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Nguyen-Viet H, Lâm S, Alonso S, Unger F, Moodley A, Bett B, Fèvre EM, Knight-Jones T, Mor SM, Nguyen HTT, Grace D. Insights and future directions: Applying the One Health approach in international agricultural research for development to address food systems challenges. One Health 2025; 20:101007. [PMID: 40123918 PMCID: PMC11929046 DOI: 10.1016/j.onehlt.2025.101007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2024] [Revised: 02/11/2025] [Accepted: 02/26/2025] [Indexed: 03/25/2025] Open
Abstract
For more than 15 years, the International Livestock Research Institute (ILRI) has been striving to understand and address One Health challenges at the intersection of livestock, humans, and the environment. We present an overview of ILRI One Health projects implemented with partners across Asia and Africa, reflecting on key learnings and future directions for One Health research and food systems transformation. Drawing on a review of peer-reviewed and grey literature, we analyzed processes and outcomes of ILRI-led and supported initiatives using a realist evaluation framework (context, mechanisms, outcomes), and present insights within select One Health topic areas such as zoonoses, food safety, antimicrobial resistance. Our findings emphasize the need for stronger cross-sectoral collaboration, greater engagement with policymakers to translate research findings into actionable strategies, and the development of adaptable and context-specific interventions.
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Affiliation(s)
| | - Steven Lâm
- International Livestock Research Institute, Nairobi, Kenya
| | - Silvia Alonso
- International Livestock Research Institute, Addis Ababa, Ethiopia
| | - Fred Unger
- International Livestock Research Institute, Hanoi, Viet Nam
| | - Arshnee Moodley
- International Livestock Research Institute, Nairobi, Kenya
- Department of Veterinary and Animal Sciences, University of Copenhagen, Frederiksberg C, Denmark
| | - Bernard Bett
- International Livestock Research Institute, Nairobi, Kenya
| | - Eric M. Fèvre
- International Livestock Research Institute, Nairobi, Kenya
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Neston, United Kingdom
| | | | - Siobhan M. Mor
- International Livestock Research Institute, Addis Ababa, Ethiopia
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Neston, United Kingdom
| | - Ha Thi Thanh Nguyen
- International Livestock Research Institute, Hanoi, Viet Nam
- Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden
| | - Delia Grace
- International Livestock Research Institute, Nairobi, Kenya
- Natural Resources Institute, University of Greenwich, Greenwich, United Kingdom
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Were LM, Otieno JA, Nyanchoka M, Karanja PW, Omia D, Ngere P, Osoro E, Njenga MK, Mulaku M, Ngere I. Advance Warning and Response Systems in Kenya: A Scoping Review. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2025:2025.04.23.25326250. [PMID: 40313304 PMCID: PMC12045446 DOI: 10.1101/2025.04.23.25326250] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 05/03/2025]
Abstract
Introduction Infectious diseases (IDs) cause approximately 13.7 million deaths globally. The Kenyan Advance Warning and Response Systems (AW&RS) against ID outbreaks is a core capacity of the 2005 International Health Regulations and a key indicator of health security. We mapped evidence on Kenya's AW&RS and their enablers, and barriers for successfully detecting IDs, including climate-sensitive IDs. Methods We searched Cochrane Library, MEDLINE, EMBASE, Web of Science, Africa Index Medicus, and SCOPUS before August 26th, 2024. We also searched for grey literature on the Google Scholar search engine alongside the main repositories of Kenyan Universities. Two independent reviewers conducted study selection, while one reviewer extracted data. Discrepancies were resolved through discussion. Results were synthesised narratively and thematically. Results The search yielded 4,379 records from databases and 1,363 articles from websites, university repositories, and citations; we included 166 articles in the analysis. Integrated Disease Surveillance and Response (IDSR) and cohort surveillance systems were the most common (37.2%). Most studies were concentrated in Nairobi County (25.7%) and reported on malaria (23.6%). Most systems (82.4%) monitored the disease burden and outbreaks using hospital-based data (35.1%) and automated alert mechanisms (27.7%). National bulletins report a temporal association between environmental factors and disease prevalence. Malaria, Rift Valley Fever (RVF), and cholera cases increased with higher precipitation, lower temperatures and increased vegetative index. AW&RS used the accuracy and reliability of the model prediction to measure the system's performance. Effectiveness was evaluated based on system acceptability and timeliness. Health system factors were predominant, with 121 enablers and 127 barriers. Key enablers included skilled personnel (13 studies), whereas inadequate finances were a major barrier (21 studies). Conclusion Most AW&RS were IDSR and cohort-based surveillance. Climate changes have resulted in observed trends in diseases such as malaria and RVF, but further studies are needed to determine causal links. Insufficient funding hinders the effective implementation of AW&RS. Future research should assess the cost drivers influencing system effectiveness.
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Affiliation(s)
- Lisa M. Were
- Research Department, Horn Population Research & Development, Nairobi, Kenya
| | - Jenifer A. Otieno
- Malaria Branch, Centre for Global Health Research, Kenya Medical Research Institute, Kisumu, Kenya
| | - Moriasi Nyanchoka
- Health Economics Research Unit, KEMRI Wellcome Trust Research Programme, Nairobi, Kenya
| | | | - Dalmas Omia
- Institute of Anthropology, Gender and African Studies, University of Nairobi, Nairobi, Kenya
| | - Philip Ngere
- Washington State University Global Health Program, Nairobi, Kenya
| | - Eric Osoro
- Washington State University Global Health Program, Nairobi, Kenya
- Paul G Allen School of Global Health, Washington State University, Pullman, US
| | - M. Kariuki Njenga
- Washington State University Global Health Program, Nairobi, Kenya
- Paul G Allen School of Global Health, Washington State University, Pullman, US
| | - Mercy Mulaku
- Department of Pharmacology, Clinical Pharmacy and Pharmacy Practice, Faculty of Health Sciences, University of Nairobi, Nairobi, Kenya
| | - Isaac Ngere
- Washington State University Global Health Program, Nairobi, Kenya
- Paul G Allen School of Global Health, Washington State University, Pullman, US
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Oltean HN, Lipton B, Black A, Snekvik K, Haman K, Buswell M, Baines AE, Rabinowitz PM, Russell SL, Shadomy S, Ghai RR, Rekant S, Lindquist S, Baseman JG. Developing a one health data integration framework focused on real-time pathogen surveillance and applied genomic epidemiology. ONE HEALTH OUTLOOK 2025; 7:9. [PMID: 39972521 PMCID: PMC11841253 DOI: 10.1186/s42522-024-00133-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Accepted: 12/20/2024] [Indexed: 02/21/2025]
Abstract
BACKGROUND The One Health approach aims to balance and optimize the health of humans, animals, and ecosystems, recognizing that shared health outcomes are interdependent. A One Health approach to disease surveillance, control, and prevention requires infrastructure for coordinating, collecting, integrating, and analyzing data across sectors, incorporating human, animal, and environmental surveillance data, as well as pathogen genomic data. However, unlike data interoperability problems faced within a single organization or sector, data coordination and integration across One Health sectors requires engagement among partners to develop shared goals and capacity at the response level. Successful examples are rare; as such, we sought to develop a framework for local One Health practitioners to utilize in support of such efforts. METHODS We conducted a systematic scientific and gray literature review to inform development of a One Health data integration framework. We discussed a draft framework with 17 One Health and informatics experts during semi-structured interviews. Approaches to genomic data integration were identified. RESULTS In total, 57 records were included in the final study, representing 13 pre-defined frameworks for health systems, One Health, or data integration. These frameworks, included articles, and expert feedback were incorporated into a novel framework for One Health data integration. Two scenarios for genomic data integration were identified in the literature and outlined. CONCLUSIONS Frameworks currently exist for One Health data integration and separately for general informatics processes; however, their integration and application to real-time disease surveillance raises unique considerations. The framework developed herein considers common challenges of limited resource settings, including lack of informatics support during planning, and the need to move beyond scoping and planning to system development, production, and joint analyses. Several important considerations separate this One Health framework from more generalized informatics frameworks; these include complex partner identification, requirements for engagement and co-development of system scope, complex data governance, and a requirement for joint data analysis, reporting, and interpretation across sectors for success. This framework will support operationalization of data integration at the response level, providing early warning for impending One Health events, promoting identification of novel hypotheses and insights, and allowing for integrated One Health solutions.
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Affiliation(s)
- Hanna N Oltean
- Washington State Department of Health, 1610 NE 150th St, Shoreline, WA, 98155, USA.
- University of Washington, 1410 NE Campus Parkway, 98195, Seattle, Washington, USA.
| | - Beth Lipton
- Washington State Department of Health, 1610 NE 150th St, Shoreline, WA, 98155, USA
| | - Allison Black
- Washington State Department of Health, 1610 NE 150th St, Shoreline, WA, 98155, USA
| | - Kevin Snekvik
- Washington Animal Disease Diagnostic Laboratory, Washington State University, 1940 Olympia Ave, 99164, Pullman, Washington, USA
- Department of Veterinary Microbiology and Pathology, Washington State University, 1845 Ott Rd, Pullman, WA, 99163, USA
| | - Katie Haman
- Washington Department of Fish and Wildlife, Wildlife Program, 1111 Washington St SE, 98501, Olympia, Washington, USA
| | - Minden Buswell
- Washington State Department of Agriculture, 1111 Washington St SE, 98501, Olympia, Washington, USA
| | - Anna E Baines
- University of Washington, 1410 NE Campus Parkway, 98195, Seattle, Washington, USA
| | - Peter M Rabinowitz
- University of Washington, 1410 NE Campus Parkway, 98195, Seattle, Washington, USA
| | - Shannon L Russell
- British Columbia Center for Disease Control, 655 West 12th Avenue, Vancouver, BC, V5Z 4R4, Canada
| | - Sean Shadomy
- Centers for Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA, 30333, US
| | - Ria R Ghai
- Centers for Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA, 30333, US
| | - Steven Rekant
- Department of Agriculture Animal and Plant Health Inspection Service, United States, 4700 River Road, 1610 NE 150th St, Riverdale, Shoreline, MD, WA, 20737, 418- 5428, 98155, USA
| | - Scott Lindquist
- Washington State Department of Health, 1610 NE 150th St, Shoreline, WA, 98155, USA
| | - Janet G Baseman
- University of Washington, 1410 NE Campus Parkway, 98195, Seattle, Washington, USA
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Lawan PY, Niba AT, Awah-Ndukum J. Epidemiology of Cysticercus tenuicollis in Sheep and Goats in the Tropics: A Systematic Review. Vet Med Int 2024; 2024:7881494. [PMID: 39712531 PMCID: PMC11663048 DOI: 10.1155/vmi/7881494] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2024] [Revised: 11/12/2024] [Accepted: 12/02/2024] [Indexed: 12/24/2024] Open
Abstract
Sheep and goat influence the socioeconomic sustainability of rural communities in tropical countries, but parasitic diseases and Cysticercus tenuicollis in particular are responsible for their low productivity. The occurrence of Cysticercus tenuicollis in most affected regions of the world has been associated to the presence of stray dogs in the grazing area, which play vital roles in the life cycle of the parasite and poor disposal of contaminated and seized offal, organs, and carcasses. The aim of this paper is to systematically review the epidemiology of Cysticercus tenuicollis infection in sheep and goats in the tropics between 2010 and 2022 through the analysis of published qualitative and quantitative data on prevalence, risk factors, organ distribution, and interventions. The review showed that goats are more susceptible to Cysticercus tenuicollis than sheep in the tropics, and the prevalence rates based on meat inspection range from 0.45% to 56.8% in sheep and 4.83% to 72.38% in goats. More adult (2.9% to 83.17%) and female (0.96% to 71.42%) were infected than young (2.7% to 61.79%) and male (2.3% to 72.53%) animals. Higher infection rates were reported among animals in highland (7.99% to 73.61%) compared to animals in lowlands (4.70% to 69.69%). Overall, Cysticercus tenuicollis were observed on the abdominal visceral organs but predominantly on the omentum and liver, and affected animals were significantly higher during wet seasons. The review highlights the implementation of the One Health approach to improve understanding of the epidemiology, roles of different hosts, and environmental health in relation to the prevention and control of Cysticercus tenuicollis in the tropics.
