Elevated temperature shifts soil N cycling from microbial immobilization to enhanced mineralization, nitrification and denitrification across global terrestrial ecosystems

Glyphosate and urea co-exposure: Impacts on soil nitrogen cycling

Glyphosate, the most widely utilized herbicide, frequently coexists with nitrogen fertilizers such as urea in soil environments. Nitrogen cycling is a key process for maintaining soil ecological functions and nutrient balance. However, the effects of co-exposure to glyphosate and urea on this process have remained unclear. This study investigated the impact of co-exposure to glyphosate (10 mg/kg) and urea (260.87 or 347.83 mg/kg, equivalent to 180 or 240 kg N/ha) on soil nitrogen cycling through a 98-day incubation experiment. Soil nutrients, enzyme activities, bacterial community structure, and functional genes were analyzed. NH4+-N and NO3--N contents significantly decreased by 44.70-53.43 % and 36.74-49.12 %, respectively. Co-exposure reduced bacterial diversity and altered nitrogen cycling genes, decreasing nifH while increasing amoA and nosZ, indicating reduced nitrogen input potential and increased inorganic nitrogen loss. Enzyme analysis confirmed excessive activation of nitrification and denitrification, lowering nitrogen availability. Partial least squares structural equation modeling (PLS-SEM) showed co-exposure indirectly decreased NH4+-N and NO3--N via enhanced nitrate and nitrite reductase activities. The study highlights the complex interactions between herbicides and fertilizers in soil environments and underscores the need for further research to understand the implications for wider soil health and crop production in agriculture systems.

Sand barriers promote the accumulation of soil nutrients in sandy areas under different ecological conditions: A meta-analysis

Sand barriers have been widely employed in projects aimed at stabilizing moving sand. Their construction directly influences the comprehensive dynamics of wind speed and sediment deposition. However, there is limited understanding of the magnitude of soil nutrients responses to sand barriers and the effects of various driving factors. This study collected data from 43 studies, encompassing 951 observations. Using meta-analysis, we investigated the effects of sand barriers on soil nutrients and analyzed the regulatory effects of ecological factors and sand barrier properties on soil nutrients. The results show that sand barriers significantly increased the accumulation of soil organic carbon (p < 0.01), total nitrogen (p < 0.01), available nitrogen (p < 0.01), total phosphorus (p < 0.01), and available phosphorus (p < 0.01). Among them, the regulation effect on total nitrogen was the most notable, with 67 % increase. Moreover, combined sand barriers integrating mechanical and vegetative measures better promoted soil nutrients, particularly in enhancing soil phosphorus, with total phosphorus increasing by 36 % and available phosphorus increasing by 52 %. These results suggested that combining these measures can maximize the protective effectiveness. Furthermore, under conditions of water scarcity, ecological factors exerted a more significant effect on regulating soil nutrients than sand barrier properties. The mean annual precipitation (MAP) is the most critical factor among considered ecological indicators - soil sampling depth, altitude, the mean annual wind speed, MAP, the mean annual temperature, and the mean annual evaporation. Taken together, these results suggested that sand barriers installation has a positive effect on soil nutrient accumulation in sandy areas, providing scientific support for desertification control and sustainable land management.

Combined effects of acidification and warming on soil denitrification and microbial community

In light of the challenges posed by contemporary global warming and soil acidification, the respective effects of pH and temperature on soil microbiome and functions have been explored. However, the combined influence of acidification and warming on soil denitrification and active microbial communities are still unclear. Here, we conducted a microcosm experiment to investigate the influences of increasing temperature and acidification on active microbes such as bacteria and eukaryotic microbes. Denitrification rate in soil were detected using a C2H2 inhibition method. The results showed that the Shannon index of bacterial communities exhibited significant enhancement in response to warming and acidification, whereas their community patterns were predominantly shaped by pH. For the micro-eukaryotic community, temperature emerged as the main driver of variations in the α-diversity, with the MT group exhibiting significantly lower Shannon indices compared to LT and HT groups. Both pH and temperature exerted a combined effect on their community patterns. Additionally, pH was detected as a crucial factor influencing denitrification rates, with a significant negative correlation between pH and denitrification rate within the pH range of 4.32-7.46 across all temperatures in this study. Our findings highlighted the significant impacts of acidification on soil denitrification rates and active microbes under global warming, which provided an important scientific basis for agricultural production management and environmental protection in the context of global climate warming.

Carbon sequestration potential of wetlands and regulating strategies response to climate change

Wetlands are important carbon sinks for mitigating climate warming. In this paper, greenhouse gas (GHG) fluxes and carbon sequestration capacity of freshwater wetlands, coastal wetlands and constructed wetlands around the world are evaluated, and strategies to improve carbon sequestration by wetlands are proposed based on the main influencing factors. Air temperature and average annual rainfall are significantly positively correlated with CH4 flux and N2O flux in freshwater wetlands and coastal wetlands. While chemical oxygen demand (COD) and total nitrogen (TN) concentrations of influent are found to be the main factors affecting GHG fluxes in constructed wetlands. The main factors affecting wetland carbon storage include the presence and species of wetland vegetation, ecological water level, and ecological pattern. Strategies for protecting and restoring existing wetlands, creating new wetlands, and strengthening the carbon sequestration capacity of wetlands are proposed. Fully realizing the carbon sequestration potential of wetlands holds the prospect of a more effective and sustainable response to global climate change.

Reactive nitrogen emissions from cropland and their dominant driving factors in China

The environmental impacts of reactive nitrogen (Nr) emitted from fertilized cropland present significant challenges for balancing food security, air pollution and climate change mitigation. As a leading agricultural producer, China requires high-resolution Nr emissions modeling within a comprehensive processed-based framework to address these issues effectively. In this study, we applied a process-based agroecological model (FEST-C*) to estimate daily Nr emissions at 0.25° in China during 2020 and analyzed the driving factors by using Structural Equation Modeling, Random Forest, and Dominance Analysis. The hotspots of annual Nr emissions were in North China, Southeast China, and Southwest China, collectively responsible for over 80 % of the total emissions. Approximately 81 % of the total Nr emissions were from wheat, maize, and rice fields. Timing and amount of basal and topdressing fertilization under different crop rotation systems determined the monthly and seasonal variations of Nr emissions. The impacts of various factors on Nr emissions varied with NH3 being mainly driven by fertilizer consumption and other Nr species (N2O, NO, and HONO) also affected by soil temperature and water content. The spatial distributions of monthly Nr emissions calculated by FEST-C* were more realistic than currently available emission inventories compared to satellite or field observations. These findings will enable policymakers to develop effective control measures that alleviate cropland Nr emissions while sustaining crop production in China.

Pyraclostrobin repeated treatment altered the degradation behavior in soil and negatively affected soil bacterial communities and functions

This study investigated the degradation dynamics of the fungicide pyraclostrobin in three apple orchard soils, along with the responses of soil bacterial community compositions, functions, co-occurrence patterns, and soil nitrogen cycling, under repeated treatment strategies in laboratory conditions. The degradation half-lives of pyraclostrobin varied across the soil types, ranging from 15.7 to 43.4 days, in the following order: Anyang soil > Qingdao soil > Yangling soil. Repeated pyraclostrobin treatment affected degradation behaviors across the different soils. Pyraclostrobin significantly inhibited soil microbial activity and reduced soil bacterial diversity, with more pronounced negative effects observed at high-concentration treatment. Pyraclostrobin clearly changed soil bacterial community structures, significantly enriching potentially degradative bacterial genera such as Methylibium and Nocardioides, which showed increases in the relative abundances of 3.0-181.8 % compared with control. Additionally, pyraclostrobin reduced the complexity of soil bacterial networks and modified the diversity of functional modules. Notably, repeated treatment severely disrupted soil nitrogen cycling, with the absolute abundances of amoA, amoB, nifH, nirK, and nirS in high-concentration treatment decreasing by up to 19.4-91.8 % compared with control. Collectively, pyraclostrobin repeated application altered the degradation behavior, inhibited soil microbial activities, modified soil bacterial community structures and co-occurrence patterns, and seriously disrupted soil nitrogen cycling.

Microbial mechanisms of interactive climate-driven changes in soil N2O and CH4 fluxes: A global meta-analysis

Soils represent both a source of and sink for greenhouse gases (GHG). Elevated temperature (eT) affects both the physical and biological factors that drive GHG emissions from soil and thus understanding the effects of rising global temperatures on terrestrial GHG emission is needed to predict future GHG emissions, and to identify mitigation strategies. However, uncertainty remains about the interactive effects of multiple climate factors across different ecosystems, complicating our ability to develop robust climate change projections. Therefore, a global meta-analysis of 1337 pairwise observations from 150 peer-reviewed publications (1990-2023) was conducted to assess the individual effect of eT and its combined effects with eCO2 (eT + eCO2), drought (eT + drought) and increased precipitation (eT + ePPT) on soil N2O and CH4 fluxes, microbial functional genes, and soil extracellular enzyme activities across grassland, cropland, and forestland ecosystems. Across the dataset, eT significantly increased N2O emissions (21%) and CH4 uptake (36%). Nitrogen cycling was consistently stimulated by eT, with NO3- and NH4+ and the abundance of amoA-AOB gene increasing by 6%, 10%, and 18%, respectively. Soil water content (SWC) was reduced, whereas increases of 9% in soil organic carbon (SOC), 14% in microbial biomass carbon (MBC), and 10% in total plant biomass were found under eT. The stimulation of soil N2O emissions by eT was maintained for all ecosystems when combined with other global change factors (ie., eT + eCO2, eT + ePPT, and eT + drought). By contrast, effects of eT on CH4 uptake and emissions were more variable when combined with other factors; for instance, eT + eCO2 and eT + ePPT suppressed CH4 uptake in grasslands. This study highlights the urgent need to study the microbial mechanisms responsible for combined global change effects on N2O and especially CH4 fluxes.

