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Goedert D, Jensen H, Dickel L, Reid JM. Multi-generational fitness legacies of natural immigration: theoretical and empirical perspectives and opportunities. Biol Rev Camb Philos Soc 2025. [PMID: 39957338 DOI: 10.1111/brv.13183] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2024] [Revised: 01/06/2025] [Accepted: 01/07/2025] [Indexed: 02/18/2025]
Abstract
Natural dispersal between populations, and resulting immigration, influences population size and genetic variation and is therefore a key process driving reciprocal interactions between ecological and evolutionary dynamics. Here, population dynamic and evolutionary outcomes fundamentally depend not only on the relative fitnesses of natural immigrants and existing residents, but also on the fitness of their various descendants manifested in natural environments. Yet, the fitnesses of different sets of natural immigrants' descendants have rarely been explicitly or rigorously estimated or rationalised in the context of wild spatially structured populations. We therefore still have surprisingly limited capability to understand or predict the ultimate multi-generational impacts of natural immigration on population and evolutionary dynamics. Key theoretical frameworks that predict fitness outcomes of outcrossing between lineages have been developed and widely utilised in the contexts of agriculture and speciation research. These frameworks have also been applied in conservation genetics research to predict positive (widely termed "heterosis") and negative (widely termed "outbreeding depression") outcomes in the context of genetic rescue of highly inbred populations. However, these frameworks have rarely been utilised explicitly to guide analyses of multi-generational legacies of regular natural immigrants in the context of evolutionary ecology, precluding inferences on the basis of, and implications of, sub-population divergence. Accordingly, to facilitate translation of concepts and inspire new empirical efforts, we first review and synthesise key bodies of theory on multi-generational fitness outcomes, developed in the contexts of crosses between inbred lines and between different species. Such theory reveals how diverse fitness outcomes can be generated by common underlying mechanisms, depending on the genetic architecture of fitness, the forms of genotype-phenotype-fitness maps, and the relative roles of adaptive and non-adaptive mechanisms in population differentiation. Interestingly, such theory predicts particularly diverse fitness outcomes of crosses between weakly diverged lineages, constituting the parameter space where spatially structured populations lie. We then conduct a systematic literature review to assess the degree to which multi-generational outcomes of crosses between structured natural populations have actually been quantified. Our review shows a surprising paucity of empirical studies that quantify multi-generational fitness consequences of outcrossing resulting from natural immigration in the wild. Furthermore, studies undertaking experimental crosses among populations have used inconsistent methodologies, precluding quantitative or even qualitative overall conclusions. To initiate new progress, we outline how long-standing and recent methodological developments, including cutting-edge statistical and genomic tools, could be combined with field data sets to quantify the multi-generational fitness outcomes of crosses between residents and immigrants in nature. We thereby highlight key theoretical and empirical gaps that now need to be filled to further our understanding of dispersal-mediated drivers and constraints on eco-evolutionary dynamics arising in structured populations.
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Affiliation(s)
- Debora Goedert
- Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, Trondheim, NO-7491, Norway
| | - Henrik Jensen
- Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, Trondheim, NO-7491, Norway
| | - Lisa Dickel
- Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, Trondheim, NO-7491, Norway
- Department of Ecology, Swedish University of Agricultural Sciences, Uppsala, SE-750-07, Sweden
| | - Jane M Reid
- Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, Trondheim, NO-7491, Norway
- School of Biological Sciences, University of Aberdeen, Aberdeen, AB24 2TZ, UK
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2
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Bakner NW, Masto NM, Lavretsky P, Highway CJ, Keever AC, Blake‐Bradshaw AG, Askren RJ, Hagy HM, Feddersen JC, Osborne DC, Cohen BS. Mallard Hybridization With Domesticated Lineages Alters Spring Migration Behavior and Timing. Ecol Evol 2025; 15:e70706. [PMID: 39744458 PMCID: PMC11685176 DOI: 10.1002/ece3.70706] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2024] [Revised: 11/18/2024] [Accepted: 11/26/2024] [Indexed: 01/29/2025] Open
Abstract
Introgressive hybridization, the interbreeding and gene flow between different species, has become increasingly common in the Anthropocene, where human-induced ecological changes and the introduction of captively reared individuals are increasing secondary contact among closely related species, leading to gene flow between wild and domesticated lineages. As a result, domesticated-wild hybridization may potentially affect individual fitness, leading to maladaptive effects such as shifts in behavior or life-history decisions (e.g., migration patterns), which could influence population demographics. In North America, the release of captive-reared game-farm mallards (Anas platyrhynchos) for hunting has led to extensive hybridization with wild mallards, altering the genetic structure in the Atlantic and Mississippi flyways. We aimed to investigate differences in spring migratory behavior among 296 GPS-tagged mallards captured during winter in Tennessee and Arkansas with varying levels of hybridization. Despite relatively low levels of genetic introgression of game-farm genes, mallards with higher percentages of game-farm ancestry exhibited later departure and arrival times, shorter migration distances, and a tendency to establish residency at lower latitudes. Specifically, for every 10% increase in game-farm genetics, mallards departed 17.7% later, arrived 22.1% later, settled 3.3% farther south, and traveled 7.1% shorter distances during migration. These findings suggest that genetic introgression from game-farm mallards influences migratory behavior, potentially reducing fitness, and contributing to population declines in wild mallards. Our study presents a need for understanding how domestic hybridization effects fitness and behavioral change of other species.
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Affiliation(s)
- Nicholas W. Bakner
- College of Arts and SciencesTennessee Technological UniversityCookevilleTennesseeUSA
| | - Nicholas M. Masto
- College of Arts and SciencesTennessee Technological UniversityCookevilleTennesseeUSA
- Cornell Lab of OrnithologyCornell UniversityIthacaNew YorkUSA
| | - Philip Lavretsky
- Department of Biological SciencesUniversity of Texas at El PasoEl PasoTexasUSA
| | - Cory J. Highway
- College of Arts and SciencesTennessee Technological UniversityCookevilleTennesseeUSA
| | - Allison C. Keever
- College of Arts and SciencesTennessee Technological UniversityCookevilleTennesseeUSA
| | - Abigail G. Blake‐Bradshaw
- College of Arts and SciencesTennessee Technological UniversityCookevilleTennesseeUSA
- Illinois Natural History Survey, Forbes Biological Station–Bellrose Waterfowl Research Center, Prairie Research InstituteUniversity of Illinois at Urbana‐ChampaignHavanaIllinoisUSA
| | - Ryan J. Askren
- Division of Agriculture Experiment Station and Arkansas Forest Resources CenterUniversity of ArkansasMonticelloArkansasUSA
| | - Heath M. Hagy
- U.S. Fish and Wildlife Service, Region 6Habitat and Population Evaluation TeamBismarckNorth DakotaUSA
| | - Jamie C. Feddersen
- Migratory Gamebird ProgramTennessee Wildlife Resources AgencyNashvilleTennesseeUSA
| | - Douglas C. Osborne
- Division of Agriculture Experiment Station and Arkansas Forest Resources CenterUniversity of ArkansasMonticelloArkansasUSA
| | - Bradley S. Cohen
- College of Arts and SciencesTennessee Technological UniversityCookevilleTennesseeUSA
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3
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Poulin R, Salloum PM, Bennett J. Evolution of parasites in the Anthropocene: new pressures, new adaptive directions. Biol Rev Camb Philos Soc 2024; 99:2234-2252. [PMID: 38984760 DOI: 10.1111/brv.13118] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Revised: 06/27/2024] [Accepted: 07/02/2024] [Indexed: 07/11/2024]
Abstract
The Anthropocene is seeing the human footprint rapidly spreading to all of Earth's ecosystems. The fast-changing biotic and abiotic conditions experienced by all organisms are exerting new and strong selective pressures, and there is a growing list of examples of human-induced evolution in response to anthropogenic impacts. No organism is exempt from these novel selective pressures. Here, we synthesise current knowledge on human-induced evolution in eukaryotic parasites of animals, and present a multidisciplinary framework for its study and monitoring. Parasites generally have short generation times and huge fecundity, features that predispose them for rapid evolution. We begin by reviewing evidence that parasites often have substantial standing genetic variation, and examples of their rapid evolution both under conditions of livestock production and in serial passage experiments. We then present a two-step conceptual overview of the causal chain linking anthropogenic impacts to parasite evolution. First, we review the major anthropogenic factors impacting parasites, and identify the selective pressures they exert on parasites through increased mortality of either infective stages or adult parasites, or through changes in host density, quality or immunity. Second, we discuss what new phenotypic traits are likely to be favoured by the new selective pressures resulting from altered parasite mortality or host changes; we focus mostly on parasite virulence and basic life-history traits, as these most directly influence the transmission success of parasites and the pathology they induce. To illustrate the kinds of evolutionary changes in parasites anticipated in the Anthropocene, we present a few scenarios, either already documented or hypothetical but plausible, involving parasite taxa in livestock, aquaculture and natural systems. Finally, we offer several approaches for investigations and real-time monitoring of rapid, human-induced evolution in parasites, ranging from controlled experiments to the use of state-of-the-art genomic tools. The implications of fast-evolving parasites in the Anthropocene for disease emergence and the dynamics of infections in domestic animals and wildlife are concerning. Broader recognition that it is not only the conditions for parasite transmission that are changing, but the parasites themselves, is needed to meet better the challenges ahead.
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Affiliation(s)
- Robert Poulin
- Department of Zoology, University of Otago, P.O. Box 56, Dunedin, New Zealand
| | - Priscila M Salloum
- Department of Zoology, University of Otago, P.O. Box 56, Dunedin, New Zealand
| | - Jerusha Bennett
- Department of Zoology, University of Otago, P.O. Box 56, Dunedin, New Zealand
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Madeira D, Madeira C, Calosi P, Vermandele F, Carrier-Belleau C, Barria-Araya A, Daigle R, Findlay HS, Poisot T. Multilayer biological networks to upscale marine research to global change-smart management and sustainable resource use. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 944:173837. [PMID: 38866145 DOI: 10.1016/j.scitotenv.2024.173837] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2023] [Revised: 05/30/2024] [Accepted: 06/05/2024] [Indexed: 06/14/2024]
Abstract
Human activities are having a massive negative impact on biodiversity and ecological processes worldwide. The rate and magnitude of ecological transformations induced by climate change, habitat destruction, overexploitation and pollution are now so substantial that a sixth mass extinction event is currently underway. The biodiversity crisis of the Anthropocene urges scientists to put forward a transformative vision to promote the conservation of biodiversity, and thus indirectly the preservation of ecosystem functions. Here, we identify pressing issues in global change biology research and propose an integrative framework based on multilayer biological networks as a tool to support conservation actions and marine risk assessments in multi-stressor scenarios. Multilayer networks can integrate different levels of environmental and biotic complexity, enabling us to combine information on molecular, physiological and behaviour responses, species interactions and biotic communities. The ultimate aim of this framework is to link human-induced environmental changes to species physiology, fitness, biogeography and ecosystem impacts across vast seascapes and time frames, to help guide solutions to address biodiversity loss and ecological tipping points. Further, we also define our current ability to adopt a widespread use of multilayer networks within ecology, evolution and conservation by providing examples of case-studies. We also assess which approaches are ready to be transferred and which ones require further development before use. We conclude that multilayer biological networks will be crucial to inform (using reliable multi-levels integrative indicators) stakeholders and support their decision-making concerning the sustainable use of resources and marine conservation.
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Affiliation(s)
- Diana Madeira
- Laboratory for Innovation and Sustainability of Marine Biological Resources (ECOMARE), Centre for Environmental and Marine Studies (CESAM), Department of Biology, University of Aveiro, Aveiro, Portugal.
| | - Carolina Madeira
- Applied Molecular Biosciences Unit, Department of Life Sciences, School of Science and Technology, NOVA University of Lisbon, Caparica, Portugal; i4HB - Institute for Health and Bioeconomy, School of Science and Technology, NOVA University of Lisbon, Caparica, Portugal
| | - Piero Calosi
- Laboratory of Marine Ecological and Evolutionary Physiology, Department of Biology, Chemistry and Geography, University of Quebec in Rimouski, 300 Allée des Ursulines, Rimouski, G5L 3A1, Québec, Canada
| | - Fanny Vermandele
- Laboratory of Marine Ecological and Evolutionary Physiology, Department of Biology, Chemistry and Geography, University of Quebec in Rimouski, 300 Allée des Ursulines, Rimouski, G5L 3A1, Québec, Canada
| | | | - Aura Barria-Araya
- Laboratory of Marine Ecological and Evolutionary Physiology, Department of Biology, Chemistry and Geography, University of Quebec in Rimouski, 300 Allée des Ursulines, Rimouski, G5L 3A1, Québec, Canada
| | - Remi Daigle
- Bedford Institute of Oceanography, Fisheries and Oceans Canada, Dartmouth, Nova Scotia, Canada; Marine Affairs Program, Dalhousie University, Halifax, Nova Scotia, Canada
| | | | - Timothée Poisot
- Department of Biological Sciences, University of Montreal, Montreal, Canada
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Herbillon F, Piou C, Meynard CN. An increase in management actions has compensated for past climate change effects on desert locust gregarization in western Africa. Heliyon 2024; 10:e29231. [PMID: 38644897 PMCID: PMC11033115 DOI: 10.1016/j.heliyon.2024.e29231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2023] [Revised: 04/01/2024] [Accepted: 04/03/2024] [Indexed: 04/23/2024] Open
Abstract
In response to high population density, the desert locust, Schistocerca gregaria, becomes gregarious and forms swarms that can cause significant damage to crops and pastures, threatening food security of human populations from western Africa to India. This switch from solitary to gregarious populations is highly dependent on favorable weather conditions. Climate change, which has been hypothesized to shift conditions towards increasing risks of gregarization, is therefore likely to have significant impacts on the spatial distribution and likelihood of outbreak events. However, the desert locust is intensely managed at large scales, which possibly counteracts any increased risk of outbreaks due to a more favorable climate. Consequently, understanding the changes in risks in the future involves teasing out the effects of climate change and management actions. Here we studied the dynamics of gregarization at the very early stages of potential outbreaks, in parallel with trends in climate and management, between 1985 and 2018 in western Africa. We used three different spatial scales, with the goal to have a better understanding of the potential effects of climate change per se while controlling for management. Our first approach was to look at a regional scale, where we observed an overall decrease in gregarization events. However, this scale includes very heterogeneous environments and management efforts. To consider this heterogeneity, we divided the area into a grid of 0.5° cells. For each cell, a climate analysis was performed for rainfall and temperature, with trends obtained by a harmonic decomposition model on monthly data. Analyses of gregarization showed only a few significant trends, both positive and negative, mainly found in western Mauritania where management effort has increased. To improve the statistical power, these cells were then grouped into larger homogeneous climatic clusters, i.e. groups of cells with similar climatic conditions and similar climatic trends over the study period. At this scale, gregarization events depend on the intersection between climate conditions and management efforts. The clusters where gregarization increased were also the ones with the highest increase of management. These results highlight the important effect of preventive management, which may counteract the positive effects of climate change on locust proliferation.
