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For: Nishimura Y, Yoshida T, Kuronishi M, Uehara H, Ogata H, Goto S. ViPTree: the viral proteomic tree server. Bioinformatics 2018;33:2379-2380. [PMID: 28379287 DOI: 10.1093/bioinformatics/btx157] [Citation(s) in RCA: 497] [Impact Index Per Article: 71.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2016] [Accepted: 03/21/2017] [Indexed: 11/12/2022]  Open
Number Cited by Other Article(s)
51
Mota LC, Silva EC, Quinde CA, Cieza B, Basu A, Rodrigues LMR, Vila MMDC, Balcão VM. Potential of a newly isolated lytic bacteriophage to control Pseudomonas coronafaciens pv. garcae in coffee plants: Molecular characterization with in vitro and ex vivo experiments. Enzyme Microb Technol 2025;184:110573. [PMID: 39700746 DOI: 10.1016/j.enzmictec.2024.110573] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2024] [Revised: 12/03/2024] [Accepted: 12/13/2024] [Indexed: 12/21/2024]
52
Zanaty AA, Dishisha T, El-Sayed-Ahmed MAEG, Abdel-Fattah MM, Ahmed KA, Abdelkader K. Characterization, genomic analysis and preclinical evaluation of the lytic Staphylococcus bacteriophage PSK against methicillin-resistant Staphylococcus aureus wound isolate. Ann Clin Microbiol Antimicrob 2025;24:17. [PMID: 40022070 PMCID: PMC11871620 DOI: 10.1186/s12941-025-00783-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2024] [Accepted: 02/05/2025] [Indexed: 03/03/2025]  Open
53
Mirza KA, Tchatchiashvili T, Marquet M, Nietzsche S, Pletz MW, Makarewicz O. Characterization and genome analysis of novel Klebsiella pneumoniae phage vbKpUKJ_2 isolated from hospital sewage water. BMC Microbiol 2025;25:96. [PMID: 40011819 PMCID: PMC11863478 DOI: 10.1186/s12866-025-03813-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2024] [Accepted: 02/07/2025] [Indexed: 02/28/2025]  Open
54
Nour El-Din HT, Kettal M, Granados Maciel JC, Beaudoin G, Oktay U, Hrapovic S, Sad S, Dennis JJ, Peters DL, Chen W. Isolation, Characterization, and Genomic Analysis of Bacteriophages Against Pseudomonas aeruginosa Clinical Isolates from Early and Chronic Cystic Fibrosis Patients for Potential Phage Therapy. Microorganisms 2025;13:511. [PMID: 40142404 PMCID: PMC11945000 DOI: 10.3390/microorganisms13030511] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2025] [Revised: 02/20/2025] [Accepted: 02/21/2025] [Indexed: 03/28/2025]  Open
55
Cao L, Mi J, He Y, Xuan G, Wang J, Li M, Tong Y. Quorum sensing inhibits phage infection by regulating biofilm formation of P. aeruginosa PAO1. J Virol 2025;99:e0187224. [PMID: 39745428 PMCID: PMC11853092 DOI: 10.1128/jvi.01872-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2024] [Accepted: 12/13/2024] [Indexed: 02/26/2025]  Open
56
Gittrich MR, Sanderson CM, Wainaina JM, Noel CM, Leopold JE, Babusci E, Selbes SC, Farinas OR, Caine J, Davis II J, Mutalik VK, Hyman P, Sullivan MB. Isolation and characterization of 24 phages infecting the plant growth-promoting rhizobacterium Klebsiella sp. M5al. PLoS One 2025;20:e0313947. [PMID: 39982899 PMCID: PMC11845039 DOI: 10.1371/journal.pone.0313947] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2024] [Accepted: 11/03/2024] [Indexed: 02/23/2025]  Open
57
Ali Z, Abdelkader K, Abdel-Fattah MM, Azmy AF, El-Gendy AO, Dishisha T. Therapeutic potential of a newly isolated bacteriophage against multi-drug resistant Enterococcus faecalis infections: in vitro and in vivo characterization. BMC Microbiol 2025;25:80. [PMID: 39979834 PMCID: PMC11841226 DOI: 10.1186/s12866-025-03785-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2024] [Accepted: 01/26/2025] [Indexed: 02/22/2025]  Open