Assessment of temperature dynamics during methane oxidation in a pilot scale compost biofilter

Biological methane oxidation can sustain high temperatures in organic matrices, such as landfill covers and compost biofilters. This study investigates the temperature dynamics, methane removal efficiency, and microbial community responses in a pilot scale compost biofilter under three methane concentrations (2, 4, and 8 % v v-1 in air) with a 23-minute empty bed residence time. Complete methane removal was achieved at 2 %, with compost bed temperatures reaching 51 °C. At 4 % and 8 %, temperatures exceeded 60 °C, reducing methane removal efficiency to 97 % and 75 %, respectively, with maximum removal rates of 75 g m-3h-1. Thermotolerant Methylocaldum dominated at temperatures above 50 °C. Elevated temperatures shifted microbial metabolism from anabolism toward catabolism, likely due to thermal stress, as indicated by outlet gas profiles. These findings highlight the importance of optimizing operating conditions, such as moisture control and heat extraction, to balance thermal performance and microbial activity for effective methane biofiltration.

Minor Effects of Warming on Soil Microbial Diversity, Richness and Community Structure

Climate warming has caused widespread global concern. However, how warming affects soil microbial diversity, richness, and community structure on a global scale remains poorly understood. Here we conduct a meta-analysis of 945 observations from 100 publications by collecting relevant data. The results show that field warming experiments significantly modify soil temperature (+1.8°C), soil water content (-3.2%), and soil pH (-0.04). However, field warming does not significantly alter the diversity, richness, and community structure of soil bacteria and fungi. Warming-induced changes in soil variables (i.e., ΔSoil water content, ΔpH), ΔTemperature and experimental duration are important factors influencing the microbial responses to warming. In addition, soil bacterial α-diversity (Shannon index) decreases significantly (-3.4%) when the warming duration is 3-6 years, and bacterial β-diversity increases significantly (35.2%) when warming exceeds 6 years. Meta-regression analysis reveals a positive correlation between the change of bacterial Shannon index and ΔpH. Moreover, warming produces more pronounced effects on fungal Shannon index and β-diversity in experimental sites with moderate mean annual temperature (MAT, 0°C-10°C) than in higher (> 10°C) or lower (< 0°C) MAT. Overall, this study provides a global perspective on the response of soil microorganisms to climate warming and improves our knowledge of the factors influencing the response of soil microorganisms to warming.

Adaptive Mitigation of Warming-Induced Food Crisis and Nitrogen Pollution

Feeding the world's population in the face of global warming is a challenging task. Warming poses a dual threat to both global food security and nitrogen pollution in croplands. However, a consensus remains elusive regarding the precise impact of warming on the nitrogen cycle in global croplands. Our study revealed that warming alone could reduce grain yields by 21% (with a 95% confidence interval of 15-27%) while increasing nitrogen losses to the environment by 54-169%. Under the 2050 warming scenario, the annual global nitrogen harvest is projected to decrease by 16 million tonnes (Tg), accompanied by an increase in nitrogen surplus (nitrogen lost to the environment) of 29 Tg relative to the baseline. Implementation of timely and robust adaptive mitigation strategies, including optimization of planting dates, cultivars, irrigation, and fertilization practices, could mitigate the warming-induced food crisis and nitrogen pollution, averting potential losses of US$ 530 billion at an estimated cost of US$ 73 billion.

Warming Promotes Nitrogen and Carbon Cycles in Global Grassland

Grasslands, standing as one of Earth's major ecosystems, offer numerous services vital to human well-being. The productivity of grasslands hinges on the availability of soil reactive nitrogen, which is highly sensitive to climatic variations. Using an extensive synthesis of 1242 experimental observations, reinforced by multiple models, we show that warming as a single driver of climate change intensifies nitrogen dynamics in grasslands. This could lead to increases in net primary productivity of 1% to 9% and escalate nitrogen leakage into the environment by 22% to 141%. Under the warming SSP2-4.5 scenario, we foresee an annual boost of 17 million tons per year (Tg yr-1) of nitrogen inputs, predominantly via biological nitrogen fixation, compared to the baseline scenario by 2050. Total nitrogen harvest is projected to climb by 12 Tg yr-1. However, the nitrogen surplus surge is expected to increase by 5 Tg yr-1, potentially intensifying nitrogen pollution. To counter this, adaptation measures must aim at curtailing reactive nitrogen losses while preserving increased nitrogen harvest. This could reduce nitrogen input and surplus by 10 and 20 Tg yr-1, respectively, while boosting nitrogen harvest by 10 Tg yr-1, potentially yielding economic gains of up to 121 billion USD by 2050. In shaping climate change adaptation policies, it is critical to balance the potential benefits and drawbacks of forging effective management approaches.

Edaphic factors mediate the response of nitrogen cycling and related enzymatic activities and functional genes to heavy metals: A review

Soil nitrogen (N) transformations control N availability and plant production and pose environmental concerns when N is lost, raising issues such as soil acidification, water contamination, and climate change. Former studies suggested that soil N cycling is chiefly regulated by microbial activity; however, emerging evidence indicates that this regulation is disrupted by heavy metal (HM) contamination, which alters microbial communities and enzyme functions critical to N transformations. Environmental factors like soil organic carbon, soil texture, water content, temperature, soil pH, N fertilization, and redox status play significant roles in modulating the response of soil N cycling to HM contamination. This review examines how different HMs affect soil N processes, including N fixation, mineralization, nitrification, denitrification, dissimilatory nitrate reduction to ammonium (DNRA), and immobilization, as well as microbial activities and functional genes related to soil N transformations. The review additionally outlines the impact of HMs on environmental degradation, including the risk of soil N losses (e.g., leaching, runoff, and gaseous emissions) and depletion of soil fertility, thus threatening the sustainability of the ecosystem. The effect of edaphic factors and fertilization on soil N cycling response to HM contamination was also examined. The effect of phytoremediation, a sustainable approach to remediate HM polluted soils, on N cycling was also reviewed. Thus, this review underscores the importance of increasing research and innovative strategies to combat HM pollution's effects to enhance soil health, boost crop yields, and protect soil stability and productivity.

Influence of Arbuscular Mycorrhizal Fungi on Nitrogen Dynamics During Cinnamomum camphora Litter Decomposition

Arbuscular mycorrhizal fungi (AMF) can preferentially absorb the released ammonium (NH4+) over nitrate (NO3-) during litter decomposition. However, the impact of AMF's absorption of NH4+ on litter nitrogen (N) decomposition is still unclear. In this study, we investigated the effects of AMF uptake for NH4+ on litter N metabolic characteristics by enriching NH4+ via AMF suppression and nitrification inhibition in a subtropical Cinnamomum camphora forest. The results showed that AMF suppression and nitrification inhibition significantly decelerated litter decomposition in the early stage due to the repression of NH4+ in extracellular enzyme activity. In the late stage, when soil NH4+ content was low, in contrast, they promoted litter decomposition by increasing the extracellular enzyme activities. Nitrification inhibition mainly promoted the utilization of plant-derived N by promoting the degradation of the amide I, amide II, and III bands by increasing protease activity, and it promoted ammonification by increasing urease activities, whereas it reduced the utilization of microbial-derived N by decreasing chitinase activity. On the contrary, AMF suppression, which significantly reduced the ammonification rate and increased the nitrification rate, only facilitated the degradation of the amide II band. Moreover, it intensified the microbial-derived N decomposition by increasing chitinase activity. The degradation of the amide I and II bands still relied on the priming effects of AMF on soil saprotrophs. This was likely driven by AMF-mediated phosphorus (P) mineralization. Nutrient acquiring, especially P by phosphatase, were the main factors in predicting litter decomposition and protein degradation. Thus, AMF could relieve the end-product repression of locally enriched NH4+ in extracellular enzyme activity and promote early-stage litter decomposition. However, the promotive effects of AMF on litter protein degradation and NH4+ release rely on P mineralization. Our results demonstrated that AMF could alleviate the N limitation for net primary production via accelerating litter N decomposition and reducing N loss. Moreover, they could restrict the decomposition of recalcitrant components by competing with saprotrophs for nutrients. Both pathways will contribute to C sequestration in forest ecosystems, which advances our understanding of AMF's contribution to nutrient cycling and ecosystem processes in subtropical forests.