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Affiliation(s)
- Fanny Herbillon
- Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD), UMR Centre de Biologie pour la Gestion des Populations (CBGP), F-34398, Montpellier, France
- CBGP, Univ Montpellier, CIRAD, INRAE, Institut Agro, IRD, Montpellier, France
| | - Cyril Piou
- Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD), UMR Centre de Biologie pour la Gestion des Populations (CBGP), F-34398, Montpellier, France
- CBGP, Univ Montpellier, CIRAD, INRAE, Institut Agro, IRD, Montpellier, France
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6
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Cusson P, Pelletier F. Individual behaviour, growth, survival and vulnerability to hunting in a large mammal. Ecol Evol 2024; 14:e11003. [PMID: 38352198 PMCID: PMC10862178 DOI: 10.1002/ece3.11003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Accepted: 01/27/2024] [Indexed: 02/16/2024] Open
Abstract
Humans have exploited wild animals for thousands of years. Recent studies indicate that harvest-induced selection on life-history and morphological traits may lead to ecological and evolutionary changes. Less attention has been given to harvest-induced selection on behavioural traits, especially in terrestrial systems. We assessed in a wild population of large terrestrial mammals whether decades of hunting led to harvest-induced selection on trappability, a proxy of risk-taking behaviour. We investigated links between trappability, horn growth and survival across individuals in early life and quantified the correlations between early-life trappability and horn growth with availability to hunters and probability of being shot. We found positive among-individual correlations between early-life trappability and horn growth, early-life trappability and survival and early-life horn growth and survival. Faster growing individuals were more likely to be available to hunters and shot at a young age. We found no correlations between early-life trappability and availability to hunters or probability of being shot. Our results show that correlations between behaviour and growth can occur in wild terrestrial population but may be context dependent. This result highlights the difficulty in formulating general predictions about harvest-induced selection on behaviour, which can be affected by species ecology, harvesting regulations and harvesting methods used. Future studies should investigate mechanisms linking physiological, behavioural and morphological traits and how this effects harvest vulnerability to evaluate the potential for harvest to drive selection on behaviour in wild animal populations.
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Affiliation(s)
| | - Fanie Pelletier
- Département de BiologieUniversité de SherbrookeSherbrookeQuébecCanada
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Wilk-da-Silva R, Medeiros-Sousa AR, Mucci LF, Alonso DP, Alvarez MVN, Ribolla PEM, Marrelli MT. Genetic Structuring of One of the Main Vectors of Sylvatic Yellow Fever: Haemagogus ( Conopostegus) leucocelaenus (Diptera: Culicidae). Genes (Basel) 2023; 14:1671. [PMID: 37761811 PMCID: PMC10531017 DOI: 10.3390/genes14091671] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 08/18/2023] [Accepted: 08/22/2023] [Indexed: 09/29/2023] Open
Abstract
Genetic diversity and population structuring for the species Haemogogus leucocelaenus, a sylvatic vector of yellow fever virus, were found to vary with the degree of agricultural land use and isolation of fragments of Atlantic Forest in municipalities in the state of São Paulo where specimens were collected. Genotyping of 115 mitochondrial SNPs showed that the populations with the highest indices of genetic diversity (polymorphic loci and mean pairwise differences between the sequences) are found in areas with high levels of agricultural land use (northeast of the State). Most populations exhibited statistically significant negative values for the Tajima D and Fu FS neutrality tests, suggesting recent expansion. The results show an association between genetic diversity in this species and the degree of agricultural land use in the sampled sites, as well as signs of population expansion of this species in most areas, particularly those with the highest forest edge densities. A clear association between population structuring and the distance between the sampled fragments (isolation by distance) was observed: samples from a large fragment of Atlantic Forest extending along the coast of the state of São Paulo exhibited greater similarity with each other than with populations in the northwest of the state.
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Affiliation(s)
- Ramon Wilk-da-Silva
- Institute of Tropical Medicine, University of São Paulo, São Paulo 05403-000, Brazil
| | - Antônio Ralph Medeiros-Sousa
- Department of Epidemiology, School of Public Health, University of São Paulo, São Paulo 01246-904, Brazil; (A.R.M.-S.); (D.P.A.)
| | - Luis Filipe Mucci
- State Department of Health, Pasteur Institute, São Paulo 01027-000, Brazil;
| | - Diego Peres Alonso
- Department of Epidemiology, School of Public Health, University of São Paulo, São Paulo 01246-904, Brazil; (A.R.M.-S.); (D.P.A.)
- UNESP—Biotechnology Institute and Biosciences Institute, Sao Paulo State University, Botucatu 18618-689, Brazil; (M.V.N.A.); (P.E.M.R.)
| | - Marcus Vinicius Niz Alvarez
- UNESP—Biotechnology Institute and Biosciences Institute, Sao Paulo State University, Botucatu 18618-689, Brazil; (M.V.N.A.); (P.E.M.R.)
| | - Paulo Eduardo Martins Ribolla
- UNESP—Biotechnology Institute and Biosciences Institute, Sao Paulo State University, Botucatu 18618-689, Brazil; (M.V.N.A.); (P.E.M.R.)
| | - Mauro Toledo Marrelli
- Institute of Tropical Medicine, University of São Paulo, São Paulo 05403-000, Brazil
- Department of Epidemiology, School of Public Health, University of São Paulo, São Paulo 01246-904, Brazil; (A.R.M.-S.); (D.P.A.)
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Alves JMC, Nagatani VH, Silva OGM, Ramalho MO, Gonçalves Paterson Fox E, Fernando de Souza R, Yumi Kayano D, Wagner Silva Hilsdorf A, Harakava R, de Castro Morini MS. Hitting the Road: Haplotype Diversity of Fire Ants Nesting on Disturbed Atlantic Forest Habitats. NEOTROPICAL ENTOMOLOGY 2023:10.1007/s13744-023-01048-y. [PMID: 37310662 DOI: 10.1007/s13744-023-01048-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Subscribe] [Scholar Register] [Received: 08/26/2022] [Accepted: 04/25/2023] [Indexed: 06/14/2023]
Abstract
Ants of the genus Solenopsis are globally distributed, presenting high diversity and many generalist species. In South America, the dominant species is Solenopsis saevissima (Smith, 1855), commonly found nesting in grassy fields surrounding humanized areas. In spite of being so common, there has been no research evaluating the effect of human disturbances on the mitochondrial DNA (mtDNA) haplotype diversity in this species. In this context, we here characterized the mtDNA haplotype diversity in S. saevissima nests by highway roadsides, dust roads, and forest borders of Atlantic Forest, based on partial sequences of cytochrome c oxidase subunit I (COI). Based on the facts that the species is a rapid colonizer of disturbed habitats, we specifically probed how the genetic diversity of native S. saevissima is impacted by highways and roads infrastructure expanding around the rainforest. Species diagnosis was established both by morphological characters and obtained mtDNA COI sequences. Overall, the species exhibited high haplotypes and nucleotide diversity, particularly around forest borders; though all haplotypes seemed closely related across the different habitats. We identified seven mitochondrial haplotypes (H1 to H7), where haplotype H1 was exclusively found in highway roadside nests, and H7 on dust roads; the remaining haplotypes were recorded from all habitats. Haplotype H1 was geographically isolated to the south of the Atlantic Forest, supporting previous suggestions that it acts as a biogeographical barrier. The pattern is suggestive of a recent species expansion, probably resulting from extensive habitat fragmentation. Taken together, our data demonstrates fire ant haplotypes prevailing in some anthropized habitats, characterizing how a native species lining the remnants of the Brazilian Atlantic Forest might be a concern for environmental conservation.
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Affiliation(s)
- Juliana Maria Conceição Alves
- Laboratório de Mirmecologia do Alto Tietê - Núcleo de Ciências Ambientais, Universidade de Mogi das Cruzes, Mogi das Cruzes, São Paulo, Brazil.
| | - Victor Hideki Nagatani
- Laboratório de Mirmecologia do Alto Tietê - Núcleo de Ciências Ambientais, Universidade de Mogi das Cruzes, Mogi das Cruzes, São Paulo, Brazil
| | | | | | | | - Rodrigo Fernando de Souza
- Laboratório de Mirmecologia do Alto Tietê - Núcleo de Ciências Ambientais, Universidade de Mogi das Cruzes, Mogi das Cruzes, São Paulo, Brazil
| | - Debora Yumi Kayano
- Laboratório de Mirmecologia do Alto Tietê - Núcleo de Ciências Ambientais, Universidade de Mogi das Cruzes, Mogi das Cruzes, São Paulo, Brazil
| | - Alexandre Wagner Silva Hilsdorf
- Laboratório de Genética de Organismos Aquáticos e Aquicultura - Núcleo Integrado de Biotecnologia, Universidade de Mogi das Cruzes, Av. Doutor Cândido Xavier de Almeida e Souza, 200, Mogi das Cruzes, São Paulo, Brazil
| | - Ricardo Harakava
- Unidade Laboratorial de Referência em Biologia Molecular Aplicada, Instituto Biológico, São Paulo, São Paulo, Brazil
| | - Maria Santina de Castro Morini
- Laboratório de Mirmecologia do Alto Tietê - Núcleo de Ciências Ambientais, Universidade de Mogi das Cruzes, Mogi das Cruzes, São Paulo, Brazil
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Hughes A, Auliya M, Altherr S, Scheffers B, Janssen J, Nijman V, Shepherd CR, D'Cruze N, Sy E, Edwards DP. Determining the sustainability of legal wildlife trade. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 341:117987. [PMID: 37178541 DOI: 10.1016/j.jenvman.2023.117987] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Revised: 03/19/2023] [Accepted: 04/18/2023] [Indexed: 05/15/2023]
Abstract
Exploitation of wildlife represents one of the greatest threats to species survival according to the Intergovernmental Science-Policy Platform on Biodiversity and Ecosystem Services. Whilst detrimental impacts of illegal trade are well recognised, legal trade is often equated to being sustainable despite the lack of evidence or data in the majority of cases. We review the sustainability of wildlife trade, the adequacy of tools, safeguards, and frameworks to understand and regulate trade, and identify gaps in data that undermine our ability to truly understand the sustainability of trade. We provide 183 examples showing unsustainable trade in a broad range of taxonomic groups. In most cases, neither illegal nor legal trade are supported by rigorous evidence of sustainability, with the lack of data on export levels and population monitoring data precluding true assessments of species or population-level impacts. We propose a more precautionary approach to wildlife trade and monitoring that requires those who profit from trade to provide proof of sustainability. We then identify four core areas that must be strengthened to achieve this goal: (1) rigorous data collection and analyses of populations; (2) linking trade quotas to IUCN and international accords; (3) improved databases and compliance of trade; and (4) enhanced understanding of trade bans, market forces, and species substitutions. Enacting these core areas in regulatory frameworks, including CITES, is essential to the continued survival of many threatened species. There are no winners from unsustainable collection and trade: without sustainable management not only will species or populations become extinct, but communities dependent upon these species will lose livelihoods.
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Affiliation(s)
- Alice Hughes
- School of Biological Sciences, University of Hong Kong, China.
| | - Mark Auliya
- Department of Herpetology, Leibniz Institute for the Analysis of Biodiversity Change, Zoological Research Museum Alexander Koenig, Bonn, Germany
| | | | - Brett Scheffers
- Department of Wildlife Ecology and Conservation, University of Florida/IFAS, Gainesville, FL, USA
| | - Jordi Janssen
- Monitor Conservation Research Society, PO BOX 200, Big Lake Ranch, BC, V0L 1G0, Canada
| | - Vincent Nijman
- Oxford Wildlife Trade Research Group, Oxford Brookes University, Oxford, OX3 0BP, UK.
| | - Chris R Shepherd
- Monitor Conservation Research Society, PO BOX 200, Big Lake Ranch, BC, V0L 1G0, Canada
| | - Neil D'Cruze
- The Wildlife Conservation Research Unit, Department of Zoology, University of Oxford, Tubney, UK; World Animal Protection, 222 Greys Inn Road, London, WC1X 8HB, UK
| | - Emerson Sy
- Philippine Center for Terrestrial & Aquatic Research, Manila, Philippines
| | - David P Edwards
- Ecology and Evolutionary Biology, School of Biosciences University of Sheffield, Sheffield, S10 2TN, UK.
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10
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Anatomical variations of the flexor carpi ulnaris in the fetal period. ANTHROPOLOGICAL REVIEW 2023. [DOI: 10.18778/1898-6773.85.4.09] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Abstract
Introduction: The Flexor Carpi Ulnaris (FCU) is a part of the palmar the forearm muscle group and one of the most important muscles for upper limb functioning - is responsible for flexion and adduction of the hand at the radio-carpal joint. There are clinically significant but rare anatomical variations of FCU. The variability of the FCU has not been described up to now, and no typology of the muscle based on its more variable terminal attachment has been created.