58
Singh PSS, Toh WK, Lim BH, Wong HL, Loh PC. Complete genome sequence analysis of the novel bacteriophage PA-1 infecting phytopathogenic Pantoea ananatis in Malaysia. Arch Virol 2025;170:60. [PMID: 39961917 DOI: 10.1007/s00705-025-06239-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2024] [Accepted: 01/03/2025] [Indexed: 03/08/2025]
59
Liu S, Lei T, Tan Y, Huang X, Zhao W, Zou H, Su J, Zeng J, Zeng H. Discovery, structural characteristics and evolutionary analyses of functional domains in Acinetobacter baumannii phage tail fiber/spike proteins. BMC Microbiol 2025;25:73. [PMID: 39939914 PMCID: PMC11823257 DOI: 10.1186/s12866-025-03790-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2024] [Accepted: 01/28/2025] [Indexed: 02/14/2025]  Open
60
Savich V, Akhremchuk A, Herasimovich A, Leanovich S, Valentovich L, Sidarenka A. Isolation, characterization, and whole-genome analysis of the novel temperate bacteriophage Ph-p5 infecting Glutamicibacter halophytocola. Arch Virol 2025;170:46. [PMID: 39907824 DOI: 10.1007/s00705-025-06225-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2024] [Accepted: 11/19/2024] [Indexed: 02/06/2025]
61
Rajab AAH, Khafagy ES, Lila ASA, Yousef N, Askoura M. Combating enteropathogenic and multidrug resistant Escherichia coli using the lytic bacteriophage vB_EcoM_ECO78, which disrupts bacterial biofilm formation and exhibits a remarkable environmental stability. J Appl Microbiol 2025;136:lxaf028. [PMID: 39919762 DOI: 10.1093/jambio/lxaf028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2024] [Revised: 01/31/2025] [Accepted: 02/06/2025] [Indexed: 02/09/2025]
62
Uskudar-Guclu A, Yalcin S. A novel Enterococcus faecalis bacteriophage Ef212: biological and genomic features. Int Microbiol 2025;28:365-375. [PMID: 38935199 DOI: 10.1007/s10123-024-00547-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2024] [Revised: 05/30/2024] [Accepted: 06/14/2024] [Indexed: 06/28/2024]
63
Weinheimer AR, Ha AD, Aylward FO. Towards a unifying phylogenomic framework for tailed phages. PLoS Genet 2025;21:e1011595. [PMID: 39908317 PMCID: PMC11835377 DOI: 10.1371/journal.pgen.1011595] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2024] [Revised: 02/18/2025] [Accepted: 01/28/2025] [Indexed: 02/07/2025]  Open
64
Jintasakul V, Pattano J, Preeprem S, Mittraparp-Arthorn P. Characterization and genome analysis of lytic Vibrio phage VPK8 with potential in lysing Vibrio parahaemolyticus isolates from clinical and seafood sources. Virol J 2025;22:21. [PMID: 39885536 PMCID: PMC11783711 DOI: 10.1186/s12985-025-02637-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2024] [Accepted: 01/20/2025] [Indexed: 02/01/2025]  Open
65
Bandoo RA, Kraberger S, Ozturk C, Lund MC, Zhu Q, Cook C, Smith B, Varsani A. Identification of Diverse Bacteriophages Associated with Bees and Hoverflies. Viruses 2025;17:201. [PMID: 40006956 PMCID: PMC11860568 DOI: 10.3390/v17020201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2024] [Revised: 01/24/2025] [Accepted: 01/27/2025] [Indexed: 02/27/2025]  Open
66
Mathur Y, Boyd CM, Farnham JE, Monir MM, Islam MT, Sultana M, Ahmed T, Alam M, Seed KD. Capturing dynamic phage-pathogen coevolution by clinical surveillance. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.01.29.635557. [PMID: 39975409 PMCID: PMC11838301 DOI: 10.1101/2025.01.29.635557] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 02/21/2025]