Environmental Conditions Modulate Warming Effects on Plant Litter Decomposition Globally

Empirical studies worldwide show that warming has variable effects on plant litter decomposition, leaving the overall impact of climate change on decomposition uncertain. We conducted a meta-analysis of 109 experimental warming studies across seven continents, using natural and standardised plant material, to assess the overarching effect of warming on litter decomposition and identify potential moderating factors. We determined that at least 5.2° of warming is required for a significant increase in decomposition. Overall, warming did not have a significant effect on decomposition at a global scale. However, we found that warming reduced decomposition in warmer, low-moisture areas, while it slightly increased decomposition in colder regions, although this increase was not significant. This is particularly relevant given the past decade's global warming trend at higher latitudes where a large proportion of terrestrial carbon is stored. Future changes in vegetation towards plants with lower litter quality, which we show were likely to be more sensitive to warming, could increase carbon release and reduce the amount of organic matter building up in the soil. Our findings highlight how the interplay between warming, environmental conditions, and litter characteristics improves predictions of warming's impact on ecosystem processes, emphasising the importance of considering context-specific factors.

Changing climate intensifies downstream eutrophication by enhancing nitrogen availability from tropical forests

The contribution of diffuse nutrient exports from forests to downstream water bodies is significant owing to their extensive spatial distribution across watersheds. However, the intricacies of coupling mechanism between diffuse nutrient exports and meteorological factors driving downstream eutrophication remain poorly understood. Multiple methods involving field sampling, laboratory analysis, and model simulation were utilized to investigate the impact of diffuse nutrient exports from tropical forests on chlorophyll a concentration dynamic in the downstream reservoir. A strong positive correlation was observed between air temperature and chlorophyll a concentration, indicating the direct influence of climatic factors on microalgal biomass. The significant positive linear relationship was also observed between diffuse nitrate exports and chlorophyll a concentration, with a regression coefficient of 0.36 (P < 0.001), underscoring the role of nitrogen inputs in stimulating microalgal growth. The interplay between diffuse nitrate exports and meteorological factors was shown to regulate chlorophyll a concentration fluctuation. Additionally, the structural equation model revealed that increasing temperature and decreasing precipitation could elevate chlorophyll a concentration by enhancing nitrogen availability. Monte Carlo simulation results further revealed that temperature and precipitation were the most influential factors affecting chlorophyll a concentration during dry and rainy seasons, with sensitivity values of 0.94 and - 0.76, respectively. Notably, the eutrophication status was projected to deteriorate from light to moderate under diminishing precipitation conditions. These findings underscore the urgency of addressing eutrophication risks in reservoirs surrounded by tropical forests and the implementation of effective nitrate mitigation strategies is imperative, which offers theoretical guidance for the management of eutrophic water restoration within tropical rainforest regions under changing climate conditions.

Divergent apparent temperature sensitivity of forest-floor respiration across a managed boreal forest landscape

Understanding the apparent temperature sensitivity (Q10) of forest floor respiration (Q10Rff) and its plant autotrophic (Q10Ra) and soil heterotrophic (Q10Rh) components is critical for determining the strength and direction of forest carbon cycle-climate feedbacks. However, the spatial variability of Q10Rff and its controlling factors across the spatially heterogeneous boreal forest landscape remains poorly understood. In this study, we used chamber-based respiration measurements conducted on paired natural and trenching plots over three growing seasons (2016-2018) to determine Q10Rff, Q10Rh and Q10Ra to soil temperature across 50 diverse forest stands (ranging 5-211 years old) in a managed landscape in northern Sweden. Additionally, we estimated ecosystem- and landscape-scale Q10 based on conventional and tall tower eddy covariance measurements, respectively, conducted over the same landscape. Our results suggest manifold variations (i.e., 10th to 90th percentiles) of Q10Rff (1.7 to 6.6), with Q10Ra (0.9 to 7.4) showing a greater range than Q10Rh (1.6 to 5.3). Forest-floor understory biomass was the main control of variations in Q10Ra, whereas soil properties explained best those of Q10Rh. Furthermore, a seasonal hysteresis of Q10Rff was observed, with higher values mostly occurring during the late growing season. The magnitude of this hysteresis scaled with stand age in response to concurrent changes in net primary production. The Q10Rff to air temperature declined with increasing stand age, which was attributed to the increased decoupling of air and soil temperatures with canopy development. Despite the considerable stand-level variations, when averaged over the 50 forest stands, Q10Rff to air temperature converged with that of both ecosystem- and landscape-scale respiration. In conclusion, our study highlights the complexity of Q10Rff, which needs to be considered in predictions of the interactions of climate change and management with the carbon cycle of managed boreal forests.

Increased global warming potential during freeze-thaw cycle is primarily due to the contribution of N2O rather than CO2

While freeze-thaw cycle (FTC) can influence greenhouse gas emissions, the specific greenhouse gas that responds most strongly to FTC, as well as the underlying mechanisms, remain unclear. Here, we conducted a meta-analysis to explore the responses of global warming potential (GWP) and the fluxes of CO2 and N2O to FTC. Our results showed that FTC treatment significantly increased GWP, N2O flux, cumulative GWP, and cumulative N2O emissions by 23.1 %, 53.2 %, 14.5 %, and 164.6 %, respectively, but did not affect CO2 flux, indicating that the enhanced GWP during the FTC period may be primarily due to the contribution of N2O flux rather than CO2 flux. The responses of GWP (+68.6 %), CO2 (+21.0 %), and N2O fluxes (+136.3 %) in croplands was higher than those in other ecosystems, exhibiting a strong dependence on ecosystem types. The effect size of FTC treatment on greenhouse gas emissions escalated with decreasing freezing temperature and diminished with increasing FTC frequency. Moreover, mean annual temperature (MAT) and FTC patterns were key factors influencing GWP during the FTC period. These findings provide critical insights into the variations in greenhouse gas emissions due to FTC and its influencing factors, allowing for more accurate predictions of the future impact of global climate change on GWP.

Organic fertilizer significantly mitigates N2O emissions while increase contributed of comammox Nitrospira in paddy soils

Nitrification is the dominant process for nitrous oxide (N2O) production under aerobic conditions, but the relative contribution of the autotrophic nitrifiers (the ammonia-oxidising archaea (AOA), the ammonia-oxidising bacteria (AOB) and the comammox) to this process is still unclear in some soil types. This is particularly the case in paddy soils under different fertilization regimes. We investigated active nitrifiers and their contribution to nitrification and N2O production in a range of unfertilized and fertilized paddy soils, using 13CO2-DNA based stable isotope probing (SIP) technique combined with a series of specific nitrification inhibitors, including acetylene (C2H2), 3, 4-dimethylpyrazole phosphate (DMPP) and 2-phenyl-4,4,5,5-tetramethylimidazoline-1-oxyl 3-oxide (PTIO). The soils had a long-term history of fertilizer application, including chemical fertilizer only, a mixture of chemical fertilizers (70 %) and chicken manure (30 %) or a mixture of rice straw and chemical fertilizers. 13CO2-DNA-SIP and Illumina MiSeq sequencing demonstrated that comammox clades A.1 and B were active nitrifiers in all fertilized paddy soils. Inhibitor experiment showed that AOB largely contributed to nitrification activity and N2O emission in all paddy soils, while comammox contribution was more significant than AOA. Fertilization considerably altered nitrifiers' relative contribution to nitrification activity and N2O emissions. Applying organic fertilizers significantly decreased the N2O emissions but increased the contribution of comammox to the process. These findings expand the functional ecological niche of comammox, revealing their nitrification role and N2O production in other ecosystems than oligotrophic habitats.

Nitrous oxide emissions and soil profile responses to manure substitution in the North China Plain drylands

Substituting synthetic fertilizers with manures in agriculture enhances soil properties and crop yield. However, the impact on nitrous oxide (N2O) emissions, especially from the soil profile, remains poorly understood. This study examined emissions from 2017 to 2019 on a well-established (>10-year) maize field site in the North China Plain. Three treatments were compared: 100 % synthetic nitrogen (NPK), 50 % synthetic fertilizer N + 50 % manure N substitution (50%MNS), and 100 % manure N substitution (100%MNS). N2O emissions were monitored for three years, and in 2019, N2O concentrations at 20 cm and 40 cm soil depths were analyzed in relation to surface N2O fluxes and environmental factors. The results showed manure substitution resulted in about 13.8 %-25.2 % (50%MNS) and 40.3 %-72.2 % (100%MNS) reduction in N2O emissions over the 3-year period compared with the NPK treatment. Throughout the maize growing season, the top-dressing accompanied by rainfall was responsible for the N2O emissions. The difference in N2O concentrations between all the treatments at 20 cm depth was insignificant, but at 40 cm depth the N2O concentrations were significantly higher for the 50%MNS treatment than the other treatments. The N2O fluxes and N2O concentration were not synchronized especially in NPK. The decoupled relationship between the N2O fluxes and the N2O concentration in the soil profile depth suggested the contribution of N2O produced in the soil profile to the surface N2O fluxes is limited. This study highlights that manure substitution is an efficient measure to reduce N2O emissions.