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Affiliation(s)
- Prudentia Yensi Lawan
- Department of Animal Production Technology, College of Technology, The University of Bamenda, P.O. Box 39, Bambili, Bamenda, Cameroon
| | - Aziwo Tatanja Niba
- Department of Animal Production Technology, College of Technology, The University of Bamenda, P.O. Box 39, Bambili, Bamenda, Cameroon
| | - Julius Awah-Ndukum
- Department of Animal Production Technology, College of Technology, The University of Bamenda, P.O. Box 39, Bambili, Bamenda, Cameroon
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Yasobant S, Tadvi R, Bruchhausen W, Saxena DB. Application of the One Health Surveillance (OHS) Matrix to Evaluate the Disease Surveillance Systems in Gujarat, India: A Policy Content Analysis. J Epidemiol Glob Health 2024; 14:1633-1641. [PMID: 39453563 PMCID: PMC11652458 DOI: 10.1007/s44197-024-00317-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2024] [Accepted: 10/15/2024] [Indexed: 10/26/2024] Open
Abstract
An effective disease surveillance system can detect outbreaks of emerging zoonotic diseases early and allow the system to respond immediately and control the epidemic. Gujarat is a western Indian state with a population of more than 65 million humans and 26 million livestock, and it has the respective surveillance systems under the Department of Health & Family Welfare for humans and the Department of Animal Husbandry for animals. A veterinarian is placed on establishing cross-sectoral collaborations between these systems, but the joint collaborative activities and their effect on the early warning response are least understood. This provides an opportunity to conduct a secondary policy content analysis study using the One Health Surveillance Matrix (OHSM). The aim of this study was to evaluate the level of collaboration among human-animal disease surveillance systems for zoonotic disease in Gujarat, India. This study findings highlight a few gaps in the human health surveillance system, such as data sharing, sampling, outreach to decision-makers, and external communication, while the animal health surveillance system exhibits deficiencies in the data dissemination to decision-makers, management and storage of data analysis, interpretation of data, and external communication as per the OHSM evaluation. Despite major differences, there is a possibility of developing the One Health Surveillance system in Gujarat, India which is profoundly documented in this study.
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Affiliation(s)
- Sandul Yasobant
- Department of Public Health Science, Indian Institute of Public Health Gandhinagar (IIPHG), Opp. New Air Force Station HQ, Nr Lekawada, Gandhinagar, 382042, India.
- Centre for One Health Education, Research and Development (COHERD), Indian Institute of Public Health Gandhinagar (IIPHG), Opp. New Air Force Station HQ, Nr Lekhawada, Gandhinagar, 382042, India.
- School of Epidemiology and Public Health, Datta Meghe Institute of Medical Sciences (DMIMS), Wardha, 442107, India.
- Global Health, Institute for Hygiene and Public Health, University Hospital Bonn, 53127, Bonn, Germany.
| | - Ravina Tadvi
- Centre for One Health Education, Research and Development (COHERD), Indian Institute of Public Health Gandhinagar (IIPHG), Opp. New Air Force Station HQ, Nr Lekhawada, Gandhinagar, 382042, India
| | - Walter Bruchhausen
- Global Health, Institute for Hygiene and Public Health, University Hospital Bonn, 53127, Bonn, Germany
| | - Deepak B Saxena
- Department of Public Health Science, Indian Institute of Public Health Gandhinagar (IIPHG), Opp. New Air Force Station HQ, Nr Lekawada, Gandhinagar, 382042, India
- Centre for One Health Education, Research and Development (COHERD), Indian Institute of Public Health Gandhinagar (IIPHG), Opp. New Air Force Station HQ, Nr Lekhawada, Gandhinagar, 382042, India
- School of Epidemiology and Public Health, Datta Meghe Institute of Medical Sciences (DMIMS), Wardha, 442107, India
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Hamilton KA, Njoroge SM, Momanyi K, Murungi MK, Odinga CO, Bor N, Ogendo A, Odaba J, Ogola JG, Fèvre EM, Falzon LC. The antimicrobial resistance landscape of slaughterhouses in western Kenya: A microbiological case study. One Health 2024; 19:100899. [PMID: 39381065 PMCID: PMC11458994 DOI: 10.1016/j.onehlt.2024.100899] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2024] [Revised: 09/17/2024] [Accepted: 09/17/2024] [Indexed: 10/10/2024] Open
Abstract
Slaughterhouses may be hotspots for the transmission of antimicrobial resistant (AMR) pathogens. To obtain information on the AMR landscape in Kenyan slaughterhouses, we collected swabs of the environment, animal carcasses, and workers. Bacterial isolates were identified in 101/193 (52.3 %) samples, and most showed resistance to streptomycin (68.7 %), ampicillin (48.7 %), and tetracycline (42.5 %). Multi drug resistance was exhibited by 35/80 isolates (43.8 %; 95 % CI: 33.2-54.9 %), while Extended Spectrum Beta Lactamase was expressed in 5/80 isolates (6.3 %; 95 % CI: 2.6-14.3 %). These findings illustrate the presence of resistant bacteria throughout the slaughterhouse environment, posing a risk to workers and meat consumers and highlighting the need for an integrated surveillance system along the food chain.
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Affiliation(s)
- Katie A. Hamilton
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool L69 3BX, United Kingdom
- International Livestock Research Institute, P.O. Box 30709-00100, Nairobi, Kenya
| | - Sam M. Njoroge
- International Livestock Research Institute, P.O. Box 30709-00100, Nairobi, Kenya
- Kenya Medical Research Institute, P.O. Box 54840-00200, Nairobi, Kenya
| | - Kelvin Momanyi
- International Livestock Research Institute, P.O. Box 30709-00100, Nairobi, Kenya
| | - Maurice K. Murungi
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool L69 3BX, United Kingdom
- International Livestock Research Institute, P.O. Box 30709-00100, Nairobi, Kenya
| | - Christian O. Odinga
- International Livestock Research Institute, P.O. Box 30709-00100, Nairobi, Kenya
| | - Nicholas Bor
- International Livestock Research Institute, P.O. Box 30709-00100, Nairobi, Kenya
| | - Allan Ogendo
- International Livestock Research Institute, P.O. Box 30709-00100, Nairobi, Kenya
- Directorate of Veterinary Services, County Government of Busia, P.O. Box 261-50400, Busia, Kenya
| | - Josiah Odaba
- International Livestock Research Institute, P.O. Box 30709-00100, Nairobi, Kenya
| | - Joseph G. Ogola
- International Livestock Research Institute, P.O. Box 30709-00100, Nairobi, Kenya
- Directorate of Veterinary Services, County Government of Bungoma, P.O. Box 135-50200, Bungoma, Kenya
| | - Eric M. Fèvre
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool L69 3BX, United Kingdom
- International Livestock Research Institute, P.O. Box 30709-00100, Nairobi, Kenya
| | - Laura C. Falzon
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool L69 3BX, United Kingdom
- International Livestock Research Institute, P.O. Box 30709-00100, Nairobi, Kenya
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Gichuyia CM, Mtimet N, Fèvre EM, Thomas LF, Gathura PB, Onono JO, Akaichi F. Consumer preferences and willingness to pay for safe pork products in rural Kenya. Meat Sci 2024; 211:109450. [PMID: 38350245 DOI: 10.1016/j.meatsci.2024.109450] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Revised: 01/26/2024] [Accepted: 01/31/2024] [Indexed: 02/15/2024]
Abstract
Designing interventions to support the safe development of rapidly growing livestock value chains in sub-Saharan Africa requires a clear understanding of consumer demands. This study aimed to determine purchase patterns, consumers' preferences, and willingness to pay for safe pork attributes; specifically, the presence of a veterinary inspection stamp and the cleanliness of the butchery. A discrete choice experiment-based survey was used to investigate the purchasing behavior of 401 pork consumers: 253 buying raw pork for household consumption, and 148 buying cooked pork for out-of-home consumption. The study findings indicate that the average quantity of pork purchased by consumers was approximately 0.4 Kg per transaction, with the majority of consumers making several purchases per week. The average price per Kg of pork was KES 310 (Approx. 2.60 USD) at the time of the study. Data from the choice experiment showed that consumers were willing to pay a price premium of KES 245 (Approx. 2.1 USD) and KES 164 (Approx. 1.4 USD) per Kg for evidence of better veterinary meat inspection and higher butchery hygiene respectively; further, these were the two most important attributes they considered while making a pork purchase decision. These findings highlight the potential to leverage consumers' willingness to pay to improve the food safety within pork value chains in this context. Investing to increase consumer awareness on food safety issues should be considered to generate an effective market demand, especially in rural areas with relatively lower literacy levels.
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Affiliation(s)
- Cianjo M Gichuyia
- Department of Public Health, Pharmacology and Toxicology, University of Nairobi, P. O. Box 29053, 00625, Kangemi, Kenya; International Livestock Research Institute (ILRI), P.O. Box 30709, 00100 Nairobi, Kenya.
| | - Nadhem Mtimet
- International Fund for Agricultural Development (IFAD), 1191 Nile Corniche, Boulaq, Cairo, Egypt.
| | - Eric M Fèvre
- International Livestock Research Institute (ILRI), P.O. Box 30709, 00100 Nairobi, Kenya; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, L69 3BX Liverpool, UK.
| | - Lian F Thomas
- International Livestock Research Institute (ILRI), P.O. Box 30709, 00100 Nairobi, Kenya; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, L69 3BX Liverpool, UK.
| | - Peter B Gathura
- Department of Public Health, Pharmacology and Toxicology, University of Nairobi, P. O. Box 29053, 00625, Kangemi, Kenya.
| | - Joshua O Onono
- Department of Public Health, Pharmacology and Toxicology, University of Nairobi, P. O. Box 29053, 00625, Kangemi, Kenya.
| | - Faical Akaichi
- Department of Land Economy Environment and Society, Scotland's Rural College (SRUC), Edinburgh, UK.
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Hamilton KA, Njoroge SM, Momanyi K, Murungi MK, Odinga CO, Bor N, Ogendo AF, Odaba J, Ogola JG, Fèvre EM, Falzon LC. Antimicrobial Resistance in Slaughterhouses, Kenya. Emerg Infect Dis 2023; 29:2155-2158. [PMID: 37735786 PMCID: PMC10521590 DOI: 10.3201/eid2910.230017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/23/2023] Open
Abstract
Slaughterhouses are hotspots for the transmission of antimicrobial-resistant pathogens. We conducted stakeholder discussions on antimicrobial-resistant pathogens within the slaughterhouse setting. Butchers were described as powerful stakeholders; challenges included limited funding and staff, inadequate infrastructure, and limited laboratory capacity. Slaughterhouse workers understood that their work increased their risk for exposure.
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Mremi IR, Rumisha SF, Sindato C, Kimera SI, Mboera LEG. Comparative assessment of the human and animal health surveillance systems in Tanzania: Opportunities for an integrated one health surveillance platform. Glob Public Health 2023; 18:2110921. [PMID: 35951768 DOI: 10.1080/17441692.2022.2110921] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Accepted: 08/02/2022] [Indexed: 11/04/2022]
Abstract
Globally, there have been calls for an integrated zoonotic disease surveillance system. This study aimed to assess human and animal health surveillance systems to identify opportunities for One Health surveillance platform in Tanzania. A desk review of policies, acts and strategies addressing disease surveillance that support inter-sectoral collaboration was conducted. A semi-structured questionnaire was administered to key informants from the two sectors. Databases with potential relevance for surveillance were assessed. One Health-focused policies, acts, strategic plans and guidelines emphasising inter-sectoral collaboration strengthening were in place. Stable systems for collecting surveillance data with trained staff to implement surveillance activities at all levels in both sectors were available. While the human surveillance system was a mix of paper-based and web-based, the animal health system was mainly paper-based. The laboratory information system existed in both sectors, though not integrated with the epidemiological surveillance systems. Both the animal and human surveillance systems had low sensitivity to alert outbreaks. The findings indicate that individual, organisational, and infrastructure opportunities that support the integration of surveillance systems from multiple sectors exist. Challenges related to data sharing and quality need to be addressed for the effective implementation of the platform.