67
Liu X, Tang Y, Chen H, Liu JX, Sun HZ. Rumen DNA virome and its relationship with feed efficiency in dairy cows. MICROBIOME 2025;13:14. [PMID: 39819730 PMCID: PMC11740651 DOI: 10.1186/s40168-024-02019-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2024] [Accepted: 12/19/2024] [Indexed: 01/19/2025]
68
Negrete-Méndez H, Valencia-Toxqui G, Martínez-Peñafiel E, Medina-Contreras O, Fernández-Ramírez F, Morales-Ríos E, Navarro-González LJ, Torres-Flores JM, Kameyama L. A Lambda-evo (λevo) phage platform for Zika virus EDIII protein display. Appl Microbiol Biotechnol 2025;109:8. [PMID: 39820667 PMCID: PMC11739229 DOI: 10.1007/s00253-024-13380-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2024] [Revised: 12/04/2024] [Accepted: 12/06/2024] [Indexed: 01/19/2025]
69
Leshkasheli L, Kusradze I, Bolkvadze D, Askilashvili L, Chichashvili M, Tsertsvadze G, Zaldastanishvili E. Klebsiella pneumoniae Phage M198 and Its Therapeutic Potential. Viruses 2025;17:115. [PMID: 39861904 PMCID: PMC11768853 DOI: 10.3390/v17010115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2024] [Revised: 01/13/2025] [Accepted: 01/15/2025] [Indexed: 01/27/2025]  Open
70
Kyrkou I, Bartell J, Lechuga A, Lood C, Marvig RL, Lavigne R, Molin S, Krogh Johansen H. Pseudomonas aeruginosa maintains an inducible array of novel and diverse prophages over lengthy persistence in cystic fibrosis lungs. FEMS Microbiol Lett 2025;372:fnaf017. [PMID: 39890605 PMCID: PMC11846083 DOI: 10.1093/femsle/fnaf017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2024] [Revised: 11/24/2024] [Accepted: 01/30/2025] [Indexed: 02/03/2025]  Open
71
Yakubovskij VI, Morozova VV, Kozlova YN, Tikunov AY, Fedorets VA, Zhirakovskaya EV, Babkin IV, Bardasheva AV, Tikunova NV. Phage vB_KlebPS_265 Active Against Resistant/MDR and Hypermucoid K2 Strains of Klebsiella pneumoniae. Viruses 2025;17:83. [PMID: 39861872 PMCID: PMC11769527 DOI: 10.3390/v17010083] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2024] [Revised: 12/30/2024] [Accepted: 01/01/2025] [Indexed: 01/27/2025]  Open
72
Xu T, Ni Y, Li H, Wu S, Yan S, Chen L, Yu Y, Wang Y. Discovery and characterization of complete genomes of 38 head-tailed proviruses in four predominant phyla of archaea. Microbiol Spectr 2025;13:e0049224. [PMID: 39545734 PMCID: PMC11705971 DOI: 10.1128/spectrum.00492-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2024] [Accepted: 09/23/2024] [Indexed: 11/17/2024]  Open
73
Park EJ, Lee S, Na JB, Kim YB, Lee KM, Park SY, Kim JH. Characterization of Broad Spectrum Bacteriophage vB ESM-pEJ01 and Its Antimicrobial Efficacy Against Shiga Toxin-Producing Escherichia coli in Green Juice. Microorganisms 2025;13:103. [PMID: 39858871 PMCID: PMC11767321 DOI: 10.3390/microorganisms13010103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2024] [Revised: 12/28/2024] [Accepted: 12/30/2024] [Indexed: 01/27/2025]  Open
74
Osei EK, O'Hea R, Cambillau C, Athalye A, Hille F, Franz CMAP, O'Doherty Á, Wilson M, Murray GGR, Weinert LA, Manzanilla EG, Mahony J, Kenny JG. Isolation of phages infecting the zoonotic pathogen Streptococcus suis reveals novel structural and genomic characteristics. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.01.07.631744. [PMID: 39829746 PMCID: PMC11741397 DOI: 10.1101/2025.01.07.631744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 01/22/2025]
