrated its role in thermotolerance across the kingdom. Altogether, our results suggest that TaNACα18 imparts tolerance through tight regulation of gene expression, cell wall remodeling and activation of cell defense responses.

Botrytis cinerea causes different plant responses in grape (Vitis vinifera) berries during noble and grey rot: diverse metabolism versus simple defence

The complexity of the interaction between the necrotrophic pathogen Botrytis cinerea and grape berries (Vitis vinifera spp.) can result in the formation of either the preferred noble rot (NR) or the loss-making grey rot (GR), depending on the prevailing climatic conditions. In this study, we focus on the functional gene set of V. vinifera by performing multidimensional scaling followed by differential expression and enrichment analyses. The aim of this study is to identify the differences in gene expression between grape berries in the phases of grey rot, noble rot, and developing rot (DR, in its early stages) phases. The grapevine transcriptome at the NR phase was found to exhibit significant differences from that at the DR and GR stages, which displayed strong similarities. Similarly, several plant defence-related pathways, including plant-pathogen interactions as hypersensitive plant responses were found to be enriched. The results of the analyses identified a potential plant stress response pathway (SGT1 activated hypersensitive response) that was found to be upregulated in the GR berry but downregulated in the NR berry. The study revealed a decrease in defence-related in V. vinifera genes during the NR stages, with a high degree of variability in functions, particularly in enriched pathways. This indicates that the plant is not actively defending itself against Botrytis cinerea, which is otherwise present on its surface with high biomass. This discrepancy underscores the notion that during the NR phase, the grapevine and the pathogenic fungi interact in a state of equilibrium. Conversely the initial stages of botrytis infection manifest as a virulent fungus-plant interaction, irrespective of whether the outcome is grey or noble rot.

The Physiological and Molecular Mechanisms of Exogenous Melatonin Promote the Seed Germination of Maize (Zea mays L.) under Salt Stress

Salt stress caused by high concentrations of Na+ and Cl- in soil is one of the most important abiotic stresses in agricultural production, which seriously affects grain yield. The alleviation of salt stress through the application of exogenous substances is important for grain production. Melatonin (MT, N-acetyl-5-methoxytryptamine) is an indole-like small molecule that can effectively alleviate the damage caused by adversity stress on crops. Current studies have mainly focused on the effects of MT on the physiology and biochemistry of crops at the seedling stage, with fewer studies on the gene regulatory mechanisms of crops at the germination stage. The aim of this study was to explain the mechanism of MT-induced salt tolerance at physiological, biochemical, and molecular levels and to provide a theoretical basis for the resolution of MT-mediated regulatory mechanisms of plant adaptation to salt stress. In this study, we investigated the germination, physiology, and transcript levels of maize seeds, analyzed the relevant differentially expressed genes (DEGs), and examined salt tolerance-related pathways. The results showed that MT could increase the seed germination rate by 14.28-19.04%, improve seed antioxidant enzyme activities (average increase of 11.61%), and reduce reactive oxygen species accumulation and membrane oxidative damage. In addition, MT was involved in regulating the changes of endogenous hormones during the germination of maize seeds under salt stress. Transcriptome results showed that MT affected the activity of antioxidant enzymes, response to stress, and seed germination-related genes in maize seeds under salt stress and regulated the expression of genes related to starch and sucrose metabolism and phytohormone signal transduction pathways. Taken together, the results indicate that exogenous MT can affect the expression of stress response-related genes in salt-stressed maize seeds, enhance the antioxidant capacity of the seeds, reduce the damage induced by salt stress, and thus promote the germination of maize seeds under salt stress. The results provide a theoretical basis for the MT-mediated regulatory mechanism of plant adaptation to salt stress and screen potential candidate genes for molecular breeding of salt-tolerant maize.

Tolerance Mechanisms of Olive Tree (Olea europaea) under Saline Conditions

The olive tree (Olea europaea L.) is an evergreen tree that occupies 19% of the woody crop area and is cultivated in 67 countries on five continents. The largest olive production region is concentrated in the Mediterranean basin, where the olive tree has had an enormous economic, cultural, and environmental impact since the 7th century BC. In the Mediterranean region, salinity stands out as one of the main abiotic stress factors significantly affecting agricultural production. Moreover, climate change is expected to lead to increased salinization in this region, threatening olive productivity. Salt stress causes combined damage by osmotic stress and ionic toxicity, restricting olive growth and interfering with multiple metabolic processes. A large variability in salinity tolerance among olive cultivars has been described. This paper aims to synthesize information from the published literature on olive adaptations to salt stress and its importance in salinity tolerance. The morphological, physiological, biochemical, and molecular mechanisms of olive tolerance to salt stress are reviewed.