Soil moisture-dependent tire wear particles aging processes shift soil microbial communities and elevated nitrous oxide emission on drylands

Tire wear particles (TWPs) have been an emerging threat to the soil ecosystem, while impact of the TWPs aging on soil microbial communities remains poorly understood. This study investigated the dynamic responses of soil microbial communities to the TWPs aging under both wet and flooded conditions. We found that different soil moisture conditions resulted in distinct microbial community structures. Soil bacteria were more sensitive to wet conditions, while soil fungi were more sensitive to flooded conditions. The family Symbiobacteraceae was predominant in the TWP-sphere under both wet and flooded conditions after 60 days, followed by Brevibacillaceae. Notably, we observed that TWPs input significantly increased nitrous oxide (N2O) emission from dryland soil. Several taxa including Cyanobacteriales, Blastocatellaceae and Pyrinomonadaceae were identified as TWP-biomarkers in soils and potentially played significant roles in N2O emissions from drylands. Their responses to the TWPs input correlated closely with changes in the relative abundance of genes involved in ammonia oxidation (amoA/B), nitrite reduction (nirS/K) and N2O reduction (nosZ) in drylands. Our results demonstrate that soil moisture-dependent TWP aging influences N2O emission by altering both the associated microbial communities and the relevant genes.

Modeling soil acidity (pH) dynamics under extreme agroclimatic conditions in Horro Guduru Wallaga Zone, northwestern Ethiopia

Soil plays a critical role in nutrient availability, microbial activity, and fertility in agriculture. However, the effects of agroclimatic conditions on soil pH are not well understood, particularly in the Horro Guduru Zone of Ethiopia. This study aimed to investigate the soil pH under extremely wet and dry conditions across 3 shared socioeconomic pathway (SSP) scenarios: SSP1-2.6, SSP2-4.5, and SSP5-8.5. Baseline agroclimatic data (1981-2010) and future projections (2041-2070) were obtained from the European Commission Climate Change Services. Soil pH data at a 250 m resolution were extracted from the FAO-UNESCO global soil map. Missing values, multicollinearity, and outliers were addressed before modeling. Predictive models, including neural networks, generalized regression, and bootstrap forests, were validated, with the generalized regression model showing the best performance. The results indicate that soil pH decreases under consecutive dry‒wet conditions and increases with increasing maximum day temperatures across all scenarios. Soil pH is significantly influenced by the number of consecutive dry days, consecutive wet days, and maximum day temperature. The SSP1-2.6 and SSP2-4.5 scenarios resulted in improved pH levels, whereas SSP5-8.5 led to a decrease in soil pH, averaging 5.79 and decreasing to 5.54. These findings suggest that under SSP5-8.5, soil health and farming productivity may be compromised. This study emphasizes the need to adjust soil management practices based on prevailing climatic conditions to ensure soil health and agricultural sustainability.

Changes in the Yield Effect of the Preceding Crop in the US Corn Belt Under a Warming Climate

Crop rotation has been widely used to enhance crop yields and mitigate adverse climate impacts. The existing research predominantly focuses on the impacts of crop rotation under growing season (GS) climates, neglecting the influences of non-GS (NGS) climates on agroecosystems. This oversight limits our understanding of the comprehensive climatic impacts on crop rotation and, consequently, our ability to devise effective adaptation strategies in response to climate warming. In this study, we examine the impacts of both GS and NGS climate conditions on the yield effect of the preceding crop in corn-soybean rotation systems from 1999 to 2018 in the US Midwest. Using causal forest analysis, we estimate that crop rotation increases corn and soybean yields by 0.96 and 0.22 t/ha on average, respectively. We then employ statistical models to indicate that increasing temperatures and rainfall in the NGS reduce corn rotation benefits, while warming GS enhances rotation benefits for soybeans. By 2051-2070, we project that warming climates will reduce corn rotation benefits by 6.74% under Shared Socioeconomic Pathway (SSP) 1-2.6 and 17.18% under SSP 5-8.5. For soybeans, warming climates are expected to increase rotation benefits by 8.36% under SSP 1-2.6 and 13.83% under SSP 5-8.5. Despite these diverse climate impacts on both crops, increasing crop rotation could still improve county-average yields, as neither corn nor soybean was fully rotated. If we project that all continuous corn and continuous soybeans are rotated by 2051-2070, county-average corn yields will increase by 0.265 t/ha under SSP 1-2.6 and 0.164 t/ha under SSP 5-8.5, while county-average soybean yields will gain 0.064 t/ha under SSP 1-2.6 and 0.076 t/ha under SSP 5-8.5. These findings highlight the effectiveness of crop rotation in the face of warming NGS and GS in the future and can help evaluate opportunities for adaptation.

Warming and rainfall reduction alter soil microbial diversity and co-occurrence networks and enhance pathogenic fungi in dryland soils

In this 9-year manipulative field experiment, we examined the impacts of experimental warming (2 °C, W), rainfall reduction (30 % decrease in annual rainfall, RR), and their combination (W + RR) on soil microbial communities and native vegetation in a semi-arid shrubland in south-eastern Spain. Warming had strong negative effects on plant performance across five coexisting native shrub species, consistently reducing their aboveground biomass growth and long-term survival. The impacts of rainfall reduction on plant growth and survival were species-specific and more variable. Warming strongly altered the soil microbial community alpha-diversity and changed the co-occurrence network structure. The relative abundance of symbiotic arbuscular mycorrhizal fungi (AMF) increased under W and W + RR, which could help buffer the direct negative impacts of climate change on their host plants nutrition and enhance their resistance to heat and drought stress. Indicator microbial taxa analyses evidenced that the marked sequence abundance of many plant pathogenic fungi, such as Phaeoacremonium, Cyberlindnera, Acremonium, Occultifur, Neodevriesia and Stagonosporopsis, increased significantly in the W and W + RR treatments. Moreover, the relative abundance of fungal animal pathogens and mycoparasites in soil also increased significantly under climate warming. Our findings indicate that warmer and drier conditions sustained over several years can alter the soil microbial community structure, composition, and network topology. The projected warmer and drier climate favours pathogenic fungi, which could offset the benefits of increased AMF abundance under warming and further aggravate the severe detrimental impacts of increased abiotic stress on native vegetation performance and ecosystem services in drylands.

Greater influences of nitrogen addition on priming effect in forest subsoil than topsoil regardless of incubation warming

Subsoil (below 20 cm), storing over 50 % of soil organics carbon (SOC) within the 1 m depth, plays a critical role in regulating climate and ecosystem function. However, little was known on the changes in SOC decomposition induced by exogenous C input (i.e., priming effect) across the whole soil profile under nitrogen (N) enrichment and climate warming. We designed an incubation system of soil columns with minor physical disturbance, which allows the manual additions of exogenous C and N and incubation under ambient or elevated temperature. A negative priming effect by glucose was observed in all layers of ambient soil, while the negative priming effect was enhanced by soil depth but inhibited by warming. Nitrogen addition shifted the priming effect from negative to positive under ambient temperature, and decreased the magnitude of negative priming effect under elevated temperature. Nitrogen uplift effect on priming effect was more pronounced in subsoil compared to topsoil, while this effect diminished with rising temperature. Soil microbial activity (e.g., the CO2 production within 3 days) and acid phosphatase activity had important roles in regulating the variations in priming effect across the soil profile. Our results indicated that increase in labile substrate (e.g., exogenous C input) input would not lead to native SOC destabilization in subsoil, N addition shifted the priming effect from negative to positive, increasing the SOC decomposition under ambient temperature, while labile C input together with N addition benefited SOC sequestration by inducing negative priming effects in forest soil under warming climate.

Conservation agriculture improves soil health and sustains crop yields after long-term warming

Climate warming threatens global food security by exacerbating pressures on degraded soils under intensive crop production. Conservation agriculture is promoted as a sustainable solution that improves soil health and sustains crop yields in a changing climate, but these benefits may be affected by long-term warming. Here, we investigate the effects of conservation agriculture compared to conventional agriculture on 17 soil properties, microbial diversity and crop yields, during eight-years' experimental warming. An overall positive effect of warming on soil health over time under conservation agriculture is characterized by linear increases in soil organic carbon and microbial biomass carbon. Warming-triggered shifts in microbial biomass carbon and fungal diversity (saprogen richness) are directly linked to a 9.3% increase in wheat yields over eight years, but only under conservation agriculture. Overall, conservation agriculture results in an average 21% increase in soil health and supports similar levels of crop production after long-term warming compared to conventional agriculture. Our work provides insights into the potential benefits of conservation agriculture for long-term sustainable food production because improved soil health improves resilience to the effects of climate warming.

