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Bi CQ, Kang T, Qian YK, Kang M, Zeng XH, Li LC. Upregulation of LHPP by saRNA inhibited hepatocellular cancer cell proliferation and xenograft tumor growth. PLoS One 2024; 19:e0299522. [PMID: 38696452 PMCID: PMC11065268 DOI: 10.1371/journal.pone.0299522] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Accepted: 02/13/2024] [Indexed: 05/04/2024] Open
Abstract
Hepatocellular carcinoma (HCC) is the most common primary liver cancer worldwide and no pharmacological treatment is available that can achieve complete remission of HCC. Phospholysine phosphohistidine inorganic pyrophosphate phosphatase (LHPP) is a recently identified HCC tumor suppressor gene which plays an important role in the development of HCC and its inactivation and reactivation has been shown to result in respectively HCC tumorigenesis and suppression. Small activating RNAs (saRNAs) have been used to achieve targeted activation of therapeutic genes for the restoration of their encoded protein through the RNAa mechanism. Here we designed and validated saRNAs that could activate LHPP expression at both the mRNA and protein levels in HCC cells. Activation of LHPP by its saRNAs led to the suppression of HCC proliferation, migration and the inhibition of Akt phosphorylation. When combined with targeted anticancer drugs (e.g., regorafenib), LHPP saRNA exhibited synergistic effect in inhibiting in vitro HCC proliferation and in vivo antitumor growth in a xenograft HCC model. Findings from this study provides further evidence for a tumor suppressor role of LHPP and potential therapeutic value of restoring the expression of LHPP by saRNA for the treatment of HCC.
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Affiliation(s)
- Chuan-Qian Bi
- Institute of Reproductive Medicine, School of Medicine, Nantong University, Nantong, Jiangsu, China
| | - Tao Kang
- Ractigen Therapeutics, Nantong, Jiangsu, China
| | - Yu-Kang Qian
- Institute of Reproductive Medicine, School of Medicine, Nantong University, Nantong, Jiangsu, China
| | - Moorim Kang
- Ractigen Therapeutics, Nantong, Jiangsu, China
| | - Xu-Hui Zeng
- Institute of Reproductive Medicine, School of Medicine, Nantong University, Nantong, Jiangsu, China
| | - Long-Cheng Li
- Institute of Reproductive Medicine, School of Medicine, Nantong University, Nantong, Jiangsu, China
- Ractigen Therapeutics, Nantong, Jiangsu, China
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2
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Zheng S, Zheng C, Chen S, Guo J, Huang L, Huang Z, Xu S, Wu Y, Li S, Lin J, You Y, Hu F. Structural and biochemical characterization of active sites mutant in human inorganic pyrophosphatase. Biochim Biophys Acta Gen Subj 2024; 1868:130594. [PMID: 38428647 DOI: 10.1016/j.bbagen.2024.130594] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 02/19/2024] [Accepted: 02/22/2024] [Indexed: 03/03/2024]
Abstract
Inorganic pyrophosphatases (PPases) are enzymes that catalyze the conversion of inorganic pyrophosphate (PPi) into phosphate (Pi). Human inorganic pyrophosphatase 1 (Hu-PPase) exhibits high expression levels in a variety of tumors and plays roles in cell proliferation, apoptosis, invasion and metastasis, making it a promising prognostic biomarker and a target for cancer therapy. Despite its widespread presence, the catalytic mechanism of Hu-PPase in humans remains inadequately understood. The signature motif amino acid sequence (DXDPXD) within the active sites of PPases is preserved across different species. In this research, an enzymatic activity assay revealed that mutations led to a notable reduction in enzymatic function, although the impact of the four amino acids on the activity of the pocket varied. To investigate the influence of these residues on the substrate binding and enzymatic function of PPase, the crystal structure of the Hu-PPase-ED quadruple mutant (D116A/D118A/P119A/D121A) was determined at 1.69 Å resolution. The resulting structure maintained a barrel-like shape similar to that of the wild-type, albeit lacking Mg2+ ions. Molecular docking analysis demonstrated a decreased ability of Hu-PPase-ED to bind to PPi. Further, molecular dynamics simulation analysis indicated that the mutation rendered the loop of Mg2+ ion-binding residues less stable. Therefore, the effect on enzyme activity did not result from a change in the gross protein structure but rather from a mutation that abolished the Mg2+-coordinating groups, thereby eliminating Mg2+ binding and leading to the loss of enzyme activity.
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Affiliation(s)
- Shuping Zheng
- Public Technology Service Center, Fujian Medical University, Fuzhou, China
| | - Chenhua Zheng
- Experiment Teaching Center of Basic Medical Sciences, School of Basic Medical Sciences, Fujian Medical University, Fuzhou, China
| | - Sishi Chen
- Public Technology Service Center, Fujian Medical University, Fuzhou, China
| | - Jianpeng Guo
- Department of Pharmacology, School of Pharmacy, Fujian Medical University, Fuzhou, China; Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, Fujian Medical University, Fuzhou, China
| | - Lirui Huang
- Key Laboratory of Gastrointestinal Cancer (Fujian Medical University), Ministry of Education, School of Basic Medical Sciences, Fujian Medical University, Fuzhou, China
| | - Zhenhong Huang
- Key Laboratory of Gastrointestinal Cancer (Fujian Medical University), Ministry of Education, School of Basic Medical Sciences, Fujian Medical University, Fuzhou, China
| | - Sunting Xu
- Key Laboratory of Gastrointestinal Cancer (Fujian Medical University), Ministry of Education, School of Basic Medical Sciences, Fujian Medical University, Fuzhou, China
| | - Yihan Wu
- Key Laboratory of Gastrointestinal Cancer (Fujian Medical University), Ministry of Education, School of Basic Medical Sciences, Fujian Medical University, Fuzhou, China
| | - Shunfa Li
- Key Laboratory of Gastrointestinal Cancer (Fujian Medical University), Ministry of Education, School of Basic Medical Sciences, Fujian Medical University, Fuzhou, China
| | - Junjin Lin
- Public Technology Service Center, Fujian Medical University, Fuzhou, China
| | - Yiqing You
- Key Laboratory of Diagnostic Medicine Designated by the Chinese Ministry of Education, Chongqing Medical University, Chongqing, China
| | - Fen Hu
- Key Laboratory of Gastrointestinal Cancer (Fujian Medical University), Ministry of Education, School of Basic Medical Sciences, Fujian Medical University, Fuzhou, China.
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Lian B, Wu A, Wu H, Lv X, Sun M, Li Y, Lu Z, Li S, An L, Guo X, Wei F, Fu X, Lu J, Wang H, Ma L, Wei H, Yu S. GhVOZ1-AVP1 module positively regulates salt tolerance in upland cotton (Gossypium hirsutum L.). Int J Biol Macromol 2024; 258:129116. [PMID: 38171192 DOI: 10.1016/j.ijbiomac.2023.129116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 12/25/2023] [Accepted: 12/26/2023] [Indexed: 01/05/2024]
Abstract
Vascular Plant One‑zinc Finger (VOZ) transcription factor can respond to a variety of abiotic stresses, however its function in cotton and the molecular mechanisms of response to salt tolerance remained unclear. In this study, we found that GhVOZ1 is highly expressed in stamen and stem of cotton under normal conditions. The expression of GhVOZ1 increased significantly after 3 h of salt treatment in three-leaf staged upland cotton. Overexpressed transgenic lines of GhVOZ1 in Arabidopsis and upland cotton were treated with salt stress and we found that GhVOZ1 could respond positively to salt stress. GhVOZ1 can regulate Arabidopsis Vacuolar Proton Pump Pyrophosphatase (H+-PPase) gene (AVP1) expression through specific binding to GCGTCTAAAGTACGC site on GhAVP1 promoter, which was examined through Dual-luciferase assay and Electrophoretic mobility shift assay (EMSA). AVP1 expression was significantly increased in Arabidopsis with GhVOZ1 overexpression, while GhAVP1 expression was decreased in virus induced gene silenced (VIGS) cotton plants of GhVOZ1. Knockdown of GhAVP1 expression in cotton plants by VIGS showed decreased superoxide dismutase (SOD) and peroxidase (POD) activities, whereas an increased malondialdehyde (MDA) content and ultimately decreased salt tolerance. The GhVOZ1-AVP1 module could maintain sodium ion homeostasis through cell ion transport and positively regulate the salt tolerance in cotton, providing new ideas and insights for the study of salt tolerance.
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Affiliation(s)
- Boying Lian
- College of Agronomy, Northwest A&F University, Yangling 712100, Shannxi, China
| | - Aimin Wu
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, Henan, China
| | - Hongmei Wu
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, Henan, China
| | - Xiaoyan Lv
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, Henan, China
| | - Mengxi Sun
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, Henan, China
| | - Yiran Li
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, Henan, China
| | - Zhengying Lu
- Handan Academy of Agricultural Sciences, Handan 056000, Hebei, China
| | - Shiyun Li
- Handan Academy of Agricultural Sciences, Handan 056000, Hebei, China
| | - Li An
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, Henan, China
| | - Xiaohao Guo
- College of Agronomy, Northwest A&F University, Yangling 712100, Shannxi, China
| | - Fei Wei
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, Henan, China
| | - Xiaokang Fu
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, Henan, China
| | - Jianhua Lu
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, Henan, China
| | - Hantao Wang
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, Henan, China
| | - Liang Ma
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, Henan, China
| | - Hengling Wei
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, Henan, China.
| | - Shuxun Yu
- College of Agronomy, Northwest A&F University, Yangling 712100, Shannxi, China.
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Graham S, Peterson DC, James C. Alcohol-Induced Sudden Cardiac Death in a Teenager With PPA2 Gene Mutations. Am J Forensic Med Pathol 2023; 44:332-335. [PMID: 37249496 DOI: 10.1097/paf.0000000000000841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
ABSTRACT The PPA2 gene encodes a mitochondrial pyrophosphatase protein. Mutations in the gene are inherited in an autosomal recessive fashion and, when mutated, function to induce mitochondrial ATP production failure resulting in increased stress on the heart and sudden cardiac death, especially when combined with alcohol. Herein, we describe a case of a 19-year-old female patient with a history of "alcohol intolerance" who was found unexpectedly deceased after consuming a minimal amount of alcohol. Histological examination of her heart revealed widespread fibrosis of the left ventricle and the interventricular septum. Other findings include hypertrophied myocytes, including some with pleomorphic nuclei. Genetic studies were performed on postmortem blood, revealing heterozygous PPA2 gene mutations, the pathogenic variant c.683C>T (p.Pro228Leu), and the other variant c.814C>T (p.His272Tyr), a novel variant of undetermined significance. We propose that the variant of undetermined significance is likely a pathogenic mutation due to the decedent's phenotype.
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Affiliation(s)
- Sydney Graham
- From the Arkansas College of Osteopathic Medicine, Fort Smith, AR
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5
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Moorefield J, Konuk Y, Norman JO, Abendroth J, Edwards TE, Lorimer DD, Mayclin SJ, Staker BL, Craig JK, Barett KF, Barrett LK, Van Voorhis WC, Myler PJ, McLaughlin KJ. Characterization of a family I inorganic pyrophosphatase from Legionella pneumophila Philadelphia 1. Acta Crystallogr F Struct Biol Commun 2023; 79:257-266. [PMID: 37728609 PMCID: PMC10565794 DOI: 10.1107/s2053230x23008002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Accepted: 09/13/2023] [Indexed: 09/21/2023] Open
Abstract
Inorganic pyrophosphate (PPi) is generated as an intermediate or byproduct of many fundamental metabolic pathways, including DNA/RNA synthesis. The intracellular concentration of PPi must be regulated as buildup can inhibit many critical cellular processes. Inorganic pyrophosphatases (PPases) hydrolyze PPi into two orthophosphates (Pi), preventing the toxic accumulation of the PPi byproduct in cells and making Pi available for use in biosynthetic pathways. Here, the crystal structure of a family I inorganic pyrophosphatase from Legionella pneumophila is reported at 2.0 Å resolution. L. pneumophila PPase (LpPPase) adopts a homohexameric assembly and shares the oligonucleotide/oligosaccharide-binding (OB) β-barrel core fold common to many other bacterial family I PPases. LpPPase demonstrated hydrolytic activity against a general substrate, with Mg2+ being the preferred metal cofactor for catalysis. Legionnaires' disease is a severe respiratory infection caused primarily by L. pneumophila, and thus increased characterization of the L. pneumophila proteome is of interest.
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Affiliation(s)
- Julia Moorefield
- Department of Chemistry, Vassar College, 124 Raymond Avenue, Poughkeepsie, NY 12604, USA
| | - Yagmur Konuk
- Department of Chemistry, Vassar College, 124 Raymond Avenue, Poughkeepsie, NY 12604, USA
| | - Jordan O. Norman
- Department of Chemistry, Vassar College, 124 Raymond Avenue, Poughkeepsie, NY 12604, USA
| | - Jan Abendroth
- Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
- UCB Biosciences, 7869 Day Road West, Bainbridge Island, WA 98110, USA
| | - Thomas E. Edwards
- Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
- UCB Biosciences, 7869 Day Road West, Bainbridge Island, WA 98110, USA
| | - Donald D. Lorimer
- Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
- UCB Biosciences, 7869 Day Road West, Bainbridge Island, WA 98110, USA
| | - Stephen J. Mayclin
- Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
- UCB Biosciences, 7869 Day Road West, Bainbridge Island, WA 98110, USA
| | - Bart L. Staker
- Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
- Seattle Children’s Research Institute, University of Washington, Seattle, Washington, USA
| | - Justin K. Craig
- Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
- Division of Allergy and Infectious Diseases, Center for Emerging and Re-emerging Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
| | - Kayleigh F. Barett
- Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
- Division of Allergy and Infectious Diseases, Center for Emerging and Re-emerging Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
| | - Lynn K. Barrett
- Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
- Division of Allergy and Infectious Diseases, Center for Emerging and Re-emerging Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
| | - Wesley C. Van Voorhis
- Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
- Division of Allergy and Infectious Diseases, Center for Emerging and Re-emerging Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
| | - Peter J. Myler
- Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
- Seattle Children’s Research Institute, University of Washington, Seattle, Washington, USA
| | - Krystle J. McLaughlin
- Department of Chemistry, Vassar College, 124 Raymond Avenue, Poughkeepsie, NY 12604, USA
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6
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Gann PJI, Dharwadker D, Cherati SR, Vinzant K, Khodakovskaya M, Srivastava V. Targeted mutagenesis of the vacuolar H + translocating pyrophosphatase gene reduces grain chalkiness in rice. Plant J 2023; 115:1261-1276. [PMID: 37256847 DOI: 10.1111/tpj.16317] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Revised: 05/12/2023] [Accepted: 05/18/2023] [Indexed: 06/02/2023]
Abstract
Grain chalkiness is a major concern in rice production because it impacts milling yield and cooking quality, eventually reducing market value of the rice. A gene encoding vacuolar H+ translocating pyrophosphatase (V-PPase) is a major quantitative trait locus in indica rice, controlling grain chalkiness. Higher transcriptional activity of this gene is associated with increased chalk content. However, whether the suppression of V-PPase could reduce chalkiness is not clear. Furthermore, natural variation in the chalkiness of japonica rice has not been linked with V-PPase. Here, we describe promoter targeting of the japonica V-PPase allele that led to reduced grain chalkiness and the development of more translucent grains. Disruption of a putative GATA element by clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein 9 suppressed V-PPase activity, reduced grain chalkiness and impacted post-germination growth that could be rescued by the exogenous supply of sucrose. The mature grains of the targeted lines showed a much lower percentage of large or medium chalk. Interestingly, the targeted lines developed a significantly lower chalk under heat stress, a major inducer of grain chalk. Metabolomic analysis showed that pathways related to starch and sugar metabolism were affected in the developing grains of the targeted lines that correlated with higher inorganic pyrophosphate and starch contents and upregulation of starch biosynthesis genes. In summary, we show a biotechnology approach of reducing grain chalkiness in rice by downregulating the transcriptional activity of V-PPase that presumably leads to altered metabolic rates, including starch biosynthesis, resulting in more compact packing of starch granules and formation of translucent rice grains.