75
Yu C, Yu M, Ma R, Wei S, Jin M, Jiao N, Zheng Q, Zhang R, Feng X. A novel Alteromonas phage with tail fiber containing six potential iron-binding domains. Microbiol Spectr 2025;13:e0093424. [PMID: 39565130 PMCID: PMC11705849 DOI: 10.1128/spectrum.00934-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2024] [Accepted: 09/20/2024] [Indexed: 11/21/2024]  Open
76
Rolland C, Wittmann J, Reimer LC, Sardà Carbasse J, Schober I, Dudek CA, Ebeling C, Koblitz J, Bunk B, Overmann J. PhageDive: the comprehensive strain database of prokaryotic viral diversity. Nucleic Acids Res 2025;53:D819-D825. [PMID: 39373542 PMCID: PMC11701545 DOI: 10.1093/nar/gkae878] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2024] [Revised: 09/18/2024] [Accepted: 09/25/2024] [Indexed: 10/08/2024]  Open
77
Patel KM, Seed KD. A Class 1 OLD family nuclease encoded by Vibrio cholerae is countered by a vibriophage-encoded direct inhibitor. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.01.06.631583. [PMID: 39829814 PMCID: PMC11741312 DOI: 10.1101/2025.01.06.631583] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 01/22/2025]
78
Li A, Chen C, Li Y, Wang Y, Li X, Zhu Q, Zhang Y, Tian S, Xia Q. Characterisation of a new virulent phage isolated from Hainan Island with potential against multidrug-resistant Pseudomonas aeruginosa infections. Res Microbiol 2025;176:104250. [PMID: 39477080 DOI: 10.1016/j.resmic.2024.104250] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2024] [Revised: 10/26/2024] [Accepted: 10/27/2024] [Indexed: 11/04/2024]
79
Vidigal PMP, Hungaro HM. Genome sequencing of Escherichia coli phage UFJF_EcSW4 reveals a novel lytic Kayfunavirus species. 3 Biotech 2025;15:10. [PMID: 39691801 PMCID: PMC11646959 DOI: 10.1007/s13205-024-04172-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2024] [Accepted: 11/24/2024] [Indexed: 12/19/2024]  Open
80
Prabhu A, Zaugg J, Chan CX, McIlroy SJ, Rinke C. Insights Into Phylogeny, Diversity and Functional Potential of Poseidoniales Viruses. Environ Microbiol 2025;27:e70017. [PMID: 39777783 PMCID: PMC11706807 DOI: 10.1111/1462-2920.70017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2024] [Revised: 11/07/2024] [Accepted: 11/26/2024] [Indexed: 01/11/2025]
81
Pascual-Benito M, Méndez J, Ramos-Barbero MD, Jorba-Plassa A, Martín-Díaz J, Blanch AR. Efficient quantification of somatic coliphages in water: Development and validation of the Enumera® Rapid kit. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;957:177500. [PMID: 39551208 DOI: 10.1016/j.scitotenv.2024.177500] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2024] [Revised: 11/06/2024] [Accepted: 11/08/2024] [Indexed: 11/19/2024]
82
Oluwarinde BO, Ajose DJ, Abolarinwa TO, Montso PK, Njom HA, Ateba CN. Molecular characterization and safety properties of multi drug-resistant Escherichia coli O157:H7 bacteriophages. BMC Microbiol 2024;24:528. [PMID: 39695941 DOI: 10.1186/s12866-024-03691-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Accepted: 12/06/2024] [Indexed: 12/20/2024]  Open
83
Wang W, Wang H, Zou X, Liu Y, Zheng K, Chen X, Wang X, Sun S, Yang Y, Wang M, Shao H, Liang Y. A novel virus potentially evolved from the N4-like viruses represents a unique viral family: Poorviridae. Appl Environ Microbiol 2024;90:e0155924. [PMID: 39570022 DOI: 10.1128/aem.01559-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2024] [Accepted: 09/27/2024] [Indexed: 11/22/2024]  Open