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Affiliation(s)
- Irene R Mremi
- SACIDS Foundation for One Health, Africa Centre of Excellence for Infectious Diseases of Human and Animals, Sokoine University of Agriculture, Morogoro, Tanzania
- National Institute for Medical Research, Dar es Salaam, Tanzania
- Department of Veterinary Medicine and Public Health, Sokoine University of Agriculture, Morogoro, Tanzania
| | - Susan F Rumisha
- National Institute for Medical Research, Dar es Salaam, Tanzania
- Malaria Atlas Project, Geospatial Health and Development, Telethon Kids Institute, West Perth, Australia
| | - Calvin Sindato
- SACIDS Foundation for One Health, Africa Centre of Excellence for Infectious Diseases of Human and Animals, Sokoine University of Agriculture, Morogoro, Tanzania
- National Institute for Medical Research, Tabora Research Centre, Tabora, Tanzania
| | - Sharadhuli I Kimera
- SACIDS Foundation for One Health, Africa Centre of Excellence for Infectious Diseases of Human and Animals, Sokoine University of Agriculture, Morogoro, Tanzania
- Department of Veterinary Medicine and Public Health, Sokoine University of Agriculture, Morogoro, Tanzania
| | - Leonard E G Mboera
- SACIDS Foundation for One Health, Africa Centre of Excellence for Infectious Diseases of Human and Animals, Sokoine University of Agriculture, Morogoro, Tanzania
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Chiuya T, Villinger J, Falzon LC, Alumasa L, Amanya F, Bastos ADS, Fèvre EM, Masiga DK. Molecular screening reveals non-uniform malaria transmission in western Kenya and absence of Rickettsia africae and selected arboviruses in hospital patients. Malar J 2022; 21:268. [PMID: 36115978 PMCID: PMC9482282 DOI: 10.1186/s12936-022-04287-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2021] [Accepted: 09/07/2022] [Indexed: 11/10/2022] Open
Abstract
Abstract
Background
In sub-Saharan Africa, malaria is the common diagnosis for febrile illness and related clinical features, resulting in the under-diagnosis of other aetiologies, such as arboviruses and Rickettsia. While these may not be significant causes of mortality in malaria-endemic areas, they affect the daily life and performance of affected individuals. It is, therefore, important to have a clear picture of these other aetiologies to institute correct diagnoses at hospitals and improve patient outcomes.
Methods
Blood samples were collected from patients with fever and other clinical features associated with febrile illness at selected hospitals in the malaria-endemic counties of Busia, Bungoma, and Kakamega, and screened for Crimean-Congo haemorrhagic fever, Sindbis, dengue and chikungunya viruses, Rickettsia africae, and Plasmodium spp. using high-throughput real-time PCR techniques. A logistic regression was performed on the results to explore the effect of demographic and socio-economic independent variables on malaria infection.
Results
A total of 336 blood samples collected from hospital patients between January 2018 and February 2019 were screened, of which 17.6% (59/336) were positive for Plasmodium falciparum and 1.5% (5/336) for Plasmodium malariae. Two patients had dual P. falciparum/P. malariae infections. The most common clinical features reported by the patients who tested positive for malaria were fever and headache. None of the patients were positive for the arboviruses of interest or R. africae. Patients living in Busia (OR 5.2; 95% CI 2.46–11.79; p < 0.001) and Bungoma counties (OR 2.7; 95% CI 1.27–6.16; p = 0.013) had higher odds of being infected with malaria, compared to those living in Kakamega County.
Conclusions
The reported malaria prevalence is in line with previous studies. The absence of arboviral and R. africae cases in this study may have been due to the limited number of samples screened, low-level circulation of arboviruses during inter-epidemic periods, and/or the use of PCR alone as a detection method. Other sero-surveys confirming their circulation in the area indicate that further investigations are warranted.
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Mbai J, Njoroge S, Obonyo M, Otieno C, Owiny M, Fèvre EM. Campylobacter positivity and public health risks in live bird markets in Busia, Kenya: A value chain analysis. Transbound Emerg Dis 2022; 69:e1839-e1853. [PMID: 35293702 PMCID: PMC9790384 DOI: 10.1111/tbed.14518] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2021] [Revised: 03/08/2022] [Accepted: 03/09/2022] [Indexed: 12/30/2022]
Abstract
Live bird markets (LBMs) provide integral hubs for 95% of poultry produced for food. Surveillance systems in LBMs serving smallholder farmers in sub-saharan Africa are often non-functional, and data about public health risks and emerging pathogens are lacking. Studies in Kenya have reported 29-44% Campylobacter prevalence in poultry. We analysed such LBMs in Kenya for likely transmission of Campylobacter from poultry to humans. We conducted a cross-sectional survey among 186 live poultry traders (LPTs) in 14 LBMs in a region with widespread backyard poultry systems. A pretested structured questionnaire was administered to all LPTs having regular contacts with poultry to gather market data and risk information on campylobacteriosis. Campylobacter was detected in individual cloacal cultures and identified through PCR. The median score obtained from the outcome of risk assessment dichotomized respondents into high and low risk categories. We performed logistic regression at 95% confidence interval (CI) to compare market characteristics and Campylobacter positivity to risk categories to identify LBM-associated public health risks. Markets had a median of 13 traders, and mean age of 46.3 ± 13.7 years. Majority 162/186 (87.1%) were males. Market behavioural processes by LPTs varied: Only 58.6% LPTs held bird species separate; onsite slaughter (38.7%); encountered sick-bird (93%) and dead-bird (83%) amidst limited health inspection (31.2%). Campylobacter positivity in live birds was 43/112 (38.4%, 95% CI: 29.4-48.1). Risk information on campylobacteriosis was low 41/114 (36%, 95% CI: 27.2-45.5). Sanitary risks were related to accumulation of litter (adjusted prevalence odds ratio [aPOR]: 19.67, 95% CI: 3.01-128.52). Accessing hand-wash facilities (aPOR: .32, 95% CI: .13-.78) and access to information (aPOR: .24, 95% CI: .09-.61) were protective. Sanitary risks were related to poor hygiene. LBMs could be central surveillance sites for Campylobacter. Public health authorities/actors should consider appropriate targeting to improve sanitary measures and Campylobacter control strategies.
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Affiliation(s)
- Josephat Mbai
- Kenya Field Epidemiology and Laboratory Training Program, Kenyatta Hospital Grounds, Nairobi, Kenya
- International Livestock Research Institute, Nairobi, Kenya
- Government of Makueni County, Makueni, Kenya
| | - Samuel Njoroge
- International Livestock Research Institute, Nairobi, Kenya
- Kenya Medical Research Institute KEMRI, Nairobi, Kenya
| | - Mark Obonyo
- Kenya Field Epidemiology and Laboratory Training Program, Kenyatta Hospital Grounds, Nairobi, Kenya
| | | | - Maurice Owiny
- Kenya Field Epidemiology and Laboratory Training Program, Kenyatta Hospital Grounds, Nairobi, Kenya
| | - Eric M Fèvre
- International Livestock Research Institute, Nairobi, Kenya
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, UK
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Wainaina M, Lindahl JF, Dohoo I, Mayer-Scholl A, Roesel K, Mbotha D, Roesler U, Grace D, Bett B, Al Dahouk S. Longitudinal Study of Selected Bacterial Zoonoses in Small Ruminants in Tana River County, Kenya. Microorganisms 2022; 10:microorganisms10081546. [PMID: 36013964 PMCID: PMC9414833 DOI: 10.3390/microorganisms10081546] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2022] [Revised: 07/20/2022] [Accepted: 07/22/2022] [Indexed: 11/19/2022] Open
Abstract
Brucellosis, Q fever, and leptospirosis are priority zoonoses worldwide, yet their epidemiology is understudied, and studies investigating multiple pathogens are scarce. Therefore, we selected 316 small ruminants in irrigated, pastoral, and riverine settings in Tana River County and conducted repeated sampling for animals that were initially seronegative between September 2014 and June 2015. We carried out serological and polymerase chain reaction tests and determined risk factors for exposure. The survey-weighted serological incidence rates were 1.8 (95% confidence intervals [CI]: 1.3–2.5) and 1.3 (95% CI: 0.7–2.3) cases per 100 animal-months at risk for Leptospira spp. and C. burnetii, respectively. We observed no seroconversions for Brucella spp. Animals from the irrigated setting had 6.83 (95% CI: 2.58–18.06, p-value = 0.01) higher odds of seropositivity to C. burnetii than those from riverine settings. Considerable co-exposure of animals to more than one zoonosis was also observed, with animals exposed to one zoonosis generally having 2.5 times higher odds of exposure to a second zoonosis. The higher incidence of C. burnetii and Leptospira spp. infections, which are understudied zoonoses in Kenya compared to Brucella spp., demonstrate the need for systematic prioritization of animal diseases to enable the appropriate allocation of resources.
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Affiliation(s)
- Martin Wainaina
- Department of Biological Safety, German Federal Institute for Risk Assessment, 12277 Berlin, Germany; (A.M.-S.); (S.A.D.)
- Department of Veterinary Medicine, Freie Universität Berlin, 14163 Berlin, Germany; (K.R.); (D.M.)
- Animal & Human Health Program, International Livestock Research Institute, Nairobi 00100, Kenya; (J.F.L.); (D.G.); (B.B.)
- Correspondence:
| | - Johanna F. Lindahl
- Animal & Human Health Program, International Livestock Research Institute, Nairobi 00100, Kenya; (J.F.L.); (D.G.); (B.B.)
- Zoonosis Science Center, Department of Medical Biochemistry and Microbiology, Uppsala University, 75237 Uppsala, Sweden
- Department of Clinical Sciences, Swedish University of Agricultural Sciences, 75007 Uppsala, Sweden
| | - Ian Dohoo
- Centre for Veterinary Epidemiologic Research, University of Prince Edward Island, Charlottetown, PE C1A 4P3, Canada;
| | - Anne Mayer-Scholl
- Department of Biological Safety, German Federal Institute for Risk Assessment, 12277 Berlin, Germany; (A.M.-S.); (S.A.D.)
| | - Kristina Roesel
- Department of Veterinary Medicine, Freie Universität Berlin, 14163 Berlin, Germany; (K.R.); (D.M.)
- Animal & Human Health Program, International Livestock Research Institute, Nairobi 00100, Kenya; (J.F.L.); (D.G.); (B.B.)
| | - Deborah Mbotha
- Department of Veterinary Medicine, Freie Universität Berlin, 14163 Berlin, Germany; (K.R.); (D.M.)
- Animal & Human Health Program, International Livestock Research Institute, Nairobi 00100, Kenya; (J.F.L.); (D.G.); (B.B.)
| | - Uwe Roesler
- Institute for Animal Hygiene and Environmental Health, Freie Universität Berlin, 14163 Berlin, Germany;
| | - Delia Grace
- Animal & Human Health Program, International Livestock Research Institute, Nairobi 00100, Kenya; (J.F.L.); (D.G.); (B.B.)
- Natural Resources Institute, University of Greenwich, Kent ME4 4TB, UK
| | - Bernard Bett
- Animal & Human Health Program, International Livestock Research Institute, Nairobi 00100, Kenya; (J.F.L.); (D.G.); (B.B.)
| | - Sascha Al Dahouk
- Department of Biological Safety, German Federal Institute for Risk Assessment, 12277 Berlin, Germany; (A.M.-S.); (S.A.D.)