Spatial distribution patterns and drivers of above- and below- biomass in Chinese terrestrial ecosystems

Unraveling the dynamics of the global carbon cycle and assessing the sustainability of terrestrial ecosystems are critically dependent on a comprehensive understanding of vegetation biomass. This exploration delves into the pivotal role of biomass within vegetation communities, emphasizing its impact on ecosystem health, productivity, and community structure development. These insights are invaluable for advancing ecological science and conservation efforts. The synthesis of aboveground (AGB) and belowground (BGB) biomass data from 4485 and 3442 locations across China, respectively, collates a wide range of published sources. Integrating this extensive dataset with environmental parameters and applying advanced machine learning techniques facilitated an in-depth analysis of AGB and BGB spatial patterns within China. Techniques such as variance decomposition analysis and piecewise structural equation modeling were employed to dissect the factors contributing to the spatial variability of vegetation biomass. Significant spatial heterogeneity in biomass distribution was uncovered, with vegetation biomass in the northwest markedly lower than in the southern and northeastern regions. It was observed that AGB consistently surpassed BGB. Climatic conditions, soil characteristics, and soil nutrients were found to significantly explain 53 % and 48 % of the total variance in AGB and BGB, respectively. Specifically, solar radiation and soil total nitrogen were identified as critical factors influencing variations in AGB and BGB. The findings offer profound contributions to the understanding of the global carbon balance and the evaluation of terrestrial ecosystems sustainability. Moreover, they provide essential insights into the ecosystems' response mechanisms to global changes, serving as a fundamental reference for future studies on terrestrial ecosystem carbon cycling and carbon sequestration potentials.

The role of halophyte-induced saline fertile islands in soil microbial biogeochemical cycling across arid ecosystems

Halophyte shrubs, prevalent in arid regions globally, create saline fertile islands under their canopy. This study investigates the soil microbial communities and their energy utilization strategies associated with tamarisk shrubs in arid ecosystems. Shotgun sequencing revealed that high salinity in tamarisk islands reduces functional gene alpha-diversity and relative abundance compared to bare soils. However, organic matter accumulation within islands fosters key halophilic archaea taxa such as Halalkalicoccus, Halogeometricum, and Natronorubrum, linked to processes like organic carbon oxidation, nitrous oxide reduction, and sulfur oxidation, potentially strengthening the coupling of nutrient cycles. In contrast, bare soils harbor salt-tolerant microbes with genes for autotrophic energy acquisition, including carbon fixation, H2 or CH4 consumption, and anammox. Additionally, isotope analysis shows higher microbial carbon use efficiency, N mineralization, and denitrification activity in tamarisk islands. Our findings demonstrate that halophyte shrubs serve as hotspots for halophilic microbes, enhancing microbial nutrient transformation in saline soils.

Diversity of Microbial Functional Genes Promotes Soil Nitrogen Mineralization in Boreal Forests

Soil nitrogen (N) mineralization typically governs the availability and movement of soil N. Understanding how factors, especially functional genes, affect N transformations is essential for the protection and restoration of forest ecosystems. To uncover the underlying mechanisms driving soil N mineralization, this study investigated the effects of edaphic environments, substrates, and soil microbial assemblages on net soil N mineralization in boreal forests. Field studies were conducted in five representative forests: Larix principis-rupprechtii forest (LF), Betula platyphylla forest (BF), mixed forest of Larix principis-rupprechtii and Betula platyphylla (MF), Picea asperata forest (SF), and Pinus sylvestris var. mongolica forest (MPF). Results showed that soil N mineralization rates (Rmin) differed significantly among forests, with the highest rate in BF (p < 0.05). Soil properties and microbial assemblages accounted for over 50% of the variability in N mineralization. This study indicated that soil environmental factors influenced N mineralization through their regulatory impact on microbial assemblages. Compared with microbial community assemblages (α-diversity, Shannon and Richness), functional genes assemblages were the most important indexes to regulate N mineralization. It was thus determined that microbial functional genes controlled N mineralization in boreal forests. This study clarified the mechanisms of N mineralization and provided a mechanistic understanding to enhance biogeochemical models for forecasting soil N availability, alongside aiding species diversity conservation and fragile ecosystem revitalization in boreal forests.

Enhanced nitrous oxide emission factors due to climate change increase the mitigation challenge in the agricultural sector

Effective nitrogen fertilizer management is crucial for reducing nitrous oxide (N2O) emissions while ensuring food security within planetary boundaries. However, climate change might also interact with management practices to alter N2O emission and emission factors (EFs), adding further uncertainties to estimating mitigation potentials. Here, we developed a new hybrid modeling framework that integrates a machine learning model with an ensemble of eight process-based models to project EFs under different climate and nitrogen policy scenarios. Our findings reveal that EFs are dynamically modulated by environmental changes, including climate, soil properties, and nitrogen management practices. Under low-ambition nitrogen regulation policies, EF would increase from 1.18%-1.22% in 2010 to 1.27%-1.34% by 2050, representing a relative increase of 4.4%-11.4% and exceeding the IPCC tier-1 EF of 1%. This trend is particularly pronounced in tropical and subtropical regions with high nitrogen inputs, where EFs could increase by 0.14%-0.35% (relative increase of 11.9%-17%). In contrast, high-ambition policies have the potential to mitigate the increases in EF caused by climate change, possibly leading to slight decreases in EFs. Furthermore, our results demonstrate that global EFs are expected to continue rising due to warming and regional drying-wetting cycles, even in the absence of changes in nitrogen management practices. This asymmetrical influence of nitrogen fertilizers on EFs, driven by climate change, underscores the urgent need for immediate N2O emission reductions and further assessments of mitigation potentials. This hybrid modeling framework offers a computationally efficient approach to projecting future N2O emissions across various climate, soil, and nitrogen management scenarios, facilitating socio-economic assessments and policy-making efforts.

Carbon sequestration potential and its main drivers in soils under alfalfa (Medicago sativa L.)

As a perennial forage crop, alfalfa (Medicago sativa L.) has been extensively utilized for the vegetation restoration of degraded soil and provides feedstock for forage. Its high usage can be attributed to its high yield potential and the increasing soil organic carbon (SOC) sequestration of alfalfa cultivation. However, the impact of land conversion to alfalfa on SOC content and its underlying drivers remain unclear. We performed a meta-analysis at the global scale to explore the quantified effects of alfalfa cultivation on SOC content and identify its controlling factors. We employed 1699 pairwise data points from 90 publications based on cropland/abandoned land conversion to alfalfa. Globally, cropland (cropland-alfalfa) and abandoned land (abandoned land-alfalfa) conversion to alfalfa enhanced SOC content by 12.1 % and 13.7 %, respectively. Alfalfa exhibited greater SOC content benefits in the surface soils (0-20 cm) with a lower level of initial SOC (<16 g kg-1), regardless of the land conversion type. Cropland-alfalfa was observed to increase SOC content with fertilization, irrigation, and conventional tillage in the long term (>5 years). Furthermore, abandoned land-alfalfa enhanced SOC content in the absence of alfalfa biomass removal and for longer cultivation durations (>5 years). Boosted regression tree analyses indicated variations in soil properties (75 % for cropland-alfalfa and 65 % for abandoned land-alfalfa) as the primary factors driving changes in SOC content. The dominant drivers were determined as the soil layer (51.6 %), cultivation duration (13.1 %), and initial SOC (12.9 %) for cropland-alfalfa, and initial SOC (43.7 %), soil layer (24.6 %) and cultivation duration (17.1 %) for abandoned land-alfalfa. Land conversion to alfalfa has great potential for SOC sequestration, particularly in low-fertility soils. Therefore, alfalfa cultivation is highly recommended for degraded lands due to its SOC sequestration benefits in vegetation restoration.

Patterns and drivers of atmospheric nitrogen deposition retention in global forests

Forests are the largest carbon sink in terrestrial ecosystems, and the impact of nitrogen (N) deposition on this carbon sink depends on the fate of external N inputs. However, the patterns and driving factors of N retention in different forest compartments remain elusive. In this study, we synthesized 408 observations from global forest 15N tracer experiments to reveal the variation and underlying mechanisms of 15N retention in plants and soils. The results showed that the average total ecosystem 15N retention in global forests was 63.04 ± 1.23%, with the soil pool being the main N sink (45.76 ± 1.29%). Plants absorbed 17.28 ± 0.83% of 15N, with more allocated to leaves (5.83 ± 0.63%) and roots (5.84 ± 0.44%). In subtropical and tropical forests, 15N was mainly absorbed by plants and mineral soils, while the organic soil layer in temperate forests retained more 15N. Additionally, forests retained moreN 15 H 4 + $$ {}^{15}\mathrm{N}{\mathrm{H}}_4^{+} $$ thanN 15 O 3 - $$ {}^{15}\mathrm{N}{\mathrm{O}}_3^{-} $$ , primarily due to the stronger capacity of the organic soil layer to retainN 15 H 4 + $$ {}^{15}\mathrm{N}{\mathrm{H}}_4^{+} $$ . The mechanisms of 15N retention varied among ecosystem compartments, with total ecosystem 15N retention affected by N deposition. Plant 15N retention was influenced by vegetative and microbial nutrient demands, while soil 15N retention was regulated by climate factors and soil nutrient supply. Overall, this study emphasizes the importance of climate and nutrient supply and demand in regulating forest N retention and provides data to further explore the impacts of N deposition on forest carbon sequestration.