Aim of the study: Determination of FCU muscle typology based on available fetal material.
Material and methods: A total of 114 human fetuses (53 female, 61 male) between 117 and 197 days of fetal life were eligible for the study. Preparations were carried out using classical anatomical techniques based on a previously published procedure. Thanks to that significant anthropometric landmarks were visible for the gathering of metric measurements. Metric measurements were taken and statistically analysed using R-Project software.
Results: A new typology was created based on variable muscle insertions. Additionally, the presence of an atypically located, additional, separated muscle belly was described. A comparison of measurements of the left upper limb in relation to the right upper limb showed significant differences for forearm length to the anthropometric point of the stylion radiale, limb length, total FCU length and FCU length which means that the left limb is longer than the right limb. A comparison of FCU insertion types between left and right upper limb showed there’s no significant difference between counts of each type.
Conclusion: The FCU is a muscle that is easy to palpate and may therefore act as a topographical marker for healthcare professionals. Knowledge of its variability is not only of theoretical importance but also has clinical significance. The current publication demonstrates presence of variability in FCU terminal attachment. Certainly, this topic requires further research and continued work on a detailed understanding of forearm anatomy in the fetal period.
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11
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Nieto-Blázquez ME, Schreiber D, Mueller SA, Koch K, Nowak C, Pfenninger M. Human impact on the recent population history of the elusive European wildcat inferred from whole genome data. BMC Genomics 2022; 23:709. [PMID: 36258177 PMCID: PMC9578205 DOI: 10.1186/s12864-022-08930-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Accepted: 10/07/2022] [Indexed: 01/13/2023] Open
Abstract
BACKGROUND The extent and impact of evolutionary change occurring in natural populations in response to rapid anthropogenic impact is still poorly understood on the genome-wide level. Here, we explore the genetic structure, demographic history, population differentiation, and domestic introgression based on whole genome data of the endangered European wildcat in Germany, to assess potential genomic consequences of the species' recent spread across human-dominated cultural landscapes. RESULTS Reconstruction of demographic history and introgression rates based on 47 wildcat and 37 domestic cat genomes suggested late introgression between wild and domestic cat, coinciding with the introduction of domestic cat during the Roman period, but overall relatively low rates of hybridization and introgression from domestic cats. Main population divergence found between an eastern and central German wildcat clade was found to be of rather recent origin (200 y), and thus the likely consequence of anthropogenic persecution and resulting isolation in population refugia. We found similar effective population sizes and no substantial inbreeding across populations. Interestingly, highly differentiated genes between wild cat populations involved in the tryptophan-kynurenine-serotonin pathway were revealed, which plays a role in behavioral processes such as stress susceptibility and tolerance, suggesting that differential selection acted in the populations. CONCLUSIONS We found strong evidence for substantial recent anthropogenic impact on the genetic structure of European wildcats, including recent persecution-driven population divergence, as well as potential adaptation to human-dominate environments. In contrast, the relatively low levels of domestic introgression and inbreeding found in this study indicate a substantial level of "resistance" of this elusive species towards major anthropogenic impacts, such as the omnipresence of domestic cats as well as substantial habitat fragmentation. While those findings have strong implications for ongoing conservation strategies, we demand closer inspection of selective pressures acting on this and other wildlife species in anthropogenic environments.
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Affiliation(s)
- María Esther Nieto-Blázquez
- Molecular Ecology Group, Senckenberg Biodiversity and Climate Research Centre (SBiK-F), 60325, Frankfurt am Main, Germany.
| | - Dennis Schreiber
- Molecular Ecology Group, Senckenberg Biodiversity and Climate Research Centre (SBiK-F), 60325, Frankfurt am Main, Germany
| | - Sarah A Mueller
- Division of Evolutionary Biology, Faculty of Biology, Ludwig Maximilian University of Munich, Planegg-Martinsried 82152, Munich, Germany
- Centre for Wildlife Genetics, Senckenberg Research Institute and Natural History Museum Frankfurt, 63571, Gelnhausen, Germany
| | - Katrin Koch
- European Wildcat Monitoring, Bund Für Umwelt Und Naturschutz, Rheinland-Pfalz, 55118, Mainz, Germany
| | - Carsten Nowak
- Centre for Wildlife Genetics, Senckenberg Research Institute and Natural History Museum Frankfurt, 63571, Gelnhausen, Germany
- LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), 60325, Frankfurt am Main, Germany
| | - Markus Pfenninger
- Molecular Ecology Group, Senckenberg Biodiversity and Climate Research Centre (SBiK-F), 60325, Frankfurt am Main, Germany
- LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), 60325, Frankfurt am Main, Germany
- Institute for Molecular and Organismic Evolution, Johannes Gutenberg University, 55128, Mainz, Germany
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12
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Mai S, Berthoud JL, Haag H, Woog F. Factors limiting reproductive success in urban Greylag Geese ( Anser anser). PeerJ 2022; 10:e13685. [PMID: 35945936 PMCID: PMC9357368 DOI: 10.7717/peerj.13685] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2022] [Accepted: 06/14/2022] [Indexed: 01/17/2023] Open
Abstract
In the late eighties, Greylag Geese (Anser anser) started to colonise an urban area previously void of geese in southwestern Germany. Between 2004 and 2020, in a period of steady population increase with subsequent population stagnation, we analysed two measures of reproductive success: (1) the relation between freshly hatched to fledged young for each brood and (2) the probability of a hatchling to survive to fledging. We were able to show that the dispersal of pairs from the nesting site to a different brood rearing area resulted in higher reproductive success. However, the increasing population size of Greylag Geese and the number of breeding pairs of recently immigrated Egyptian Geese (Alopochen aegyptiaca) had a negative impact on reproductive success, indicating density dependence. Our results show that newly established populations in urban settings do not grow indefinitely, which is an important fact that should be taken into account by wildlife managers.
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Affiliation(s)
- Sabrina Mai
- Department of Zoology, State Museum of Natural History Stuttgart, Stuttgart, Germany,Center of Excellence for Biodiversity and Integrative Taxonomy, University of Hohenheim, Stuttgart, Germany
| | | | - Holger Haag
- Department of Zoology, State Museum of Natural History Stuttgart, Stuttgart, Germany
| | - Friederike Woog
- Department of Zoology, State Museum of Natural History Stuttgart, Stuttgart, Germany
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13
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Wolf JF, MacAulay KM, Kriss KD. Evaluating habitat selection models to predict critical habitat for mountain goats in northwest British Columbia. J Wildl Manage 2022. [DOI: 10.1002/jwmg.22229] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Jesse F. Wolf
- Ministry of Forests, Lands, and Natural Resource Operations, and Rural Development 3726 Alfred Avenue Smithers British Columbia V0J 2N0 Canada
| | - Kara M. MacAulay
- Ministry of Forests, Lands, and Natural Resource Operations, and Rural Development 3726 Alfred Avenue Smithers British Columbia V0J 2N0 Canada
| | - Krystal D. Kriss
- Ministry of Forests, Lands, and Natural Resource Operations, and Rural Development 3726 Alfred Avenue Smithers British Columbia V0J 2N0 Canada
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14
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Xiao S, Baik LS, Shang X, Carlson JR. Meeting a threat of the Anthropocene: Taste avoidance of metal ions by Drosophila. Proc Natl Acad Sci U S A 2022; 119:e2204238119. [PMID: 35700364 PMCID: PMC9231609 DOI: 10.1073/pnas.2204238119] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Accepted: 05/06/2022] [Indexed: 11/18/2022] Open
Abstract
The Anthropocene Epoch poses a critical challenge for organisms: they must cope with new threats at a rapid rate. These threats include toxic chemical compounds released into the environment by human activities. Here, we examine elevated concentrations of heavy metal ions as an example of anthropogenic stressors. We find that the fruit fly Drosophila avoids nine metal ions when present at elevated concentrations that the flies experienced rarely, if ever, until the Anthropocene. We characterize the avoidance of feeding and egg laying on metal ions, and we identify receptors, neurons, and taste organs that contribute to this avoidance. Different subsets of taste receptors, including members of both Ir (Ionotropic receptor) and Gr (Gustatory receptor) families contribute to the avoidance of different metal ions. We find that metal ions activate certain bitter-sensing neurons and inhibit sugar-sensing neurons. Some behavioral responses are mediated largely through neurons of the pharynx. Feeding avoidance remains stable over 10 generations of exposure to copper and zinc ions. Some responses to metal ions are conserved across diverse dipteran species, including the mosquito Aedes albopictus. Our results suggest mechanisms that may be essential to insects as they face challenges from environmental changes in the Anthropocene.
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Affiliation(s)
- Shuke Xiao
- Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06511
| | - Lisa S. Baik
- Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06511
| | - Xueying Shang
- Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06511
| | - John R. Carlson
- Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06511
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15
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Hohwieler KR, Villiers DL, Cristescu RH, Frere CH. Genetic erosion detected in a specialist mammal living in a fast‐developing environment. CONSERVATION SCIENCE AND PRACTICE 2022. [DOI: 10.1111/csp2.12738] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Affiliation(s)
- Katrin R. Hohwieler
- Global Change Ecology Research Group University of the Sunshine Coast, School of Science, Technology and Engineering Sippy Down Queensland Australia
| | | | - Romane H. Cristescu
- Global Change Ecology Research Group University of the Sunshine Coast, School of Science, Technology and Engineering Sippy Down Queensland Australia
| | - Celine H. Frere
- School of Biological Sciences University of Queensland St Lucia QLD Australia
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16
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Bonnet T, Morrissey MB, de Villemereuil P, Alberts SC, Arcese P, Bailey LD, Boutin S, Brekke P, Brent LJN, Camenisch G, Charmantier A, Clutton-Brock TH, Cockburn A, Coltman DW, Courtiol A, Davidian E, Evans SR, Ewen JG, Festa-Bianchet M, de Franceschi C, Gustafsson L, Höner OP, Houslay TM, Keller LF, Manser M, McAdam AG, McLean E, Nietlisbach P, Osmond HL, Pemberton JM, Postma E, Reid JM, Rutschmann A, Santure AW, Sheldon BC, Slate J, Teplitsky C, Visser ME, Wachter B, Kruuk LEB. Genetic variance in fitness indicates rapid contemporary adaptive evolution in wild animals. Science 2022; 376:1012-1016. [PMID: 35617403 DOI: 10.1126/science.abk0853] [Citation(s) in RCA: 51] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
The rate of adaptive evolution, the contribution of selection to genetic changes that increase mean fitness, is determined by the additive genetic variance in individual relative fitness. To date, there are few robust estimates of this parameter for natural populations, and it is therefore unclear whether adaptive evolution can play a meaningful role in short-term population dynamics. We developed and applied quantitative genetic methods to long-term datasets from 19 wild bird and mammal populations and found that, while estimates vary between populations, additive genetic variance in relative fitness is often substantial and, on average, twice that of previous estimates. We show that these rates of contemporary adaptive evolution can affect population dynamics and hence that natural selection has the potential to partly mitigate effects of current environmental change.
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Affiliation(s)
- Timothée Bonnet
- Research School of Biology, Australian National University, Canberra, ACT, Australia
| | | | - Pierre de Villemereuil
- Institut de Systématique, Évolution, Biodiversité (ISYEB), École Pratique des Hautes Études, PSL, MNHN, CNRS, SU, UA, Paris, France.,School of Biological Sciences, University of Auckland, Auckland, New Zealand
| | - Susan C Alberts
- Departments of Biology and Evolutionary Anthropology, Duke University, Durham, NC, USA
| | - Peter Arcese
- Forest and Conservation Sciences, University of British Columbia, Vancouver, British Columbia, Canada
| | - Liam D Bailey
- Departments of Evolutionary Ecology and Evolutionary Genetics, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany
| | - Stan Boutin
- Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada
| | - Patricia Brekke
- Institute of Zoology, Zoological Society of London, Regents Park, London, UK
| | - Lauren J N Brent
- Centre for Research in Animal Behaviour, University of Exeter, Penryn, UK
| | - Glauco Camenisch
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland
| | - Anne Charmantier
- Centre d'Écologie Fonctionnelle et Évolutive, Université de Montpellier, CNRS, EPHE, IRD, Montpellier, France
| | - Tim H Clutton-Brock
- Department of Zoology, University of Cambridge, Cambridge, UK.,Mammal Research Institute, University of Pretoria, Pretoria, South Africa
| | - Andrew Cockburn
- Research School of Biology, Australian National University, Canberra, ACT, Australia
| | - David W Coltman
- Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada
| | - Alexandre Courtiol
- Departments of Evolutionary Ecology and Evolutionary Genetics, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany
| | - Eve Davidian
- Departments of Evolutionary Ecology and Evolutionary Genetics, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany
| | - Simon R Evans
- Edward Grey Institute, Department of Zoology, University of Oxford, Oxford, UK.,Department of Ecology and Genetics, Uppsala University, Uppsala, Sweden.,Centre for Ecology and Conservation, University of Exeter, Penryn, UK
| | - John G Ewen
- Institute of Zoology, Zoological Society of London, Regents Park, London, UK
| | | | - Christophe de Franceschi
- Centre d'Écologie Fonctionnelle et Évolutive, Université de Montpellier, CNRS, EPHE, IRD, Montpellier, France
| | - Lars Gustafsson
- Department of Ecology and Genetics, Uppsala University, Uppsala, Sweden
| | - Oliver P Höner
- Departments of Evolutionary Ecology and Evolutionary Genetics, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany
| | - Thomas M Houslay
- Department of Zoology, University of Cambridge, Cambridge, UK.,Centre for Ecology and Conservation, University of Exeter, Penryn, UK
| | - Lukas F Keller
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland.,Zoological Museum, University of Zurich,, Zurich, Switzerland
| | - Marta Manser
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland.,Mammal Research Institute, University of Pretoria, Pretoria, South Africa
| | - Andrew G McAdam
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO, USA
| | - Emily McLean
- Biology Department, Oxford College, Emory University, Oxford, GA, USA
| | - Pirmin Nietlisbach
- School of Biological Sciences, Illinois State University, Normal, IL, USA
| | - Helen L Osmond
- Research School of Biology, Australian National University, Canberra, ACT, Australia
| | | | - Erik Postma
- Centre for Ecology and Conservation, University of Exeter, Penryn, UK
| | - Jane M Reid
- Centre for Biodiversity Dynamics, Norwegian University of Science and Technology (NTNU), Trondheim, Norway.,School of Biological Sciences, University of Aberdeen, Aberdeen, UK
| | - Alexis Rutschmann
- School of Biological Sciences, University of Auckland, Auckland, New Zealand
| | - Anna W Santure
- School of Biological Sciences, University of Auckland, Auckland, New Zealand
| | - Ben C Sheldon
- Edward Grey Institute, Department of Zoology, University of Oxford, Oxford, UK
| | - Jon Slate
- Ecology and Evolutionary Biology, School of Biosciences, University of Sheffield, Sheffield, UK
| | - Céline Teplitsky
- Centre d'Écologie Fonctionnelle et Évolutive, Université de Montpellier, CNRS, EPHE, IRD, Montpellier, France
| | - Marcel E Visser
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, Netherlands
| | - Bettina Wachter
- Departments of Evolutionary Ecology and Evolutionary Genetics, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany
| | - Loeske E B Kruuk
- Research School of Biology, Australian National University, Canberra, ACT, Australia.,Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK
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17
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Therkildsen NO, Pinsky ML. A long evolutionary reach for fishing nets. Science 2022; 376:344-345. [PMID: 35446662 DOI: 10.1126/science.abo6512] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
Earlier maturation of Atlantic salmon is linked to indirect effects of fisheries on its prey.