- Department of Internal Medicine, RWTH Aachen University Hospital, 52074 Aachen, Germany
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13
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Cystic Echinococcosis: An Impact Assessment of Prevention Programs in Endemic Developing Countries in Africa, Central Asia, and South America. J ZOOL SYST EVOL RES 2022. [DOI: 10.1155/2022/8412718] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Background. Cystic echinococcosis (CE), caused by the tapeworm species, Echinococcus granulosus sensu stricto (G1), is one of many primary neglected zoonoses worldwide. Within endemic developing countries, CE has multiple effects on animal and human health and well-being. To address such effects, veterinary and human medical sector collaboration on prevention program delivery is essential. To begin preliminary evaluations of county specific prevention programs, a critically appraised topic (CAT) was conducted. It sought to answer: What impact do CE prevention programs have on human and animal disease prevalence, in populations living in endemic developing countries within Africa, Central Asia, and South America? Methodology. The aim was to assess the ability of prevention and control program outputs to produce measurable differences in health, social, and economic outcomes (e.g., improved access to medical services, positive behavioral change, or reduced treatment costs, respectively). Included articles were obtained using predefined inclusion/exclusion criteria from the four databases (CAB Abstracts and Global Health; the National Library of Medicine (PubMed); ScienceDirect; and WHO Institutional Repository of Information Sharing (IRIS)). The articles were appraised using three checklists: the Royal College of Veterinary Surgeons (RCVS), the Critical Appraisals Skills Programme (CASP), and the Joanna Briggs Institute checklists. Results. Ten articles were selected. Geographically, 20% of studies were conducted in South America, 30% in Africa, and 50% in Central Asia. For definitive hosts, dogs, CoproELISA antigen testing, before and after Praziquantel (PZQ) de-worming, was a primary focus. For humans, who are intermediate hosts (IH), disease surveillance methods, namely ultrasound (US), were commonly assessed. Whilst for sheep, also acting as IH, disease prevention methods, such as the EG95 livestock vaccine and de-worming farm dogs, were evaluated. Common to all studies were issues of program sustainability, in terms of regular human US screening, dog de-worming, and annual sheep vaccination. This was attributed to transient and remote human or animal populations; limited access to adequate roads or hospitals; few skilled health workers or veterinarians; an over-reliance on communities to administer preventatives; and limited resources. Conclusion. Despite variations in result validity and collection periods, useful comparisons of CE endemic countries produced key research and program recommendations. Future research recommendations included testing the significance of multiple program outcomes in relation to prevalence (e.g., the social outcome: behavioral change), further research on the impact of livestock vaccinations, and the CE transmission role of waterways and sanitation. Program recommendations included calculating and distinguishing between stray versus owned dog populations; formal representation of internal and external stakeholder interests through institutional organization; establishing sustainable guidelines around the frequency of PZQ and vaccination administration; improved veterinary-human medical training and resource sharing; and combined prevention methods and multiple canine disease management.
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He J, Guo Z, Yang P, Cao C, Xu J, Zhou X, Li S. Social insights on the implementation of One Health in zoonosis prevention and control: a scoping review. Infect Dis Poverty 2022; 11:48. [PMID: 35505361 PMCID: PMC9063255 DOI: 10.1186/s40249-022-00976-y] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2022] [Accepted: 04/18/2022] [Indexed: 11/18/2022] Open
Abstract
BACKGROUND The One Health (OH) concept has been promoted widely around the globe. OH framework is expected to be applied as an integrated approach to support addressing zoonotic diseases as a significant global health issue and to improve the efficiency and effectiveness of zoonosis prevention and control. This review is intended to overview the social impact of the implementation of OH on zoonosis prevention and control. METHODS A scoping review of studies in the past 10 years was performed to overview the integration feature of OH in zoonosis prevention and control and the social impacts of OH. PubMed and Web of Science were searched for studies published in English between January 2011 and June 2021. The included studies were selected based on predefined criteria. RESULTS Thirty-two studies were included in this review, and most of them adopted qualitative and semi-qualitative methods. More than 50% of the studies focused on zoonosis prevention and control. Most studies were conducted in low- and middle-income countries in Africa and Asia. Applying OH approach in diseases control integrates policymakers, stakeholders, and academics from various backgrounds. The impact of OH on economic is estimated that it may alleviate the burden of diseases and poverty in the long term, even though more financial support might be needed at the initial stage of OH implementation. OH implementation considers social and ecological factors related to zoonosis transmission and provides comprehensive strategies to assess and address related risks in different communities according to regions and customs. CONCLUSIONS Based on reviewed literature, although there seems to be a lack of guidelines for assessing and visualizing the outcomes of OH implementation, which may limit the large-scale adoption of it, evidence on the contributions of implementing OH concepts on zoonosis prevention and control indicates long-term benefits to society, including a better integration of politics, stakeholders and academics to improve their cooperation, a potential to address economic issues caused by zoonosis, and a comprehensive consideration on social determinants of health during zoonosis prevention and control.
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Affiliation(s)
- Junyi He
- National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention (Chinese Center for Tropical Diseases Research), NHC Key Laboratory of Parasite and Vector Biology, WHO Collaborating Centre for Tropical Diseases, National Center for International Research on Tropical Diseases, Shanghai, 200025 China
| | - Zhaoyu Guo
- National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention (Chinese Center for Tropical Diseases Research), NHC Key Laboratory of Parasite and Vector Biology, WHO Collaborating Centre for Tropical Diseases, National Center for International Research on Tropical Diseases, Shanghai, 200025 China
| | - Pin Yang
- National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention (Chinese Center for Tropical Diseases Research), NHC Key Laboratory of Parasite and Vector Biology, WHO Collaborating Centre for Tropical Diseases, National Center for International Research on Tropical Diseases, Shanghai, 200025 China
| | - Chunli Cao
- National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention (Chinese Center for Tropical Diseases Research), NHC Key Laboratory of Parasite and Vector Biology, WHO Collaborating Centre for Tropical Diseases, National Center for International Research on Tropical Diseases, Shanghai, 200025 China
| | - Jing Xu
- National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention (Chinese Center for Tropical Diseases Research), NHC Key Laboratory of Parasite and Vector Biology, WHO Collaborating Centre for Tropical Diseases, National Center for International Research on Tropical Diseases, Shanghai, 200025 China
| | - Xiaonong Zhou
- National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention (Chinese Center for Tropical Diseases Research), NHC Key Laboratory of Parasite and Vector Biology, WHO Collaborating Centre for Tropical Diseases, National Center for International Research on Tropical Diseases, Shanghai, 200025 China
- School of Global Health, Chinese Center for Tropical Diseases Research, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025 China
| | - Shizhu Li
- National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention (Chinese Center for Tropical Diseases Research), NHC Key Laboratory of Parasite and Vector Biology, WHO Collaborating Centre for Tropical Diseases, National Center for International Research on Tropical Diseases, Shanghai, 200025 China
- School of Global Health, Chinese Center for Tropical Diseases Research, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025 China
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15
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Worsley-Tonks KEL, Bender JB, Deem SL, Ferguson AW, Fèvre EM, Martins DJ, Muloi DM, Murray S, Mutinda M, Ogada D, Omondi GP, Prasad S, Wild H, Zimmerman DM, Hassell JM. Strengthening global health security by improving disease surveillance in remote rural areas of low-income and middle-income countries. Lancet Glob Health 2022; 10:e579-e584. [PMID: 35303467 PMCID: PMC8923676 DOI: 10.1016/s2214-109x(22)00031-6] [Citation(s) in RCA: 48] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2022] [Accepted: 01/20/2022] [Indexed: 01/19/2023]
Abstract
The COVID-19 pandemic has underscored the need to strengthen national surveillance systems to protect a globally connected world. In low-income and middle-income countries, zoonotic disease surveillance has advanced considerably in the past two decades. However, surveillance efforts often prioritise urban and adjacent rural communities. Communities in remote rural areas have had far less support despite having routine exposure to zoonotic diseases due to frequent contact with domestic and wild animals, and restricted access to health care. Limited disease surveillance in remote rural areas is a crucial gap in global health security. Although this point has been made in the past, practical solutions on how to implement surveillance efficiently in these resource-limited and logistically challenging settings have yet to be discussed. We highlight why investing in disease surveillance in remote rural areas of low-income and middle-income countries will benefit the global community and review current approaches. Using semi-arid regions in Kenya as a case study, we provide a practical approach by which surveillance in remote rural areas can be strengthened and integrated into existing systems. This Viewpoint represents a transition from simply highlighting the need for a more holistic approach to disease surveillance to a solid plan for how this outcome might be achieved.
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Affiliation(s)
| | - Jeff B Bender
- School of Public Health, University of Minnesota, Minneapolis, MN, USA
| | - Sharon L Deem
- Institute for Conservation Medicine, Saint Louis Zoo, Saint Louis, MO, USA
| | - Adam W Ferguson
- Gantz Family Collection Center, Field Museum of Natural History, Chicago, IL, USA
| | - Eric M Fèvre
- International Livestock Research Institute, Nairobi, Kenya; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, UK
| | - Dino J Martins
- Mpala Research Centre, Nanyuki, Kenya; Department of Ecology and Evolution, Princeton University, Princeton, NJ, USA
| | - Dishon M Muloi
- International Livestock Research Institute, Nairobi, Kenya; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, UK
| | - Suzan Murray
- Global Health Program, Smithsonian's National Zoo and Conservation Biology Institute, Washington, DC, USA
| | - Mathew Mutinda
- Veterinary Services Department, Kenya Wildlife Service, Nairobi, Kenya
| | - Darcy Ogada
- The Peregrine Fund, Boise, ID, USA; National Museums of Kenya, Nairobi, Kenya
| | - George P Omondi
- Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA; Ahadi Veterinary Resource Center, Nairobi, Kenya
| | - Shailendra Prasad
- Center for Global Health and Social Responsibility, University of Minnesota, Minneapolis, MN, USA
| | - Hannah Wild
- Department of Surgery, University of Washington, Seattle, WA, USA
| | - Dawn M Zimmerman
- Department of Clinical Studies, University of Nairobi, Nairobi, Kenya; Department of Epidemiology of Microbial Disease, Yale School of Public Health, New Haven, CT, USA
| | - James M Hassell
- Global Health Program, Smithsonian's National Zoo and Conservation Biology Institute, Washington, DC, USA; Department of Epidemiology of Microbial Disease, Yale School of Public Health, New Haven, CT, USA
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Shanbehzadeh M, Nopour R, Kazemi-Arpanahi H. Designing a standardized framework for data integration between zoonotic diseases systems: Towards one health surveillance. INFORMATICS IN MEDICINE UNLOCKED 2022. [DOI: 10.1016/j.imu.2022.100893] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022] Open
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17
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Shyaka A, Quinnell RJ, Rujeni N, Fèvre EM. Using a Value Chain Approach to Map the Pig Production System in Rwanda, Its Governance, and Sanitary Risks. Front Vet Sci 2022; 8:720553. [PMID: 35118148 PMCID: PMC8803899 DOI: 10.3389/fvets.2021.720553] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Accepted: 12/20/2021] [Indexed: 11/30/2022] Open
Abstract
Rwanda has a fast growing pig production sector projected to continue expansion, due to rising local and regional demand. We undertook a value chain analysis to establish the flows of pigs and pork in Rwanda and the roles of various actors involved, and to understand governance and sanitary risks in the value chain. Cross-sectional qualitative data were collected through focus group discussions and key informant interviews with farmers, brokers, butchers, abattoir managers, and veterinarians. Data were collected on pig production methods and inputs, the source and destination of live and slaughtered pigs, value-adding infrastructures (abattoirs and processing factories), the people involved and interactions between them, governance, and challenges. Pig production in Rwanda is dominated by smallholders, mainly as a source of supplementary income and secondarily for manure. Emerging medium-sized and large pig farms were also identified, located mainly around urban areas. Live pig markets are the main mechanism allowing various actors to buy/sell pigs. Brokers have an important role in pig transactions: they are key in setting prices at markets, examining pigs for disease, organising the supply of pigs for abattoirs and for export. Only a few formal pig abattoirs were identified, which mainly supply to pork processing factories based in Kigali and/or export to customers. Local consumers rely on informal slaughtering at farm or bar/restaurant backyards, with irregular veterinary inspection. Formal abattoirs were attended by a veterinary inspector, however a lack of record keeping was noted. Sanitary risks identified were a lack of biosecurity throughout the chain and poor hygiene at slaughter places. Lingual palpation was practised in pig markets to identify cysticercosis infection, however cyst-positive pigs were not destroyed, but were sold for reduced prices in the same market or later informally sold by the owner. There are few veterinarians attending farms, with most services provided by less qualified technicians or self-treatment of pigs by farmers. Overall, this production system is characterised by a high degree of informality at all nodes, combined with the rapid growth trajectory in the sector. These findings provide a basis to plan interventions tailored to vulnerabilities identified in the Rwanda pig value chain.