Biochar dose-dependent impacts on soil bacterial and fungal diversity across the globe

Biochar, a widely used material for soil amendment, has been found to offer numerous advantages in improving soil properties and the habitats for soil microorganisms. However, there is still a lack of global perspectives on the influence of various levels of biochar addition on soil microbial diversity and primary components. Thus, in our study, we performed a global meta-analysis of studies to determine how different doses of biochar affect soil total carbon (C), nitrogen (N), pH, alpha- and beta-diversity, and the major phyla of both bacterial and fungal communities. Our results revealed that biochar significantly increased soil pH by 4 %, soil total C and N by 68 % and 22 %, respectively, in which the positive effects increased with biochar doses. Moreover, biochar promoted soil bacterial richness and evenness by 3-8 % at the biochar concentrations of 1-5 % (w/w), while dramatically shifting bacterial beta-diversity at the doses of >2 % (w/w). Specifically, biochar exhibited significantly positive effects on bacterial phyla of Acidobacteria, Bacteroidetes, Gemmatimonadetes, and Proteobacteria, especially Deltaproteobacteria and Gammaproteobacteria, by 4-10 % depending on the concentrations. On the contrary, the bacterial phylum of Verrucomicrobia and fungal phylum of Basidiomycota showed significant negative responses to biochar by -8 % and -24 %, respectively. Therefore, our meta-analysis provides theoretical support for the development of optimized agricultural management practices by emphasizing biochar application dosing.

Nitrogen dynamics of alpine swamp meadows are less responsive to climate warming than that of alpine meadows

The freeze-thaw cycle mediates permafrost soil hydrothermal status, nitrogen (N) mineralization, and loss. Furthermore, it affects root development and competition among nitrophilic and other species, shaping the pattern of N distribution in alpine ecosystems. However, the specific N dynamics during the growing season and N loss during the non-growing season in response to climate warming under low- and high-moisture conditions are not well documented. Therefore, we added 15N tracers to trace the fate of N in warmed and ambient alpine meadows and alpine swamp meadows in the permafrost region of the Qinghai-Tibet Plateau. During the growing season, warming increased 15N recovery (15Nrec) in shoots of K. humilis, litters, 0-5 and 5-20 cm roots in the alpine meadow by 149.94 % ± 52.87 %, 114.58 % ± 24.43 %, 61.11 % ± 32.27 %, and 97.12 % ± 42.92 %, respectively, while increased 15Nrec of litters by 151.55 % ± 27.06 % in the alpine swamp meadow. During the non-growing season, warming reduced 15N stored in roots by 486.77 % ± 57.90 %, though increased the 15N recovery in 5-20 cm soil depth by 76.68 % ± 39.42 % in the alpine meadow, whereas it did not affect N loss during the non-growing season in the alpine swamp meadow. Overall, warming promoted N utilization by increasing the plant N pool during the growing season, and enhanced root N loss and downward migration during the non-growing season due to the freeze-thaw process, which may result in fine root turnover and cell destruction releasing N in the alpine meadow. Conversely, the N dynamics of alpine swamp meadows were less responsive to climate warming.

Effects of warming on rice production and metabolism process associated with greenhouse gas emissions

Evaluating the impact of global warming on rice production and greenhouse gas (GHG) emissions is critical for ensuring food security and mitigating the consequences of climate change. Nonetheless, the impacts of warming on crop production, GHG emissions, and microbial mechanisms in the single-cropping rice systems remain unclear. Here, a two-year field experiment was conducted to explore the effects of warming (increased by 2.7-3.0 °C on average) in the rice growing season on crop production and functional microorganisms associated with GHG emissions. Results showed that warming resulted in significant reduction (p < 0.01) in the aboveground biomass and grain yield as well as in grain weight, the number of spikelets per panicle, and the seed-setting rate. However, it caused a significant increase (p < 0.01) in the number of panicles by 15.6 % and 34.9 %, respectively. Furthermore, warming significantly increased (p < 0.01) seasonal methane (CH4) emissions but reduced nitrous oxide (N2O) emissions, particularly in 2022.The relative abundance of genes associated with CH4 metabolism and nitrogen metabolism was increased by 40.7 % and 32.7 %, respectively, in response to warming. Moreover, warming had a positive impact on the abundance of genes related to CH4 production and oxidation processes but did not affect the denitrification processes associated with N2O production. These results showed that warming decreased rice yield and biomass in the single cropping rice system but increased CH4 emissions and global warming potential. Taken together, to address the increasing food demand of a growing population and mitigate the impacts of global warming, it is imperative to duce GHG emissions and enhance crop yields.

Impact of persistently high sea surface temperatures on the rhizobiomes of Zostera marina in a Baltic Sea benthocosms

Persistently high marine temperatures are escalating and threating marine biodiversity. The Baltic Sea, warming faster than other seas, is a good model to study the impact of increasing sea surface temperatures. Zostera marina, a key player in the Baltic ecosystem, faces susceptibility to disturbances, especially under chronic high temperatures. Despite the increasing number of studies on the impact of global warming on seagrasses, little attention has been paid to the role of the holobiont. Using an outdoor benthocosm to replicate near-natural conditions, this study explores the repercussions of persistent warming on the microbiome of Z. marina and its implications for holobiont function. Results show that both seasonal warming and chronic warming, impact Z. marina roots and sediment microbiome. Compared with roots, sediments demonstrate higher diversity and stability throughout the study, but temperature effects manifest earlier in both compartments, possibly linked to premature Z. marina die-offs under chronic warming. Shifts in microbial composition, such as an increase in organic matter-degrading and sulfur-related bacteria, accompany chronic warming. A higher ratio of sulfate-reducing bacteria compared to sulfide oxidizers was found in the warming treatment which may result in the collapse of the seagrasses, due to toxic levels of sulfide. Differentiating predicted pathways for warmest temperatures were related to sulfur and nitrogen cycles, suggest an increase of the microbial metabolism, and possible seagrass protection strategies through the production of isoprene. These structural and compositional variations in the associated microbiome offer early insights into the ecological status of seagrasses. Certain taxa/genes/pathways may serve as markers for specific stresses. Monitoring programs should integrate this aspect to identify early indicators of seagrass health. Understanding microbiome changes under stress is crucial for the use of potential probiotic taxa to mitigate climate change effects. Broader-scale examination of seagrass-microorganism interactions is needed to leverage knowledge on host-microbe interactions in seagrasses.

Impact of meteorological factors on Cd availability and average concentration prediction in rice growth cycle

During the rice growth cycle, the average available cadmium concentration (CA-Cd) in the soil determines the Cd content in rice plant. Given defined soil properties and rice varieties, the meteorological factors play a crucial role in soil's available cadmium concentration (CCd) during the rice growth cycle. Thus, it is significant to investigate the influence of meteorological factors in CCd during the rice growth cycle and develop a predictive model for CA-Cd. The rice was cultivated under seven different sowing dates in Cd and As-contaminated soil in Hunan Province. Studied the impact of meteorological factors on paddy soil. The results showed that accumulated temperature (AT) and total precipitation (TP) were key factors affecting the soil CCd. The correlation coefficients between AT and TP with soil CA-Cd were 0.98 and -0.94 (p < 0.01), respectively. However, there was no significant correlation with CAs. AT mainly influenced the CCd during the grouting and maturity stages. A straightforward empirical prediction model was developed, capable of accurately forecasting CA-Cd during the rice growth cycle by considering meteorological factors and the initial soil CCd. This study supported a novel foundation for the precise prediction of Cd content in rice.

Assessment of carbon sequestration potential of mining areas under ecological restoration in China

Mining activities aggravate the ecological degradation and emission of greenhouse gases throughout the world, thereby affecting the global climate and posing a serious threat to the ecological safety. Vegetation restoration is considered to be an effective and sustainable strategy to improve the post-mining soil quality and functions. However, we still have a limited knowledge of the impact of vegetation restoration on carbon sequestration potential in mining areas. In this pursuit, the present study was envisaged to integrate the findings from studies on soil organic carbon (SOC) sequestration in mining areas under vegetation restoration with field monitoring data. The carbon sequestration potential under vegetation restoration in China's mining areas was estimated by using a machine learning model. The results showed that (1) Vegetation restoration exhibited a consistently positive impact on the changes in the SOC reserves. The carbon sequestration potential was the highest in mixed forests, followed by broad-leaved forests, coniferous forests, grassland, shrubland, and farmland; (2) The number of years of vegetation restoration and mean annual precipitation were found to be the important moderating variables affecting the SOC reserves in reclaimed soils in mining areas; (3) There were significant differences in the SOC sequestration potential under different vegetation restoration scenarios in mining areas in China. The SOC sequestration potential reached up to 9.86 million t C a-1, when the soil was restored to the initial state. Based on the meta-analysis, the maximal attainable SOC sequestration potential was found to be 4.26 million t C a-1. The SOC sequestration potential reached the highest level of 12.86 million t C a-1, when the optimal vegetation type in a given climate was restored. The results indicated the importance of vegetation restoration for improving the soil sequestration potential in mining areas. The time lag in carbon sequestration potential for different vegetation types in mining areas was also revealed. Our findings can assist the development of ecological restoration regimens in mining areas to mitigate the global climate change.