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Affiliation(s)
| | - Malin L Pinsky
- Department of Ecology, Evolution, and Natural Resources, Rutgers University, New Brunswick, NJ, USA
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18
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Sanderson S, Beausoleil MO, O'Dea RE, Wood ZT, Correa C, Frankel V, Gorné LD, Haines GE, Kinnison MT, Oke KB, Pelletier F, Pérez-Jvostov F, Reyes-Corral WD, Ritchot Y, Sorbara F, Gotanda KM, Hendry AP. The pace of modern life, revisited. Mol Ecol 2021; 31:1028-1043. [PMID: 34902193 DOI: 10.1111/mec.16299] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Revised: 11/15/2021] [Accepted: 11/22/2021] [Indexed: 12/28/2022]
Abstract
Wild populations must continuously respond to environmental changes or they risk extinction. Those responses can be measured as phenotypic rates of change, which can allow us to predict contemporary adaptive responses, some of which are evolutionary. About two decades ago, a database of phenotypic rates of change in wild populations was compiled. Since then, researchers have used (and expanded) this database to examine phenotypic responses to specific types of human disturbance. Here, we update the database by adding 5675 new estimates of phenotypic change. Using this newer version of the data base, now containing 7338 estimates of phenotypic change, we revisit the conclusions of four published articles. We then synthesize the expanded database to compare rates of change across different types of human disturbance. Analyses of this expanded database suggest that: (i) a small absolute difference in rates of change exists between human disturbed and natural populations, (ii) harvesting by humans results in higher rates of change than other types of disturbance, (iii) introduced populations have increased rates of change, and (iv) body size does not increase through time. Thus, findings from earlier analyses have largely held-up in analyses of our new database that encompass a much larger breadth of species, traits, and human disturbances. Lastly, we use new analyses to explore how various types of human disturbances affect rates of phenotypic change, and we call for this database to serve as a steppingstone for further analyses to understand patterns of contemporary phenotypic change.
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Affiliation(s)
- Sarah Sanderson
- Department of Biology and Redpath Museum, McGill University, Montréal, Québec, Canada
| | | | - Rose E O'Dea
- Department of Biology and Redpath Museum, McGill University, Montréal, Québec, Canada.,Evolution & Ecology Research Centre, UNSW, Sydney, New South Wales, Australia
| | - Zachary T Wood
- School of Biology and Ecology and Maine Center for Genetics in the Environment, University of Maine, Orono, Maine, USA
| | - Cristian Correa
- Facultad de Ciencias Forestales y Recursos Naturales, Instituto de Conservación Biodiversidad y Territorio, Universidad Austral de Chile, Valdivia, Chile.,Centro de Humedales Río Cruces, Universidad Austral de Chile, Valdivia, Chile
| | - Victor Frankel
- Department of Biology and Redpath Museum, McGill University, Montréal, Québec, Canada
| | - Lucas D Gorné
- Department of Biology and Redpath Museum, McGill University, Montréal, Québec, Canada.,Facultad de Ciencias Exactas Físicas y Naturales, Universidad Nacional de Córdoba, Córdoba, Argentina.,Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, IMBiV, Córdoba, Argentina.,Department of Biological Sciences, Brock University, St. Catharines, Ontario, Canada.,Département de Biologie, Université de Sherbrooke, Sherbrooke, Quebec, Canada
| | - Grant E Haines
- Department of Biology and Redpath Museum, McGill University, Montréal, Québec, Canada
| | - Michael T Kinnison
- School of Biology and Ecology and Maine Center for Genetics in the Environment, University of Maine, Orono, Maine, USA
| | - Krista B Oke
- College of Fisheries and Ocean Sciences, University of Alaska Fairbanks, Juneau, Alaska, USA
| | - Fanie Pelletier
- College of Fisheries and Ocean Sciences, University of Alaska Fairbanks, Juneau, Alaska, USA
| | - Felipe Pérez-Jvostov
- Department of Biology and Redpath Museum, McGill University, Montréal, Québec, Canada
| | - Winer D Reyes-Corral
- Department of Biology and Redpath Museum, McGill University, Montréal, Québec, Canada
| | - Yanny Ritchot
- College of Fisheries and Ocean Sciences, University of Alaska Fairbanks, Juneau, Alaska, USA
| | - Freedom Sorbara
- Department of Biology and Redpath Museum, McGill University, Montréal, Québec, Canada
| | - Kiyoko M Gotanda
- Department of Biological Sciences, Brock University, St. Catharines, Ontario, Canada.,Département de Biologie, Université de Sherbrooke, Sherbrooke, Quebec, Canada
| | - Andrew P Hendry
- Department of Biology and Redpath Museum, McGill University, Montréal, Québec, Canada
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19
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Santi F, Vella E, Jeffress K, Deacon A, Riesch R. Phenotypic responses to oil pollution in a poeciliid fish. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 290:118023. [PMID: 34461415 DOI: 10.1016/j.envpol.2021.118023] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2021] [Revised: 08/05/2021] [Accepted: 08/20/2021] [Indexed: 06/13/2023]
Abstract
Pollution damages ecosystems around the globe and some forms of pollution, like oil pollution, can be either man-made or derived from natural sources. Despite the pervasiveness of oil pollution, certain organisms are able to colonise polluted or toxic environments, yet we only have a limited understanding of how they are affected by it. Here, we analysed phenotypic responses to oil pollution in guppies (Poecilia reticulata) living in oil-polluted habitats across southern Trinidad. We analysed body-shape and life-history traits for 352 individuals from 11 independent populations, six living in oil-polluted environments (including the naturally oil-polluted Pitch Lake), and five stemming from non-polluted habitats. Based on theory of, and previous studies on, responses to environmental stressors, we predicted guppies from oil-polluted waters to have larger heads and shallower bodies, to be smaller, to invest more into reproduction, and to produce more but smaller offspring compared to guppies from non-polluted habitats. Contrary to most of our predictions, we uncovered strong population-specific variation regardless of the presence of oil pollution. Moreover, guppies from oil-polluted habitats were characterised by increased body size; rounder, deeper bodies with increased head size; and increased offspring size, when compared to their counterparts from non-polluted sites. This suggests that guppies in oil-polluted environments are not only subject to the direct negative effects of oil pollution, but might gain some (indirect) benefits from other concomitant environmental factors, such as reduced predation and reduced parasite load. Our results extend our knowledge of organismal responses to oil pollution and highlight the importance of anthropogenic pollution as a source of environmental variation. They also emphasise the understudied ecological heterogeneity of extreme environments.
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Affiliation(s)
- Francesco Santi
- Department of Biological Sciences, Royal Holloway University of London, Egham, UK.
| | - Emily Vella
- Department of Biological Sciences, Royal Holloway University of London, Egham, UK
| | - Katherine Jeffress
- Department of Biological Sciences, Royal Holloway University of London, Egham, UK
| | - Amy Deacon
- Department of Life Sciences, The University of the West Indies, St. Augustine, Trinidad and Tobago
| | - Rüdiger Riesch
- Department of Biological Sciences, Royal Holloway University of London, Egham, UK
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20
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Temporal and spatial variation in sex-specific abundance of the avian vampire fly (Philornis downsi). Parasitol Res 2021; 121:63-74. [PMID: 34799771 PMCID: PMC8748338 DOI: 10.1007/s00436-021-07350-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Accepted: 10/12/2021] [Indexed: 10/26/2022]
Abstract
Understanding the range and behaviour of an invasive species is critical to identify key habitat areas to focus control efforts. Patterns of range use in parasites can differ temporally, across life stages and between sexes. The invasive avian vampire fly, Philornis downsi, spends the larval stage of its life within bird nests, feeding on developing nestlings and causing high levels of mortality and deformation. However, little is known of the ecology and behaviour of the non-parasitic adult fly life stage. Here, we document sex-specific temporal and spatial patterns of abundance of adult avian vampire flies during a single Darwin's finch breeding season. We analyse fly trapping data collected across 7 weeks in the highlands (N = 405 flies) and lowlands (N = 12 flies) of Floreana Island (Galápagos). Lowland catches occurred later in the season, which supports the hypothesis that flies may migrate from the food-rich highlands to the food-poor lowlands once host breeding has commenced. Fly abundance was not correlated with host nesting density (oviposition site) but was correlated with distance to the agricultural zone (feeding site). We consistently caught more males closer to the agricultural zone and more females further away from the agricultural zone. These sex differences suggest that males may be defending or lekking at feeding sites in the agricultural zone for mating. This temporal and sex-specific habitat use of the avian vampire fly is relevant for developing targeted control methods and provides insight into the behavioural ecology of this introduced parasite on the Galápagos Archipelago.
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21
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Darimont CT, Pelletier F. Of war, tusks, and genes. Science 2021; 374:394-395. [PMID: 34672762 DOI: 10.1126/science.abm2980] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
[Figure: see text].
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Affiliation(s)
- Chris T Darimont
- Department of Geography, University of Victoria, Victoria, BC, Canada.,Raincoast Conservation Foundation, Bella Bella, BC, Canada
| | - Fanie Pelletier
- Département de Biologie, Université de Sherbrooke, Sherbrooke, QC, Canada
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22
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Baxter-Gilbert J, Riley JL, Measey J. Fortune favors the bold toad: urban-derived behavioral traits may provide advantages for invasive amphibian populations. Behav Ecol Sociobiol 2021. [DOI: 10.1007/s00265-021-03061-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/24/2023]
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23
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Abstract
Recent human activity has profoundly transformed Earth biomes on a scale and at rates that are unprecedented. Given the central role of symbioses in ecosystem processes, functions, and services throughout the Earth biosphere, the impacts of human-driven change on symbioses are critical to understand. Symbioses are not merely collections of organisms, but co-evolved partners that arise from the synergistic combination and action of different genetic programs. They function with varying degrees of permanence and selection as emergent units with substantial potential for combinatorial and evolutionary innovation in both structure and function. Following an articulation of operational definitions of symbiosis and related concepts and characteristics of the Anthropocene, we outline a basic typology of anthropogenic change (AC) and a conceptual framework for how AC might mechanistically impact symbioses with select case examples to highlight our perspective. We discuss surprising connections between symbiosis and the Anthropocene, suggesting ways in which new symbioses could arise due to AC, how symbioses could be agents of ecosystem change, and how symbioses, broadly defined, of humans and "farmed" organisms may have launched the Anthropocene. We conclude with reflections on the robustness of symbioses to AC and our perspective on the importance of symbioses as ecosystem keystones and the need to tackle anthropogenic challenges as wise and humble stewards embedded within the system.
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Affiliation(s)
- Erik F. Y. Hom
- Department of Biology and Center for Biodiversity and Conservation Research, University of Mississippi, University, MS 38677 USA
| | - Alexandra S. Penn
- Department of Sociology and Centre for Evaluation of Complexity Across the Nexus, University of Surrey, Guildford, Surrey, GU2 7XH UK
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Li Y, Shi LC, Cushman SA. Transcriptomic responses and physiological changes to cold stress among natural populations provide insights into local adaptation of weeping forsythia. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 165:94-103. [PMID: 34034164 DOI: 10.1016/j.plaphy.2021.05.020] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2021] [Accepted: 05/13/2021] [Indexed: 05/15/2023]
Abstract
Genetic mechanisms of species local adaptation are an emerging topic of great interest in evolutionary biology and molecular ecology. In this study, we compared the changes of physiological and phenotypic indexes and gene expression of four weeping forsythia populations under cold stress through a common garden experiment. Physiological and phenotypic results showed that there were differences in cold tolerance among populations. cold tolerance of high the latitude population (HBWZ) was the strongest, followed by the middle latitude population (SXWL), while the low latitude populations (SXHM) and (SXLJ) expressed the weakest cold tolerance. We identified significant differences in gene expression of cold tolerance related pathways and ontologies, including genes of oxylipin and isoquinoline alkaloid biosynthetic process, galactose, tyrosine and unsaturated fatty acids metabolism, among these populations under the same experimental temperature treatments. Even under the same degree of stress, there were notable differences in gene expression among natural populations. In this study, we present a working model of weeping forsythia populations which evolved in the context of different intensities of cold stress. Our study provides new insights for comprehending the genetic mechanisms of local adaptation for non-model species.