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Affiliation(s)
- Anselme Shyaka
- Faculty of Biological Sciences, School of Biology, University of Leeds, Leeds, United Kingdom
- School of Veterinary Medicine, College of Agriculture, Animal Sciences and Veterinary Medicine, University of Rwanda, Nyagatare, Rwanda
- Center for One Health, University of Global Health Equity, Kigali, Rwanda
- *Correspondence: Anselme Shyaka
| | - Rupert J. Quinnell
- Faculty of Biological Sciences, School of Biology, University of Leeds, Leeds, United Kingdom
- Rupert J. Quinnell
| | - Nadine Rujeni
- School of Health Sciences, College of Medicine and Health Sciences, University of Rwanda, Kigali, Rwanda
| | - Eric M. Fèvre
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Leeds, United Kingdom
- International Livestock Research Institute, Nairobi, Kenya
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18
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Mutwiri T, Magambo J, Zeyhle E, Muigai AWT, Alumasa L, Amanya F, Fèvre EM, Falzon LC. Findings of a community screening programme for human cystic echinococcosis in a non-endemic area. PLOS GLOBAL PUBLIC HEALTH 2022; 2:e0000235. [PMID: 36962714 PMCID: PMC10022381 DOI: 10.1371/journal.pgph.0000235] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2021] [Accepted: 07/01/2022] [Indexed: 11/19/2022]
Abstract
Cystic Echinococcosis (CE) is a zoonosis caused by infection with the larval stages of the taeniid cestodes of the species complex Echinococcus granulosus sensu lato. It is prevalent among transhumant communities in East Africa, including those residing in northern Kenya. The movement of livestock from these regions of high incidence to areas of low incidence creates an indirect risk of disease spill-over to humans. To assess possible establishment of the CE life cycle outside known endemic regions, we used a portable ultrasound scanner to screen for the presence of human CE in Bungoma County of western Kenya, an area which imports substantial numbers of cattle for slaughter from neighbouring pastoralist regions. Eight sentinel sites were purposively selected based on their proximity to slaughterhouses handling animals introduced from pastoralist regions, and necessary permissions to conduct the study were sought. Regression analyses were conducted to identify risk factors associated with the presence of abdominal and cystic lesions (CL). In total, 1002 participants were screened; of these, 654 (65.3%) were female and the median age was 43. Farming (n = 403; 43.4%) was the most frequent occupation, followed by professional (i.e. on regular salary) (n = 215; 23.1%), and business (n = 207; 22.3%) categories. Sixty-seven participants (6.7%) had abnormal ultrasound findings, of these, 7 (1.1%) had simple liver cysts/CL, as per WHO classification. As such, their outcome was inconclusive and they were not put on treatment but advised to attend follow-up investigations in a referral health facility. Other abnormal findings included splenomegaly (n = 14), ovarian cysts (n = 14), uterine fibroids (n = 10), polycystic kidneys (n = 6), and benign prostatic hyperplasia (n = 6). Age was unconditionally associated with the presence of presumptive CL. These results contribute to CE baseline data while providing insights on the implementation of ultrasound diagnosis in the field, as recommended by the WHO for targeted control of echinococcosis by 2030.
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Affiliation(s)
- Titus Mutwiri
- Jomo Kenyatta University of Agriculture and Technology, Nairobi, Kenya
- International Livestock Research Institute, Nairobi, Kenya
- Kenya Methodist University, Nairobi, Kenya
| | | | | | - Anne W T Muigai
- Jomo Kenyatta University of Agriculture and Technology, Nairobi, Kenya
| | - Lorren Alumasa
- International Livestock Research Institute, Nairobi, Kenya
| | | | - Eric M Fèvre
- International Livestock Research Institute, Nairobi, Kenya
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom
| | - Laura C Falzon
- International Livestock Research Institute, Nairobi, Kenya
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom
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19
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Chiuya T, Villinger J, Masiga DK, Ondifu DO, Murungi MK, Wambua L, Bastos ADS, Fèvre EM, Falzon LC. Molecular prevalence and risk factors associated with tick-borne pathogens in cattle in western Kenya. BMC Vet Res 2021; 17:363. [PMID: 34838023 PMCID: PMC8627057 DOI: 10.1186/s12917-021-03074-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2021] [Accepted: 11/05/2021] [Indexed: 11/29/2022] Open
Abstract
Background Tick-borne pathogens (TBPs) are of global importance, especially in sub-Saharan Africa where they represent a major constraint to livestock production. Their association with human disease is also increasingly recognized, signalling their zoonotic importance. It is therefore crucial to investigate TBPs prevalence in livestock populations and the factors associated with their presence. We set out to identify TBPs present in cattle and to determine associated risk factors in western Kenya, where smallholder livestock production is important for subsistence and market-driven income. Results Tick-borne pathogen infections in blood samples collected from cattle at livestock markets and slaughterhouses between May 2017 and January 2019 were identified by high-resolution melting analysis and sequencing of PCR products of genus-specific primers. Of the 422 cattle sampled, 30.1% (127/422) were infected with at least one TBP, while 8.8% (37/422) had dual infections. Anaplasma spp. (19.7%) were the most prevalent, followed by Theileria (12.3%), Ehrlichia (6.6%), and Babesia (0.2%) spp. Sequence analysis of the TBPs revealed them to be Anaplasma platys-like organisms (13.5%), Theileria velifera (7.4%), Anaplasma marginale (4.9%), Theileria mutans (3.1%), Theileria parva (1.6%), and Babesia bigemina (0.2%). Ehrlichia ruminantium, Rickettsia spp., and arboviruses were not detected. Exotic breeds of cattle were more likely to be infected with A. marginale compared to local breeds (OR: 7.99, 95% CI: 3.04–22.02, p < 0.001). Presence of ticks was a significant predictor for Anaplasma spp. (OR: 2.18, 95% CI: 1.32–3.69, p = 0.003) and Ehrlichia spp. (OR: 2.79, 95% CI: 1.22–7.23, p = 0.022) infection. Cattle sampled at slaughterhouses were more likely to be positive for Anaplasma spp. (OR: 1.64, 95% CI: 1.01–2.70, p = 0.048) and A. marginale (OR: 3.84, 95% CI: 1.43–12.21, p = 0.012), compared to those sampled at livestock markets. Conclusion This study reports TBP prevalence and associated risk factors in western Kenya, factors which are key to informing surveillance and control measures.
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Affiliation(s)
- Tatenda Chiuya
- International Centre of Insect Physiology and Ecology (icipe), P.O Box 30772-00100, Nairobi, Kenya. .,Department of Zoology and Entomology, University of Pretoria, Private Bag 20, Pretoria, 0028, South Africa.
| | - Jandouwe Villinger
- International Centre of Insect Physiology and Ecology (icipe), P.O Box 30772-00100, Nairobi, Kenya
| | - Daniel K Masiga
- International Centre of Insect Physiology and Ecology (icipe), P.O Box 30772-00100, Nairobi, Kenya
| | - Dickens O Ondifu
- International Centre of Insect Physiology and Ecology (icipe), P.O Box 30772-00100, Nairobi, Kenya
| | - Maurice K Murungi
- International Livestock Research Institute, Old Naivasha Road, P.O Box 30709, Nairobi, 00100, Kenya
| | - Lillian Wambua
- International Livestock Research Institute, Old Naivasha Road, P.O Box 30709, Nairobi, 00100, Kenya
| | - Armanda D S Bastos
- Department of Zoology and Entomology, University of Pretoria, Private Bag 20, Pretoria, 0028, South Africa
| | - Eric M Fèvre
- International Livestock Research Institute, Old Naivasha Road, P.O Box 30709, Nairobi, 00100, Kenya.,Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Leahurst Campus, Chester High Road, Neston, CH64 7TE, UK
| | - Laura C Falzon
- International Livestock Research Institute, Old Naivasha Road, P.O Box 30709, Nairobi, 00100, Kenya. .,Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Leahurst Campus, Chester High Road, Neston, CH64 7TE, UK.
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20
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Kemp SA, Pinchbeck GL, Fèvre EM, Williams NJ. A Cross-Sectional Survey of the Knowledge, Attitudes, and Practices of Antimicrobial Users and Providers in an Area of High-Density Livestock-Human Population in Western Kenya. Front Vet Sci 2021; 8:727365. [PMID: 34621809 PMCID: PMC8490823 DOI: 10.3389/fvets.2021.727365] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2021] [Accepted: 08/24/2021] [Indexed: 11/18/2022] Open
Abstract
Background: Antimicrobial resistance (AMR) is one of the most important global health crises in recent times and is driven primarily by antimicrobial consumption. In East Africa, there is a paucity of data regarding the knowledge, attitudes, and practices (KAP) related to antimicrobial use (AMU). We investigate the ways in which antimicrobial users in the veterinary sector accessed veterinary antimicrobials, and common behaviors of veterinary antimicrobial users and prescribers associated with AMU and AMR. Methods: In total, 70 farmers, staff at 49 agricultural-veterinary antimicrobial shops (agrovet staff) and 28 veterinary animal healthcare workers or veterinary surgeons (veterinary professionals) were interviewed in Busia county, western Kenya in 2016 using a standard questionnaire as a framework for structured interviews. Data recorded included participant demographics, level of education, access to and sources of veterinary antimicrobials, prescribing patterns, and knowledge of AMR and antimicrobial withdrawal periods. Results: The majority of antimicrobials were accessed through informal means, purchased from agroveterinary shops; more than half of staff did not hold nationally mandated qualifications to advise on or sell veterinary antimicrobials. Approximately 40% of veterinary antimicrobials were sold without a prescription and it was noted that both price and customer preference were important factors when selling antimicrobials in almost all agrovet shops. Knowledge of the dangers associated with AMR and AMU were mostly superficial. Treatment failure occurred often, and there was a lack of differentiation between AMR and simply treatment failure. Conclusion: In this study area in East Africa with high-density human and livestock populations, AMU was primarily for maintenance of livestock health. These findings have highlighted several aspects surrounding inappropriate access to antimicrobials, and as such require attention from policy makers concerned with AMR in both livestock and human medicine sectors. Improving prescribing practices and ensuring a minimum level of general education and awareness of prescribers, as well as expanding the role of agrovet staff in antimicrobial stewardship programmes, may help begin to mitigate the maintenance and transmission of AMR, particularly amongst livestock.
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Affiliation(s)
- Steven A Kemp
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom.,Division of Infection and Immunity, University College London, London, United Kingdom.,Department of Medicine, University of Cambridge, Cambridge, United Kingdom
| | - Gina L Pinchbeck
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom
| | - Eric M Fèvre
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom.,International Livestock Research Institute, Nairobi, Kenya
| | - Nicola J Williams
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom
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21
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Falzon LC, Ogola JG, Odinga CO, Naboyshchikov L, Fèvre EM, Berezowski J. Electronic data collection to enhance disease surveillance at the slaughterhouse in a smallholder production system. Sci Rep 2021; 11:19447. [PMID: 34593856 PMCID: PMC8484591 DOI: 10.1038/s41598-021-98495-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Accepted: 09/09/2021] [Indexed: 11/09/2022] Open
Abstract
Globally, meat inspection provides data for animal health surveillance. However, paper-based recording of data is often not reported through to higher authorities in sufficient detail. We trialled the use of an electronic meat inspection form in Kenyan slaughterhouses, in lieu of the currently used paper-based format. Meat inspectors in two ruminant slaughterhouses completed and submitted an electronic report for each animal slaughtered at their facility. The reports, which captured information on the animal demographics and any eventual condemnations, were stored in a central database and available in real-time. A stakeholder meeting was held towards the end of the study. Over the 2.75 year study period, 16,386 reports were submitted; a downward linear trend in the monthly submissions was noted. There was a week effect, whereby more reports were submitted on the market day. Of the slaughtered animals, 23% had at least a partial condemnation. The most frequently condemned organs were the liver, lungs and intestines; the primary reasons for condemnations were parasitic conditions. Lack of feedback and difficulty capturing animal origin information were the primary challenges highlighted. The study demonstrated that electronic data capture is feasible in such challenging environments, thereby improving the timeliness and resolution of the data collected.