Metabolic Aspects of Lentil-Fusarium Interactions

Fusarium oxysporum f. sp. lentis (Fol) is considered the most destructive disease for lentil (Lens culinaris Medik.) worldwide. Despite the extensive studies elucidating plants' metabolic response to fungal agents, there is a knowledge gap in the biochemical mechanisms governing Fol-resistance in lentil. Τhis study aimed at comparatively evaluating the metabolic response of two lentil genotypes, with contrasting phenotypes for Fol-resistance, to Fol-inoculation. Apart from gaining insights into the metabolic reprogramming in response to Fol-inoculation, the study focused on discovering novel biomarkers to improve early selection for Fol-resistance. GC-MS-mediated metabolic profiling of leaves and roots was employed to monitor changes across genotypes and treatments as well as their interaction. In total, the analysis yielded 178 quantifiable compounds, of which the vast majority belonged to the groups of carbohydrates, amino acids, polyols and organic acids. Despite the magnitude of metabolic fluctuations in response to Fol-inoculation in both genotypes under study, significant alterations were noted in the content of 18 compounds, of which 10 and 8 compounds referred to roots and shoots, respectively. Overall data underline the crucial contribution of palatinitol and L-proline in the metabolic response of roots and shoots, respectively, thus offering possibilities for their exploitation as metabolic biomarkers for Fol-resistance in lentil. To the best of our knowledge, this is the first metabolomics-based approach to unraveling the effects of Fol-inoculation on lentil's metabolome, thus providing crucial information related to key aspects of lentil-Fol interaction. Future investigations in metabolic aspects of lentil-Fol interactions will undoubtedly revolutionize the search for metabolites underlying Fol-resistance, thus paving the way towards upgrading breeding efforts to combat fusarium wilt in lentil.

Inhibition of microelement accumulation and disorder of saccharide and amino acid metabolism explain rice grain empty under dimethylarsinic acid stress

KEY MESSAGE

Metabolomic and transcriptomic analyses revealed an intensification of energy metabolism in rice grains under DMA stress, possibly causing the consumption of sugars or non-sugars and the development of unfilled grains Excessive dimethylarsinic acid (DMA) causes rice straighthead disease, a physiological disorder typically with erect panicle due to empty grain at maturity. Although the toxicity of DMA and its uptake and transport in rice are well recognized, the underlying mechanism of unfilled grains remains unclear. Therefore, a pot experiment was conducted using a susceptible variety (Ruanhuayou1179, RHY) and a resistant one (Nanjingxiangzhan, NJXZ) via the metabolomic and transcriptomic approaches to explore the mechanisms of empty grains in diseased rice under DMA stress. The results demonstrate an increase in total and methylated As in grains of RHY and NJXZ under DMA addition, with RHY containing higher levels of DMA. DMA addition increased the soluble sugar content in grains of RHY and NJXZ by 17.1% and 14.3% compared to the control, respectively, but significantly reduced the levels of amino acid, soluble protein, and starch. The decrease of grain Zn and B contents was also observed, and inadequate Zn might be a key factor limiting rice grain yield under DMA stress. Notably, DMA addition altered the expression levels of genes involved in the transport of sugar, amino acids, nitrates/peptides, and mineral ions. In sugar and amino acid metabolism, the reduction of metabolites and the upregulated expression of genes reflect positive regulation at the level of energy metabolism, implying that the reduction of grain starch and proteins might be ascribed to generate sufficient energy to resist the stress. This study provides a useful reference for understanding the molecular mechanism of grain emptying under DMA stress.

A practical guide to the discovery of biomolecules with biostimulant activity

The growing demand for sustainable solutions in agriculture, which are critical for crop productivity and food quality in the face of climate change and the need to reduce agrochemical usage, has brought biostimulants into the spotlight as valuable tools for regenerative agriculture. With their diverse biological activities, biostimulants can contribute to crop growth, nutrient use efficiency, and abiotic stress resilience, as well as to the restoration of soil health. Biomolecules include humic substances, protein lysates, phenolics, and carbohydrates have undergone thorough investigation because of their demonstrated biostimulant activities. Here, we review the process of the discovery and development of extract-based biostimulants, and propose a practical step-by-step pipeline that starts with initial identification of biomolecules, followed by extraction and isolation, determination of bioactivity, identification of active compound(s), elucidation of mechanisms, formulation, and assessment of effectiveness. The different steps generate a roadmap that aims to expedite the transfer of interdisciplinary knowledge from laboratory-scale studies to pilot-scale production in practical scenarios that are aligned with the prevailing regulatory frameworks.

Paired metabolomics and volatilomics provides insight into transient high light stress response mechanisms of the coral Montipora mollis

The coral holobiont is underpinned by complex metabolic exchanges between different symbiotic partners, which are impacted by environmental stressors. The chemical diversity of the compounds produced by the holobiont is high and includes primary and secondary metabolites, as well as volatiles. However, metabolites and volatiles have only been characterised in isolation so far. Here, we applied a paired metabolomic-volatilomic approach to characterise holistically the chemical response of the holobiont under stress. Montipora mollis fragments were subjected to high-light stress (8-fold higher than the controls) for 30 min. Photosystem II (PSII) photochemical efficiency values were 7-fold higher in control versus treatment corals immediately following high-light exposure, but returned to pre-stress levels after 30 min of recovery. Under high-light stress, we identified an increase in carbohydrates (> 5-fold increase in arabinose and fructose) and saturated fatty acids (7-fold increase in myristic and oleic acid), together with a decrease in fatty acid derivatives in both metabolites and volatiles (e.g., 80% decrease in oleamide and nonanal), and other antioxidants (~ 85% decrease in sorbitol and galactitol). These changes suggest short-term light stress induces oxidative stress. Correlation analysis between volatiles and metabolites identified positive links between sorbitol, galactitol, six other metabolites and 11 volatiles, with four of these compounds previously identified as antioxidants. This suggests that these 19 compounds may be related and share similar functions. Taken together, our findings demonstrate how paired metabolomics-volatilomics may illuminate broader metabolic shifts occurring under stress and identify linkages between uncharacterised compounds to putatively determine their functions.