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Affiliation(s)
- Peter James Icalia Gann
- Cell and Molecular Biology Program, University of Arkansas, 115 Plant Science Building, Fayetteville, AR, 72701, USA
- Department of Crop, Soil and Environmental Sciences, University of Arkansas Division of Agriculture, 115 Plant Science Building, Fayetteville, AR, 72701, USA
| | - Dominic Dharwadker
- Department of Chemistry and Biochemistry, University of Arkansas, 119 Chemistry Building, Fayetteville, West Maple Street, AR, 72701, USA
| | - Sajedeh Rezaei Cherati
- Department of Biology, University of Arkansas Little Rock, 2801 S University Avenue, Little Rock, AR, 727704, USA
| | - Kari Vinzant
- Department of Biology, University of Arkansas Little Rock, 2801 S University Avenue, Little Rock, AR, 727704, USA
| | - Mariya Khodakovskaya
- Department of Biology, University of Arkansas Little Rock, 2801 S University Avenue, Little Rock, AR, 727704, USA
| | - Vibha Srivastava
- Cell and Molecular Biology Program, University of Arkansas, 115 Plant Science Building, Fayetteville, AR, 72701, USA
- Department of Crop, Soil and Environmental Sciences, University of Arkansas Division of Agriculture, 115 Plant Science Building, Fayetteville, AR, 72701, USA
- Department of Horticulture, University of Arkansas Division of Agriculture, 315 Plant Science Building, Fayetteville, AR, 72701, USA
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7
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Tang C, Wang P, Zhu X, Qi K, Xie Z, Zhang H, Li X, Gao H, Gu T, Gu C, Li S, de Graaf BHJ, Zhang S, Wu J. Acetylation of inorganic pyrophosphatase by S-RNase signaling induces pollen tube tip swelling by repressing pectin methylesterase. Plant Cell 2023; 35:3544-3565. [PMID: 37306489 PMCID: PMC10473231 DOI: 10.1093/plcell/koad162] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2023] [Revised: 05/19/2023] [Accepted: 06/01/2023] [Indexed: 06/13/2023]
Abstract
Self-incompatibility (SI) is a widespread genetically determined system in flowering plants that prevents self-fertilization to promote gene flow and limit inbreeding. S-RNase-based SI is characterized by the arrest of pollen tube growth through the pistil. Arrested pollen tubes show disrupted polarized growth and swollen tips, but the underlying molecular mechanism is largely unknown. Here, we demonstrate that the swelling at the tips of incompatible pollen tubes in pear (Pyrus bretschneideri [Pbr]) is mediated by the SI-induced acetylation of the soluble inorganic pyrophosphatase (PPA) PbrPPA5. Acetylation at Lys-42 of PbrPPA5 by the acetyltransferase GCN5-related N-acetyltransferase 1 (GNAT1) drives accumulation of PbrPPA5 in the nucleus, where it binds to the transcription factor PbrbZIP77, forming a transcriptional repression complex that inhibits the expression of the pectin methylesterase (PME) gene PbrPME44. The function of PbrPPA5 as a transcriptional repressor does not require its PPA activity. Downregulating PbrPME44 resulted in increased levels of methyl-esterified pectins in growing pollen tubes, leading to swelling at their tips. These observations suggest a mechanism for PbrPPA5-driven swelling at the tips of pollen tubes during the SI response. The targets of PbrPPA5 include genes encoding cell wall-modifying enzymes, which are essential for building a continuous sustainable mechanical structure for pollen tube growth.
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Affiliation(s)
- Chao Tang
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
- Jiangsu Engineering Research Center for Pear, Nanjing Agricultural University, Nanjing 210014, China
| | - Peng Wang
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
- Jiangsu Engineering Research Center for Pear, Nanjing Agricultural University, Nanjing 210014, China
| | - Xiaoxuan Zhu
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
- Jiangsu Engineering Research Center for Pear, Nanjing Agricultural University, Nanjing 210014, China
| | - Kaijie Qi
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
- Jiangsu Engineering Research Center for Pear, Nanjing Agricultural University, Nanjing 210014, China
| | - Zhihua Xie
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
- Jiangsu Engineering Research Center for Pear, Nanjing Agricultural University, Nanjing 210014, China
| | - Hao Zhang
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
- Jiangsu Engineering Research Center for Pear, Nanjing Agricultural University, Nanjing 210014, China
| | - Xiaoqiang Li
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
- Jiangsu Engineering Research Center for Pear, Nanjing Agricultural University, Nanjing 210014, China
| | - Hongru Gao
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
- Jiangsu Engineering Research Center for Pear, Nanjing Agricultural University, Nanjing 210014, China
| | - Tingting Gu
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
| | - Chao Gu
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
- Jiangsu Engineering Research Center for Pear, Nanjing Agricultural University, Nanjing 210014, China
| | - Shan Li
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
| | | | - Shaoling Zhang
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
- Jiangsu Engineering Research Center for Pear, Nanjing Agricultural University, Nanjing 210014, China
| | - Juyou Wu
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing 210095, China
- Jiangsu Engineering Research Center for Pear, Nanjing Agricultural University, Nanjing 210014, China
- Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
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8
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Manzanilla-Romero HH, Schermer E, Mayr A, Rudnik-Schöneborn S. Only one beer can be mortal: a case report of two sisters with cardiac arrest due to a homozygous mutation in PPA2 gene. Eur J Pediatr 2023; 182:3785-3788. [PMID: 37269378 PMCID: PMC10460352 DOI: 10.1007/s00431-023-05034-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Revised: 03/31/2023] [Accepted: 05/19/2023] [Indexed: 06/05/2023]
Abstract
We report the long way to the correct diagnosis in two teenage sisters who developed a cardiac arrest after consuming minimal amounts of alcohol. The older girl dramatically survived two cardiac arrests at the age of 14 and 15 years. She underwent an extensive examination that revealed isolated cardiac abnormalities including fibrosis, dilated cardiomyopathy and inflammation. The younger girl also had a cardiac arrest at the age of 15 and died suddenly after consuming 1-2 beers, 3 years after her sister´s first incident. Autopsy of the heart revealed acute myocarditis without structural alterations. Multigene panel analysis (not including PPA2) showed SCN5A and CACNA1D variants in both sisters and their healthy mother. Six years later duo exome allowed the diagnosis of an autosomal recessive PPA2-related mitochondriopathy. We discuss the molecular results and clinical picture of our patients compared to other PPA2-related cases. We highlight the diagnostic contribution of multigene panels and exome analysis. The genetic diagnosis is important for medical care and for everyday life, specifically because alcohol intake can result in cardiac arrest and should be strictly avoided. Conclusion: Duo exome sequencing clarified the diagnosis of PPA2-related mitochondriopathy in two sisters with isolated cardiac features and sudden cardiac arrest triggered by minimal amounts of alcohol. What is Known: • Multigene-Panel or exome analysis is a valuable tool to identify genetic causes of hereditary cardiac arrhythmias. • Variants of unknown significance can lead to misinterpretation. PPA2-related mitochondriopathy is a very rare autosomal recessive condition that is normally fatal in infancy. What is New: • Duo exome analysis in two teeenage sisters with cardiac arrest revealed a homozygous mild PPA2 mutation as the underlying pathology restricted to the heart muscle.
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Affiliation(s)
| | - Elisabeth Schermer
- Pediatrics III (Cardiopulmonary Unit), Medical University of Innsbruck, Innsbruck, Austria
| | - Agnes Mayr
- Clinic of Radiology, Medical University of Innsbruck, Innsbruck, Austria
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9
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Li Y, Yang X, Gao R. Thermophilic Inorganic Pyrophosphatase Ton1914 from Thermococcus onnurineus NA1 Removes the Inhibitory Effect of Pyrophosphate. Int J Mol Sci 2022; 23:ijms232112735. [PMID: 36361526 PMCID: PMC9653972 DOI: 10.3390/ijms232112735] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2022] [Revised: 10/10/2022] [Accepted: 10/21/2022] [Indexed: 01/25/2023] Open
Abstract
Pyrophosphate (PPi) is a byproduct of over 120 biosynthetic reactions, and an overabundance of PPi can inhibit industrial synthesis. Pyrophosphatases (PPases) can effectively hydrolyze pyrophosphate to remove the inhibitory effect of pyrophosphate. In the present work, a thermophilic alkaline inorganic pyrophosphatase from Thermococcus onnurineus NA1 was studied. The optimum pH and temperature of Ton1914 were 9.0 and 80 °C, respectively, and the half-life was 52 h at 70 °C and 2.5 h at 90 °C. Ton1914 showed excellent thermal stability, and its relative enzyme activity, when incubated in Tris-HCl 9.0 containing 1.6 mM Mg2+ at 90 °C for 5 h, was still 100%, which was much higher than the control, whose relative activity was only 37%. Real-time quantitative PCR (qPCR) results showed that the promotion of Ton1914 on long-chain DNA was more efficient than that on short-chain DNA when the same concentration of templates was supplemented. The yield of long-chain products was increased by 32-41%, while that of short-chain DNA was only improved by 9.5-15%. Ton1914 also increased the yields of UDP-glucose and UDP-galactose enzymatic synthesis from 40.1% to 84.8% and 20.9% to 35.4%, respectively. These findings suggested that Ton1914 has considerable potential for industrial applications.
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Affiliation(s)
| | | | - Renjun Gao
- Correspondence: ; Tel.: +86-186-0431-3058
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10
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Tersteeg S, Mrozowich T, Henrickson A, Demeler B, Patel TR. Purification and characterization of inorganic pyrophosphatase for in vitro RNA transcription. Biochem Cell Biol 2022; 100:425-436. [PMID: 35926232 PMCID: PMC10311840 DOI: 10.1139/bcb-2022-0118] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Inorganic pyrophosphatase (iPPase) is an enzyme that cleaves pyrophosphate into two phosphate molecules. This enzyme is an essential component of in vitro transcription (IVT) reactions for RNA preparation as it prevents pyrophosphate from precipitating with magnesium, ultimately increasing the rate of the IVT reaction. Large-scale RNA production is often required for biochemical and biophysical characterization studies of RNA, therefore requiring large amounts of IVT reagents. Commercially purchased iPPase is often the most expensive component of any IVT reaction. In this paper, we demonstrate that iPPase can be produced in large quantities and high quality using a reasonably generic laboratory facility and that laboratory-purified iPPase is as effective as commercially available iPPase. Furthermore, using size exclusion chromatography coupled with multi-angle light scattering and dynamic light scattering, analytical ultracentrifugation, and small-angle X-ray scattering, we demonstrate that yeast iPPase can form tetramers and hexamers in solution as well as the enzymatically active dimer. Our work provides a robust protocol for laboratories involved with RNA in vitro transcription to efficiently produce active iPPase, significantly reducing the financial strain of large-scale RNA production.
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Affiliation(s)
- Scott Tersteeg
- Department of Chemistry and Biochemistry, Alberta RNA Research and Training Institute, University of Lethbridge, 4401 University Drive, Lethbridge, AB T1K 3M4, Canada
| | - Tyler Mrozowich
- Department of Chemistry and Biochemistry, Alberta RNA Research and Training Institute, University of Lethbridge, 4401 University Drive, Lethbridge, AB T1K 3M4, Canada
| | - Amy Henrickson
- Department of Chemistry and Biochemistry, Alberta RNA Research and Training Institute, University of Lethbridge, 4401 University Drive, Lethbridge, AB T1K 3M4, Canada
| | - Borries Demeler
- Department of Chemistry and Biochemistry, Alberta RNA Research and Training Institute, University of Lethbridge, 4401 University Drive, Lethbridge, AB T1K 3M4, Canada
- Department of Chemistry and Biochemistry, University of Montana, Missoula, MT 59812, USA
| | - Trushar R. Patel
- Department of Chemistry and Biochemistry, Alberta RNA Research and Training Institute, University of Lethbridge, 4401 University Drive, Lethbridge, AB T1K 3M4, Canada
- Li Ka Shing Institute of Virology, University of Alberta, Edmonton, AB T6G 2E1, Canada
- Department of Microbiology, Immunology & Infectious Diseases, Cumming School of Medicine, University of Calgary, Calgary, AB T2N 4N1, Canada
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11
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Oliver EB, Friesen JD, Walker JA, Peters SJ, Weitzel CS, Friesen JA. Characterization of an archaeal inorganic pyrophosphatase from Sulfolobus islandicus using a [ 31P]-NMR-based assay. Biochem Biophys Res Commun 2021; 585:8-14. [PMID: 34781059 DOI: 10.1016/j.bbrc.2021.11.019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Accepted: 11/04/2021] [Indexed: 11/17/2022]
Abstract
Inorganic pyrophosphatase catalyzes the conversion of pyrophosphate to phosphate and is often critical for driving reactions forward in cellular processes such as nucleic acid and protein synthesis. Commonly used methods for quantifying pyrophosphatase enzyme activity employ reacting liberated phosphate with a second molecule to produce absorbance changes or employing a second enzyme in coupled reactions to produce a product with a detectable absorbance. In this investigation, a novel [31P]-NMR spectroscopy-based assay was used to quantitatively measure the formation of phosphate and evaluate the activity of inorganic pyrophosphatase from the thermoacidophilic Crenarchaeota Sulfolobus islandicus. The enzymatic activity was directly measured via integration of the [31P] resonance associated with the phosphate product (δ = 2.1 ppm). Sulfolobus islandicus inorganic pyrophosphatase preferentially utilized Mg2+ as divalent cation and had pH and temperature optimums of 6.0 of 50 °C, respectively. The Vmax value was 850 μmol/min/mg and the Km for pyrophosphate was 1.02 mM. Sequence analysis indicates the enzyme is a Family I pyrophosphatase. Sulfolobus islandicus inorganic pyrophosphatase was shown to be inhibited by sodium fluoride with a IC50 of 2.26 mM, compared to a IC50 of 0.066 mM for yeast inorganic pyrophosphatase. These studies reveal that a [31P]-NMR spectroscopy-based assay is an effective method for analyzing catalysis by phosphate-producing enzymes.