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Affiliation(s)
- Yong Li
- Innovation Platform of Molecular Biology, College of Landscape and Art, Henan Agricultural University, Zhengzhou, China.
| | - Long-Chen Shi
- Innovation Platform of Molecular Biology, College of Landscape and Art, Henan Agricultural University, Zhengzhou, China
| | - Samuel A Cushman
- U.S. Forest Service, Rocky Mountain Research Station, 2500 S. Pine Knoll Dr., Flagstaff, AZ, USA
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25
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Ritchot Y, Festa‐Bianchet M, Coltman D, Pelletier F. Determinants and long-term costs of early reproduction in males of a long-lived polygynous mammal. Ecol Evol 2021; 11:6829-6845. [PMID: 34141259 PMCID: PMC8207375 DOI: 10.1002/ece3.7530] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2021] [Accepted: 03/17/2021] [Indexed: 01/17/2023] Open
Abstract
In long-lived polygynous species, male reproductive success is often monopolized by a few mature dominant individuals. Young males are generally too small to be dominant and may employ alternative tactics; however, little is known about the determinants of reproductive success for young males. Understanding the causes and consequences of variability in early reproductive success may be crucial to assess the strength of sexual selection and possible long-term trade-offs among life-history traits. Selective pressures driven by fluctuating environmental conditions may depend on age class. We evaluated the determinants of reproduction in male bighorn sheep (Ovis canadensis) aged 2-4 years using 30 years of individual-level data. These young males cannot defend estrous ewes and use alternative mating tactics. We also investigated how the age of first detected reproduction was correlated to lifetime reproductive success and longevity. We found that reproductive success of males aged 3 years was positively correlated to body mass, to the proportion of males aged 2-4 years in the competitor pool, and to the number of females available per adult male. These results suggest that reproductive success depends on both competitive ability and population age-sex structure. None of these variables, however, had significant effects on the reproductive success of males aged 2 or 4 years. Known reproduction before the age of five increased lifetime reproductive success but decreased longevity, suggesting a long-term survival cost of early reproduction. Our analyses reveal that both individual-level phenotypic and population-level demographic variables influence reproductive success by young males and provide a rare assessment of fitness trade-offs in wild polygynous males.
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Affiliation(s)
- Yanny Ritchot
- Département de biologieUniversité de SherbrookeSherbrookeQCCanada
| | | | - David Coltman
- Department of Biological SciencesUniversity of AlbertaEdmontonABCanada
| | - Fanie Pelletier
- Département de biologieUniversité de SherbrookeSherbrookeQCCanada
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Wood ZT, Palkovacs EP, Olsen BJ, Kinnison MT. The Importance of Eco-evolutionary Potential in the Anthropocene. Bioscience 2021. [DOI: 10.1093/biosci/biab010] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Abstract
Humans are dominant global drivers of ecological and evolutionary change, rearranging ecosystems and natural selection. In the present article, we show increasing evidence that human activity also plays a disproportionate role in shaping the eco-evolutionary potential of systems—the likelihood of ecological change generating evolutionary change and vice versa. We suggest that the net outcome of human influences on trait change, ecology, and the feedback loops that link them will often (but not always) be to increase eco-evolutionary potential, with important consequences for stability and resilience of populations, communities, and ecosystems. We also integrate existing ecological and evolutionary metrics to predict and manage the eco-evolutionary dynamics of human-affected systems. To support this framework, we use a simple eco–evo feedback model to show that factors affecting eco-evolutionary potential are major determinants of eco-evolutionary dynamics. Our framework suggests that proper management of anthropogenic effects requires a science of human effects on eco-evolutionary potential.
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Affiliation(s)
- Zachary T Wood
- School of Biology and Ecology and with the Maine Center for Genetics in the Environment at the University of Maine, Orono, Maine, United States
| | - Eric P Palkovacs
- Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, California, United States
| | - Brian J Olsen
- School of Biology and Ecology and with the Maine Center for Genetics in the Environment at the University of Maine, Orono, Maine, United States
| | - Michael T Kinnison
- School of Biology and Ecology and with the Maine Center for Genetics in the Environment at the University of Maine, Orono, Maine, United States
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Norton BB, Norton SA. Lionfish envenomation in Caribbean and Atlantic waters: Climate change and invasive species. Int J Womens Dermatol 2021; 7:120-123. [PMID: 33537402 PMCID: PMC7838239 DOI: 10.1016/j.ijwd.2020.05.016] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2020] [Revised: 05/06/2020] [Accepted: 05/09/2020] [Indexed: 01/22/2023] Open
Abstract
The concept of emerging diseases is well understood; however, the concept of emerging injuries is not. We describe the introduction of two species of lionfish, native to the Indian and Pacific Oceans, into the warm shallow coastal waters of the Western Atlantic Ocean and the Caribbean Sea. Lionfish thrive in the same coastal waters that attract recreational swimmers, snorkelers, and divers. Because lionfish have ornate colors, people often swim close to have a better look. Lionfish have venomous spines and, in a defensive reaction, frequently envenomate curious humans. The fish are voracious predators and disrupt the coral ecosystems of the Atlantic. Furthermore, their range is spreading through a combination of lack of natural predators and the expansion of hospitable warm waters into higher latitudes as part of climate change.
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Affiliation(s)
- Benjamin B Norton
- Tulane University School of Medicine, New Orleans LA 70112, United States
| | - Scott A Norton
- The George Washington School of Medicine & Health Sciences, Washington, DC, United States
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29
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Quintela M, Richter‐Boix À, Bekkevold D, Kvamme C, Berg F, Jansson E, Dahle G, Besnier F, Nash RDM, Glover KA. Genetic response to human-induced habitat changes in the marine environment: A century of evolution of European sprat in Landvikvannet, Norway. Ecol Evol 2021; 11:1691-1718. [PMID: 33613998 PMCID: PMC7882954 DOI: 10.1002/ece3.7160] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Revised: 12/16/2020] [Accepted: 12/17/2020] [Indexed: 11/21/2022] Open
Abstract
Habitat changes represent one of the five most pervasive threats to biodiversity. However, anthropogenic activities also have the capacity to create novel niche spaces to which species respond differently. In 1880, one such habitat alterations occurred in Landvikvannet, a freshwater lake on the Norwegian coast of Skagerrak, which became brackish after being artificially connected to the sea. This lake is now home to the European sprat, a pelagic marine fish that managed to develop a self-recruiting population in barely few decades. Landvikvannet sprat proved to be genetically isolated from the three main populations described for this species; that is, Norwegian fjords, Baltic Sea, and the combination of North Sea, Kattegat, and Skagerrak. This distinctness was depicted by an accuracy self-assignment of 89% and a highly significant F ST between the lake sprat and each of the remaining samples (average of ≈0.105). The correlation between genetic and environmental variation indicated that salinity could be an important environmental driver of selection (3.3% of the 91 SNPs showed strong associations). Likewise, Isolation by Environment was detected for salinity, although not for temperature, in samples not adhering to an Isolation by Distance pattern. Neighbor-joining tree analysis suggested that the source of the lake sprat is in the Norwegian fjords, rather than in the Baltic Sea despite a similar salinity profile. Strongly drifted allele frequencies and lower genetic diversity in Landvikvannet compared with the Norwegian fjords concur with a founder effect potentially associated with local adaptation to low salinity. Genetic differentiation (F ST) between marine and brackish sprat is larger in the comparison Norway-Landvikvannet than in Norway-Baltic, which suggests that the observed divergence was achieved in Landvikvannet in some 65 generations, that is, 132 years, rather than gradually over thousands of years (the age of the Baltic Sea), thus highlighting the pace at which human-driven evolution can happen.
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Affiliation(s)
| | - Àlex Richter‐Boix
- CREAFCampus de BellaterraAutonomous University of BarcelonaBarcelonaSpain
| | - Dorte Bekkevold
- DTU‐Aqua National Institute of Aquatic ResourcesTechnical University of DenmarkSilkeborgDenmark
| | | | | | | | - Geir Dahle
- Institute of Marine ResearchBergenNorway
| | | | - Richard D. M. Nash
- Centre for EnvironmentFisheries and Aquaculture Science (Cefas)LowestoftUK
| | - Kevin A. Glover
- Institute of Marine ResearchBergenNorway
- Institute of BiologyUniversity of BergenBergenNorway
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Blumstein DT. The respect it deserves: Book review of Szulkin, M., J.Munshi‐South, and A.Charmantier, eds. 2020. Urban Evolutionary Biology. Oxford University Press, Oxford, 303 pp. ISBN 978‐0‐19‐883685‐8; $49.95 PB. Evolution 2020. [DOI: 10.1111/evo.14117] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Daniel T. Blumstein
- Department of Ecology and Evolutionary Biology University of California 621 Young Drive South Los Angeles CA 90095‐1606
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Harbers H, Zanolli C, Cazenave M, Theil JC, Ortiz K, Blanc B, Locatelli Y, Schafberg R, Lecompte F, Baly I, Laurens F, Callou C, Herrel A, Puymerail L, Cucchi T. Investigating the impact of captivity and domestication on limb bone cortical morphology: an experimental approach using a wild boar model. Sci Rep 2020; 10:19070. [PMID: 33149160 PMCID: PMC7643176 DOI: 10.1038/s41598-020-75496-6] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2020] [Accepted: 10/01/2020] [Indexed: 12/14/2022] Open
Abstract
The lack of bone morphological markers associated with the human control of wild animals has prevented the documentation of incipient animal domestication in archaeology. Here, we assess whether direct environmental changes (i.e. mobility reduction) could immediately affect ontogenetic changes in long bone structure, providing a skeletal marker of early domestication. We relied on a wild boar experimental model, analysing 24 wild-born specimens raised in captivity from 6 months to 2 years old. The shaft cortical thickness of their humerus was measured using a 3D morphometric mapping approach and compared with 23 free-ranging wild boars and 22 pigs from different breeds, taking into account sex, mass and muscle force differences. In wild boars we found that captivity induced an increase in cortical bone volume and muscle force, and a topographic change of cortical thickness associated with muscular expression along a phenotypic trajectory that differed from the divergence induced by selective breeding. These results provide an experimental proof of concept that changes in locomotor behaviour and selective breeding might be inferred from long bones morphology in the fossil and archaeological record. These trends need to be explored in the archaeological record and further studies are required to explore the developmental changes behind these plastic responses.
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Affiliation(s)
- Hugo Harbers
- Archéozoologie, Archéobotanique: Sociétés, Pratiques et Environnements, UMR 7209, Muséum national d'Histoire naturelle, CNRS, Paris, France.
| | - Clement Zanolli
- Laboratoire PACEA, UMR 5199, Université de Bordeaux, Bordeaux, France
| | - Marine Cazenave
- School of Anthropology and Conservation, Skeletal Biology Research Centre, University of Kent, Marlowe Building, Canterbury, Kent, CT2 7NR, UK
- Department of Anatomy and Histology, School of Medicine, Sefako Makgatho Health Sciences University, Pretoria, South Africa
| | - Jean-Christophe Theil
- Mécanismes Adaptatifs et Evolution, UMR 7109, Muséum national d'Histoire naturelle CNRS, Paris, France
| | - Katia Ortiz
- Réserve Zoologique de la Haute Touche, Muséum national d'Histoire naturelle, Obterre, France
| | - Barbara Blanc
- Réserve Zoologique de la Haute Touche, Muséum national d'Histoire naturelle, Obterre, France
| | - Yann Locatelli
- Réserve Zoologique de la Haute Touche, Muséum national d'Histoire naturelle, Obterre, France
- Physiologie de la Reproduction et des Comportements, UMR 7247, National Research Institute for Agriculture, Food and Environment (INRAE), CNRS Université de Tours IFCE, Nouzilly, France
| | - Renate Schafberg
- Central Natural Science Collections, Martin Luther University Halle-Wittenberg, Halle, Germany
| | - Francois Lecompte
- Plateforme CIRE, National Research Institute for Agriculture, Food and Environment (INRAE), Nouzilly, France
| | - Isabelle Baly
- Unité Bases de Données sur la Biodiversité, Écologie, Environnement et Sociétés, UMS 3468, Muséum national d'Histoire naturelle, Paris, France
| | - Flavie Laurens
- Unité Bases de Données sur la Biodiversité, Écologie, Environnement et Sociétés, UMS 3468, Muséum national d'Histoire naturelle, Paris, France
| | - Cécile Callou
- Unité Bases de Données sur la Biodiversité, Écologie, Environnement et Sociétés, UMS 3468, Muséum national d'Histoire naturelle, Paris, France
| | - Anthony Herrel
- Mécanismes Adaptatifs et Evolution, UMR 7109, Muséum national d'Histoire naturelle CNRS, Paris, France
| | - Laurent Puymerail
- Archéozoologie, Archéobotanique: Sociétés, Pratiques et Environnements, UMR 7209, Muséum national d'Histoire naturelle, CNRS, Paris, France
- Anthropologie bio-culturelle, droit, éthique et santé (ADES), UMR 7268, Faculté de Médecine Site Nord, Marseille, France
| | - Thomas Cucchi
- Archéozoologie, Archéobotanique: Sociétés, Pratiques et Environnements, UMR 7209, Muséum national d'Histoire naturelle, CNRS, Paris, France.