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Affiliation(s)
- Laura C Falzon
- Institute of Infection, Veterinary, and Ecological Sciences, University of Liverpool, Liverpool, UK. .,International Livestock Research Institute, Nairobi, Kenya.
| | - Joseph G Ogola
- International Livestock Research Institute, Nairobi, Kenya.,Veterinary Department, Bungoma County Government, Bungoma, Kenya
| | | | | | - Eric M Fèvre
- Institute of Infection, Veterinary, and Ecological Sciences, University of Liverpool, Liverpool, UK. .,International Livestock Research Institute, Nairobi, Kenya.
| | - John Berezowski
- Veterinary Public Health Institute, University of Bern, Bern, Switzerland
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22
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Cook EAJ, de Glanville WA, Thomas LF, Kiyong'a A, Kivali V, Kariuki S, Bronsvoort BMDC, Fèvre EM. Evidence of exposure to C. burnetii among slaughterhouse workers in western Kenya. One Health 2021; 13:100305. [PMID: 34430697 PMCID: PMC8367830 DOI: 10.1016/j.onehlt.2021.100305] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2021] [Revised: 08/06/2021] [Accepted: 08/06/2021] [Indexed: 12/02/2022] Open
Abstract
Q fever, caused by C. burnetii, has been reported in slaughterhouse workers worldwide. The most reported risk factor for seropositivity is the workers' role in the slaughterhouse. This study examined the seroprevalence and risk factors for antibodies to C. burnetii in slaughterhouse workers in western Kenya to fill a data gap relating to this emerging disease in East Africa. Individuals were recruited from all consenting slaughterhouses in the study area between February and November 2012. Information was collected from participating workers regarding demographic data, animals slaughtered and role in the slaughterhouse. Sera samples were screened for antibodies to C. burnetii using a commercial ELISA and risk factors associated with seropositivity were identified using multi-level logistic regression analysis. Slaughterhouse workers (n = 566) were recruited from 84 ruminant slaughterhouses in western Kenya. The seroprevalence of antibodies to C. burnetii was 37.1% (95% Confidence Interval (CI) 33.2–41.2%). The risk factors identified for C. burnetii seropositivity included: male workers compared to female workers, odds ratio (OR) 5.40 (95% CI 1.38–21.22); slaughtering cattle and small ruminants compared to those who only slaughtered cattle, OR 1.52 (95% CI 1.06–2.19). In addition, specific roles in the slaughterhouse were associated with increased odds of being seropositive, including cleaning the slaughterhouse, OR 3.98 (95% CI 1.39–11.43); cleaning the intestines, OR 3.24 (95% CI 1.36–7.73); and flaying the carcass OR 2.63 (95% CI 1.46–4.75) compared to being the slaughterman or foreman. We identified that slaughterhouse workers have a higher seroprevalence of antibodies to C. burnetii compared to published values in the general population from the same area. Slaughterhouse workers therefore represent an occupational risk group in this East African setting. Workers with increased contact with the viscera and fluids are at higher risk for exposure to C. burnetii. Education of workers may reduce transmission, but an alternative approach may be to consider the benefits of vaccination in high-risk groups.
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Affiliation(s)
| | - William Anson de Glanville
- International Livestock Research Institute, Old Naivasha Road, PO Box 30709, 00100 Nairobi, Kenya.,Center for One Health, University of Global Health Equity, Rwanda
| | - Lian Francesca Thomas
- International Livestock Research Institute, Old Naivasha Road, PO Box 30709, 00100 Nairobi, Kenya.,Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Leahurst Campus, Chester High Road, Neston CH64 7TE, UK
| | - Alice Kiyong'a
- International Livestock Research Institute, Old Naivasha Road, PO Box 30709, 00100 Nairobi, Kenya
| | - Velma Kivali
- International Livestock Research Institute, Old Naivasha Road, PO Box 30709, 00100 Nairobi, Kenya
| | - Samuel Kariuki
- Kenya Medical Research Institute, PO Box 19464-00200, Nairobi, Kenya
| | - Barend Mark de Clare Bronsvoort
- Roslin Institute, The Royal (Dick) School of Veterinary Studies, University of Edinburgh, Roslin, Midlothian EH25 9RG, UK.,Royal (Dick) School of Veterinary Studies, University of Edinburgh, Roslin, Midlothian EH25 9RG, UK
| | - Eric Maurice Fèvre
- International Livestock Research Institute, Old Naivasha Road, PO Box 30709, 00100 Nairobi, Kenya.,Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Leahurst Campus, Chester High Road, Neston CH64 7TE, UK
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23
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Sandberg M, Hesp A, Aenishaenslin C, Bordier M, Bennani H, Bergwerff U, Chantziaras I, De Meneghi D, Ellis-Iversen J, Filippizi ME, Mintiens K, Nielsen LR, Norström M, Tomassone L, van Schaik G, Alban L. Assessment of Evaluation Tools for Integrated Surveillance of Antimicrobial Use and Resistance Based on Selected Case Studies. Front Vet Sci 2021; 8:620998. [PMID: 34307513 PMCID: PMC8298032 DOI: 10.3389/fvets.2021.620998] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2020] [Accepted: 05/21/2021] [Indexed: 01/18/2023] Open
Abstract
Regular evaluation of integrated surveillance for antimicrobial use (AMU) and resistance (AMR) in animals, humans, and the environment is needed to ensure system effectiveness, but the question is how. In this study, six different evaluation tools were assessed after being applied to AMU and AMR surveillance in eight countries: (1) ATLASS: the Assessment Tool for Laboratories and AMR Surveillance Systems developed by the Food and Agriculture Organization (FAO) of the United Nations, (2) ECoSur: Evaluation of Collaboration for Surveillance tool, (3) ISSEP: Integrated Surveillance System Evaluation Project, (4) NEOH: developed by the EU COST Action "Network for Evaluation of One Health," (5) PMP-AMR: The Progressive Management Pathway tool on AMR developed by the FAO, and (6) SURVTOOLS: developed in the FP7-EU project "RISKSUR." Each tool was scored using (i) 11 pre-defined functional aspects (e.g., workability concerning the need for data, time, and people); (ii) a strengths, weaknesses, opportunities, and threats (SWOT)-like approach of user experiences (e.g., things that I liked or that the tool covered well); and (iii) eight predefined content themes related to scope (e.g., development purpose and collaboration). PMP-AMR, ATLASS, ECoSur, and NEOH are evaluation tools that provide a scoring system to obtain semi-quantitative results, whereas ISSEP and SURVTOOLS will result in a plan for how to conduct evaluation(s). ISSEP, ECoSur, NEOH, and SURVTOOLS allow for in-depth analyses and therefore require more complex data, information, and specific training of evaluator(s). PMP-AMR, ATLASS, and ISSEP were developed specifically for AMR-related activities-only ISSEP included production of a direct measure for "integration" and "impact on decision making." NEOH and ISSEP were perceived as the best tools for evaluation of One Health (OH) aspects, and ECoSur as best for evaluation of the quality of collaboration. PMP-AMR and ATLASS seemed to be the most user-friendly tools, particularly designed for risk managers. ATLASS was the only tool focusing specifically on laboratory activities. Our experience is that adequate resources are needed to perform evaluation(s). In most cases, evaluation would require involvement of several assessors and/or stakeholders, taking from weeks to months to complete. This study can help direct future evaluators of integrated AMU and AMR surveillance toward the most adequate tool for their specific evaluation purpose.
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Affiliation(s)
- Marianne Sandberg
- Department for Food Safety, Veterinary Issues and Risk Analysis, Danish Agriculture and Food Council, Copenhagen, Denmark
- National Food Institute, Technical University of Denmark, Lyngby, Denmark
| | - Ayla Hesp
- Department of Bacteriology and Epidemiology, Host Pathogen Interaction and Diagnostics Development, Wageningen Bioveterinary Research, Lelystad, Netherlands
- Department of Infectious Diseases and Immunology, Utrecht University, Utrecht, Netherlands
| | - Cécile Aenishaenslin
- Groupe de recherche en épidémiologie des zoonoses et santé publique, Université de Montréal, Saint-Hyacinthe, QC, Canada
| | - Marion Bordier
- UMR Astre, Cirad, INRAE, University of Montpellier, Montpellier, France
| | - Houda Bennani
- Veterinary Epidemiology, Economics and Public Health Group, Department of Pathobiology and Population Sciences, Royal Veterinary College, London, United Kingdom
| | - Ursula Bergwerff
- Department of Farm Animal Health, Utrecht University, Utrecht, Netherlands
| | - Ilias Chantziaras
- Unit of Animal Science and Unit of Social Science, Flanders Research Institute for Agriculture, Fisheries and Food (ILVO), Merelbeke, Belgium
- Department of Reproduction, Obstetrics and Herd Health, University of Ghent, Ghent, Belgium
| | | | | | - Maria-Eleni Filippizi
- Veterinary Epidemiology Unit, Department of Epidemiology and Public Health, Sciensano, Brussels, Belgium
| | - Koen Mintiens
- Food and Agriculture Organization of the United Nations, Rome, Italy
| | - Liza R. Nielsen
- Department of Veterinary and Animal Sciences, University of Copenhagen, Frederiksberg, Denmark
| | - Madelaine Norström
- Department of Epidemiology, Norwegian Veterinary Institute, Oslo, Norway
| | - Laura Tomassone
- Department of Veterinary Sciences, University of Turin, Turin, Italy
| | - Gerdien van Schaik
- Department of Farm Animal Health, Utrecht University, Utrecht, Netherlands
- Royal GD Animal Health, Deventer, Netherlands
| | - Lis Alban
- Department for Food Safety, Veterinary Issues and Risk Analysis, Danish Agriculture and Food Council, Copenhagen, Denmark
- Department of Veterinary and Animal Sciences, University of Copenhagen, Frederiksberg, Denmark
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24
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Keshavamurthy R, Thumbi SM, Charles LE. Digital Biosurveillance for Zoonotic Disease Detection in Kenya. Pathogens 2021; 10:pathogens10070783. [PMID: 34206236 PMCID: PMC8308926 DOI: 10.3390/pathogens10070783] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2021] [Revised: 06/15/2021] [Accepted: 06/18/2021] [Indexed: 11/16/2022] Open
Abstract
Infectious disease surveillance is crucial for early detection and situational awareness of disease outbreaks. Digital biosurveillance monitors large volumes of open-source data to flag potential health threats. This study investigates the potential of digital surveillance in the detection of the top five priority zoonotic diseases in Kenya: Rift Valley fever (RVF), anthrax, rabies, brucellosis, and trypanosomiasis. Open-source disease events reported between August 2016 and October 2020 were collected and key event-specific information was extracted using a newly developed disease event taxonomy. A total of 424 disease reports encompassing 55 unique events belonging to anthrax (43.6%), RVF (34.6%), and rabies (21.8%) were identified. Most events were first reported by news media (78.2%) followed by international health organizations (16.4%). News media reported the events 4.1 (±4.7) days faster than the official reports. There was a positive association between official reporting and RVF events (odds ratio (OR) 195.5, 95% confidence interval (CI); 24.01-4756.43, p < 0.001) and a negative association between official reporting and local media coverage of events (OR 0.03, 95% CI; 0.00-0.17, p = 0.030). This study highlights the usefulness of local news in the detection of potentially neglected zoonotic disease events and the importance of digital biosurveillance in resource-limited settings.
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Affiliation(s)
- Ravikiran Keshavamurthy
- Paul G. Allen School for Global Animal Health, Washington State University, Pullman, WA 99164, USA; (R.K.); (S.M.T.)
- Pacific Northwest National Laboratory, Richland, WA 99354, USA
| | - Samuel M. Thumbi
- Paul G. Allen School for Global Animal Health, Washington State University, Pullman, WA 99164, USA; (R.K.); (S.M.T.)
- Center for Epidemiological Modelling and Analysis, Institute of Tropical and Infectious Diseases, University of Nairobi, Nairobi 30197, Kenya
- Institute of Immunology and Infection Research, University of Edinburgh, Edinburgh EH9 3FL, UK
| | - Lauren E. Charles
- Paul G. Allen School for Global Animal Health, Washington State University, Pullman, WA 99164, USA; (R.K.); (S.M.T.)