84
Tellez-Carrasquilla S, Salazar-Ospina L, Jiménez JN. High activity and specificity of bacteriophage cocktails against carbapenem-resistant Klebsiella pneumoniae belonging to the high-risk clones CG258 and ST307. Front Microbiol 2024;15:1502593. [PMID: 39717270 PMCID: PMC11663894 DOI: 10.3389/fmicb.2024.1502593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2024] [Accepted: 11/25/2024] [Indexed: 12/25/2024]  Open
85
Zhang J, Shang J, Liu B, Zhu D, Li Q, Yin L, Ohore OE, Wen S, Ding C, Zhang Y, Yue Z, Zou Y. Hot spots of resistance: Transit centers as breeding grounds for airborne ARG-carrying bacteriophages. JOURNAL OF HAZARDOUS MATERIALS 2024;480:136165. [PMID: 39418908 DOI: 10.1016/j.jhazmat.2024.136165] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2024] [Revised: 09/15/2024] [Accepted: 10/12/2024] [Indexed: 10/19/2024]
86
Li Y, Zhang Y, Li A, Zhang T, Yi J, Zhang N, Kang X, Liu W, Tian S, Xia Q. Characterization of a novel lytic phage against methicillin resistance Staphylococcus aureus in Hainan island. Virology 2024;600:110264. [PMID: 39471608 DOI: 10.1016/j.virol.2024.110264] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2024] [Revised: 09/19/2024] [Accepted: 10/16/2024] [Indexed: 11/01/2024]
87
Wójcicki M, Shymialevich D, Średnicka P, Emanowicz P, Ostrowska A, Cieślak H, Sokołowska B. Phenotypic Characterization and Genome Analysis of New Broad-Spectrum Virulent Salmophage, Salmonella Phage KKP_3822, for Biocontrol of Multidrug-Resistant Salmonella enterica Strains. Int J Mol Sci 2024;25:12930. [PMID: 39684641 DOI: 10.3390/ijms252312930] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2024] [Revised: 11/30/2024] [Accepted: 11/30/2024] [Indexed: 12/18/2024]  Open
88
Rastegar S, Skurnik M, Niaz H, Tadjrobehkar O, Samareh A, Hosseini-Nave H, Sabouri S. Isolation, characterization, and potential application of Acinetobacter baumannii phages against extensively drug-resistant strains. Virus Genes 2024;60:725-736. [PMID: 39256307 DOI: 10.1007/s11262-024-02103-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2024] [Accepted: 08/15/2024] [Indexed: 09/12/2024]
89
Moon K, Song SH, Oh DJ, Park JG, Lee AH, Kwon M. Genome sequence data of Caudoviricetes bacteriophage MK21 infecting Xanthomonas citri, the causative agent of citrus canker. Data Brief 2024;57:110897. [PMID: 39314900 PMCID: PMC11418155 DOI: 10.1016/j.dib.2024.110897] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2024] [Revised: 08/26/2024] [Accepted: 08/27/2024] [Indexed: 09/25/2024]  Open
90
Wu Z, Liu S, Ni J. Metagenomic characterization of viruses and mobile genetic elements associated with the DPANN archaeal superphylum. Nat Microbiol 2024;9:3362-3375. [PMID: 39448846 DOI: 10.1038/s41564-024-01839-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2023] [Accepted: 09/25/2024] [Indexed: 10/26/2024]
91
Deng A, Wang J, Li L, Shi R, Li X, Wen T. Synoptic Variation Drives Genetic Diversity and Transmission Mode of Airborne DNA Viruses in Urban Space. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024;11:e2404512. [PMID: 39435753 PMCID: PMC11633480 DOI: 10.1002/advs.202404512] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Revised: 09/30/2024] [Indexed: 10/23/2024]
92
Mayne R, Aiewsakun P, Turner D, Adriaenssens E, Simmonds P. GRAViTy-V2: a grounded viral taxonomy application. NAR Genom Bioinform 2024;6:lqae183. [PMID: 39703433 PMCID: PMC11655284 DOI: 10.1093/nargab/lqae183] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2024] [Revised: 11/30/2024] [Accepted: 12/03/2024] [Indexed: 12/21/2024]  Open