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32
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Multini LC, de Souza ALDS, Marrelli MT, Wilke ABB. The influence of anthropogenic habitat fragmentation on the genetic structure and diversity of the malaria vector Anopheles cruzii (Diptera: Culicidae). Sci Rep 2020; 10:18018. [PMID: 33093465 PMCID: PMC7581522 DOI: 10.1038/s41598-020-74152-3] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2019] [Accepted: 09/10/2020] [Indexed: 12/27/2022] Open
Abstract
Fragmentation of natural environments as a result of human interference has been associated with a decrease in species richness and increase in abundance of a few species that have adapted to these environments. The Brazilian Atlantic Forest, which has been undergoing an intense process of fragmentation and deforestation caused by human-made changes to the environment, is an important hotspot for malaria transmission. The main vector of simian and human malaria in this biome is the mosquito Anopheles cruzii. Anthropogenic processes reduce the availability of natural resources at the tree canopies, An. cruzii primary habitat. As a consequence, An. cruzii moves to the border of the Atlantic Forest nearing urban areas seeking resources, increasing their contact with humans in the process. We hypothesized that different levels of anthropogenic changes to the environment can be an important factor in driving the genetic structure and diversity in An. cruzii populations. Five different hypotheses using a cross-sectional and a longitudinal design were tested to assess genetic structure in sympatric An. cruzii populations and microevolutionary processes driving these populations. Single nucleotide polymorphisms were used to assess microgeographic genetic structure in An. cruzii populations in a low-endemicity area in the city of São Paulo, Brazil. Our results show an overall weak genetic structure among the populations, indicating a high gene flow system. However, our results also pointed to the presence of significant genetic structure between sympatric An. cruzii populations collected at ground and tree-canopy habitats in the urban environment and higher genetic variation in the ground-level population. This indicates that anthropogenic modifications leading to habitat fragmentation and a higher genetic diversity and structure in ground-level populations could be driving the behavior of An. cruzii, ultimately increasing its contact with humans. Understanding how anthropogenic changes in natural areas affect An. cruzii is essential for the development of more effective mosquito control strategies and, on a broader scale, for malaria-elimination efforts in the Brazilian Atlantic Forest.
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Affiliation(s)
- Laura Cristina Multini
- Department of Epidemiology, School of Public Health, University of São Paulo, São Paulo, SP, Brazil
| | | | - Mauro Toledo Marrelli
- Department of Epidemiology, School of Public Health, University of São Paulo, São Paulo, SP, Brazil
- São Paulo Institute of Tropical Medicine, University of São Paulo, São Paulo, SP, Brazil
| | - André Barretto Bruno Wilke
- Department of Epidemiology, School of Public Health, University of São Paulo, São Paulo, SP, Brazil.
- Department of Public Health Sciences, Miller School of Medicine, University of Miami, 1120 Northwest 14th Street, Miami, FL, 33136, USA.
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Weiskopf SR, Rubenstein MA, Crozier LG, Gaichas S, Griffis R, Halofsky JE, Hyde KJW, Morelli TL, Morisette JT, Muñoz RC, Pershing AJ, Peterson DL, Poudel R, Staudinger MD, Sutton-Grier AE, Thompson L, Vose J, Weltzin JF, Whyte KP. Climate change effects on biodiversity, ecosystems, ecosystem services, and natural resource management in the United States. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 733:137782. [PMID: 32209235 DOI: 10.1016/j.scitotenv.2020.137782] [Citation(s) in RCA: 177] [Impact Index Per Article: 35.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2019] [Revised: 02/28/2020] [Accepted: 03/05/2020] [Indexed: 05/22/2023]
Abstract
Climate change is a pervasive and growing global threat to biodiversity and ecosystems. Here, we present the most up-to-date assessment of climate change impacts on biodiversity, ecosystems, and ecosystem services in the U.S. and implications for natural resource management. We draw from the 4th National Climate Assessment to summarize observed and projected changes to ecosystems and biodiversity, explore linkages to important ecosystem services, and discuss associated challenges and opportunities for natural resource management. We find that species are responding to climate change through changes in morphology and behavior, phenology, and geographic range shifts, and these changes are mediated by plastic and evolutionary responses. Responses by species and populations, combined with direct effects of climate change on ecosystems (including more extreme events), are resulting in widespread changes in productivity, species interactions, vulnerability to biological invasions, and other emergent properties. Collectively, these impacts alter the benefits and services that natural ecosystems can provide to society. Although not all impacts are negative, even positive changes can require costly societal adjustments. Natural resource managers need proactive, flexible adaptation strategies that consider historical and future outlooks to minimize costs over the long term. Many organizations are beginning to explore these approaches, but implementation is not yet prevalent or systematic across the nation.
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Affiliation(s)
- Sarah R Weiskopf
- U.S. Geological Survey National Climate Adaptation Science Center, Reston, VA, USA.
| | | | - Lisa G Crozier
- NOAA Northwest Fisheries Science Center, Seattle, WA, USA
| | - Sarah Gaichas
- NOAA Northeast Fisheries Science Center, Woods Hole, MA, USA
| | - Roger Griffis
- NOAA National Marine Fisheries Service, Silver Spring, MD, USA
| | - Jessica E Halofsky
- University of Washington, School of Environmental and Forest Sciences, Seattle, WA, USA
| | | | - Toni Lyn Morelli
- U.S. Geological Survey Northeast Climate Adaptation Science Center, Amherst, MA, USA
| | - Jeffrey T Morisette
- U.S. Department of the Interior, National Invasive Species Council Secretariat, Fort Collins, CO, USA
| | - Roldan C Muñoz
- NOAA Southeast Fisheries Science Center, Beaufort, NC, USA
| | | | - David L Peterson
- University of Washington, School of Environmental and Forest Sciences, Seattle, WA, USA
| | | | - Michelle D Staudinger
- U.S. Geological Survey Northeast Climate Adaptation Science Center, Amherst, MA, USA
| | - Ariana E Sutton-Grier
- University of Maryland Earth System Science Interdisciplinary Center, College Park, MD, USA
| | - Laura Thompson
- U.S. Geological Survey National Climate Adaptation Science Center, Reston, VA, USA
| | - James Vose
- U.S. Forest Service Southern Research Station, Raleigh, NC, USA
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Ye B, Saito T, Hirano T, Dong Z, Do VT, Chiba S. Human-geographic effects on variations in the population genetics of Sinotaia quadrata (Gastropoda: Viviparidae) that historically migrated from continental East Asia to Japan. Ecol Evol 2020; 10:8055-8072. [PMID: 32788961 PMCID: PMC7417235 DOI: 10.1002/ece3.6456] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2020] [Revised: 05/06/2020] [Accepted: 05/11/2020] [Indexed: 11/12/2022] Open
Abstract
BACKGROUND Anthropogenic factors potentially affect observed biogeographical patterns in population genetics, but the effects of ancient human activities on the original patterns created by natural processes are unknown. Sinotaia quadrata, a widely distributed freshwater snail species in East Asia, was used to investigate this issue. It is unclear whether S. quadrata in Japan was introduced from China and how different human uses and varying geographic patterns affect the contemporary population genetics between the two regions. Thus, we investigated the demography of S. quadrata and detected its genetic structure in Japan and continental East Asia. RESULTS Sinotaia quadrata populations first naturally migrated from continental East Asia to Japan, which is associated with the ancient period in Japanese geohistory (about 70,000 years ago). They were then artificially introduced in association with agriculture expansion by human movements in two recent periods (about 8,000 and 1,200 years ago). Populations in different parts of Japan have their own sources. Natural migration in the ancient period and artificial introduction in the recent period suggest that the population distribution is affected by both the geohistory of East Asia and the history of human expansion. In the background of the historical migration and introduction, contemporary populations in the two regions show different genetic patterns. Population divergence levels were significantly correlated with geographical patterns in Japan and significantly correlated with human interventions variables in continental East Asia, suggesting that long-term geographical isolation is likely the major factor that shaped the contemporary population genetics in Japan, while modern human uses are likely the major factor in continental East Asia. CONCLUSIONS Our preliminary results show a complex demography and unusual genetic patterns in the contemporary populations for a common freshwater snail and are of significance to determine the historical formation and contemporary patterns of biogeography in Japan and continental East Asia.
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Affiliation(s)
- Bin Ye
- Graduate School of Life SciencesTohoku UniversitySendaiJapan
| | - Takumi Saito
- Department of BiologyFaculty of ScienceToho UniversityFunabashiJapan
| | - Takahiro Hirano
- Graduate School of Life SciencesTohoku UniversitySendaiJapan
- Center for Northeast Asian StudiesTohoku UniversitySendaiJapan
| | - Zhengzhong Dong
- Agricultural Experiment StationZhejiang UniversityHangzhouChina
| | - Van Tu Do
- Institute of Ecology and Biological ResourcesVietnam Academy of Science and TechnologyHa NoiVietnam
- Graduate University of Science and TechnologyVietnam Academy of Science and TechnologyHa NoiVietnam
| | - Satoshi Chiba
- Graduate School of Life SciencesTohoku UniversitySendaiJapan
- Center for Northeast Asian StudiesTohoku UniversitySendaiJapan
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Schultz AJ, Cristescu RH, Hanger J, Loader J, de Villiers D, Frère CH. Inbreeding and disease avoidance in a free-ranging koala population. Mol Ecol 2020; 29:2416-2430. [PMID: 32470998 DOI: 10.1111/mec.15488] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2019] [Accepted: 05/11/2020] [Indexed: 11/30/2022]
Abstract
Habitat destruction and fragmentation are increasing globally, forcing surviving species into small, isolated populations. Isolated populations typically experience heightened inbreeding risk and associated inbreeding depression and population decline; although individuals in these populations may mitigate these risks through inbreeding avoidance strategies. For koalas, as dietary specialists already under threat in the northern parts of their range, increased habitat fragmentation and associated inbreeding costs are of great conservation concern. Koalas are known to display passive inbreeding avoidance through sex-biased dispersal, although population isolation will reduce dispersal pathways. We tested whether free-ranging koalas display active inbreeding avoidance behaviours. We used VHF tracking data, parentage reconstruction, and veterinary examination results to test whether free-ranging female koalas avoid mating with (a) more closely related males; and (b) males infected with sexually transmitted Chlamydia pecorum. We found no evidence that female koalas avoid mating with relatively more related available mates. In fact, as the relatedness of potential mates increases, so did inbreeding events. We also found no evidence that female koalas can avoid mating with males infected with C. pecorum. The absence of active inbreeding avoidance mechanisms in koalas is concerning from a conservation perspective, as small, isolated populations may be at even higher risk of inbreeding depression than expected. At risk koala populations may require urgent conservation interventions to augment gene flow and reduce inbreeding risks. Similarly, if koalas are not avoiding mating with individuals with chlamydial disease, populations may be at higher risk from disease than anticipated, further impacting population viability.
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Affiliation(s)
- Anthony J Schultz
- Global Change Ecology Research Group, University of the Sunshine Coast, Sippy Downs, QLD, Australia
| | - Romane H Cristescu
- Global Change Ecology Research Group, University of the Sunshine Coast, Sippy Downs, QLD, Australia
| | - Jon Hanger
- Endeavour Veterinary Ecology Pty Ltd, Toorbul, QLD, Australia
| | - Jo Loader
- Endeavour Veterinary Ecology Pty Ltd, Toorbul, QLD, Australia
| | | | - Celine H Frère
- Global Change Ecology Research Group, University of the Sunshine Coast, Sippy Downs, QLD, Australia
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Rybak AV, Belykh ES, Maystrenko TA, Shadrin DM, Pylina YI, Chadin IF, Velegzhaninov IO. Genetic analysis in earthworm population from area contaminated with radionuclides and heavy metals. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 723:137920. [PMID: 32213403 DOI: 10.1016/j.scitotenv.2020.137920] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2019] [Revised: 03/12/2020] [Accepted: 03/12/2020] [Indexed: 06/10/2023]
Abstract
This study assessed the effects of environmental contamination by naturally occurring radionuclides and heavy metals on the genetic structure of a population of the earthworm Aporrectodea caliginosa. A. caliginosa were collected from four sites and characterized by amplified fragment length polymorphism (AFLP) analyses. No differences in genetic structure and diversity were found between sites that differed greatly in soil contamination levels of radionuclides and metals. However, when the genetic structure of the A. caliginosa population was analyzed without considering information about the sampling site, a complex intraspecific genetic structure was identified. At least three highly divergent lineages were found, in unequal proportions, of each genetically isolated group from each study site. No associations were found between the distribution of the detected genetic clusters and the geographical origin of the samples. Thus, no noticeable adaptive changes or signs of directional selection were detected, despite the long history of genotoxic waste disposal at the sampling site. These results suggest a combined effect of three factors on the genetic structure and diversity of A. caliginosa in soils: the complexity of the contaminant composition, the heterogeneous spatial distribution of the pollutants, and the complexity of the intraspecific genetic structures of A. caliginosa.
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Affiliation(s)
- Anna V Rybak
- Institute of Biology of Komi Science Centre of Ural Branch of RAS, Syktyvkar 167982, Russia
| | - Elena S Belykh
- Institute of Biology of Komi Science Centre of Ural Branch of RAS, Syktyvkar 167982, Russia
| | - Tatiana A Maystrenko
- Institute of Biology of Komi Science Centre of Ural Branch of RAS, Syktyvkar 167982, Russia.
| | - Dmitry M Shadrin
- Institute of Biology of Komi Science Centre of Ural Branch of RAS, Syktyvkar 167982, Russia
| | - Yana I Pylina
- Institute of Biology of Komi Science Centre of Ural Branch of RAS, Syktyvkar 167982, Russia
| | - Ivan F Chadin
- Institute of Biology of Komi Science Centre of Ural Branch of RAS, Syktyvkar 167982, Russia.
| | - Ilya O Velegzhaninov
- Institute of Biology of Komi Science Centre of Ural Branch of RAS, Syktyvkar 167982, Russia; Polytechnical Institute of Vyatka State University, Kirov 610020, Russia.