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Affiliation(s)
- Ethan B Oliver
- Department of Chemistry, Illinois State University, Normal, IL, 61790, USA
| | - Joshua D Friesen
- Department of Chemistry, Illinois State University, Normal, IL, 61790, USA
| | - Jacob A Walker
- Department of Chemistry, Illinois State University, Normal, IL, 61790, USA
| | - Steven J Peters
- Department of Chemistry, Illinois State University, Normal, IL, 61790, USA
| | | | - Jon A Friesen
- Department of Chemistry, Illinois State University, Normal, IL, 61790, USA.
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12
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Tabeta H, Watanabe S, Fukuda K, Gunji S, Asaoka M, Hirai MY, Seo M, Tsukaya H, Ferjani A. An auxin signaling network translates low-sugar-state input into compensated cell enlargement in the fugu5 cotyledon. PLoS Genet 2021; 17:e1009674. [PMID: 34351899 PMCID: PMC8341479 DOI: 10.1371/journal.pgen.1009674] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2021] [Accepted: 06/18/2021] [Indexed: 01/29/2023] Open
Abstract
In plants, the effective mobilization of seed nutrient reserves is crucial during germination and for seedling establishment. The Arabidopsis H+-PPase-loss-of-function fugu5 mutants exhibit a reduced number of cells in the cotyledons. This leads to enhanced post-mitotic cell expansion, also known as compensated cell enlargement (CCE). While decreased cell numbers have been ascribed to reduced gluconeogenesis from triacylglycerol, the molecular mechanisms underlying CCE remain ill-known. Given the role of indole 3-butyric acid (IBA) in cotyledon development, and because CCE in fugu5 is specifically and completely cancelled by ech2, which shows defective IBA-to-indoleacetic acid (IAA) conversion, IBA has emerged as a potential regulator of CCE. Here, to further illuminate the regulatory role of IBA in CCE, we used a series of high-order mutants that harbored a specific defect in IBA-to-IAA conversion, IBA efflux, IAA signaling, or vacuolar type H+-ATPase (V-ATPase) activity and analyzed the genetic interaction with fugu5-1. We found that while CCE in fugu5 was promoted by IBA, defects in IBA-to-IAA conversion, IAA response, or the V-ATPase activity alone cancelled CCE. Consistently, endogenous IAA in fugu5 reached a level 2.2-fold higher than the WT in 1-week-old seedlings. Finally, the above findings were validated in icl-2, mls-2, pck1-2 and ibr10 mutants, in which CCE was triggered by low sugar contents. This provides a scenario in which following seed germination, the low-sugar-state triggers IAA synthesis, leading to CCE through the activation of the V-ATPase. These findings illustrate how fine-tuning cell and organ size regulation depend on interplays between metabolism and IAA levels in plants.
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Affiliation(s)
- Hiromitsu Tabeta
- Department of Biology, Tokyo Gakugei University, Koganei-shi, Tokyo, Japan
- RIKEN Center for Sustainable Resource Science, Yokohama, Japan
- Department of Life Sciences, Graduate School of Arts and Sciences, The University of Tokyo, Komaba, Meguro-ku, Tokyo, Japan
| | | | - Keita Fukuda
- Department of Biology, Tokyo Gakugei University, Koganei-shi, Tokyo, Japan
| | - Shizuka Gunji
- Department of Biology, Tokyo Gakugei University, Koganei-shi, Tokyo, Japan
| | - Mariko Asaoka
- Department of Biology, Tokyo Gakugei University, Koganei-shi, Tokyo, Japan
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, UCB Lyon 1, ENS de Lyon, INRA, CNRS, Lyon, France
| | | | - Mitsunori Seo
- RIKEN Center for Sustainable Resource Science, Yokohama, Japan
| | - Hirokazu Tsukaya
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan
| | - Ali Ferjani
- Department of Biology, Tokyo Gakugei University, Koganei-shi, Tokyo, Japan
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Yin Y, Wu Y, Zhang X, Zhu Y, Sun Y, Yu J, Gong Y, Sun P, Lin H, Han X. PPA1 Regulates Systemic Insulin Sensitivity by Maintaining Adipocyte Mitochondria Function as a Novel PPARγ Target Gene. Diabetes 2021; 70:1278-1291. [PMID: 33722839 DOI: 10.2337/db20-0622] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Accepted: 02/28/2021] [Indexed: 11/13/2022]
Abstract
Downregulation of mitochondrial function in adipose tissue is considered as one important driver for the development of obesity-associated metabolic disorders. Inorganic pyrophosphatase 1 (PPA1) is an enzyme that catalyzes the hydrolysis of inorganic pyrophosphate to inorganic phosphate and is required for anabolism to take place in cells. Although alteration of PPA1 has been related to some diseases, the importance of PPA1 in metabolic syndromes has never been discussed. In this study, we found that global PPA1 knockout mice (PPA1+/-) showed impaired glucose tolerance and severe insulin resistance under high-fat-diet feeding. In addition, impaired adipose tissue development and ectopic lipid accumulation were observed. Conversely, overexpression of PPA1 in adipose tissue by adeno-associated virus injection can partly reverse the metabolic disorders in PPA1+/- mice, suggesting that impaired adipose tissue function is responsible for the metabolic disorders observed in PPA1+/- mice. Mechanistic studies revealed that PPA1 acted as a PPARγ target gene to maintain mitochondrial function in adipocytes. Furthermore, specific knockdown of PPA1 in fat body of Drosophila led to impaired mitochondria morphology, decreased lipid storage, and made Drosophila more sensitive to starvation. In conclusion, for the first time, our findings demonstrate the importance of PPA1 in maintaining adipose tissue function and whole-body metabolic homeostasis.
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Affiliation(s)
- Ye Yin
- Key Laboratory of Human Functional Genomics of Jiangsu Province, Department of Biochemistry and Molecular Biology, Nanjing Medical University, Nanjing, Jiangsu, China
| | - Yangyang Wu
- Key Laboratory of Human Functional Genomics of Jiangsu Province, Department of Biochemistry and Molecular Biology, Nanjing Medical University, Nanjing, Jiangsu, China
| | - Xu Zhang
- Key Laboratory of Human Functional Genomics of Jiangsu Province, Department of Biochemistry and Molecular Biology, Nanjing Medical University, Nanjing, Jiangsu, China
| | - Yeting Zhu
- Key Laboratory of Human Functional Genomics of Jiangsu Province, Department of Biochemistry and Molecular Biology, Nanjing Medical University, Nanjing, Jiangsu, China
| | - Yue Sun
- Key Laboratory of Human Functional Genomics of Jiangsu Province, Department of Biochemistry and Molecular Biology, Nanjing Medical University, Nanjing, Jiangsu, China
| | - Jiani Yu
- Key Laboratory of Human Functional Genomics of Jiangsu Province, Department of Biochemistry and Molecular Biology, Nanjing Medical University, Nanjing, Jiangsu, China
| | - Yufei Gong
- Key Laboratory of Human Functional Genomics of Jiangsu Province, Department of Biochemistry and Molecular Biology, Nanjing Medical University, Nanjing, Jiangsu, China
| | - Peng Sun
- Key Laboratory of Human Functional Genomics of Jiangsu Province, Department of Biochemistry and Molecular Biology, Nanjing Medical University, Nanjing, Jiangsu, China
| | - Haiyan Lin
- Key Laboratory of Human Functional Genomics of Jiangsu Province, Department of Biochemistry and Molecular Biology, Nanjing Medical University, Nanjing, Jiangsu, China
| | - Xiao Han
- Key Laboratory of Human Functional Genomics of Jiangsu Province, Department of Biochemistry and Molecular Biology, Nanjing Medical University, Nanjing, Jiangsu, China
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14
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Hussain SB, Shi CY, Guo LX, Du W, Bai YX, Kamran HM, Fernie AR, Liu YZ. Type I H+-pyrophosphatase regulates the vacuolar storage of sucrose in citrus fruit. J Exp Bot 2020; 71:5935-5947. [PMID: 32589717 DOI: 10.1093/jxb/eraa298] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2020] [Accepted: 06/19/2020] [Indexed: 06/11/2023]
Abstract
The aim of this work was to evaluate the general role of the vacuolar pyrophosphatase proton pump (V-PPase) in sucrose accumulation in citrus species. First, three citrus V-PPase genes, designated CsVPP-1, CsVPP-2, and CsVPP-4, were identified in the citrus genome. CsVPP-1 and CsVPP-2 belonging to citrus type I V-PPase genes are targeted to the tonoplast, and CsVPP-4 belonging to citrus type II V-PPase genes is located in the Golgi bodies. Moreover, there was a significantly positive correlation between transcript levels of type I V-PPase genes and sucrose, rather than hexose, content in fruits of seven citrus cultivars. Drought and abscisic acid treatments significantly induced the CsVPP-1 and CsVPP-2 transcript levels, as well as the sucrose content. The overexpression of type I V-PPase genes significantly increased PPase activity, decreased pyrophosphate contents, and increased sucrose contents, whereas V-PPase inhibition produced the opposite effect in both citrus fruits and leaves. Furthermore, altering the expression levels of type I V-PPase genes significantly influenced the transcript levels of sucrose transporter genes. Taken together, this study demonstrated that CsVPP-1 and CsVPP-2 play key roles in sucrose storage in the vacuole by regulating pyrophosphate homeostasis, ultimately the sucrose biosynthesis and transcript levels of sucrose transport genes, providing a novel lead for engineering or breeding modified taste in citrus and other fruits.
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Affiliation(s)
- Syed Bilal Hussain
- Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University, Wuhan, PR China
- College of Horticulture & Forestry Sciences, Huazhong Agricultural University, Wuhan, PR China
| | - Cai-Yun Shi
- Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University, Wuhan, PR China
- College of Horticulture & Forestry Sciences, Huazhong Agricultural University, Wuhan, PR China
| | - Ling-Xia Guo
- Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University, Wuhan, PR China
- College of Horticulture & Forestry Sciences, Huazhong Agricultural University, Wuhan, PR China
| | - Wei Du
- Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University, Wuhan, PR China
- College of Horticulture & Forestry Sciences, Huazhong Agricultural University, Wuhan, PR China
| | - Ying-Xing Bai
- Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University, Wuhan, PR China
- College of Horticulture & Forestry Sciences, Huazhong Agricultural University, Wuhan, PR China
| | - Hafiz Muhammad Kamran
- Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University, Wuhan, PR China
- College of Horticulture & Forestry Sciences, Huazhong Agricultural University, Wuhan, PR China
| | - Alisdair R Fernie
- Max-Planck-Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
| | - Yong-Zhong Liu
- Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University, Wuhan, PR China
- College of Horticulture & Forestry Sciences, Huazhong Agricultural University, Wuhan, PR China
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15
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Saade S, Brien C, Pailles Y, Berger B, Shahid M, Russell J, Waugh R, Negrão S, Tester M. Dissecting new genetic components of salinity tolerance in two-row spring barley at the vegetative and reproductive stages. PLoS One 2020; 15:e0236037. [PMID: 32701981 PMCID: PMC7377408 DOI: 10.1371/journal.pone.0236037] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2020] [Accepted: 06/27/2020] [Indexed: 11/18/2022] Open
Abstract
Soil salinity imposes an agricultural and economic burden that may be alleviated by identifying the components of salinity tolerance in barley, a major crop and the most salt tolerant cereal. To improve our understanding of these components, we evaluated a diversity panel of 377 two-row spring barley cultivars during both the vegetative, in a controlled environment, and the reproductive stages, in the field. In the controlled environment, a high-throughput phenotyping platform was used to assess the growth-related traits under both control and saline conditions. In the field, the agronomic traits were measured from plots irrigated with either fresh or saline water. Association mapping for the different components of salinity tolerance enabled us to detect previously known associations, such as HvHKT1;5. Using an "interaction model", which took into account the interaction between treatment (control and salt) and genetic markers, we identified several loci associated with yield components related to salinity tolerance. We also observed that the two developmental stages did not share genetic regions associated with the components of salinity tolerance, suggesting that different mechanisms play distinct roles throughout the barley life cycle. Our association analysis revealed that genetically defined regions containing known flowering genes (Vrn-H3, Vrn-H1, and HvNAM-1) were responsive to salt stress. We identified a salt-responsive locus (7H, 128.35 cM) that was associated with grain number per ear, and suggest a gene encoding a vacuolar H+-translocating pyrophosphatase, HVP1, as a candidate. We also found a new QTL on chromosome 3H (139.22 cM), which was significant for ear number per plant, and a locus on chromosome 2H (141.87 cM), previously identified using a nested association mapping population, which associated with a yield component and interacted with salinity stress. Our study is the first to evaluate a barley diversity panel for salinity stress under both controlled and field conditions, allowing us to identify contributions from new components of salinity tolerance which could be used for marker-assisted selection when breeding for marginal and saline regions.