93
Parra B, Sandoval M, Arriagada V, Amsteins L, Aguayo C, Opazo-Capurro A, Dechesne A, González-Rocha G. Isolation and Characterization of Lytic Bacteriophages Capable of Infecting Diverse Multidrug-Resistant Strains of Pseudomonas aeruginosa: PaCCP1 and PaCCP2. Pharmaceuticals (Basel) 2024;17:1616. [PMID: 39770458 PMCID: PMC11728774 DOI: 10.3390/ph17121616] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2024] [Revised: 11/26/2024] [Accepted: 11/27/2024] [Indexed: 01/16/2025]  Open
94
Cortes-Ortega E, Hansen EG, Iskender I, Farmer ML, Martinez-Villalobos JM, Vitt JD, Bowden SD. Isolation and characterization of Salmonella enterica- and Escherichia coli-specific bacteriophages of the genus Epseptimavirus from wastewater in Minnesota. Arch Virol 2024;169:255. [PMID: 39601978 DOI: 10.1007/s00705-024-06190-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2024] [Accepted: 11/12/2024] [Indexed: 11/29/2024]
95
Steiner LX, Schmittmann L, Rahn T, Lachnit T, Jahn MT, Hentschel U. Phage-induced disturbance of a marine sponge microbiome. ENVIRONMENTAL MICROBIOME 2024;19:97. [PMID: 39593141 PMCID: PMC11590407 DOI: 10.1186/s40793-024-00637-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2024] [Accepted: 11/07/2024] [Indexed: 11/28/2024]
96
Kornienko M, Bespiatykh D, Abdraimova N, Gorodnichev R, Gostev V, Boldyreva D, Selezneva O, Veselovsky V, Pobeguts O, Smirnov I, Arapidi G, Klimina K, Shitikov E. Multiomics analysis of Staphylococcus aureus ST239 strains resistant to virulent Herelleviridae phages. Sci Rep 2024;14:29375. [PMID: 39592862 PMCID: PMC11599779 DOI: 10.1038/s41598-024-80909-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2024] [Accepted: 11/22/2024] [Indexed: 11/28/2024]  Open
97
Chen H, Liu H, Gong Y, Dunstan RA, Ma Z, Zhou C, Zhao D, Tang M, Lithgow T, Zhou T. A Klebsiella-phage cocktail to broaden the host range and delay bacteriophage resistance both in vitro and in vivo. NPJ Biofilms Microbiomes 2024;10:127. [PMID: 39543151 PMCID: PMC11564825 DOI: 10.1038/s41522-024-00603-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2024] [Accepted: 11/05/2024] [Indexed: 11/17/2024]  Open
98
Lin W, Li D, Pan L, Li M, Tong Y. Cyanobacteria-cyanophage interactions between freshwater and marine ecosystems based on large-scale cyanophage genomic analysis. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;950:175201. [PMID: 39102952 DOI: 10.1016/j.scitotenv.2024.175201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2024] [Revised: 07/30/2024] [Accepted: 07/30/2024] [Indexed: 08/07/2024]
99
Biswas S, Tewari DN, Chakrabarti AK, Dutta S. Biological Characterization and Evaluation of the Therapeutic Value of Vibrio Phages 4141 and MJW Isolated from Clinical and Sewage Water Samples of Kolkata. Viruses 2024;16:1741. [PMID: 39599855 PMCID: PMC11598976 DOI: 10.3390/v16111741] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2024] [Revised: 10/28/2024] [Accepted: 10/30/2024] [Indexed: 11/29/2024]  Open
100
Li X, Cheng R, Zhang C, Shao Z. Genomic diversity of phages infecting the globally widespread genus Sulfurimonas. Commun Biol 2024;7:1428. [PMID: 39488617 PMCID: PMC11531552 DOI: 10.1038/s42003-024-07079-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2024] [Accepted: 10/15/2024] [Indexed: 11/04/2024]  Open
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