Warming-Induced Stimulation of Soil N2O Emissions Counteracted by Elevated CO2 from Nine-Year Agroecosystem Temperature and Free Air Carbon Dioxide Enrichment

Globally, agricultural soils account for approximately one-third of anthropogenic emissions of the potent greenhouse gas and stratospheric ozone-depleting substance nitrous oxide (N2O). Emissions of N2O from agricultural soils are affected by a number of global change factors, such as elevated air temperatures and elevated atmospheric carbon dioxide (CO2). Yet, a mechanistic understanding of how these climatic factors affect N2O emissions in agricultural soils remains largely unresolved. Here, we investigate the soil N2O emission pathway using a 15N tracing approach in a nine-year field experiment using a combined temperature and free air carbon dioxide enrichment (T-FACE). We show that the effect of CO2 enrichment completely counteracts warming-induced stimulation of both nitrification- and denitrification-derived N2O emissions. The elevated CO2 induced decrease in pH and labile organic nitrogen (N) masked the stimulation of organic carbon and N by warming. Unexpectedly, both elevated CO2 and warming had little effect on the abundances of the nitrifying and denitrifying genes. Overall, our study confirms the importance of multifactorial experiments to understand N2O emission pathways from agricultural soils under climate change. This better understanding is a prerequisite for more accurate models and the development of effective options to combat climate change.

Distinct latitudinal patterns and drivers of topsoil nitrogen and phosphorus across urban forests in eastern China

Nitrogen (N) and phosphorus (P) are the two most important macronutrients supporting forest growth. Unprecedented urbanization has created growing areas of urban forests that provide key ecosystem services for city dwellers. However, the large-scale patterns of soil N and P content remain poorly understood in urban forests. Based on a systematic soil survey in urban forests from nine large cities across eastern China, we examined the spatial patterns and key drivers of topsoil (0-20 cm) total N content, total P content, and N:P ratio. Topsoil total N content was found to change significantly with latitude in the form of an inverted parabolic curve, while total P content showed an opposite latitudinal pattern. Variance partition analysis indicated that regional-scale patterns of topsoil total N and P contents were dominated by climatic drivers and partially regulated by time and pedogenic drivers. Conditional regression analyses showed a significant increase in topsoil total N content with lower mean annual temperature (MAT) and higher mean annual precipitation (MAP), while topsoil total P content decreased significantly with higher MAP. Topsoil total N content also increased significantly with the age of urban park and varied with pre-urban soil type, while no such effects were found for topsoil total P content. Moreover, topsoil N:P ratio showed a latitudinal pattern similar to that of topsoil total N content and also increased significantly with lower MAT and higher MAP. Our findings demonstrate distinct latitudinal trends of topsoil N and P contents and highlight a dominant role of climatic drivers in shaping the large-scale patterns of topsoil nutrients in urban forests.

Soil recalcitrant but not labile organic nitrogen mineralization contributes to microbial nitrogen immobilization and plant nitrogen uptake

Soil organic nitrogen (N) mineralization not only supports ecosystem productivity but also weakens carbon and N accumulation in soils. Recalcitrant (mainly mineral-associated organic matter) and labile (mainly particulate organic matter) organic materials differ dramatically in nature. Yet, the patterns and drivers of recalcitrant (MNrec) and labile (MNlab) organic N mineralization rates and their consequences on ecosystem N retention are still unclear. By collecting MNrec (299 observations) and MNlab (299 observations) from 57 15N tracing studies, we found that soil pH and total N were the master factors controlling MNrec and MNlab, respectively. This was consistent with the significantly higher rates of MNrec in alkaline soils and of MNlab in natural ecosystems. Interestingly, our analysis revealed that MNrec directly stimulated microbial N immobilization and plant N uptake, while MNlab stimulated the soil gross autotrophic nitrification which discouraged ammonium immobilization and accelerated nitrate production. We also noted that MNrec was more efficient at lower precipitation and higher temperatures due to increased soil pH. In contrast, MNlab was more efficient at higher precipitation and lower temperatures due to increased soil total N. Overall, we suggest that increasing MNrec may lead to a conservative N cycle, improving the ecosystem services and functions, while increasing MNlab may stimulate the potential risk of soil N loss.

Salinity and pH related microbial nitrogen removal in the largest coastal lagoon of Chinese mainland (Pinqing Lagoon)

Coastal lagoon is critical habitat for human and provides a wide range of ecosystem services. These vital habitats are now threatened by waste discharge and eutrophication. Previous studies suggest that the pollution mitigation of coastal lagoon relies on the water exchange with open sea, and the role of microbial processes inside the lagoon is overlooked. This study takes the Pinqing Lagoon which is the largest coastal lagoon in Chinese mainland as example. The distribution of nutrients, microbial activity of nitrogen removal and community structure of denitrifying bacteria in sediment are analyzed. The results showed that the nutrient in sediment represented by DIN (1.65-12.78 mg kg-1), TOM (0.59-8.72 %) and TN (0.14-1.93 mg g-1) are at high levels and are enriched at the terrestrial impacted zone (TZ). The microbial nitrogen removal is active at 0.27-19.76 μmol N kg-1 h-1 in sediment and denitrification is the dominate pathway taking 51.44-98.71 % of total N removal. The composition of the denitrifying microbial community in marine impacted zone (MZ) is close to that of ocean and estuary, but differs considerably with those of TZ and transition zone (TM). The denitrification activity is mainly controlled by salinity and pH, and the denitrifying bacterial community composition related to the nutrient parameters of TN, TOM, etc. Our study suggested that the distribution of nutrients, microbial activity of nitrogen removal and community structure in Lagoon are the combined effects of terrestrial input and exchange with open sea. The microbial processes play important role in the nitrogen removal of coastal lagoon.

Optimizing potassium and nitrogen fertilizer strategies to mitigate greenhouse gas emissions in global agroecosystems

The efficient management of fertilizer application in agriculture is vital for both food security and mitigating greenhouse gas (GHG) emissions. However, as potassium fertilizer (KF) is an essential soil nutrient, its impact on soil GHG emissions has received little attention. To address this knowledge gap and identify key determinants of GHG emissions, we conducted a comprehensive meta-analysis of 205 independent experiments conducted worldwide. Our results revealed that, in comparison to sole nitrogen fertilizer (NF) application, the concurrent use of KF elevated nitrous oxide (N2O) and methane (CH4) emissions by 39.5 % and 21.1 %, respectively, while concurrently reducing carbon dioxide (CO2) emissions by 8.1 %. The ratio of nitrogen and potassium fertilizer input (NF/KF) is identified as the primary factor explaining the variation in N2O emissions, whereas the type of KF plays a crucial role in determining CH4 and CO2 emissions. We observed a significant negative correlation between the NF/KF ratio and response ratios of N2O and CH4 emissions and a positive correlation with CO2 emissions response ratios. Furthermore, our findings indicate that when the NF/KF ratio surpasses 1.97, 4.61, and 3.78, respectively, the impact of KF on reducing N2O, CH4, and CO2 emissions stabilizes. Overall, our results underscore that the global integration of KF into agricultural practices significantly influences N2O and CH4 emissions, while simultaneously reducing CO2 emissions at a large scale. These findings provide a foundational framework and practical guidance for optimizing fertilizer application in the development of GHG emission reduction models.

Microplastics induced the differential responses of microbial-driven soil carbon and nitrogen cycles under warming

The input of microplastics (MPs) and warming interfere with soil carbon (C) or nitrogen (N) cycles. Although the effects of warming and/or MPs on the cycles have been well studied, the biological coupling of microbial-driven cycles was neglected. Here, the synergistic changes of the cycles were investigated using batch incubation experiments. As results, the influences of MPs were not significant at 15, 20, and 25 °C, and yet, high temperature (i.e., 30 °C) reduced the respiration of high-concentration MPs-amended soil by 9.80%, and increased dissolved organic carbon (DOC) by 14.74%. In contrast, high temperature did not change the effect of MPs on N. The decrease of microbial biomass carbon (MBC) and the constant of microbial biomass nitrogen (MBN) indicated that microbial N utilization was enhanced, which might be attributed to the enrichments of adapted populations, such as Conexibacter, Acidothermus, and Acidibacter. These observations revealed that high temperature and MPs drove the differential response of soil C and N cycles. Additionally, the transcriptomic provided genomic evidence of the response. In summary, the high temperature was a prerequisite for the MPs-driven response, which underscored new ecological risks of MPs under global warming and emphasized the need for carbon emission reduction and better plastic product regulation.