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Affiliation(s)
- Stephanie Saade
- Biological and Environmental Sciences and Engineering (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia
| | - Chris Brien
- School of Agriculture, Food and Wine, Waite Research Precinct, University of Adelaide, Urrbrae, South Australia, Australia
- School of Information Technology and Mathematical Sciences, University of South Australia, Adelaide, South Australia, Australia
- The Plant Accelerator, Australian Plant Phenomics Facility, Waite Research Precinct, University of Adelaide, Urrbrae, South Australia, Australia
| | - Yveline Pailles
- Biological and Environmental Sciences and Engineering (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia
| | - Bettina Berger
- School of Agriculture, Food and Wine, Waite Research Precinct, University of Adelaide, Urrbrae, South Australia, Australia
- The Plant Accelerator, Australian Plant Phenomics Facility, Waite Research Precinct, University of Adelaide, Urrbrae, South Australia, Australia
| | - Mohammad Shahid
- International Center for Biosaline Agriculture (ICBA), Dubai, United Arab Emirates
| | - Joanne Russell
- Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, Scotland
| | - Robbie Waugh
- School of Agriculture, Food and Wine, Waite Research Precinct, University of Adelaide, Urrbrae, South Australia, Australia
- Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, Scotland
- Division of Plant Sciences, School of Life Sciences, University of Dundee at The James Hutton Institute, Invergowrie, Dundee, Scotland
| | - Sónia Negrão
- School of Biology and Environmental Sciences, University College Dublin, Belfield, Dublin, Ireland
| | - Mark Tester
- Biological and Environmental Sciences and Engineering (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia
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16
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Wijewardene I, Mishra N, Sun L, Smith J, Zhu X, Payton P, Shen G, Zhang H. Improving drought-, salinity-, and heat-tolerance in transgenic plants by co-overexpressing Arabidopsis vacuolar pyrophosphatase gene AVP1 and Larrea Rubisco activase gene RCA. Plant Sci 2020; 296:110499. [PMID: 32540017 DOI: 10.1016/j.plantsci.2020.110499] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2020] [Revised: 03/31/2020] [Accepted: 04/06/2020] [Indexed: 05/25/2023]
Abstract
The severity and frequency of many abiotic stresses such as drought, salinity and heat, cause substantial crop losses worldwide, which poses a serious challenge in food security. To increase crop production, new approaches are needed. Previous research has shown that overexpression of the tonoplast H+ pyrophosphatase gene AVP1 leads to improved drought and salt tolerance in transgenic plants. Other research showed that overexpression of thermotolerant ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) activase gene could maintain photosynthesis at higher temperatures, which contributes to higher heat tolerance in transgenic plants. In nature, abiotic stresses rarely come alone, instead these stresses often occur in various combinations. Therefore, it is desirable to make crops more tolerant to multiple stresses, which will likely lead to higher crop yield under various stress conditions. It is shown here that co-overexpression of the Arabidopsis gene AVP1 and the Larrea Rubisco activase gene RCA significantly increases drought, salinity and heat tolerance, resulting in higher biomass and seed yield than wild-type plants. AVP1/RCA co-overexpressing plants are as more drought- and salt-tolerant as AVP1-overexpressing plants, and as more heat-tolerant as RCA-overexpressing plants. More importantly, they produce higher seed yields than AVP1-overexpressing, RCA-overexpressing, and wild-type plants under combined drought and heat conditions.
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Affiliation(s)
- Inosha Wijewardene
- Department of Biological Sciences, Texas Tech University, Lubbock, TX, 79409, USA
| | - Neelam Mishra
- St. Joseph's College Autonomous, Bengaluru, Karnataka, 560027, India
| | - Li Sun
- Department of Biological Sciences, Texas Tech University, Lubbock, TX, 79409, USA
| | - Jennifer Smith
- Department of Biological Sciences, Texas Tech University, Lubbock, TX, 79409, USA
| | - Xunlu Zhu
- Department of Biological Sciences, Texas Tech University, Lubbock, TX, 79409, USA
| | - Paxton Payton
- USDA-ARS Cropping Systems Research Laboratory, Lubbock, TX, USA
| | - Guoxin Shen
- Zhejiang Academy of Agricultural Sciences, Hangzhou, China.
| | - Hong Zhang
- Department of Biological Sciences, Texas Tech University, Lubbock, TX, 79409, USA.
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17
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Zhang QY, Gu KD, Cheng L, Wang JH, Yu JQ, Wang XF, You CX, Hu DG, Hao YJ. BTB-TAZ Domain Protein MdBT2 Modulates Malate Accumulation and Vacuolar Acidification in Response to Nitrate. Plant Physiol 2020; 183:750-764. [PMID: 32241879 PMCID: PMC7271804 DOI: 10.1104/pp.20.00208] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2020] [Accepted: 03/08/2020] [Indexed: 05/22/2023]
Abstract
Excessive application of nitrate, an essential macronutrient and a signal regulating diverse physiological processes, decreases malate accumulation in apple (Malus domestica) fruit, but the underlying mechanism remains poorly understood. Here, we show that an apple BTB/TAZ protein, MdBT2, is involved in regulating malate accumulation and vacuolar pH in response to nitrate. In vitro and in vivo assays indicate that MdBT2 interacts directly with and ubiquitinates a bHLH transcription factor, MdCIbHLH1, via the ubiquitin/26S proteasome pathway in response to nitrate. This ubiquitination results in the degradation of MdCIbHLH1 protein and reduces the transcription of MdCIbHLH1-targeted genes involved in malate accumulation and vacuolar acidification, including MdVHA-A, which encodes a vacuolar H+-ATPase, and MdVHP1, which encodes a vacuolar H+-pyrophosphatase, as well as MdALMT9, which encodes an aluminum-activated malate transporter. A series of transgenic analyses in apple materials including fruits, plantlets, and calli demonstrate that MdBT2 controls nitrate-mediated malate accumulation and vacuolar pH at least partially, if not completely, via regulating the MdCIbHLH1 protein level. Taken together, these findings reveal that MdBT2 regulates the stability of MdCIbHLH1 via ubiquitination in response to nitrate, which in succession transcriptionally reduces the expression of malate-associated genes, thereby controlling malate accumulation and vacuolar acidification in apples under high nitrate supply.
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Affiliation(s)
- Quan-Yan Zhang
- National Key Laboratory of Crop Biology, Shandong Collaborative Innovation Center of Fruit & Vegetable Quality and Efficient Production, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, Shandong 271018, China
| | - Kai-Di Gu
- National Key Laboratory of Crop Biology, Shandong Collaborative Innovation Center of Fruit & Vegetable Quality and Efficient Production, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, Shandong 271018, China
| | - Lailiang Cheng
- Department of Horticulture, Cornell University, 134A Plant Science, Ithaca, New York 14853
| | - Jia-Hui Wang
- Department of Horticulture, Cornell University, 134A Plant Science, Ithaca, New York 14853
| | - Jian-Qiang Yu
- National Key Laboratory of Crop Biology, Shandong Collaborative Innovation Center of Fruit & Vegetable Quality and Efficient Production, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, Shandong 271018, China
| | - Xiao-Fei Wang
- National Key Laboratory of Crop Biology, Shandong Collaborative Innovation Center of Fruit & Vegetable Quality and Efficient Production, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, Shandong 271018, China
| | - Chun-Xiang You
- National Key Laboratory of Crop Biology, Shandong Collaborative Innovation Center of Fruit & Vegetable Quality and Efficient Production, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, Shandong 271018, China
| | - Da-Gang Hu
- National Key Laboratory of Crop Biology, Shandong Collaborative Innovation Center of Fruit & Vegetable Quality and Efficient Production, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, Shandong 271018, China
- Department of Horticulture, Cornell University, 134A Plant Science, Ithaca, New York 14853
| | - Yu-Jin Hao
- National Key Laboratory of Crop Biology, Shandong Collaborative Innovation Center of Fruit & Vegetable Quality and Efficient Production, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, Shandong 271018, China
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18
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Zhang Y, Feng X, Wang L, Su Y, Chu Z, Sun Y. The structure, functional evolution, and evolutionary trajectories of the H +-PPase gene family in plants. BMC Genomics 2020; 21:195. [PMID: 32122295 PMCID: PMC7053079 DOI: 10.1186/s12864-020-6604-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2019] [Accepted: 02/21/2020] [Indexed: 08/16/2023] Open
Abstract
BACKGROUND The H+-PPase (pyrophosphatase) gene family is an important class of proton transporters that play key roles in plant development and stress resistance. Although the physiological and biochemical functions of H+-PPases are well characterized, the structural evolution and functional differentiation of this gene family remain unclear. RESULTS We identified 124 H+-PPase members from 27 plant species using complete genomic data obtained from algae to angiosperms. We found that all analyzed plants carried H+-PPase genes, and members were not limited to the two main types (type I and II). Differentiation of this gene family occurred early in evolutionary history, probably prior to the emergence of algae. The type I and II H+-PPase genes were retained during the subsequent evolution of higher plants, and their copy numbers increased rapidly in some angiosperms following whole-genome duplication (WGD) events, with obvious expression pattern differentiation among the new copies. We found significant functional divergence between type I and II H+-PPase genes, with both showing evidence for positive selection pressure. We classified angiosperm type I H+-PPases into subtypes Ia and non-Ia, which probably differentiated at an early stage of angiosperm evolution. Compared with non-Ia subtype, the Ia subtype appears to confer some advantage in angiosperms, as it is highly conserved and abundantly expressed, but shows no evidence for positive selection. CONCLUSIONS We hypothesized that there were many types of H+-PPase genes in the plant ancestral genome, and that different plant groups retained different types of these genes. In the early stages of angiosperm evolution, the type I H+-PPase genes differentiated into various subtypes. In addition, the expression pattern varied not only among genes of different types or subtypes, but also among copies of the same subtype. Based on the expression patterns and copy numbers of H+-PPase genes in higher plants, we propose two possible evolutionary trajectories for this gene family.
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Affiliation(s)
- Yiming Zhang
- College of Life Sciences, Langfang Normal University, Langfang, 065000, China
| | - Xue Feng
- College of Life Sciences, Langfang Normal University, Langfang, 065000, China
| | - Lihui Wang
- College of Plant Protection, Fujian Agricultural and Forestry University, Fuzhou, 350000, China
| | - Yanping Su
- College of Life Sciences, Langfang Normal University, Langfang, 065000, China
| | - Zhuodong Chu
- College of Life Sciences, Langfang Normal University, Langfang, 065000, China
| | - Yanxiang Sun
- College of Life Sciences, Langfang Normal University, Langfang, 065000, China.
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19
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Jiang YT, Tang RJ, Zhang YJ, Xue HW, Ferjani A, Luan S, Lin WH. Two tonoplast proton pumps function in Arabidopsis embryo development. New Phytol 2020; 225:1606-1617. [PMID: 31569267 DOI: 10.1111/nph.16231] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2019] [Accepted: 09/22/2019] [Indexed: 06/10/2023]
Abstract
Two types of tonoplast proton pumps, H+ -pyrophosphatase (V-PPase) and the H+ -ATPase (V-ATPase), establish the proton gradient that powers molecular traffic across the tonoplast thereby facilitating turgor regulation and nutrient homeostasis. However, how proton pumps regulate development remains unclear. In this study, we investigated the function of two types of proton pumps in Arabidopsis embryo development and pattern formation. While disruption of either V-PPase or V-ATPase had no obvious effect on plant embryo development, knocking out both resulted in severe defects in embryo pattern formation from the early stage. While the first division in wild-type zygote was asymmetrical, a nearly symmetrical division occurred in the mutant, followed by abnormal pattern formation at all stages of embryo development. The embryonic defects were accompanied by dramatic differences in vacuole morphology and distribution, as well as disturbed localisation of PIN1. The development of mutant cotyledons and root, and the auxin response of mutant seedlings supported the hypothesis that mutants lacking tonoplast proton pumps were defective in auxin transport and distribution. Taking together, we proposed that two tonoplast proton pumps are required for vacuole morphology and PIN1 localisation, thereby controlling vacuole and auxin-related developmental processes in Arabidopsis embryos and seedlings.
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Affiliation(s)
- Yu-Tong Jiang
- School of Life Sciences and Biotechnology, The Joint International Research Laboratory of Metabolic & Developmental Sciences, Shanghai Jiao Tong University, 200240, Shanghai, China
| | - Ren-Jie Tang
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA
| | - Yan-Jie Zhang
- School of Life Sciences and Biotechnology, The Joint International Research Laboratory of Metabolic & Developmental Sciences, Shanghai Jiao Tong University, 200240, Shanghai, China
| | - Hong-Wei Xue
- School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai, 200240, China
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, 200032, Shanghai, China
| | - Ali Ferjani
- Department of Biology, Tokyo Gakugei University, 184-8501, Koganei-shi, Japan
| | - Sheng Luan
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA
| | - Wen-Hui Lin
- School of Life Sciences and Biotechnology, The Joint International Research Laboratory of Metabolic & Developmental Sciences, Shanghai Jiao Tong University, 200240, Shanghai, China
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA
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20
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Zhang X, Kang H, Xiao J, Shi B, Li X, Chen G. LHPP Inhibits the Proliferation and Metastasis of Renal Cell Carcinoma. Biomed Res Int 2020; 2020:7020924. [PMID: 33426063 PMCID: PMC7772040 DOI: 10.1155/2020/7020924] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/19/2020] [Revised: 12/02/2020] [Accepted: 12/10/2020] [Indexed: 12/24/2022]
Abstract
Renal cell carcinoma (RCC) is one of the ten most common cancers in the globe. Despite the diagnosis and treatment of renal cell carcinoma that have made great improvements, the morbidity and mortality rates of renal cell carcinoma remain unchanged remarkably. LHPP is a kind of histidine phosphatases, acting as a tumor suppressor in the progression of various cancers. In this study, we found that LHPP was significantly downregulated in RCC tissues and cell lines. Decreased expression of LHPP was closely correlated with tumor size and postoperative metastasis of RCC patients. In addition, overexpression of LHPP inhibited the proliferation and metastasis of RCC. However, suppression of LHPP promoted the proliferation and metastasis of RCC. In conclusion, our results presented the important role of LHPP in the development and progression of RCC.
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Affiliation(s)
- Xiaoting Zhang
- Shenzhen Bao'an District Songgang People's Hospital, Shenzhen 518100, China
| | - Huaning Kang
- School of Pharmaceutical Sciences, Guangzhou Medical University, Guangzhou 511436, China
| | - Jing Xiao
- Shenzhen Bao'an District Songgang People's Hospital, Shenzhen 518100, China
| | - Benyan Shi
- Shenzhen Bao'an District Songgang People's Hospital, Shenzhen 518100, China
| | - Xiaofeng Li
- Department of Laboratory Medicine, Peking University Shenzhen Hospital, Shenzhen, Guangdong Province, China
| | - Guihong Chen
- Shenzhen Bao'an District Songgang People's Hospital, Shenzhen 518100, China
- School of Pharmaceutical Sciences, Guangzhou Medical University, Guangzhou 511436, China
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21
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Cui L, Gong X, Chang M, Yin Z, Geng H, Song Y, Lv J, Feng R, Wang F, Tang Y, Xu K. Association of LHPP genetic variation (rs35936514) with structural and functional connectivity of hippocampal-corticolimbic neural circuitry. Brain Imaging Behav 2019; 14:1025-1033. [PMID: 31250265 DOI: 10.1007/s11682-019-00140-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
A single nucleotide polymorphism at the LHPP gene (rs35936514) has been reported to be associated with major depressive disorder (MDD) in genome-wide association studies. We conducted a neuroimaging analysis to explore whether and which brain neural systems are affected by LHPP variation. Since LHPP variants seem to be associated with the hippocampus, we assessed the relationship between rs35936514 variation and structural-functional connectivity within a hippocampal-corticolimbic neural system implicated in MDD. A total of 122 Chinese subjects were divided into a CC homozygous group (CC genotype, n = 60) and a T allele-carrier group (CT/TT genotypes, n = 62). All subjects participated in resting-state functional magnetic resonance imaging (rs-fMRI) and diffusion tensor imaging (DTI) scans. Structural and functional connectivity data analyses were then performed. Compared to the CC group, the T allele-carrier group showed significantly higher fractional anisotropy (FA) values in the fornix as well as increased functional connectivity from the hippocampus to the rostral part of the anterior cingulate cortex (rACC). Moreover, a significant negative correlation between fornix FA value and hippocampus-rACC functional connectivity was identified (P < 0.05). These findings suggest that there is a relationship between rs35936514 variation and both structural and functional hippocampal-corticolimbic neural system involvement in MDD. LHPP may play an important role in the neuropathophysiology of MDD.