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37
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Agriculture and the Disruption of Plant–Microbial Symbiosis. Trends Ecol Evol 2020; 35:426-439. [DOI: 10.1016/j.tree.2020.01.006] [Citation(s) in RCA: 52] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2019] [Revised: 01/13/2020] [Accepted: 01/21/2020] [Indexed: 12/29/2022]
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38
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Diaz Pauli B, Edeline E, Evangelista C. Ecosystem consequences of multi-trait response to environmental changes in Japanese medaka, Oryzias latipes. CONSERVATION PHYSIOLOGY 2020; 8:coaa011. [PMID: 32274061 PMCID: PMC7125048 DOI: 10.1093/conphys/coaa011] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2019] [Revised: 01/21/2020] [Accepted: 02/02/2020] [Indexed: 06/01/2023]
Abstract
Intraspecific trait variation has large effects on the ecosystem and is greatly affected by human activities. To date, most studies focused on single-trait analyses, while considering multiple traits is expected to better predict how an individual interacts with its environment. Here, we used a mesocosm experiment with fish Oryzias latipes to test whether individual growth, boldness and functional traits (feeding rate and stoichiometric traits) formed one functional pace-of-life syndrome (POLS). We then tested the effects of among-individual mean and variance of fish functional POLSs within mesocosms on invertebrate community (e.g. zoobenthos and zooplankton abundances) and ecosystem processes (e.g. ecosystem metabolism, algae stock, nutrient concentrations). Stoichiometric traits correlated with somatic growth and behaviours, forming two independent functional POLS (i.e. two major covariance axes). Mean values of the first syndrome were sex- and environment-dependent and were associated with (i) long-term (10 generations; 4 years) selection for small or large body size resulting in contrasting life histories and (ii) short-term (6 weeks) effects of experimental treatments on resource availability (through manipulation of light intensity and interspecific competition). Specifically, females and individuals from populations selected for a small body size presented fast functional POLS with faster growth rate, higher carbon body content and lower boldness. Individuals exposed to low resources (low light and high competition) displayed a slow functional POLS. Higher mesocosm mean and variance values in the second functional POLS (i.e. high feeding rate, high carbon:nitrogen body ratio, low ammonium excretion rate) were associated to decreased prey abundances, but did not affect any of the ecosystem processes. We highlighted the presence of functional multi-trait covariation in medaka, which were affected by sex, long-term selection history and short-term environmental conditions, that ultimately had cascading ecological consequences. We stressed the need for applying this approach to better predict ecosystem response to anthropogenic global changes.
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Affiliation(s)
- Beatriz Diaz Pauli
- Department of Biosciences, Centre for Ecological and Evolutionary Syntheses (CEES), University of Oslo, Blindernveien 31, N-0316 Oslo, Norway
| | - Eric Edeline
- ESE Ecology and Ecosystem Health, INRAE, Agocampus Ouest, 65 rue de Saint-Brieuc 35042 Rennes, France
| | - Charlotte Evangelista
- Department of Biosciences, Centre for Ecological and Evolutionary Syntheses (CEES), University of Oslo, Blindernveien 31, N-0316 Oslo, Norway
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39
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Perry GH. How human behavior can impact the evolution of genetically-mediated behavior in wild non-human species. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2020; 206:337-342. [PMID: 32201915 DOI: 10.1007/s00359-020-01415-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2019] [Revised: 02/24/2020] [Accepted: 02/27/2020] [Indexed: 11/29/2022]
Abstract
Humans intensely modify the ecosystems we inhabit. Many of the impacts that this behavior can have on other species also sharing these spaces are obvious. A prime example is the devastating current extinction crisis. Yet some populations of non-human, non-domesticated species survive or even appear to thrive in heavily disturbed or human-built habitats. Theoretically, this apparent paradox could be facilitated partly by the evolution of genetically-mediated trait adaptations to the impacts of human behavior. At the least, persistence in strongly modified habitats would provide requisite selection pressures for this process to potentially occur in the future. In fact, we have a growing number of well-characterized examples of morphological trait adaptations to human behavior. However, our knowledge of genetically-mediated behavioral adaptations in similar contexts is less well developed. In this review I set up and discuss several evolutionary scenarios by which human behavior might have impacted the evolution of genetically mediated behavior in non-human, non-domestic species and highlight several approaches that could be used in future studies of this process.
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Affiliation(s)
- George H Perry
- Department of Anthropology, Pennsylvania State University, University Park, PA, 16802, USA. .,Department of Biology, Pennsylvania State University, University Park, USA. .,Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, USA. .,DFG Center for Advanced Studies, University of Tübingen, Tübingen, Germany.
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40
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Cayuela H, Besnard A, Cote J, Laporte M, Bonnaire E, Pichenot J, Schtickzelle N, Bellec A, Joly P, Léna J. Anthropogenic disturbance drives dispersal syndromes, demography, and gene flow in amphibian populations. ECOL MONOGR 2020. [DOI: 10.1002/ecm.1406] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Hugo Cayuela
- Univ. Lyon Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA F‐69622 Villeurbanne France
- EPHE, UM, SupAgro, IRD, INRA, UMR 5175 CEFE, CNRS PSL Research University Montpellier F‐34293 France
| | - Aurélien Besnard
- EPHE, UM, SupAgro, IRD, INRA, UMR 5175 CEFE, CNRS PSL Research University Montpellier F‐34293 France
| | - Julien Cote
- CNRS, Université Toulouse III Paul Sabatier, ENFA UMR5174EDB (Laboratoire Évolution & Diversité Biologique) 118 route de Narbonne F‐31062 Toulouse France
| | - Martin Laporte
- EPHE, UM, SupAgro, IRD, INRA, UMR 5175 CEFE, CNRS PSL Research University Montpellier F‐34293 France
| | - Eric Bonnaire
- Office National des Forêts Agence de Verdun 55100 Verdun France
| | - Julian Pichenot
- Centre de Recherche et Formation en Eco‐éthologie (CERFE) CERFE 08240 Boult‐aux‐Bois France
| | - Nicolas Schtickzelle
- Earth and Life Institute Biodiversity Research Centre Université Catholique de Louvain 1348 Louvain‐la‐Neuve Belgium
| | - Arnaud Bellec
- Univ. Lyon Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA F‐69622 Villeurbanne France
| | - Pierre Joly
- Univ. Lyon Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA F‐69622 Villeurbanne France
| | - Jean‐Paul Léna
- Univ. Lyon Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA F‐69622 Villeurbanne France
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41
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Oziolor EM, DeSchamphelaere K, Lyon D, Nacci D, Poynton H. Evolutionary Toxicology-An Informational Tool for Chemical Regulation? ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 2020; 39:257-268. [PMID: 31978273 PMCID: PMC7885860 DOI: 10.1002/etc.4611] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Affiliation(s)
- Elias M Oziolor
- Department of Environmental Toxicology, University of California at Davis, Davis, CA, USA
| | - Karel DeSchamphelaere
- Laboratory of Environmental Toxicology and Aquatic Ecology, GhEnToxLab Unit, Ghent University, Gent, Belgium
| | - Delina Lyon
- Shell Health, Shell Oil Company, Houston, TX, USA
| | - Diane Nacci
- Atlantic Coastal Environmental Sciences Division, Center for Environmental Measurements and Modeling, Office of Research and Development, US Environmental Protection Agency, Narragansett, RI, USA
| | - Helen Poynton
- School for the Environment, University of Massachusetts Boston, Boston, MA, USA
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42
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Khimoun A, Doums C, Molet M, Kaufmann B, Peronnet R, Eyer PA, Mona S. Urbanization without isolation: the absence of genetic structure among cities and forests in the tiny acorn ant Temnothorax nylanderi. Biol Lett 2020; 16:20190741. [PMID: 31992150 DOI: 10.1098/rsbl.2019.0741] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
Urban alteration of neutral and adaptive evolutionary processes is still underexplored. Using a genome-wide SNP dataset, we investigated (i) urban-induced modifications of population demography, genetic diversity and population structure and (ii) signature of divergent selection between urban and forest populations in the ant species, Temnothorax nylanderi. Our results did not reveal an impact of urbanization on neutral processes since we observed: (i) analogous genetic diversity among paired urban/forest sites and two control populations; (ii) weak population genetic structure explained neither by habitat (urban versus forest) nor by geography; (iii) a remarkably similar demographic history across populations with an ancestral growth followed by a recent decline, regardless of their current habitat or geographical location. The micro-geographical home range of ants may explain their resilience to urbanization. Finally, we detected 19 candidate loci discriminating urban/forest populations and associated with core cellular components, molecular function or biological process. Two of these loci were associated with a gene ontology term that was previously found to belong to a module of co-expressed genes related to caste phenotype. These results call for transcriptomics analyses to identify genes associated with ant social traits and to infer their potential role in urban adaptation.
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Affiliation(s)
- A Khimoun
- Biogéosciences, UMR 6282 CNRS, Université Bourgogne Franche-Comté, 6 Boulevard Gabriel, 21000 Dijon, France
| | - C Doums
- Institut de Systématique, Évolution, Biodiversité (ISYEB), UMR 7205, MNHN, CNRS, EPHE, Sorbonne Université, 75005 Paris, France.,EPHE, PSL University, 75005 Paris, France
| | - M Molet
- Institut d'Ecologie et des Sciences de l'Environnement de Paris (iEES-Paris), UMR 7618, Sorbonne Université, Université Paris Est Créteil, Université Paris Diderot, CNRS, INRA, IRD, 75005 Paris, France
| | - B Kaufmann
- Université de Lyon, UMR5023 Ecologie des Hydrosystèmes Naturels et Anthropisés, Université Lyon 1, ENTPE, CNRS, Villeurbanne 69622, France
| | - R Peronnet
- Institut d'Ecologie et des Sciences de l'Environnement de Paris (iEES-Paris), UMR 7618, Sorbonne Université, Université Paris Est Créteil, Université Paris Diderot, CNRS, INRA, IRD, 75005 Paris, France
| | - P A Eyer
- Department of Entomology, Texas A&M University, 2143 TAMU, College Station, TX 77843-2143, USA
| | - S Mona
- Institut de Systématique, Évolution, Biodiversité (ISYEB), UMR 7205, MNHN, CNRS, EPHE, Sorbonne Université, 75005 Paris, France.,EPHE, PSL University, 75005 Paris, France
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43
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Bonnet T, Morrissey MB, Morris A, Morris S, Clutton-Brock TH, Pemberton JM, Kruuk LEB. The role of selection and evolution in changing parturition date in a red deer population. PLoS Biol 2019; 17:e3000493. [PMID: 31689300 PMCID: PMC6830748 DOI: 10.1371/journal.pbio.3000493] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2019] [Accepted: 10/02/2019] [Indexed: 11/17/2022] Open
Abstract
Changing environmental conditions cause changes in the distributions of phenotypic traits in natural populations. However, determining the mechanisms responsible for these changes—and, in particular, the relative contributions of phenotypic plasticity versus evolutionary responses—is difficult. To our knowledge, no study has yet reported evidence that evolutionary change underlies the most widely reported phenotypic response to climate change: the advancement of breeding times. In a wild population of red deer, average parturition date has advanced by nearly 2 weeks in 4 decades. Here, we quantify the contribution of plastic, demographic, and genetic components to this change. In particular, we quantify the role of direct phenotypic plasticity in response to increasing temperatures and the role of changes in the population structure. Importantly, we show that adaptive evolution likely played a role in the shift towards earlier parturition dates. The observed rate of evolution was consistent with a response to selection and was less likely to be due to genetic drift. Our study provides a rare example of observed rates of genetic change being consistent with theoretical predictions, although the consistency would not have been detected with a solely phenotypic analysis. It also provides, to our knowledge, the first evidence of both evolution and phenotypic plasticity contributing to advances in phenology in a changing climate. Adaptive genetic evolution and phenotypic plasticity both contribute to a two-week advancement of birth dates earlier in spring in a deer population subject to temperature warming over four decades.
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Affiliation(s)
- Timothée Bonnet
- Research School of Biology, The Australian National University, Canberra, Australia
| | | | - Alison Morris
- Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Edinburgh, United Kingdom
| | - Sean Morris
- Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Edinburgh, United Kingdom
| | | | - Josephine M Pemberton
- Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Edinburgh, United Kingdom
| | - Loeske E B Kruuk
- Research School of Biology, The Australian National University, Canberra, Australia
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44
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Leclerc M, Zedrosser A, Swenson JE, Pelletier F. Hunters select for behavioral traits in a large carnivore. Sci Rep 2019; 9:12371. [PMID: 31451727 PMCID: PMC6710287 DOI: 10.1038/s41598-019-48853-3] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2019] [Accepted: 08/12/2019] [Indexed: 11/09/2022] Open
Abstract
Human harvest can induce selection on life history and morphological traits, leading to ecological and evolutionary responses. Our understanding of harvest-induced selection on behavioral traits is, however, very limited. Here, we assessed whether hunters harvest, consciously or not, individuals with specific behavioral traits. We used long-term, detailed behavioral and survival data of a heavily harvested brown bear (Ursus arctos) population in Sweden. We found that hunters harvested male bears that were less active during legal hunting hours and had lower movement rates. Also, hunters harvested male and female bears that used habitats closer to roads. We provide an empirical example that individual behavior can modulate vulnerability to hunting and that hunters could exert a selective pressure on wildlife behaviors. This study increases our understanding of the complex interactions between harvest method, human behavior, and animal behavior that are at play in harvest-induced selection and provides better insight into the full effects of human harvest on wild populations.