Arbuscular mycorrhizal fungi offset NH3 emissions in temperate meadow soil under simulated warming and nitrogen deposition

Most soil ammonia (NH3) emissions originate from soil nitrogen (N) that has been in the form of exchangeable ammonium. Emitted NH3 not only induces nutrient loss but also has adverse effects on the cycling of N and accelerates global warming. There is evidence that arbuscular mycorrhizal (AM) fungi can alleviate N loss by reducing N2O emissions in N-limited ecosystems, however, some studies have also found that global changes, such as warming and N deposition, can affect the growth and development of AM fungi and alter their functionality. Up to now, the impact of AM fungi on NH3 emissions, and whether global changes reduce the AM fungi's contribution to NH3 emissions reduction, has remained unclear. In this study, we examined how warming, N addition, and AM fungi alter NH3 emissions from high pH saline soils typical of a temperate meadow through a controlled microscopic experiment. The results showed that warming significantly increased soil NH3 emissions, but N addition and combined warming plus N addition had no impact. Inoculations with AM fungi strongly reduced NH3 emissions both under warming and N addition, but AM fungi effects were more pronounced under warming than following N addition. Inoculation with AM fungi reduced soil NH4+-N content and soil pH, and increased plant N content and soil net N mineralization rate while increasing the abundance of ammonia-oxidizing bacterial (AOB) gene. Structural equation modeling (SEM) shows that the regulation of NH3 emissions by AM fungi may be related to soil NH4+-N content and soil pH. These findings highlight that AM fungi can reduce N loss in the form of NH3 by increasing N turnover and uptake under global changes; thus, AM fungi play a vital role in alleviating the aggravation of N loss caused by global changes and in mitigating environmental pollution in the future.

Global warming potential assessment under reclaimed water and livestock wastewater irrigation coupled with co-application of inhibitors and biochar

The application of nitrification inhibitors (nitrapyrin) and urease inhibitors (N-(N-butyl) thiophosphoric triamide) under conventional water resources has been considered as an effective means to improve nitrogen utilization efficiency and mitigate soil greenhouse gas emissions. However, it is not known whether the inhibitors still have an inhibitory effect under unconventional water resources (reclaimed water and livestock wastewater) irrigation and whether their use in combination with biochar improves the mitigation effect. Therefore, unconventional water resources were used for irrigation, with groundwater (GW) control. Nitrapyrin and N-(N-butyl) thiophosphoric triamide were used alone or in combination with biochar in a pot experiment, and CO2, N2O, and CH4 emissions were measured. The results showed that irrigation of unconventional water resources exacerbated global warming potential (GWP). All exogenous substance treatments increased CO2 and CH4 emissions and suppressed N2O emissions, independent of the type of water, compared to no substances (NS). The inhibitors were ineffective in reducing the GWP whether or not in combination with biochar, and the combined application of inhibitors with biochar further increased the GWP. This study suggests that using inhibitors and biochar in combination to regulate the greenhouse effect under unconventional water resources irrigation should be done with caution.

Widespread cooling of topsoil under nitrogen enrichment and implication for soil carbon flux

Increasing reactive nitrogen (N) to terrestrial ecosystems is considered to enhance ecosystem carbon sink, which plays a critical role in ameliorating global warming. Besides this indirect buffering of temperature rise, the N-induced enhancement of vegetation growth may exert a biophysical cooling effect on soils. However, the magnitude and drivers of this cooling effect have rarely been evaluated. Here, using a global meta-analysis with 321 paired measurements, we demonstrated a widespread topsoil cooling (-0.30 °C in average) under anthropogenic N enrichment, which was primarily associated with the increase in aboveground biomass. This biophysical cooling could also buffer topsoil temperature rise by an average of 0.39 °C under experimental warming. Further, the reduced soil temperature was found to contribute to a reduction of soil respiration rate as temperature declines gradually. Overall, our results underpin a previously overlooked function of global N enrichment-the lowering of topsoil temperature, which suggests that the warming of topsoil may not be as fast as previously predicted under future global change scenarios. This biophysical cooling effect will also slow down soil carbon emissions and further mitigate climate warming.

Global N2O emissions from our planet: Which fluxes are affected by man, and can we reduce these?

In some places, N2O emissions have doubled during the last 2-3 decades. Therefore, it is crucial to identify N2O emission hotspots from terrestrial and aquatic systems. Large variation in N2O emissions occur in managed as well as in natural areas. Natural unmanaged tropical and subtropical wet forests are important N2O sources globally. Emission hotspots, often coupled to human activities, vary across climate zones, whereas N2O emissions are most often a few kg N ha-1 year-1 from arable soils, drained organic soils in the boreal and temperate zones often release 20-30 kg N ha-1 year-1. Similar high N2O emissions occur from some tropical crops like tea, palm oil and bamboo. This strong link between increased N2O emissions and human activities highlight the potential to mitigate large emissions. In contrast, water where oxic and anoxic conditions meet are N2O emission hotspots as well, but not possible to reduce.

Effects of simulated warming on soil microbial community diversity and composition across diverse ecosystems

Soil warming can directly affect the microbial community, or indirectly affect the microbial community by affecting soil moisture, nutrient availability, vegetation growth, etc. However, the response of microorganisms to soil warming is complex, and there is no uniform conclusion on the impact and mechanism of warming on microbial diversity. As the global climate gradually warms, a comprehensive assessment of warming on soil microbial community changes is essential to understand and predict the response of microbial geochemical processes to soil warming. Here, we perform a meta-analysis of studies to investigate changes in soil microbial communities along soil warming gradients and the response of soil microbes to elevated temperature in different ecosystems. We found that the α diversity index of soil microorganisms decreased significantly with the increase in temperature, and the β diversity altered with the increase in soil temperature and the shifts in ecosystem. Most bacteria only alter when the temperature rises higher. Compared to the non-warming condition, the relative abundance of Acidobacteria, Proteobacteria, Bacteroidetes, Planctomycetes and Verrucomicrobia decreased by 19 %, 11 %, 19 %, 8 % and 6 %, respectively, and the relative abundance of Firmicutes increased by 34 %. Compared to farmland, forest, grassland and tundra ecosystems, soil microorganisms in wetland ecosystems were more sensitive to temperature increase, and the changes in bacteria were consistent with the overall alterations. This meta-analysis revealed significant changes in the composition of microbial communities on soil warming. With the decrease in biodiversity under increasing temperature conditions, these dominant microbiomes, which can grow well under high-temperature conditions, will play a stronger role in regulating nutrient and energy flow. Our analysis adds a global perspective to the temperature response of soil microbes, which is critical to improving our understanding of the mechanisms of how soil microbes change in response to climate warming.

Seasonal changes in N-cycling functional genes in sediments and their influencing factors in a typical eutrophic shallow lake, China

N-cycling processes mediated by microorganisms are directly linked to the eutrophication of lakes and ecosystem health. Exploring the variation and influencing factors of N-cycling-related genes is of great significance for controlling the eutrophication of lakes. However, seasonal dynamics of genomic information encoding nitrogen (N) cycling in sediments of eutrophic lakes have not yet been clearly addressed. We collected sediments in the Baiyangdian (BYD) Lake in four seasons to explore the dynamic variation of N-cycling functional genes based on a shotgun metagenome sequencing approach and to reveal their key influencing factors. Our results showed that dissimilatory nitrate reduction (DNRA), assimilatory nitrate reduction (ANRA), and denitrification were the dominant N-cycling processes, and the abundance of nirS and amoC were higher than other functional genes by at least one order of magnitude. Functional genes, such as nirS, nirK and amoC, generally showed a consistent decreasing trend from the warming season (i.e., spring, summer, fall) to the cold season (i.e., winter). Furthermore, a significantly higher abundance of nitrification functional genes (e.g., amoB, amoC and hao) in spring and denitrification functional genes (e.g., nirS, norC and nosZ) in fall were observed. N-cycling processes in four seasons were influenced by different dominant environmental factors. Generally, dissolved organic carbon (DOC) or sediment organic matter (SOM), water temperature (T) and antibiotics (e.g., Norfloxacin and ofloxacin) were significantly correlated with N-cycling processes. The findings imply that sediment organic carbon and antibiotics may be potentially key factors influencing N-cycling processes in lake ecosystems, which will provide a reference for nitrogen management in eutrophic lakes.

Isotopomeric Peak Assignment for N2O in Cross-Labeling Experiments by Fiber-Enhanced Raman Multigas Spectroscopy

Human intervention in nature, especially fertilization, greatly increased the amount of N2O emission. While nitrogen fertilizer is used to improve nitrogen availability and thus plant growth, one negative side effect is the increased emission of N2O. Successful regulation and optimization strategies require detailed knowledge of the processes producing N2O in soil. Nitrification and denitrification, the main processes responsible for N2O emissions, can be differentiated using isotopic analysis of N2O. The interplay between these processes is complex, and studies to unravel the different contributions require isotopic cross-labeling and analytical techniques that enable tracking of the labeled compounds. Fiber-enhanced Raman spectroscopy (FERS) was exploited for sensitive quantification of N2O isotopomers alongside N2, O2, and CO2 in multigas compositions and in cross-labeling experiments. FERS enabled the selective and sensitive detection of specific molecular vibrations that could be assigned to various isotopomer peaks. The isotopomers 14N15N16O (2177 cm-1) and 15N14N16O (2202 cm-1) could be clearly distinguished, allowing site-specific measurements. Also, isotopomers containing different oxygen isotopes, such as 14N14N17O, 14N14N18O, 15N15N16O, and 15N14N18O could be identified. A cross-labeling showed the capability of FERS to disentangle the contributions of nitrification and denitrification to the total N2O fluxes while quantifying the total sample headspace composition. Overall, the presented results indicate the potential of FERS for isotopic studies of N2O, which could provide a deeper understanding of the different pathways of the nitrogen cycle.