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Affiliation(s)
- Lingling Cui
- Department of Radiology, The First Affiliated Hospital of China Medical University, 155 Nanjing North Street, Heping District, Shenyang, 110001, Liaoning, People's Republic of China
| | - Xiaohong Gong
- State Key Laboratory of Genetic Engineering and MOE key Laboratory of Contemporary Anthroology, School of Life Sciences, Fudan University, Shanghai, China
| | - Miao Chang
- Department of Radiology, The First Affiliated Hospital of China Medical University, 155 Nanjing North Street, Heping District, Shenyang, 110001, Liaoning, People's Republic of China
| | - Zhiyang Yin
- Department of Psychiatry, The First Affiliated Hospital of China Medical University, Shenyang, China
| | - Haiyang Geng
- Department of Radiology, The First Affiliated Hospital of China Medical University, 155 Nanjing North Street, Heping District, Shenyang, 110001, Liaoning, People's Republic of China
| | - Yanzhuo Song
- Department of Psychiatry, The First Affiliated Hospital of China Medical University, Shenyang, China
| | - Jing Lv
- Department of Psychiatry, The First Affiliated Hospital of China Medical University, Shenyang, China
| | - Ruiqi Feng
- Department of Radiology, The First Affiliated Hospital of China Medical University, 155 Nanjing North Street, Heping District, Shenyang, 110001, Liaoning, People's Republic of China
| | - Fei Wang
- Department of Radiology, The First Affiliated Hospital of China Medical University, 155 Nanjing North Street, Heping District, Shenyang, 110001, Liaoning, People's Republic of China
- Department of Psychiatry, The First Affiliated Hospital of China Medical University, Shenyang, China
- Department of Psychiatry, Yale University School of Medicine, New Haven, CT, USA
- The Research Institute for Brain Functional Imaging, The First Affiliated Hospital of China Medical University, Shenyang, Liaoning, People's Republic of China
| | - Yanqing Tang
- Department of Psychiatry, The First Affiliated Hospital of China Medical University, Shenyang, China.
- Department of Geriatrics and Psychiatry, The First Affiliated Hospital, China Medical University, 155 Nanjing North Street, Heping District, Shenyang, 110001, Liaoning, People's Republic of China.
| | - Ke Xu
- Department of Radiology, The First Affiliated Hospital of China Medical University, 155 Nanjing North Street, Heping District, Shenyang, 110001, Liaoning, People's Republic of China.
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22
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Bhatti F, Asad S, Khan QM, Mobeen A, Iqbal MJ, Asif M. Risk assessment of genetically modified sugarcane expressing AVP1 gene. Food Chem Toxicol 2019; 130:267-275. [PMID: 31132391 DOI: 10.1016/j.fct.2019.05.034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2019] [Revised: 05/18/2019] [Accepted: 05/21/2019] [Indexed: 10/26/2022]
Abstract
Biosafety is a multidisciplinary approach that encompasses social, societal, ethical issues and policies for the regulations of genetically modified (GM) organisms. The potential health risks associated with GM sugarcane containing AVP1 gene confers resistance against drought and salinity were evaluated by animal feeding studies and some genotoxicity assays. Acute and sub-chronic toxicity examinations were carried out via oral dose administration of GM sugarcane juice supplemented with the normal diet (modified from certified rodent standard diet) on Wistar rats. AVP1 protein concentration in sugarcane juice was 1mg/1 mL. Biochemical, haematological blood analyses were performed and the results revealed that there were non-significant differences among all the treatment groups; GM sugarcane juice, non-GM sugarcane juice and the control group (normal diet and water). Genotoxicity assessment based on the comet assay and the micronucleus assay data exhibited that AVP1 GM sugarcane was not genotoxic or cytotoxic in rat's peripheral blood. These research findings supported the conclusion that GM AVP1 sugarcane was non-toxic in experimental animals. Therefore, data generated through this research work would be helpful for the commercial release of GM AVP1 sugarcane.
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Affiliation(s)
- Farheen Bhatti
- National Institute for Biotechnology and Genetic Engineering (NIBGE), P. O Box 577, Jhang Road, Faisalabad, Pakistan; Pakistan Institute of Engineering and Applied Sciences (PIEAS) University, Islamabad, Pakistan
| | - Shaheen Asad
- National Institute for Biotechnology and Genetic Engineering (NIBGE), P. O Box 577, Jhang Road, Faisalabad, Pakistan.
| | - Qaiser Mahmood Khan
- National Institute for Biotechnology and Genetic Engineering (NIBGE), P. O Box 577, Jhang Road, Faisalabad, Pakistan
| | - Ameena Mobeen
- National Institute for Biotechnology and Genetic Engineering (NIBGE), P. O Box 577, Jhang Road, Faisalabad, Pakistan
| | - Muhammad Javed Iqbal
- National Institute for Biotechnology and Genetic Engineering (NIBGE), P. O Box 577, Jhang Road, Faisalabad, Pakistan
| | - Muhammad Asif
- National Institute for Biotechnology and Genetic Engineering (NIBGE), P. O Box 577, Jhang Road, Faisalabad, Pakistan
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Asaoka M, Inoue SI, Gunji S, Kinoshita T, Maeshima M, Tsukaya H, Ferjani A. Excess Pyrophosphate within Guard Cells Delays Stomatal Closure. Plant Cell Physiol 2019; 60:875-887. [PMID: 30649470 DOI: 10.1093/pcp/pcz002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2018] [Accepted: 12/28/2018] [Indexed: 05/08/2023]
Abstract
A variety of cellular metabolic reactions generate inorganic pyrophosphate (PPi) as an ATP hydrolysis byproduct. The vacuolar H+-translocating pyrophosphatase (H+-PPase) loss-of-function fugu5 mutant is susceptible to drought and displays pleotropic postgerminative growth defects due to excess PPi. It was recently reported that stomatal closure after abscisic acid (ABA) treatment is delayed in vhp1-1, a fugu5 allele. In contrast, we found that specific removal of PPi rescued all of the above fugu5 developmental and growth defects. Hence, we speculated that excess PPi itself, rather than vacuolar acidification, might delay stomatal closure. To test this hypothesis, we constructed transgenic plants expressing the yeast IPP1 gene (encoding a cytosolic pyrophosphatase) driven by a guard cell-specific promoter (pGC1::IPP1) in the fugu5 background. Our measurements confirmed stomatal closure defects in fugu5, further supporting a role for H+-PPase in stomatal functioning. Importantly, while pGC1::IPP1 transgenics morphologically mimicked fugu5, stomatal closure was restored in response to ABA and darkness. Quantification of water loss revealed that fugu5 stomata were almost completely insensitive to ABA. In addition, growth of pGC1::IPP1 plants was promoted compared to fugu5 throughout their life; however, it did not reach the wild type level. fugu5 also displayed an increased stomatal index, in violation of the one-cell-spacing rule, and phenotypes recovered upon removal of PPi by pAVP1::IPP1 (FUGU5, VHP1 and AVP1 are the same gene encoding H+-PPase), but not in the pGC1::IPP1 line. Taken together, these results clearly support our hypothesis that dysfunction in stomata is triggered by excess PPi within guard cells, probably via perturbed guard cell metabolism.
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Affiliation(s)
- Mariko Asaoka
- Department of Biology, Tokyo Gakugei University, Koganei-shi, Tokyo, Japan
| | - Shin-Ichiro Inoue
- Division of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Japan
| | - Shizuka Gunji
- United Graduated School of Education, Tokyo Gakugei University, Tokyo, Japan
| | - Toshinori Kinoshita
- Division of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Japan
- Institute of Transformative Bio-Molecules (WPI-ITbM), Nagoya University, Nagoya, Japan
| | - Masayoshi Maeshima
- Laboratory of Cell Dynamics, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
| | - Hirokazu Tsukaya
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan
- Exploratory Research Center on Life and Living Systems (ExCELLS), Okazaki, Aichi, Japan
| | - Ali Ferjani
- Department of Biology, Tokyo Gakugei University, Koganei-shi, Tokyo, Japan
- United Graduated School of Education, Tokyo Gakugei University, Tokyo, Japan
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24
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Sun L, Pehlivan N, Esmaeili N, Jiang W, Yang X, Jarrett P, Mishra N, Zhu X, Cai Y, Herath M, Shen G, Zhang H. Co-overexpression of AVP1 and PP2A-C5 in Arabidopsis makes plants tolerant to multiple abiotic stresses. Plant Sci 2018; 274:271-283. [PMID: 30080613 DOI: 10.1016/j.plantsci.2018.05.026] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2018] [Revised: 04/30/2018] [Accepted: 05/25/2018] [Indexed: 05/20/2023]
Abstract
Abiotic stresses are major threats to agricultural production. Drought and salinity as two of the major abiotic stresses cause billions of losses in agricultural productivity worldwide each year. Thus, it is imperative to make crops more tolerant. Overexpression of AVP1 or PP2A-C5 was previously shown to increase drought and salt stress tolerance, respectively, in transgenic plants. In this study, the hypothesis that co-overexpression of AVP1 and PP2A-C5 would combine their respective benefits and further improve salt tolerance was tested. The two genes were inserted into the same T-DNA region of the binary vector and then introduced into the Arabidopsis genome through Agrobacterium-mediated transformation. Transgenic Arabidopsis plants expressing both AVP1 and PP2A-C5 at relatively high levels were identified and analyzed. These plants displayed enhanced tolerance to NaCl compared to either AVP1 or PP2A-C5 overexpressing plants. They also showed tolerance to other stresses such as KNO3 and LiCl at harmful concentrations, drought, and phosphorus deficiency at comparable levels with either AVP1 or PP2A-C5 overexpressing plants. This study demonstrates that introducing multiple genes in single T-DNA region is an effective approach to create transgenic plants with enhanced tolerance to multiple stresses.
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Affiliation(s)
- Li Sun
- Department of Biological Sciences, Texas Tech University, Texas 79409, USA
| | - Necla Pehlivan
- Department of Biology, Recep Tayyip Erdogan University, Rize 53100, Turkey
| | - Nardana Esmaeili
- Department of Biological Sciences, Texas Tech University, Texas 79409, USA
| | - Weijia Jiang
- West China School of Basic Medical Sciences & Forensic Medicine, Sichuan University, Chengdu, Sichuan 610064, China
| | - Xiaojie Yang
- Henan Academy of Agricultural Sciences, Zhengzhou, Henan 450002, China
| | - Philip Jarrett
- Department of Biological Sciences, Texas Tech University, Texas 79409, USA
| | - Neelam Mishra
- Department of Biological Sciences, Texas Tech University, Texas 79409, USA
| | - Xunlu Zhu
- Department of Biological Sciences, Texas Tech University, Texas 79409, USA
| | - Yifan Cai
- Department of Biological Sciences, Texas Tech University, Texas 79409, USA
| | - Maheshika Herath
- Department of Biological Sciences, Texas Tech University, Texas 79409, USA
| | - Guoxin Shen
- Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang Province, China.
| | - Hong Zhang
- Department of Biological Sciences, Texas Tech University, Texas 79409, USA.
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Wang L, Ma M, Zhang Y, Wu Z, Guo L, Luo W, Wang L, Zhang Z, Zhang S. Characterization of the Genes Involved in Malic Acid Metabolism from Pear Fruit and Their Expression Profile after Postharvest 1-MCP/Ethrel Treatment. J Agric Food Chem 2018; 66:8772-8782. [PMID: 30074786 DOI: 10.1021/acs.jafc.8b02598] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
In this study, five genes involved in malic acid (MA) metabolism, including a cytosolic NAD-dependent malate dehydrogenase gene ( cyNAD-MDH), a cytosolic NADP-dependent malic enzyme gene ( cyNADP-ME), two vacuolar H+-ATPase genes ( vVAtp1 and vVAtp2), and one vacuolar inorganic pyrophosphatase gene ( vVPp), were characterized from pear fruit based on bioinformatic and experimental analysis. Their expression profile in "Housui" pear was tissue-specific, and their expression patterns during fruit development were diverse. During "Housui" pear storage, MA content decreased, which was associated with the downregulated transcripts of MA metabolism-related genes and cyNAD-MDH activity and higher cyNADP-ME activity. The response of MA metabolism to postharvest 1.5 μL L-1 1-MCP fumigation and 0.5 mL L-1 ethrel dipping was distinct: 1-MCP fumigation upregulated gene expression and cyNAD-MDH activity and suppressed cyNADP-ME activity, and thus maintained higher MA abundance when compared with those in the control; on the other hand, an opposite behavior was observed in ethrel-treated fruit.
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Affiliation(s)
- Libin Wang
- Centre of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement , Nanjing Agricultural University , Nanjing , Jiangsu 210095 , China
| | - Min Ma
- Centre of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement , Nanjing Agricultural University , Nanjing , Jiangsu 210095 , China
| | - Yanru Zhang
- Centre of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement , Nanjing Agricultural University , Nanjing , Jiangsu 210095 , China
| | - Zhangfei Wu
- Centre of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement , Nanjing Agricultural University , Nanjing , Jiangsu 210095 , China
| | - Lin Guo
- Centre of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement , Nanjing Agricultural University , Nanjing , Jiangsu 210095 , China
| | - Weiqi Luo
- USDA, ARS, U.S. Horticultural Research Laboratory , 2001 S. Rock Road , Ft. Pierce , Florida 34945 , United States
| | - Li Wang
- Centre of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement , Nanjing Agricultural University , Nanjing , Jiangsu 210095 , China
| | - Zhen Zhang
- Centre of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement , Nanjing Agricultural University , Nanjing , Jiangsu 210095 , China
| | - Shaoling Zhang
- Centre of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement , Nanjing Agricultural University , Nanjing , Jiangsu 210095 , China
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26
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Andersson M, Turesson H, Arrivault S, Zhang Y, Fält AS, Fernie AR, Hofvander P. Inhibition of plastid PPase and NTT leads to major changes in starch and tuber formation in potato. J Exp Bot 2018; 69:1913-1924. [PMID: 29538769 PMCID: PMC6018912 DOI: 10.1093/jxb/ery051] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Accepted: 02/06/2018] [Indexed: 05/18/2023]
Abstract
The importance of a plastidial soluble inorganic pyrophosphatase (psPPase) and an ATP/ADP translocator (NTT) for starch composition and tuber formation in potato (Solanum tuberosum) was evaluated by individual and simultaneous down-regulation of the corresponding endogenous genes. Starch and amylose content of the transgenic lines were considerably lower, and granule size substantially smaller, with down-regulation of StpsPPase generating the most pronounced effects. Single-gene down-regulation of either StpsPPase or StNTT resulted in increased tuber numbers per plant and higher fresh weight yield. In contrast, when both genes were inhibited simultaneously, some lines developed only a few, small and distorted tubers. Analysis of metabolites revealed altered amounts of sugar intermediates, and a substantial increase in ADP-glucose content of the StpsPPase lines. Increased amounts of intermediates of vitamin C biosynthesis were also observed. This study suggests that hydrolysis of pyrophosphate (PPi) by action of a psPPase is vital for functional starch accumulation in potato tubers and that no additional mechanism for consuming, hydrolysing, or exporting PPi exists in the studied tissue. Additionally, it demonstrates that functional PPi hydrolysis in combination with efficient ATP import is essential for tuber formation and development.