- Pacific Northwest National Laboratory, Richland, WA 99354, USA
- Correspondence:
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25
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Thomas LF, Rushton J, Bukachi SA, Falzon LC, Howland O, Fèvre EM. Cross-Sectoral Zoonotic Disease Surveillance in Western Kenya: Identifying Drivers and Barriers Within a Resource Constrained Setting. Front Vet Sci 2021; 8:658454. [PMID: 34169106 PMCID: PMC8217437 DOI: 10.3389/fvets.2021.658454] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2021] [Accepted: 05/05/2021] [Indexed: 12/05/2022] Open
Abstract
Background: Collaboration between the human and animal health sectors, including the sharing of disease surveillance data, has the potential to improve public health outcomes through the rapid detection of zoonotic disease events prior to widespread transmission in humans. Kenya has been at the forefront of embracing a collaborative approach in Africa with the inception of the Zoonotic Disease Unit in 2011. Joint outbreak responses have been coordinated at the national level, yet little is currently documented on cross-sectoral collaboration at the sub-national level. Methods: Key informant interviews were conducted with 28 disease surveillance officers from the human and animal health sectors in three counties in western Kenya. An inductive process of thematic analysis was used to identify themes relating to barriers and drivers for cross-sectoral collaboration. Results: The study identified four interlinking themes related to drivers and barriers for cross-sectoral collaboration. To drive collaboration at the sub-national level there needs to be a clear identification of “common objectives,” as currently exemplified by the response to suspected rabies and anthrax cases and routine meat hygiene activities. The action of collaboration, be it integrated responses to outbreaks or communication and data sharing, require “operational structures” to facilitate them, including the formalisation of reporting lines, supporting legislation and the physical infrastructure, from lab equipment to mobile phones, to facilitate the activities. These structures in turn require “appropriate resources” to support them, which will be allocated based on the “political will” of those who control the resources. Conclusions: Ongoing collaborations between human and animal disease surveillance officers at the sub-national level were identified, driven by common objectives such as routine meat hygiene and response to suspected rabies and anthrax cases. In these areas a suitable operational structure is present, including a supportive legislative framework and clearly designated roles for officers within both sectors. There was support from disease surveillance officers to increase their collaboration, communication and data sharing across sectors, yet this is currently hindered by the lack of these formal operational structures and poor allocation of resources to disease surveillance. It was acknowledged that improving this resource allocation will require political will at the sub-national, national and international levels.
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Affiliation(s)
- Lian Francesca Thomas
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Leahurst Campus, Neston, United Kingdom.,International Livestock Research Institute, Nairobi, Kenya
| | - Jonathan Rushton
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Leahurst Campus, Neston, United Kingdom.,Centre of Excellence for Sustainable Food Systems, University of Liverpool, Liverpool, United Kingdom
| | - Salome A Bukachi
- Institute of Anthropology, Gender & African Studies, University of Nairobi, Nairobi, Kenya
| | - Laura C Falzon
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Leahurst Campus, Neston, United Kingdom.,International Livestock Research Institute, Nairobi, Kenya
| | - Olivia Howland
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Leahurst Campus, Neston, United Kingdom.,International Livestock Research Institute, Nairobi, Kenya
| | - Eric M Fèvre
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Leahurst Campus, Neston, United Kingdom.,International Livestock Research Institute, Nairobi, Kenya.,Centre of Excellence for Sustainable Food Systems, University of Liverpool, Liverpool, United Kingdom
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26
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Chiuya T, Masiga DK, Falzon LC, Bastos ADS, Fèvre EM, Villinger J. A survey of mosquito-borne and insect-specific viruses in hospitals and livestock markets in western Kenya. PLoS One 2021; 16:e0252369. [PMID: 34048473 PMCID: PMC8162702 DOI: 10.1371/journal.pone.0252369] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Accepted: 05/15/2021] [Indexed: 11/18/2022] Open
Abstract
Aedes aegypti and Culex pipiens complex mosquitoes are prolific vectors of arboviruses that are a global threat to human and animal health. Increased globalization and ease of travel have facilitated the worldwide dissemination of these mosquitoes and the viruses they transmit. To assess disease risk, we determined the frequency of arboviruses in western Kenyan counties bordering an area of high arboviral activity. In addition to pathogenic viruses, insect-specific flaviviruses (ISFs), some of which are thought to impair the transmission of specific pathogenic arboviruses, were also evaluated. We trapped mosquitoes in the short and long rainy seasons in 2018 and 2019 at livestock markets and hospitals. Mosquitoes were screened for dengue, chikungunya and other human pathogenic arboviruses, ISFs, and their blood-meal sources as determined by high-resolution melting analysis of (RT-)PCR products. Of 6,848 mosquitoes collected, 89% were trapped during the long rainy season, with A. aegypti (59%) and Cx. pipiens sensu lato (40%) being the most abundant. Most blood-fed mosquitoes were Cx. pipiens s.l. with blood-meals from humans, chicken, and sparrow (Passer sp.). We did not detect dengue or chikungunya viruses. However, one Culex poicilipes female was positive for Sindbis virus, 30 pools of Ae. aegypti had cell fusing agent virus (CFAV; infection rate (IR) = 1.27%, 95% CI = 0.87%-1.78%); 11 pools of Ae. aegypti had Aedes flavivirus (AeFV; IR = 0.43%, 95% CI = 0.23%-0.74%); and seven pools of Cx. pipiens s.l. (IR = 0.23%, 95% CI = 0.1%-0.45%) and one pool of Culex annulioris had Culex flavivirus. Sindbis virus, which causes febrile illness in humans, can complicate the diagnosis and prognosis of patients with fever. The presence of Sindbis virus in a single mosquito from a population of mosquitoes with ISFs calls for further investigation into the role ISFs may play in blocking transmission of other arboviruses in this region.
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Affiliation(s)
- Tatenda Chiuya
- International Centre of Insect Physiology and Ecology (icipe), Nairobi, Kenya
- Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
- * E-mail: , (TC); (JV)
| | - Daniel K. Masiga
- International Centre of Insect Physiology and Ecology (icipe), Nairobi, Kenya
| | - Laura C. Falzon
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Neston, United Kingdom
- International Livestock Research Institute, Nairobi, Kenya
| | - Armanda D. S. Bastos
- Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - Eric M. Fèvre
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Neston, United Kingdom
- International Livestock Research Institute, Nairobi, Kenya
| | - Jandouwe Villinger
- International Centre of Insect Physiology and Ecology (icipe), Nairobi, Kenya
- * E-mail: , (TC); (JV)
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27
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Muinde P, Bettridge JM, Sousa FM, Dürr S, Dohoo IR, Berezowski J, Mutwiri T, Odinga CO, Fèvre EM, Falzon LC. Who let the dogs out? Exploring the spatial ecology of free-roaming domestic dogs in western Kenya. Ecol Evol 2021; 11:4218-4231. [PMID: 33976805 PMCID: PMC8093722 DOI: 10.1002/ece3.7317] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2020] [Revised: 01/22/2021] [Accepted: 01/26/2021] [Indexed: 11/23/2022] Open
Abstract
The spatial ecology of free-roaming dogs determines their role in the transmission of zoonoses. This study describes the geographic range of and identifies sites frequently visited by free-roaming domestic dogs in western Kenya. Eight sites in Busia county, western Kenya, were selected. At each site, ten dog-keeping households were recruited, a questionnaire was administered, and a GPS logger was fixed around the neck of one dog in each household. Loggers were programmed to capture the dog's position every minute, for five consecutive days. Individual summaries of GPS recordings were produced, and the daily distance traveled was calculated. 50% and 95% utilization distribution isopleths were produced, and the area within these isopleths was extracted to estimate the size of the core and extended Home Ranges (HRs), respectively. Linear regression analyses were performed to identify factors associated with the movement parameters. The centroid points of the 10, 50, and 90% isopleths were reproduced, and the corresponding sites identified on the ground. Seventy-three dogs were included in the final analyses. The median daily distance traveled was 13.5km, while the median core and extended HRs were 0.4 and 9.3 ha, respectively. Older dogs had a larger extended HR and traveled more daily, while the effect of sex on dog movement depended on their neutering status. Dogs spent most of their time at their household; other frequently visited sites included other household compounds, fields, and rubbish dumps. One of the centroids corresponded to a field located across the international Kenya-Uganda border, emphasizing the fluidity across the border in this ecosystem. Multiple dogs visited the same location, highlighting the heterogeneous contact networks between dogs, and between dogs and people. The field data presented are of value both in understanding domestic dog ecology and resource utilization, and in contextualizing infectious and parasitic disease transmission models.
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Affiliation(s)
- Patrick Muinde
- International Livestock Research InstituteNairobiKenya
- Present address:
World Animal ProtectionNairobiKenya
| | - Judy M. Bettridge
- International Livestock Research InstituteNairobiKenya
- Institute of Infection, Veterinary, and Ecological SciencesUniversity of LiverpoolLiverpoolUK
- Present address:
Natural Resources InstituteUniversity of GreenwichChatham MaritimeUK
| | - Filipe M. Sousa
- Veterinary Public Health InstituteUniversity of BernBernSwitzerland
| | - Salome Dürr
- Veterinary Public Health InstituteUniversity of BernBernSwitzerland
| | - Ian R. Dohoo
- Atlantic Veterinary CollegeUniversity of Prince Edward IslandCharlottetownCanada
| | - John Berezowski
- Veterinary Public Health InstituteUniversity of BernBernSwitzerland
| | - Titus Mutwiri
- International Livestock Research InstituteNairobiKenya
- Jomo Kenyatta University of Agriculture and TechnologyNairobiKenya
| | | | - Eric M. Fèvre
- International Livestock Research InstituteNairobiKenya
- Institute of Infection, Veterinary, and Ecological SciencesUniversity of LiverpoolLiverpoolUK
| | - Laura C. Falzon
- International Livestock Research InstituteNairobiKenya
- Institute of Infection, Veterinary, and Ecological SciencesUniversity of LiverpoolLiverpoolUK
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George J, Häsler B, Komba E, Sindato C, Rweyemamu M, Mlangwa J. Towards an integrated animal health surveillance system in Tanzania: making better use of existing and potential data sources for early warning surveillance. BMC Vet Res 2021; 17:109. [PMID: 33676498 PMCID: PMC7936506 DOI: 10.1186/s12917-021-02789-x] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Accepted: 02/03/2021] [Indexed: 11/18/2022] Open
Abstract
BACKGROUND Effective animal health surveillance systems require reliable, high-quality, and timely data for decision making. In Tanzania, the animal health surveillance system has been relying on a few data sources, which suffer from delays in reporting, underreporting, and high cost of data collection and transmission. The integration of data from multiple sources can enhance early detection and response to animal diseases and facilitate the early control of outbreaks. This study aimed to identify and assess existing and potential data sources for the animal health surveillance system in Tanzania and how they can be better used for early warning surveillance. The study used a mixed-method design to identify and assess data sources. Data were collected through document reviews, internet search, cross-sectional survey, key informant interviews, site visits, and non-participant observation. The assessment was done using pre-defined criteria. RESULTS A total of 13 data sources were identified and assessed. Most surveillance data came from livestock farmers, slaughter facilities, and livestock markets; while animal dip sites were the least used sources. Commercial farms and veterinary shops, electronic surveillance tools like AfyaData and Event Mobile Application (EMA-i) and information systems such as the Tanzania National Livestock Identification and Traceability System (TANLITS) and Agricultural Routine Data System (ARDS) show potential to generate relevant data for the national animal health surveillance system. The common variables found across most sources were: the name of the place (12/13), animal type/species (12/13), syndromes (10/13) and number of affected animals (8/13). The majority of the sources had good surveillance data contents and were accessible with medium to maximum spatial coverage. However, there was significant variation in terms of data frequency, accuracy and cost. There were limited integration and coordination of data flow from the identified sources with minimum to non-existing automated data entry and transmission. CONCLUSION The study demonstrated how the available data sources have great potential for early warning surveillance in Tanzania. Both existing and potential data sources had complementary strengths and weaknesses; a multi-source surveillance system would be best placed to harness these different strengths.
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Affiliation(s)
- Janeth George
- Department of Veterinary Medicine and Public Health, Sokoine University of Agriculture, P.O. Box 3021, Morogoro, Tanzania.