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Affiliation(s)
- M Leclerc
- Canada Research Chair in Evolutionary Demography and Conservation & Centre for Northern Studies, Département de biologie, Université de Sherbrooke, Sherbrooke, J1K2R1, Canada.
| | - A Zedrosser
- Faculty of Technology, Natural Sciences and Maritime Sciences, Department of Natural Sciences and Environmental Health, University of South-Eastern Norway, N-3800 Bø i, Telemark, Norway. .,Department of Integrative Biology, Institute of Wildlife Biology and Game Management, University of Natural Resources and Life Sciences, Vienna, Gregor Mendel Str. 33, A - 1180, Vienna, Austria.
| | - J E Swenson
- Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, PO Box 5003, NO - 1432 Ås, Oslo, Norway.,Norwegian Institute for Nature Research, NO-7485, Trondheim, Norway
| | - F Pelletier
- Canada Research Chair in Evolutionary Demography and Conservation & Centre for Northern Studies, Département de biologie, Université de Sherbrooke, Sherbrooke, J1K2R1, Canada
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45
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Crozier LG, McClure MM, Beechie T, Bograd SJ, Boughton DA, Carr M, Cooney TD, Dunham JB, Greene CM, Haltuch MA, Hazen EL, Holzer DM, Huff DD, Johnson RC, Jordan CE, Kaplan IC, Lindley ST, Mantua NJ, Moyle PB, Myers JM, Nelson MW, Spence BC, Weitkamp LA, Williams TH, Willis-Norton E. Climate vulnerability assessment for Pacific salmon and steelhead in the California Current Large Marine Ecosystem. PLoS One 2019; 14:e0217711. [PMID: 31339895 PMCID: PMC6655584 DOI: 10.1371/journal.pone.0217711] [Citation(s) in RCA: 45] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2019] [Accepted: 05/16/2019] [Indexed: 12/25/2022] Open
Abstract
Major ecological realignments are already occurring in response to climate change. To be successful, conservation strategies now need to account for geographical patterns in traits sensitive to climate change, as well as climate threats to species-level diversity. As part of an effort to provide such information, we conducted a climate vulnerability assessment that included all anadromous Pacific salmon and steelhead (Oncorhynchus spp.) population units listed under the U.S. Endangered Species Act. Using an expert-based scoring system, we ranked 20 attributes for the 28 listed units and 5 additional units. Attributes captured biological sensitivity, or the strength of linkages between each listing unit and the present climate; climate exposure, or the magnitude of projected change in local environmental conditions; and adaptive capacity, or the ability to modify phenotypes to cope with new climatic conditions. Each listing unit was then assigned one of four vulnerability categories. Units ranked most vulnerable overall were Chinook (O. tshawytscha) in the California Central Valley, coho (O. kisutch) in California and southern Oregon, sockeye (O. nerka) in the Snake River Basin, and spring-run Chinook in the interior Columbia and Willamette River Basins. We identified units with similar vulnerability profiles using a hierarchical cluster analysis. Life history characteristics, especially freshwater and estuary residence times, interplayed with gradations in exposure from south to north and from coastal to interior regions to generate landscape-level patterns within each species. Nearly all listing units faced high exposures to projected increases in stream temperature, sea surface temperature, and ocean acidification, but other aspects of exposure peaked in particular regions. Anthropogenic factors, especially migration barriers, habitat degradation, and hatchery influence, have reduced the adaptive capacity of most steelhead and salmon populations. Enhancing adaptive capacity is essential to mitigate for the increasing threat of climate change. Collectively, these results provide a framework to support recovery planning that considers climate impacts on the majority of West Coast anadromous salmonids.
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Affiliation(s)
- Lisa G. Crozier
- Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Seattle, Washington, United States of America
- * E-mail:
| | - Michelle M. McClure
- Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Seattle, Washington, United States of America
| | - Tim Beechie
- Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Seattle, Washington, United States of America
| | - Steven J. Bograd
- Southwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Monterey, California, United States of America
| | - David A. Boughton
- Southwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Santa Cruz, California, United States of America
| | - Mark Carr
- Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, California, United States of America
| | - Thomas D. Cooney
- Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Seattle, Washington, United States of America
| | - Jason B. Dunham
- Forest & Rangeland Ecosystem Science Center, U.S. Geological Survey, Corvallis, Oregon, United States of America
| | - Correigh M. Greene
- Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Seattle, Washington, United States of America
| | - Melissa A. Haltuch
- Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Seattle, Washington, United States of America
| | - Elliott L. Hazen
- Southwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Monterey, California, United States of America
| | - Damon M. Holzer
- Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Seattle, Washington, United States of America
| | - David D. Huff
- Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Seattle, Washington, United States of America
| | - Rachel C. Johnson
- Southwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Santa Cruz, California, United States of America
- Center for Watershed Sciences, University of California, Davis, California, United States of America
| | - Chris E. Jordan
- Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Seattle, Washington, United States of America
| | - Isaac C. Kaplan
- Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Seattle, Washington, United States of America
| | - Steven T. Lindley
- Southwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Santa Cruz, California, United States of America
| | - Nathan J. Mantua
- Southwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Santa Cruz, California, United States of America
| | - Peter B. Moyle
- Department of Wildlife, Fish and Conservation Biology, University of California, Davis, California, United States of America
| | - James M. Myers
- Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Seattle, Washington, United States of America
| | - Mark W. Nelson
- ECS Federal, Inc. Under Contract to Office of Sustainable Fisheries, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Silver Spring, Maryland, United States of America
| | - Brian C. Spence
- Southwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Santa Cruz, California, United States of America
| | - Laurie A. Weitkamp
- Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Seattle, Washington, United States of America
| | - Thomas H. Williams
- Southwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Santa Cruz, California, United States of America
| | - Ellen Willis-Norton
- Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, California, United States of America
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46
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Bonnet T, Morrissey MB, Kruuk LEB. Estimation of Genetic Variance in Fitness, and Inference of Adaptation, When Fitness Follows a Log-Normal Distribution. J Hered 2019; 110:383-395. [DOI: 10.1093/jhered/esz018] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2018] [Accepted: 04/07/2019] [Indexed: 01/19/2023] Open
Abstract
AbstractAdditive genetic variance in relative fitness (σA2(w)) is arguably the most important evolutionary parameter in a population because, by Fisher’s fundamental theorem of natural selection (FTNS; Fisher RA. 1930. The genetical theory of natural selection. 1st ed. Oxford: Clarendon Press), it represents the rate of adaptive evolution. However, to date, there are few estimates of σA2(w) in natural populations. Moreover, most of the available estimates rely on Gaussian assumptions inappropriate for fitness data, with unclear consequences. “Generalized linear animal models” (GLAMs) tend to be more appropriate for fitness data, but they estimate parameters on a transformed (“latent”) scale that is not directly interpretable for inferences on the data scale. Here we exploit the latest theoretical developments to clarify how best to estimate quantitative genetic parameters for fitness. Specifically, we use computer simulations to confirm a recently developed analog of the FTNS in the case when expected fitness follows a log-normal distribution. In this situation, the additive genetic variance in absolute fitness on the latent log-scale (σA2(l)) equals (σA2(w)) on the data scale, which is the rate of adaptation within a generation. However, due to inheritance distortion, the change in mean relative fitness between generations exceeds σA2(l) and equals (exp(σA2(l))−1). We illustrate why the heritability of fitness is generally low and is not a good measure of the rate of adaptation. Finally, we explore how well the relevant parameters can be estimated by animal models, comparing Gaussian models with Poisson GLAMs. Our results illustrate 1) the correspondence between quantitative genetics and population dynamics encapsulated in the FTNS and its log-normal-analog and 2) the appropriate interpretation of GLAM parameter estimates.
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Affiliation(s)
- Timothée Bonnet
- Division of Ecology and Evolution, Research School of Biology, The Australian National University, Canberra, ACT, Australia
| | | | - Loeske E B Kruuk
- Division of Ecology and Evolution, Research School of Biology, The Australian National University, Canberra, ACT, Australia
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47
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Rivrud IM, Frank SC, Bischof R, Mysterud A, Steyaert SMJG, Hertel AG, Hagen SB, Eiken HG, Swenson JE, Zedrosser A. Heritability of head size in a hunted large carnivore, the brown bear ( Ursus arctos). Evol Appl 2019; 12:1124-1135. [PMID: 31297144 PMCID: PMC6597896 DOI: 10.1111/eva.12786] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2018] [Revised: 02/18/2019] [Accepted: 02/21/2019] [Indexed: 01/24/2023] Open
Abstract
Wild animal populations experience selection pressures from both natural and anthropogenic sources. The availability of extensive pedigrees is increasing along with our ability to quantify the heritability and evolvability of phenotypic traits and thus the speed and potential for evolutionary change in wild populations. The environment may also affect gene expressions in individuals, which may in turn affect the potential of phenotypic traits to respond to selection. Knowledge about the relationship between the genetic and environmental components of phenotypic variation is particularly relevant, given ongoing anthropogenically driven global change. Using a quantitative genetic mixed model, we disentangled the genetic and environmental components of phenotypic variance in a large carnivore, the brown bear (Ursus arctos). We combined a pedigree covering ~1,500 individual bears over seven generations with location data from 413 bears, as well as data on bear density, habitat characteristics, and climatic conditions. We found a narrow-sense heritability of 0.24 (95% CrI: 0.06-0.38) for brown bear head size, showing that the trait can respond to selection at a moderate speed. The environment contributed substantially to phenotypic variation, and we partitioned this into birth year (5.9%), nonadditive among-individual genetic (15.0%), and residual (50.4%) environmental effects. Brown bear head circumference showed an evolvability of 0.2%, which can generate large changes in the trait mean over some hundreds of generations. Our study is among the first to quantify heritability of a trait in a hunted large carnivore population. Such knowledge about the degree to which species experiencing hunting can respond to selection is crucial for conservation and to make informed management decisions. We show that including important environmental variables when analyzing heritability is key to understanding the dynamics of the evolutionary potential of phenotypic traits.
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Affiliation(s)
- Inger Maren Rivrud
- Department of Biosciences, Centre for Ecological and Evolutionary SynthesisUniversity of OsloOsloNorway
| | - Shane C. Frank
- Department of Natural Sciences and Environmental Health, Faculty of Technology, Natural Sciences and Maritime SciencesUniversity of South‐Eastern NorwayBø i TelemarkNorway
| | - Richard Bischof
- Faculty of Environmental Sciences and Natural Resource ManagementNorwegian University of Life SciencesÅsNorway
| | - Atle Mysterud
- Department of Biosciences, Centre for Ecological and Evolutionary SynthesisUniversity of OsloOsloNorway
| | - Sam M. J. G. Steyaert
- Department of Natural Sciences and Environmental Health, Faculty of Technology, Natural Sciences and Maritime SciencesUniversity of South‐Eastern NorwayBø i TelemarkNorway
- Faculty of Environmental Sciences and Natural Resource ManagementNorwegian University of Life SciencesÅsNorway
| | - Anne G. Hertel
- Faculty of Environmental Sciences and Natural Resource ManagementNorwegian University of Life SciencesÅsNorway
| | | | | | - Jon E. Swenson
- Faculty of Environmental Sciences and Natural Resource ManagementNorwegian University of Life SciencesÅsNorway
- Norwegian Institute for Nature ResearchTrondheimNorway
| | - Andreas Zedrosser
- Department of Natural Sciences and Environmental Health, Faculty of Technology, Natural Sciences and Maritime SciencesUniversity of South‐Eastern NorwayBø i TelemarkNorway
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Zohdy S, Schwartz TS, Oaks JR. The Coevolution Effect as a Driver of Spillover. Trends Parasitol 2019; 35:399-408. [PMID: 31053334 DOI: 10.1016/j.pt.2019.03.010] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2019] [Revised: 03/26/2019] [Accepted: 03/27/2019] [Indexed: 12/31/2022]
Abstract
Global habitat fragmentation is associated with the emergence of infectious diseases of wildlife origins in human populations. Despite this well-accepted narrative, the underlying mechanisms driving this association remain unclear. We introduce a nuanced hypothesis, the 'coevolution effect'. The central concept is that the subdivision of host populations which occurs with habitat fragmentation causes localized coevolution of hosts, obligate parasites, and pathogens which act as 'coevolutionary engines' within each fragment, accelerating pathogen diversification, and increasing pathogen diversity across the landscape. When combined with a mechanism to exit a fragment (e.g., mosquitoes), pathogen variants will spill over into human communities. Through this combined ecoevolutionary approach we may be able to understand the fine-scale mechanisms that drive disease emergence in the Anthropocene.
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Affiliation(s)
- Sarah Zohdy
- School of Forestry and Wildlife Sciences, Auburn University, Auburn, AL 36849, USA; College of Veterinary Medicine, Auburn University, Auburn, AL 36849, USA.
| | - Tonia S Schwartz
- Department of Biological Sciences, Auburn University, Auburn, AL 36849, USA
| | - Jamie R Oaks
- Department of Biological Sciences, Auburn University, Auburn, AL 36849, USA
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Vera-Escalona I, Habit E, Ruzzante DE. Invasive species and postglacial colonization: their effects on the genetic diversity of a Patagonian fish. Proc Biol Sci 2019; 286:20182567. [PMID: 30963839 PMCID: PMC6408905 DOI: 10.1098/rspb.2018.2567] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2018] [Accepted: 02/01/2019] [Indexed: 01/18/2023] Open
Abstract
The present distribution of Patagonian species is the result of a complex history involving Quaternary refugial populations, Holocene range expansions and demographic changes occurring during the Anthropocene. Invasive salmonids were introduced in Patagonia during the last century, occupying most rivers and lakes, preying on and competing with native species, including the fish Galaxias platei. Here, we used G. platei as a case study to understand how long-term (i.e. population differentiation during the Holocene) and short-term historical processes (salmonid introductions) affect genetic diversity. Using a suite of microsatellite markers, we found that the number of alleles is negatively correlated with the presence of salmonids (short-term processes), with G. platei populations from lakes with salmonids exhibiting significantly lower genetic diversity than populations from lakes without salmonids. Simulations (100 years backwards) showed that this difference in genetic diversity can be explained by a 99% reduction in population size. Allelic richness and observed heterozygosities were also negatively correlated with the presence of salmonids, but also positively correlated with long-term processes linked to Quaternary glaciations. Our results show how different genetic parameters can help identify processes taking place at different scales and their importance in terms of conservation.
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Affiliation(s)
- Iván Vera-Escalona
- Department of Biology, Dalhousie University, 1355 Oxford Street, Halifax, Nova Scotia, Canada B3H 4R2
- Centro de Investigación en Biodiversidad y Ambientes Sustentables (CIBAS), Universidad Católica de la Santísima Concepción, Alonso de Ribera 2850, Concepción, Chile
| | - Evelyn Habit
- Departamento de Sistemas Acuáticos, Facultad de Ciencias Ambientales y Centro EULA-Chile, Universidad de Concepción, Barrio Universitario s/n. Concepción, Casilla 160-C, Chile
| | - Daniel E. Ruzzante
- Department of Biology, Dalhousie University, 1355 Oxford Street, Halifax, Nova Scotia, Canada B3H 4R2
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