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Affiliation(s)
- Mariette Andersson
- Department of Plant Breeding, Swedish University of Agricultural Sciences, Alnarp, Sweden
| | - Helle Turesson
- Department of Plant Breeding, Swedish University of Agricultural Sciences, Alnarp, Sweden
| | - Stéphanie Arrivault
- Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg, Potsdam-Golm, Germany
| | - Youjun Zhang
- Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg, Potsdam-Golm, Germany
| | - Ann-Sofie Fält
- Department of Plant Breeding, Swedish University of Agricultural Sciences, Alnarp, Sweden
| | - Alisdair R Fernie
- Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg, Potsdam-Golm, Germany
| | - Per Hofvander
- Department of Plant Breeding, Swedish University of Agricultural Sciences, Alnarp, Sweden
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27
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Cruz CS, Costa EP, Machado JA, Silva JN, Romeiro NC, Moraes J, Silva JR, Fonseca RN, Vaz IS, Logullo C, Campos E. A soluble inorganic pyrophosphatase from the cattle tick Rhipicephalus microplus capable of hydrolysing polyphosphates. Insect Mol Biol 2018; 27:260-267. [PMID: 29271528 DOI: 10.1111/imb.12369] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Polyphosphates have been found in all cell types examined to date and play diverse roles depending on the cell type. In eukaryotic organisms, polyphosphates have been investigated mainly in mammalian cells, and only a few studies have addressed arthropods. Pyrophosphatases have been shown to regulate polyphosphate metabolism. However, these studies were restricted to trypanosomatids. Here we focus on the tick Rhipicephalus microplus, a haematophagous ectoparasite that is highly harmful to cattle. We produced a recombinant R. microplus pyrophosphatase (rRmPPase) with the aim of investigating its kinetic parameters using polyphosphates as substrate. Molecular docking assays of RmPPase with polyphosphates were also carried out. The kinetic and Hill coefficient parameters indicated that rRmPPase has a greater affinity, higher catalytic efficiency and increased cooperativity for sodium phosphate glass type 15 (polyP15 ) than for sodium tripolyphosphate (polyP3 ). Through molecular docking, we found that polyP3 binds close to the Mg2+ atoms in the catalytic region of the protein, participating in their coordination network, whereas polyP15 interactions involve negatively charged phosphate groups and basic amino acid residues, such as Lys56, Arg58 and Lys193; polyP15 has a more favourable theoretical binding affinity than polyP3 , thus supporting the kinetic data. This study shows, for the first time in arthropods, a pyrophosphatase with polyphosphatase activity, suggesting its participation in polyphosphate metabolism.
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Affiliation(s)
- C S Cruz
- Laboratório Integrado de Bioquímica - Hatisaburo Masuda, UFRJ, NUPEM, São José do Barreto, Macaé, Rio de Janeiro, Brazil
| | - E P Costa
- Laboratório de Química e Função de Proteínas e Peptídeos and Unidade de Experimentação Animal - CBB - UENF, Horto, Campos dos Goytacazes, Rio de Janeiro, Brazil
| | - J A Machado
- Laboratório de Química e Função de Proteínas e Peptídeos and Unidade de Experimentação Animal - CBB - UENF, Horto, Campos dos Goytacazes, Rio de Janeiro, Brazil
| | - J N Silva
- Laboratório de Química e Função de Proteínas e Peptídeos and Unidade de Experimentação Animal - CBB - UENF, Horto, Campos dos Goytacazes, Rio de Janeiro, Brazil
| | - N C Romeiro
- Laboratório de Química e Função de Proteínas e Peptídeos and Unidade de Experimentação Animal - CBB - UENF, Horto, Campos dos Goytacazes, Rio de Janeiro, Brazil
| | - J Moraes
- Laboratório Integrado de Bioquímica - Hatisaburo Masuda, UFRJ, NUPEM, São José do Barreto, Macaé, Rio de Janeiro, Brazil
- Instituto Nacional de Ciência e Tecnologia - Entomologia Molecular, Rio de Janeiro, Brazil
| | - J R Silva
- Laboratório Integrado de Bioquímica - Hatisaburo Masuda, UFRJ, NUPEM, São José do Barreto, Macaé, Rio de Janeiro, Brazil
- Instituto Nacional de Ciência e Tecnologia - Entomologia Molecular, Rio de Janeiro, Brazil
| | - R N Fonseca
- Laboratório Integrado de Bioquímica - Hatisaburo Masuda, UFRJ, NUPEM, São José do Barreto, Macaé, Rio de Janeiro, Brazil
- Instituto Nacional de Ciência e Tecnologia - Entomologia Molecular, Rio de Janeiro, Brazil
| | - I S Vaz
- Instituto Nacional de Ciência e Tecnologia - Entomologia Molecular, Rio de Janeiro, Brazil
- Centro de Biotecnologia e Faculdade de Veterinária, UFRGS, Porto Alegre, Rio Grande do Sul, Brazil
| | - C Logullo
- Laboratório de Química e Função de Proteínas e Peptídeos and Unidade de Experimentação Animal - CBB - UENF, Horto, Campos dos Goytacazes, Rio de Janeiro, Brazil
- Instituto Nacional de Ciência e Tecnologia - Entomologia Molecular, Rio de Janeiro, Brazil
| | - E Campos
- Laboratório Integrado de Bioquímica - Hatisaburo Masuda, UFRJ, NUPEM, São José do Barreto, Macaé, Rio de Janeiro, Brazil
- Instituto Nacional de Ciência e Tecnologia - Entomologia Molecular, Rio de Janeiro, Brazil
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28
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Hanchi M, Thibaud MC, Légeret B, Kuwata K, Pochon N, Beisson F, Cao A, Cuyas L, David P, Doerner P, Ferjani A, Lai F, Li-Beisson Y, Mutterer J, Philibert M, Raghothama KG, Rivasseau C, Secco D, Whelan J, Nussaume L, Javot H. The Phosphate Fast-Responsive Genes PECP1 and PPsPase1 Affect Phosphocholine and Phosphoethanolamine Content. Plant Physiol 2018; 176:2943-2962. [PMID: 29475899 PMCID: PMC5884592 DOI: 10.1104/pp.17.01246] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2017] [Accepted: 02/06/2018] [Indexed: 05/24/2023]
Abstract
Phosphate starvation-mediated induction of the HAD-type phosphatases PPsPase1 (AT1G73010) and PECP1 (AT1G17710) has been reported in Arabidopsis (Arabidopsis thaliana). However, little is known about their in vivo function or impact on plant responses to nutrient deficiency. The preferences of PPsPase1 and PECP1 for different substrates have been studied in vitro but require confirmation in planta. Here, we examined the in vivo function of both enzymes using a reverse genetics approach. We demonstrated that PPsPase1 and PECP1 affect plant phosphocholine and phosphoethanolamine content, but not the pyrophosphate-related phenotypes. These observations suggest that the enzymes play a similar role in planta related to the recycling of polar heads from membrane lipids that is triggered during phosphate starvation. Altering the expression of the genes encoding these enzymes had no effect on lipid composition, possibly due to compensation by other lipid recycling pathways triggered during phosphate starvation. Furthermore, our results indicated that PPsPase1 and PECP1 do not influence phosphate homeostasis, since the inactivation of these genes had no effect on phosphate content or on the induction of molecular markers related to phosphate starvation. A combination of transcriptomics and imaging analyses revealed that PPsPase1 and PECP1 display a highly dynamic expression pattern that closely mirrors the phosphate status. This temporal dynamism, combined with the wide range of induction levels, broad expression, and lack of a direct effect on Pi content and regulation, makes PPsPase1 and PECP1 useful molecular markers of the phosphate starvation response.
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Affiliation(s)
- Mohamed Hanchi
- Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Aix Marseille Université, UMR7265, Institut de Biosciences et Biotechnologies, Cadarache, 13108 St Paul Lez Durance, France
| | - Marie-Christine Thibaud
- Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Aix Marseille Université, UMR7265, Institut de Biosciences et Biotechnologies, Cadarache, 13108 St Paul Lez Durance, France
| | - Bertrand Légeret
- Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Aix Marseille Université, UMR7265, Institut de Biosciences et Biotechnologies, Cadarache, 13108 St Paul Lez Durance, France
| | - Keiko Kuwata
- Institute of Transformative Bio-Molecules (WPI-ITbM), Nagoya University, Furo-cho, Chikusa, Nagoya 464-8601, Japan
| | - Nathalie Pochon
- Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Aix Marseille Université, UMR7265, Institut de Biosciences et Biotechnologies, Cadarache, 13108 St Paul Lez Durance, France
| | - Fred Beisson
- Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Aix Marseille Université, UMR7265, Institut de Biosciences et Biotechnologies, Cadarache, 13108 St Paul Lez Durance, France
| | - Aiqin Cao
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907
| | - Laura Cuyas
- Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Aix Marseille Université, UMR7265, Institut de Biosciences et Biotechnologies, Cadarache, 13108 St Paul Lez Durance, France
| | - Pascale David
- Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Aix Marseille Université, UMR7265, Institut de Biosciences et Biotechnologies, Cadarache, 13108 St Paul Lez Durance, France
| | - Peter Doerner
- School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, United Kingdom
| | - Ali Ferjani
- Department of Biology, Tokyo Gakugei University, Koganei-shi, Tokyo, Japan 184-8501
| | - Fan Lai
- School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, United Kingdom
| | - Yonghua Li-Beisson
- Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Aix Marseille Université, UMR7265, Institut de Biosciences et Biotechnologies, Cadarache, 13108 St Paul Lez Durance, France
| | - Jérôme Mutterer
- Institute of Plant Molecular Biology, Centre National de la Recherche Scientifique, University of Strasbourg, 67084 Strasbourg, France
| | - Michel Philibert
- Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Aix Marseille Université, UMR7265, Institut de Biosciences et Biotechnologies, Cadarache, 13108 St Paul Lez Durance, France
| | - Kashchandra G Raghothama
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907
| | - Corinne Rivasseau
- CEA, CNRS, INRA, Université Grenoble Alpes, Institut de Biosciences et Biotechnologies de Grenoble, UMR5168, Grenoble, France
| | - David Secco
- ARC Centre of Excellence in Plant Energy Biology, The University of Western Australia, Perth 6009 WA, Australia
| | - James Whelan
- Department of Animal, Plant, and Soil Science, School of Life Science, ARC Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora 3086, Australia
| | - Laurent Nussaume
- Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Aix Marseille Université, UMR7265, Institut de Biosciences et Biotechnologies, Cadarache, 13108 St Paul Lez Durance, France
| | - Hélène Javot
- Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Aix Marseille Université, UMR7265, Institut de Biosciences et Biotechnologies, Cadarache, 13108 St Paul Lez Durance, France
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Hsu YD, Huang YF, Pan YJ, Huang LK, Liao YY, Lin WH, Liu TY, Lee CH, Pan RL. Regulation of H +-pyrophosphatase by 14-3-3 Proteins from Arabidopsis thaliana. J Membr Biol 2018; 251:263-276. [PMID: 29453559 DOI: 10.1007/s00232-018-0020-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2017] [Accepted: 02/10/2018] [Indexed: 12/29/2022]
Abstract
Plant vacuolar H+-transporting inorganic pyrophosphatase (V-PPase; EC 3.6.1.1) is a crucial enzyme that exists on the tonoplast to maintain pH homeostasis across the vacuolar membrane. This enzyme generates proton gradient between cytosol and vacuolar lumen by hydrolysis of a metabolic byproduct, pyrophosphate (PP i ). The regulation of V-PPase at protein level has drawn attentions of many workers for decades, but its mechanism is still unclear. In this work, we show that AVP1, the V-PPase from Arabidopsis thaliana, is a target protein for regulatory 14-3-3 proteins at the vacuolar membrane, and all twelve 14-3-3 isoforms were analyzed for their association with AVP1. In the presence of 14-3-3ν, -µ, -ο, and -ι, both enzymatic activities and its associated proton pumping of AVP1 were increased. Among these 14-3-3 proteins, 14-3-3 µ shows the highest stimulation on coupling efficiency. Furthermore, 14-3-3ν, -µ, -ο, and -ι exerted protection of AVP1 against the inhibition of suicidal substrate PP i at high concentration. Moreover, the thermal profile revealed the presence of 14-3-3ο improves the structural stability of AVP1 against high temperature deterioration. Additionally, the 14-3-3 proteins mitigate the inhibition of Na+ to AVP1. Besides, the binding sites/motifs of AVP1 were identified for each 14-3-3 protein. Taken together, a working model was proposed to elucidate the association of 14-3-3 proteins with AVP1 for stimulation of its enzymatic activity.
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Affiliation(s)
- Yu-Di Hsu
- Department of Life Science and Institute of Bioinformatics and Structural Biology, College of Life Science, National Tsing Hua University, Hsin Chu, 30013, Taiwan, Republic of China
| | - Yu-Fen Huang
- Department of Life Science and Institute of Bioinformatics and Structural Biology, College of Life Science, National Tsing Hua University, Hsin Chu, 30013, Taiwan, Republic of China
| | - Yih-Jiuan Pan
- Department of Life Science and Institute of Bioinformatics and Structural Biology, College of Life Science, National Tsing Hua University, Hsin Chu, 30013, Taiwan, Republic of China
| | - Li-Kun Huang
- Department of Life Science and Institute of Bioinformatics and Structural Biology, College of Life Science, National Tsing Hua University, Hsin Chu, 30013, Taiwan, Republic of China
| | - Ya-Yun Liao
- Department of Life Science and Institute of Bioinformatics and Structural Biology, College of Life Science, National Tsing Hua University, Hsin Chu, 30013, Taiwan, Republic of China
| | - Wei-Hua Lin
- Department of Life Science and Institute of Bioinformatics and Structural Biology, College of Life Science, National Tsing Hua University, Hsin Chu, 30013, Taiwan, Republic of China
| | - Tzu-Yin Liu
- Department of Life Science and Institute of Bioinformatics and Structural Biology, College of Life Science, National Tsing Hua University, Hsin Chu, 30013, Taiwan, Republic of China
| | - Ching-Hung Lee
- Department of Life Science and Institute of Bioinformatics and Structural Biology, College of Life Science, National Tsing Hua University, Hsin Chu, 30013, Taiwan, Republic of China.
| | - Rong-Long Pan
- Department of Life Science and Institute of Bioinformatics and Structural Biology, College of Life Science, National Tsing Hua University, Hsin Chu, 30013, Taiwan, Republic of China.