- SACIDS Foundation for One Health, Sokoine University of Agriculture, P.O. Box 3297, Morogoro, Tanzania.
| | - Barbara Häsler
- Department of Pathobiology and Population Sciences, Veterinary Epidemiology, Economics, and Public Health Group, Royal Veterinary College, Hawkshead Lane, North Mymms, Hatfield, Hertfordshire, AL9 7TA, UK
| | - Erick Komba
- Department of Veterinary Medicine and Public Health, Sokoine University of Agriculture, P.O. Box 3021, Morogoro, Tanzania
| | - Calvin Sindato
- SACIDS Foundation for One Health, Sokoine University of Agriculture, P.O. Box 3297, Morogoro, Tanzania
- National Institute for Medical Research, Tabora Research Centre, Tabora, Tanzania
| | - Mark Rweyemamu
- SACIDS Foundation for One Health, Sokoine University of Agriculture, P.O. Box 3297, Morogoro, Tanzania
| | - James Mlangwa
- Department of Veterinary Medicine and Public Health, Sokoine University of Agriculture, P.O. Box 3021, Morogoro, Tanzania
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Alumasa L, Thomas LF, Amanya F, Njoroge SM, Moriyón I, Makhandia J, Rushton J, Fèvre EM, Falzon LC. Hospital-based evidence on cost-effectiveness of brucellosis diagnostic tests and treatment in Kenyan hospitals. PLoS Negl Trop Dis 2021; 15:e0008977. [PMID: 33411798 PMCID: PMC7833147 DOI: 10.1371/journal.pntd.0008977] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2020] [Revised: 01/25/2021] [Accepted: 11/10/2020] [Indexed: 12/19/2022] Open
Abstract
Hospitals in Kenya continue to use the Febrile Antigen Brucella Agglutination Test (FBAT) to diagnose brucellosis, despite reports showing its inadequacy. This study generated hospital-based evidence on the performance and cost-effectiveness of the FBAT, compared to the Rose Bengal Test (RBT).Twelve hospitals in western Kenya stored patient serum samples that were tested for brucellosis using the FBAT, and these were later re-tested using the RBT. Data on the running time and cost of the FBAT, and the treatment prescribed for brucellosis, were collected. The cost-effectiveness of the two tests, defined as the cost in US Dollars ($) per Disability Adjusted Life Year (DALY) averted, was determined, and a basic sensitivity analysis was run to identify the most influential parameters. Over a 6-month period, 180 patient serum samples that were tested with FBAT at the hospitals were later re-tested with RBT at the field laboratory. Of these 24 (13.3%) and 3 (1.7%) tested positive with FBAT and RBT, respectively. The agreement between the FBAT and RBT was slight (Kappa = 0.12). Treatment prescribed following FBAT positivity varied between hospitals, and only one hospital prescribed a standardized therapy regimen. The mean $/DALY averted when using the FBAT and RBT were $2,065 (95% CI $481-$6,736) and $304 (95% CI $126-$604), respectively. Brucellosis prevalence was the most influential parameter in the cost-effectiveness of both tests. Extrapolation to the national level suggested that an estimated $338,891 (95% CI $47,000-$1,149,000) per year is currently spent unnecessarily treating those falsely testing positive by FBAT. These findings highlight the potential for misdiagnosis using the FBAT. Furthermore, the RBT is cost-effective, and could be considered as the mainstay screening test for human brucellosis in this setting. Lastly, the treatment regimens must be harmonized to ensure the appropriate use of antibiotics for treatment. Brucellosis is the most common bacterial zoonosis globally, with a higher burden in low-resource settings. In humans, the disease manifests itself with non-specific clinical signs, and current international guidelines recommend the use of two serological diagnostic tests to make a confirmatory diagnosis. Many hospitals in Kenya and some neighbouring countries have been using the Febrile Antigen Brucella Agglutination Test (FBAT) for diagnosis, despite reports showing its poor performance. In this study we compared the diagnostic performance and cost-effectiveness of the FBAT with that of the Rose Bengal Test (RBT), a serological assay recommended by international guidelines. Our results showed that, compared to the RBT, the FBAT incorrectly diagnosed a number of patients. This is of concern as it leads to unnecessary antibiotic treatments, increasing the economic burden of the disease and exacerbating the risk of antibiotic resistance. We also highlight the discrepancies in brucellosis treatment regimens currently being prescribed by various hospitals. Finally, we showed that the RBT is a more cost-effective diagnostic test. Our recommendation, therefore, is for the RBT to be considered as the mainstay diagnostic test for human brucellosis in all Kenyan hospitals, and for the harmonization of treatment guidelines.
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Affiliation(s)
- Lorren Alumasa
- International Livestock Research Institute, Nairobi, Kenya
| | - Lian F. Thomas
- International Livestock Research Institute, Nairobi, Kenya
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom
| | | | - Samuel M. Njoroge
- International Livestock Research Institute, Nairobi, Kenya
- Kenya Medical Research Institute, Nairobi, Kenya
| | - Ignacio Moriyón
- Departamento de Microbiología y Parasitología, Facultad de Medicina, and Institute for Tropical Health, Universidad de Navarra, Pamplona, Spain
| | | | - Jonathan Rushton
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom
| | - Eric M. Fèvre
- International Livestock Research Institute, Nairobi, Kenya
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom
- * E-mail: (EMF); (LCF)
| | - Laura C. Falzon
- International Livestock Research Institute, Nairobi, Kenya
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom
- * E-mail: (EMF); (LCF)
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30
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Chiuya T, Masiga DK, Falzon LC, Bastos ADS, Fèvre EM, Villinger J. Tick-borne pathogens, including Crimean-Congo haemorrhagic fever virus, at livestock markets and slaughterhouses in western Kenya. Transbound Emerg Dis 2020; 68:2429-2445. [PMID: 33142046 PMCID: PMC8359211 DOI: 10.1111/tbed.13911] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Revised: 10/26/2020] [Accepted: 10/31/2020] [Indexed: 12/14/2022]
Abstract
Vectors of emerging infectious diseases have expanded their distributional ranges in recent decades due to increased global travel, trade connectivity and climate change. Transboundary range shifts, arising from the continuous movement of humans and livestock across borders, are of particular disease control concern. Several tick-borne diseases are known to circulate between eastern Uganda and the western counties of Kenya, with one fatal case of Crimean-Congo haemorrhagic fever (CCHF) reported in 2000 in western Kenya. Recent reports of CCHF in Uganda have highlighted the risk of cross-border disease translocation and the importance of establishing inter-epidemic, early warning systems to detect possible outbreaks. We therefore carried out surveillance of tick-borne zoonotic pathogens at livestock markets and slaughterhouses in three counties of western Kenya that neighbour Uganda. Ticks and other ectoparasites were collected from livestock and identified using morphological keys. The two most frequently sampled tick species were Rhipicephalus decoloratus (35%) and Amblyomma variegatum (30%); Ctenocephalides felis fleas and Haematopinus suis lice were also present. In total, 486 ticks, lice and fleas were screened for pathogen presence using established molecular workflows incorporating high-resolution melting analysis and identified through sequencing of PCR products. We detected CCHF virus in Rh. decoloratus and Rhipicephalus sp. cattle ticks, and 82 of 96 pools of Am. variegatum were positive for Rickettsia africae. Apicomplexan protozoa and bacteria of veterinary importance, such as Theileria parva, Babesia bigemina and Anaplasma marginale, were primarily detected in rhipicephaline ticks. Our findings show the presence of several pathogens of public health and veterinary importance in ticks from livestock at livestock markets and slaughterhouses in western Kenya. Confirmation of CCHF virus, a Nairovirus that causes haemorrhagic fever with a high case fatality rate in humans, highlights the risk of under-diagnosed zoonotic diseases and calls for continuous surveillance and the development of preventative measures.
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Affiliation(s)
- Tatenda Chiuya
- International Centre of Insect Physiology and Ecology (icipe), Nairobi, Kenya.,Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - Daniel K Masiga
- International Centre of Insect Physiology and Ecology (icipe), Nairobi, Kenya
| | - Laura C Falzon
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Neston, UK.,International Livestock Research Institute, Nairobi, Kenya
| | - Armanda D S Bastos
- Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - Eric M Fèvre
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Neston, UK.,International Livestock Research Institute, Nairobi, Kenya
| | - Jandouwe Villinger
- International Centre of Insect Physiology and Ecology (icipe), Nairobi, Kenya
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Drummond C, Gebhardt ME, Sáenz Robles MT, Carpi G, Hoyer I, Pastusiak A, Reddy MR, Norris DE, Pipas JM, Jackson EK. Stability and detection of nucleic acid from viruses and hosts in controlled mosquito blood feeds. PLoS One 2020; 15:e0231061. [PMID: 32525960 PMCID: PMC7289426 DOI: 10.1371/journal.pone.0231061] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2020] [Accepted: 05/23/2020] [Indexed: 12/29/2022] Open
Abstract
Monitoring the presence and spread of pathogens in the environment is of critical importance. Rapid detection of infectious disease outbreaks and prediction of their spread can facilitate early responses of health agencies and reduce the severity of outbreaks. Current sampling methods are sorely limited by available personnel and throughput. For instance, xenosurveillance utilizes captured arthropod vectors, such as mosquitoes, as sampling tools to access blood from a wide variety of vertebrate hosts. Next generation sequencing (NGS) of nucleic acid from individual blooded mosquitoes can be used to identify mosquito and host species, and microorganisms including pathogens circulating within either host. However, there are practical challenges to collecting and processing mosquitoes for xenosurveillance, such as the rapid metabolization or decay of microorganisms within the mosquito midgut. This particularly affects pathogens that do not replicate in mosquitoes, preventing their detection by NGS or other methods. Accordingly, we performed a series of experiments to establish the windows of detection for DNA or RNA from human blood and/or viruses present in mosquito blood meals. Our results will contribute to the development of xenosurveillance techniques with respect to optimal timing of sample collection and NGS processing and will also aid trap design by demonstrating the stabilizing effect of temperature control on viral genome recovery from blood-fed mosquitoes.
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Affiliation(s)
- Coyne Drummond
- Department of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America
| | - Mary E. Gebhardt
- Department of Molecular Microbiology and Immunology, Johns Hopkins Malaria Research Institute, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America
| | - Maria Teresa Sáenz Robles
- Department of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America
| | - Giovanna Carpi
- Department of Biological Sciences, Purdue University, West Lafayette, Indiana, United States of America
| | - Isaiah Hoyer
- Health Futures, Microsoft Research, Redmond, Washington, United States of America
| | - Andrzej Pastusiak
- Health Futures, Microsoft Research, Redmond, Washington, United States of America
| | - Michael R. Reddy
- Health Futures, Microsoft Research, Redmond, Washington, United States of America
| | - Douglas E. Norris
- Department of Molecular Microbiology and Immunology, Johns Hopkins Malaria Research Institute, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America
| | - James M. Pipas
- Department of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America
| | - Ethan K. Jackson
- Health Futures, Microsoft Research, Redmond, Washington, United States of America
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32
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Kelly TR, Machalaba C, Karesh WB, Crook PZ, Gilardi K, Nziza J, Uhart MM, Robles EA, Saylors K, Joly DO, Monagin C, Mangombo PM, Kingebeni PM, Kazwala R, Wolking D, Smith W, Mazet JAK. Implementing One Health approaches to confront emerging and re-emerging zoonotic disease threats: lessons from PREDICT. ONE HEALTH OUTLOOK 2020; 2:1. [PMID: 33824944 PMCID: PMC7149069 DOI: 10.1186/s42522-019-0007-9] [Citation(s) in RCA: 70] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2019] [Accepted: 12/13/2019] [Indexed: 05/18/2023]
Abstract
Recurring outbreaks of emerging and re-emerging zoonoses, such as Ebola virus disease, avian influenza, and Nipah virus, serve as a reminder that the health of humans, animals, and the environment are interconnected and that early response to emerging zoonotic pathogens requires a coordinated, interdisciplinary, cross-sectoral approach. As our world becomes increasingly connected, emerging diseases pose a greater threat, requiring coordination at local, regional, and global levels. One Health is a multisectoral, transdisciplinary, and collaborative approach promoted to more effectively address these complex health threats. Despite strong advocacy for One Health, challenges for practical implementation remain. Here we discuss the value of the One Health approach for addressing global health challenges. We also share strategies applied to achieve successful outcomes through the USAID Emerging Pandemic Threats Program PREDICT project, which serve as useful case studies for implementing One Health approaches. Lastly, we explore methods for promoting more formal One Health implementation to capitalize on the added value of shared knowledge and leveraged resources.
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Affiliation(s)
- Terra R. Kelly
- One Health Institute, University of California, Davis, CA USA
| | | | | | | | - Kirsten Gilardi
- Gorilla Doctors, Mountain Gorilla Veterinary Project and Karen C. Drayer Wildlife Health Center, University of California, Davis, CA USA
| | - Julius Nziza
- Gorilla Doctors, Mountain Gorilla Veterinary Project and Karen C. Drayer Wildlife Health Center, University of California, Davis, CA USA
| | | | | | | | | | - Corina Monagin
- One Health Institute, University of California, Davis, CA USA
| | | | | | | | - David Wolking
- One Health Institute, University of California, Davis, CA USA
| | - Woutrina Smith
- One Health Institute, University of California, Davis, CA USA
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