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30
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Meng L, Li S, Guo J, Guo Q, Mao P, Tian X. Molecular cloning and functional characterisation of an H +-pyrophosphatase from Iris lactea. Sci Rep 2017; 7:17779. [PMID: 29259318 PMCID: PMC5736642 DOI: 10.1038/s41598-017-18032-3] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2016] [Accepted: 12/05/2017] [Indexed: 11/18/2022] Open
Abstract
Tonoplast H+-pyrophosphatases (VPs) mediate vacuolar Na+ sequestration, a process important for salt tolerance of plants. The function of VP in the highly drought- and salt-tolerant perennial Iris lactea under salt stress is unclear. Here, we isolated IlVP from I. lactea and investigated its function in transgenic tobacco. IlVP was found to comprise 771 amino acid residues and showed 88% similarity with Arabidopsis AtVP1. IlVP was mainly expressed in shoots and was up-regulated by salt stress. Overexpression of IlVP enhanced growth of transgenic tobacco plants compared with wild-type (WT) plants exposed to salt stress. Transgenic plants accumulated higher quantities of Na+ and K+ in leaves, stems, and roots under salt stress, which caused higher leaf relative water content and decreased cell membrane damage compared with WT plants. Overall, IlVP encoding a tonoplast H+-pyrophosphatase can reduce Na+ toxicity in plant cells through increased sequestration of ions into vacuoles by enhanced H+-pyrophosphatase activity.
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Affiliation(s)
- Lin Meng
- Beijing Research and Development Center for Grass and Environment, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, P. R. China.
| | - Shanshan Li
- Beijing Research and Development Center for Grass and Environment, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, P. R. China
| | - Jingya Guo
- Beijing Research and Development Center for Grass and Environment, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, P. R. China
| | - Qiang Guo
- Beijing Research and Development Center for Grass and Environment, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, P. R. China
| | - Peichun Mao
- Beijing Research and Development Center for Grass and Environment, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, P. R. China
| | - Xiaoxia Tian
- Beijing Research and Development Center for Grass and Environment, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, P. R. China
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31
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Lv S, Jiang P, Tai F, Wang D, Feng J, Fan P, Bao H, Li Y. The V-ATPase subunit A is essential for salt tolerance through participating in vacuolar Na + compartmentalization in Salicornia europaea. Planta 2017; 246:1177-1187. [PMID: 28825133 DOI: 10.1007/s00425-017-2762-0] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2017] [Accepted: 08/15/2017] [Indexed: 05/25/2023]
Abstract
The V-ATPase subunit A participates in vacuolar Na + compartmentalization in Salicornia europaea regulating V-ATPase and V-PPase activities. Na+ sequestration into the vacuole is an efficient strategy in response to salinity in many halophytes. However, it is not yet fully understood how this process is achieved. Particularly, the role of vacuolar H+-ATPase (V-ATPase) in this process is controversial. Our previous proteomic investigation in the euhalophyte Salicornia europaea L. found a significant increase of the abundance of V-ATPase subunit A under salinity. Here, the gene encoding this subunit named SeVHA-A was characterized, and its role in salt tolerance was demonstrated by RNAi directed downregulation in suspension-cultured cells of S. europaea. The transcripts of genes encoding vacuolar H+-PPase (V-PPase) and vacuolar Na+/H+ antiporter (SeNHX1) also decreased significantly in the RNAi cells. Knockdown of SeVHA-A resulted in a reduction in both V-ATPase and vacuolar H+-PPase (V-PPase) activities. Accordingly, the SeVHA-A-RNAi cells showed increased vacuolar pH and decreased cell viability under different NaCl concentrations. Further Na+ staining showed the reduced vacuolar Na+ sequestration in RNAi cells. Taken together, our results evidenced that SeVHA-A participates in vacuolar Na+ sequestration regulating V-ATPase and V-PPase activities and thereby vacuolar pH in S. europaea. The possible mechanisms underlying the reduction of vacuolar V-PPase activity in SeVHA-A-RNAi cells were also discussed.
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Affiliation(s)
- Sulian Lv
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Ping Jiang
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Fang Tai
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Duoliya Wang
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Juanjuan Feng
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Pengxiang Fan
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Hexigeduleng Bao
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Yinxin Li
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
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32
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He R, Yu G, Han X, Han J, Li W, Wang B, Huang S, Cheng X. ThPP1 gene, encodes an inorganic pyrophosphatase in Thellungiella halophila, enhanced the tolerance of the transgenic rice to alkali stress. Plant Cell Rep 2017; 36:1929-1942. [PMID: 29030650 DOI: 10.1007/s00299-017-2208-y] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2017] [Accepted: 09/12/2017] [Indexed: 05/14/2023]
Abstract
An inorganic pyrophosphorylase gene, ThPP1 , modulated the accumulations of phosphate and osmolytes by up-regulating the differentially expression genes, thus enhancing the tolerance of the transgenic rice to alkali stress (AS). Inorganic pyrophosphorylase is essential in catalyzing the hydrolysis of pyrophosphate to inorganic phosphate during plant growth. Here, we report the changes of physiological osmolytes and differentially expression genes in the transgenic rice overexpressing a soluble inorganic pyrophosphatase gene ThPP1 of Thellungiella halophila in response to AS. Analyses showed that the ThPP1 gene was a PPase family I member which is located to the cytoplasm. Data showed that the transgenic lines revealed an enhanced tolerance to AS compared to the wild type, and effectively increased the accumulations of inorganic phosphate and organic small molecules starch, sucrose, proline and chlorophyll, and maintained the balance of osmotic potential by modulating the ratio of Na+/K+ in plant cells. Under AS, total 379 of differentially expression genes were up-regulated in the leaves of the transgenic line compared with control, and the enhanced tolerance of the transgenic rice to the AS seemed to be associated with the up-regulations of the osmotic stress-related genes such as the L-type lectin-domain containing receptor kinase (L-type LecRK), the cation/H+ antiporter gene and the vacuolar cation/proton exchanger 1 gene (CAX1), which conferred the involvements in the biosynthesis and metabolic pathways. Protein interaction showed that the ThPP1 protein specifically interacted with a 16# target partner of the photosystem II light-harvesting-Chl-binding protein. This study suggested that the ThPP1 gene plays an important regulatory role in conferring the tolerance of the transgenic rice to AS, and is an effective candidate in molecular breeding for crop cultivation of the alkali tolerance.
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Affiliation(s)
- Rui He
- College of Land and Environment, Shenyang Agricultural University, No. 120 Dongling Road, Shenyang, 110866, Liaoning, People's Republic of China
- Key Lab of Plant Nutrition and Fertilizers, Ministry of Agriculture, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, No. 12 South Street, Zhongguancun, Beijing, 100081, People's Republic of China
| | - Guohong Yu
- Key Lab of Plant Nutrition and Fertilizers, Ministry of Agriculture, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, No. 12 South Street, Zhongguancun, Beijing, 100081, People's Republic of China
| | - Xiaori Han
- College of Land and Environment, Shenyang Agricultural University, No. 120 Dongling Road, Shenyang, 110866, Liaoning, People's Republic of China
| | - Jiao Han
- Key Lab of Plant Nutrition and Fertilizers, Ministry of Agriculture, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, No. 12 South Street, Zhongguancun, Beijing, 100081, People's Republic of China
- College of Life Science, Shanxi Normal University, No. 1 Gongyue Street, Yaodu Area, Linfen, 0410004, Shanxi, People's Republic of China
| | - Wei Li
- Key Lab of Plant Nutrition and Fertilizers, Ministry of Agriculture, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, No. 12 South Street, Zhongguancun, Beijing, 100081, People's Republic of China
| | - Bing Wang
- Key Lab of Plant Nutrition and Fertilizers, Ministry of Agriculture, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, No. 12 South Street, Zhongguancun, Beijing, 100081, People's Republic of China
| | - Shengcai Huang
- Key Lab of Plant Nutrition and Fertilizers, Ministry of Agriculture, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, No. 12 South Street, Zhongguancun, Beijing, 100081, People's Republic of China
| | - Xianguo Cheng
- Key Lab of Plant Nutrition and Fertilizers, Ministry of Agriculture, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, No. 12 South Street, Zhongguancun, Beijing, 100081, People's Republic of China.
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Abstract
Clustered regularly interspaced short palindromic repeats (CRISPR) and the CRISPR associated protein 9 (Cas9) system allows effective gene modification through RNA-guided DNA targeting. The Cas9 has undergone a series of functional alterations from the original active endonuclease to partially or completely deactivated Cas9. The catalytically deactivated Cas9 (dCas9) offers a platform to regulate transcriptional expression with the addition of activator or repressor domains. We redesigned a CRISPR/Cas9 activation system by adding the p65 transactivating subunit of NF-kappa B and a heat-shock factor 1 (HSF) activation domain to dCas9 bound with the VP64 (tetramer of VP16) activation domain for application in plants. The redesigned CRISPR/Cas9 activation system was tested in Arabidopsis to increase endogenous transcriptional levels of production ofanthocyaninpigment 1 (PAP1) and Arabidopsis thalianavacuolar H+-pyrophosphatase (AVP1). The expression of PAP1 was increased two- to three-fold and the activated plants exhibited purple leaves similar to that of PAP1 overexpressors. The AVP1 gene expression was increased two- to five-fold in transgenic plants. In comparison to the wild type, AVP1 activated plants had increased leaf numbers, larger single-leaf areas and improved tolerance to drought stress. The AVP1 activated plants showed similar phenotypes to AVP1 overexpressors. Therefore, the redesigned CRISPR/Cas9 activation system containing modified p65-HSF provides a simple approach for producing activated plants by upregulating endogenous transcriptional levels.
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Affiliation(s)
- Jong-Jin Park
- Forage Improvement Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma, United States of America
- BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
| | - Emma Dempewolf
- Forage Improvement Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma, United States of America
| | - Wenzheng Zhang
- Forage Improvement Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma, United States of America
| | - Zeng-Yu Wang
- Forage Improvement Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma, United States of America
- BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
- * E-mail:
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34
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Fan W, Wang H, Wu Y, Yang N, Yang J, Zhang P. H + -pyrophosphatase IbVP1 promotes efficient iron use in sweet potato [Ipomoea batatas (L.) Lam.]. Plant Biotechnol J 2017; 15:698-712. [PMID: 27864852 PMCID: PMC5425394 DOI: 10.1111/pbi.12667] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2016] [Revised: 10/23/2016] [Accepted: 11/16/2016] [Indexed: 05/08/2023]
Abstract
Iron (Fe) deficiency is one of the most common micronutrient deficiencies limiting crop production globally, especially in arid regions because of decreased availability of iron in alkaline soils. Sweet potato [Ipomoea batatas (L.) Lam.] grows well in arid regions and is tolerant to Fe deficiency. Here, we report that the transcription of type I H+ -pyrophosphatase (H+ -PPase) gene IbVP1 in sweet potato plants was strongly induced by Fe deficiency and auxin in hydroponics, improving Fe acquisition via increased rhizosphere acidification and auxin regulation. When overexpressed, transgenic plants show higher pyrophosphate hydrolysis and plasma membrane H+ -ATPase activity compared with the wild type, leading to increased rhizosphere acidification. The IbVP1-overexpressing plants showed better growth, including enlarged root systems, under Fe-sufficient or Fe-deficient conditions. Increased ferric precipitation and ferric chelate reductase activity in the roots of transgenic lines indicate improved iron uptake, which is also confirmed by increased Fe content and up-regulation of Fe uptake genes, e.g. FRO2, IRT1 and FIT. Carbohydrate metabolism is significantly affected in the transgenic lines, showing increased sugar and starch content associated with the increased expression of AGPase and SUT1 genes and the decrease in β-amylase gene expression. Improved antioxidant capacities were also detected in the transgenic plants, which showed reduced H2 O2 accumulation associated with up-regulated ROS-scavenging activity. Therefore, H+ -PPase plays a key role in the response to Fe deficiency by sweet potato and effectively improves the Fe acquisition by overexpressing IbVP1 in crops cultivated in micronutrient-deficient soils.
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Affiliation(s)
- Weijuan Fan
- National Key Laboratory of Plant Molecular GeneticsCAS Center for Excellence in Molecular Plant SciencesInstitute of Plant Physiology and EcologyShanghai Institutes for Biological SciencesChinese Academy of SciencesShanghaiChina
| | - Hongxia Wang
- National Key Laboratory of Plant Molecular GeneticsCAS Center for Excellence in Molecular Plant SciencesInstitute of Plant Physiology and EcologyShanghai Institutes for Biological SciencesChinese Academy of SciencesShanghaiChina
| | - Yinliang Wu
- National Key Laboratory of Plant Molecular GeneticsCAS Center for Excellence in Molecular Plant SciencesInstitute of Plant Physiology and EcologyShanghai Institutes for Biological SciencesChinese Academy of SciencesShanghaiChina
| | - Nan Yang
- National Key Laboratory of Plant Molecular GeneticsCAS Center for Excellence in Molecular Plant SciencesInstitute of Plant Physiology and EcologyShanghai Institutes for Biological SciencesChinese Academy of SciencesShanghaiChina
| | - Jun Yang
- Shanghai Key Laboratory of Plant Functional Genomics and ResourcesShanghai Chenshan Plant Science Research CenterChinese Academy of SciencesShanghai Chenshan Botanical GardenShanghaiChina
| | - Peng Zhang
- National Key Laboratory of Plant Molecular GeneticsCAS Center for Excellence in Molecular Plant SciencesInstitute of Plant Physiology and EcologyShanghai Institutes for Biological SciencesChinese Academy of SciencesShanghaiChina
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35
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Eaves DJ, Haque T, Tudor RL, Barron Y, Zampronio CG, Cotton NPJ, de Graaf BHJ, White SA, Cooper HJ, Franklin FCH, Harper JF, Franklin-Tong VE. Identification of Phosphorylation Sites Altering Pollen Soluble Inorganic Pyrophosphatase Activity. Plant Physiol 2017; 173:1606-1616. [PMID: 28126844 PMCID: PMC5338664 DOI: 10.1104/pp.16.01450] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2016] [Accepted: 01/13/2017] [Indexed: 05/23/2023]
Abstract
Protein phosphorylation regulates numerous cellular processes. Identifying the substrates and protein kinases involved is vital to understand how these important posttranslational modifications modulate biological function in eukaryotic cells. Pyrophosphatases catalyze the hydrolysis of inorganic phosphate (PPi) to inorganic phosphate Pi, driving biosynthetic reactions; they are essential for low cytosolic inorganic phosphate. It was suggested recently that posttranslational regulation of Family I soluble inorganic pyrophosphatases (sPPases) may affect their activity. We previously demonstrated that two pollen-expressed sPPases, Pr-p26.1a and Pr-p26.1b, from the flowering plant Papaver rhoeas were inhibited by phosphorylation. Despite the potential significance, there is a paucity of data on sPPase phosphorylation and regulation. Here, we used liquid chromatographic tandem mass spectrometry to map phosphorylation sites to the otherwise divergent amino-terminal extensions on these pollen sPPases. Despite the absence of reports in the literature on mapping phosphorylation sites on sPPases, a database survey of various proteomes identified a number of examples, suggesting that phosphorylation may be a more widely used mechanism to regulate these enzymes. Phosphomimetic mutants of Pr-p26.1a/b significantly and differentially reduced PPase activities by up to 2.5-fold at pH 6.8 and 52% in the presence of Ca2+ and hydrogen peroxide over unmodified proteins. This indicates that phosphoregulation of key sites can inhibit the catalytic responsiveness of these proteins in concert with key intracellular events. As sPPases are essential for many metabolic pathways in eukaryotic cells, our findings identify the phosphorylation of sPPases as a potential master regulatory mechanism that could be used to attenuate metabolism.
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Affiliation(s)
- Deborah J Eaves
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, B15 2TT Birmingham, United Kingdom (D.J.E., T.H., R.L.T., C.G.Z., N.P.J.C., B.H.J.d.e.G., S.A.W., H.J.C., F.C.H.F., V.E.F.-T.); and
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557 (Y.B., J.F.H.)
| | - Tamanna Haque
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, B15 2TT Birmingham, United Kingdom (D.J.E., T.H., R.L.T., C.G.Z., N.P.J.C., B.H.J.d.e.G., S.A.W., H.J.C., F.C.H.F., V.E.F.-T.); and
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557 (Y.B., J.F.H.)
| | - Richard L Tudor
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, B15 2TT Birmingham, United Kingdom (D.J.E., T.H., R.L.T., C.G.Z., N.P.J.C., B.H.J.d.e.G., S.A.W., H.J.C., F.C.H.F., V.E.F.-T.); and
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557 (Y.B., J.F.H.)
| | - Yoshimi Barron
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, B15 2TT Birmingham, United Kingdom (D.J.E., T.H., R.L.T., C.G.Z., N.P.J.C., B.H.J.d.e.G., S.A.W., H.J.C., F.C.H.F., V.E.F.-T.); and
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557 (Y.B., J.F.H.)
| | - Cleidiane G Zampronio
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, B15 2TT Birmingham, United Kingdom (D.J.E., T.H., R.L.T., C.G.Z., N.P.J.C., B.H.J.d.e.G., S.A.W., H.J.C., F.C.H.F., V.E.F.-T.); and
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557 (Y.B., J.F.H.)
| | - Nicholas P J Cotton
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, B15 2TT Birmingham, United Kingdom (D.J.E., T.H., R.L.T., C.G.Z., N.P.J.C., B.H.J.d.e.G., S.A.W., H.J.C., F.C.H.F., V.E.F.-T.); and
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557 (Y.B., J.F.H.)
| | - Barend H J de Graaf
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, B15 2TT Birmingham, United Kingdom (D.J.E., T.H., R.L.T., C.G.Z., N.P.J.C., B.H.J.d.e.G., S.A.W., H.J.C., F.C.H.F., V.E.F.-T.); and
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557 (Y.B., J.F.H.)
| | - Scott A White
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, B15 2TT Birmingham, United Kingdom (D.J.E., T.H., R.L.T., C.G.Z., N.P.J.C., B.H.J.d.e.G., S.A.W., H.J.C., F.C.H.F., V.E.F.-T.); and
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557 (Y.B., J.F.H.)
| | - Helen J Cooper
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, B15 2TT Birmingham, United Kingdom (D.J.E., T.H., R.L.T., C.G.Z., N.P.J.C., B.H.J.d.e.G., S.A.W., H.J.C., F.C.H.F., V.E.F.-T.); and
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557 (Y.B., J.F.H.)
| | - F Christopher H Franklin
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, B15 2TT Birmingham, United Kingdom (D.J.E., T.H., R.L.T., C.G.Z., N.P.J.C., B.H.J.d.e.G., S.A.W., H.J.C., F.C.H.F., V.E.F.-T.); and
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557 (Y.B., J.F.H.)
| | - Jeffery F Harper
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, B15 2TT Birmingham, United Kingdom (D.J.E., T.H., R.L.T., C.G.Z., N.P.J.C., B.H.J.d.e.G., S.A.W., H.J.C., F.C.H.F., V.E.F.-T.); and
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557 (Y.B., J.F.H.)
| | - Vernonica E Franklin-Tong
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, B15 2TT Birmingham, United Kingdom (D.J.E., T.H., R.L.T., C.G.Z., N.P.J.C., B.H.J.d.e.G., S.A.W., H.J.C., F.C.H.F., V.E.F.-T.); and
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557 (Y.B., J.F.H.)
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Schilling RK, Tester M, Marschner P, Plett DC, Roy SJ. AVP1: One Protein, Many Roles. Trends Plant Sci 2017; 22:154-162. [PMID: 27989652 DOI: 10.1016/j.tplants.2016.11.012] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2016] [Revised: 11/07/2016] [Accepted: 11/08/2016] [Indexed: 05/23/2023]
Abstract
Constitutive expression of the Arabidopsis vacuolar proton-pumping pyrophosphatase (H+-PPase) gene (AVP1) increases plant growth under various abiotic stress conditions and, importantly, under nonstressed conditions. Many interpretations have been proposed to explain these phenotypes, including greater vacuolar ion sequestration, increased auxin transport, enhanced heterotrophic growth, and increased transport of sucrose from source to sink tissues. In this review, we evaluate all the roles proposed for AVP1, using findings published to date from mutant plants lacking functional AVP1 and transgenic plants expressing AVP1. It is clear that AVP1 is one protein with many roles, and that one or more of these roles act to enhance plant growth. The complexity suggests that a systems biology approach to evaluate biological networks is required to investigate these intertwined roles.
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Affiliation(s)
- Rhiannon K Schilling
- School of Agriculture, Food and Wine, The University of Adelaide, Adelaide, SA 5005, Australia.
| | - Mark Tester
- Biological and Environmental Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal 23955-6900, Saudi Arabia
| | - Petra Marschner
- School of Agriculture, Food and Wine, The University of Adelaide, Adelaide, SA 5005, Australia
| | - Darren C Plett
- School of Agriculture, Food and Wine, The University of Adelaide, Adelaide, SA 5005, Australia; Australian Centre for Plant Functional Genomics, Adelaide, SA 5005, Australia
| | - Stuart J Roy
- School of Agriculture, Food and Wine, The University of Adelaide, Adelaide, SA 5005, Australia; Australian Centre for Plant Functional Genomics, Adelaide, SA 5005, Australia
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Abstract
Proton Pyrophosphatase (H+-PPase) is an evolutionarily conserved enzyme regarded as a bona fide vacuolar marker. However, H+-PPase also localizes at the plasma membrane of the phloem, where, evidence suggests that it functions as a Pyrophosphate Synthase and participates in phloem loading and photosynthate partitioning. We believe that this pyrophosphate synthesising function of H+-PPase is fundamentally rooted to its molecular structure, and here we postulate, on the basis of published crystal structures of membrane-bound pyrophosphatases, a plausible mechanism of pyrophosphate synthesis.
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Affiliation(s)
- Kamesh C. Regmi
- School of Life Sciences, Arizona State University, Tempe, AZ, USA
| | - Gaston A. Pizzio
- Center for Research in Agricultural Genomics, Cerdanyola del Vallès, Barcelona, Spain
| | - Roberto A. Gaxiola
- School of Life Sciences, Arizona State University, Tempe, AZ, USA
- CONTACT Roberto A. Gaxiola
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Sun X, Qi W, Yue Y, Ling H, Wang G, Song R. Maize ZmVPP5 is a truncated Vacuole H(+) -PPase that confers hypersensitivity to salt stress. J Integr Plant Biol 2016; 58:518-528. [PMID: 26728417 PMCID: PMC5071666 DOI: 10.1111/jipb.12462] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2015] [Accepted: 12/31/2015] [Indexed: 05/30/2023]
Abstract
In plants, Vacuole H(+) -PPases (VPPs) are important proton pumps and encoded by multiple genes. In addition to full-length VPPs, several truncated forms are expressed, but their biological functions are unknown. In this study, we functionally characterized maize vacuole H(+) -PPase 5 (ZmVPP5), a truncated VPP in the maize genome. Although ZmVPP5 shares high sequence similarity with ZmVPP1, ZmVPP5 lacks the complete structure of the conserved proton transport and the inorganic pyrophosphatase-related domain. Phylogenetic analysis suggests that ZmVPP5 might be derived from an incomplete gene duplication event. ZmVPP5 is expressed in multiple tissues, and ZmVPP5 was detected in the plasma membrane, vacuole membrane and nuclei of maize cells. The overexpression of ZmVPP5 in yeast cells caused a hypersensitivity to salt stress. Transgenic maize lines with overexpressed ZmVPP5 also exhibited the salt hypersensitivity phenotype. A yeast two-hybrid analysis identified the ZmBag6-like protein as a putative ZmVPP5-interacting protein. The results of bimolecular luminescence complementation (BiLC) assay suggest an interaction between ZmBag6-like protein and ZmVPP5 in vivo. Overall, this study suggests that ZmVPP5 might act as a VPP antagonist and participate in the cellular response to salt stress. Our study of ZmVPP5 has expanded the understanding of the origin and functions of truncated forms of plant VPPs.
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Affiliation(s)
- Xiaoliang Sun
- Shanghai key Laboratory of Bio-Energy Crops, School of Life Sciences, Shanghai University, Shanghai 200444, China
| | - Weiwei Qi
- Shanghai key Laboratory of Bio-Energy Crops, School of Life Sciences, Shanghai University, Shanghai 200444, China
- Coordinated Crop Biology Research Center(CBRC), Beijing 100193, China
| | - Yihong Yue
- Shanghai key Laboratory of Bio-Energy Crops, School of Life Sciences, Shanghai University, Shanghai 200444, China
| | - Huiling Ling
- Shanghai key Laboratory of Bio-Energy Crops, School of Life Sciences, Shanghai University, Shanghai 200444, China
| | - Gang Wang
- Shanghai key Laboratory of Bio-Energy Crops, School of Life Sciences, Shanghai University, Shanghai 200444, China
- Coordinated Crop Biology Research Center(CBRC), Beijing 100193, China
| | - Rentao Song
- Shanghai key Laboratory of Bio-Energy Crops, School of Life Sciences, Shanghai University, Shanghai 200444, China
- Coordinated Crop Biology Research Center(CBRC), Beijing 100193, China
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Han YL, Song HX, Liao Q, Yu Y, Jian SF, Lepo JE, Liu Q, Rong XM, Tian C, Zeng J, Guan CY, Ismail AM, Zhang ZH. Nitrogen Use Efficiency Is Mediated by Vacuolar Nitrate Sequestration Capacity in Roots of Brassica napus. Plant Physiol 2016; 170:1684-98. [PMID: 26757990 PMCID: PMC4775117 DOI: 10.1104/pp.15.01377] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2015] [Accepted: 01/10/2016] [Indexed: 05/08/2023]
Abstract
Enhancing nitrogen use efficiency (NUE) in crop plants is an important breeding target to reduce excessive use of chemical fertilizers, with substantial benefits to farmers and the environment. In Arabidopsis (Arabidopsis thaliana), allocation of more NO3 (-) to shoots was associated with higher NUE; however, the commonality of this process across plant species have not been sufficiently studied. Two Brassica napus genotypes were identified with high and low NUE. We found that activities of V-ATPase and V-PPase, the two tonoplast proton-pumps, were significantly lower in roots of the high-NUE genotype (Xiangyou15) than in the low-NUE genotype (814); and consequently, less vacuolar NO3 (-) was retained in roots of Xiangyou15. Moreover, NO3 (-) concentration in xylem sap, [(15)N] shoot:root (S:R) and [NO3 (-)] S:R ratios were significantly higher in Xiangyou15. BnNRT1.5 expression was higher in roots of Xiangyou15 compared with 814, while BnNRT1.8 expression was lower. In both B. napus treated with proton pump inhibitors or Arabidopsis mutants impaired in proton pump activity, vacuolar sequestration capacity (VSC) of NO3 (-) in roots substantially decreased. Expression of NRT1.5 was up-regulated, but NRT1.8 was down-regulated, driving greater NO3 (-) long-distance transport from roots to shoots. NUE in Arabidopsis mutants impaired in proton pumps was also significantly higher than in the wild type col-0. Taken together, these data suggest that decrease in VSC of NO3 (-) in roots will enhance transport to shoot and essentially contribute to higher NUE by promoting NO3 (-) allocation to aerial parts, likely through coordinated regulation of NRT1.5 and NRT1.8.
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Affiliation(s)
- Yong-Liang Han
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Hai-Xing Song
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Qiong Liao
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Yin Yu
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Shao-Fen Jian
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Joe Eugene Lepo
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Qiang Liu
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Xiang-Min Rong
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Chang Tian
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Jing Zeng
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Chun-Yun Guan
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Abdelbagi M Ismail
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Zhen-Hua Zhang
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
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40
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Han YL, Song HX, Liao Q, Yu Y, Jian SF, Lepo JE, Liu Q, Rong XM, Tian C, Zeng J, Guan CY, Ismail AM, Zhang ZH. Nitrogen Use Efficiency Is Mediated by Vacuolar Nitrate Sequestration Capacity in Roots of Brassica napus. Plant Physiol 2016. [PMID: 26757990 DOI: 10.1014/pp.15.01377] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Enhancing nitrogen use efficiency (NUE) in crop plants is an important breeding target to reduce excessive use of chemical fertilizers, with substantial benefits to farmers and the environment. In Arabidopsis (Arabidopsis thaliana), allocation of more NO3 (-) to shoots was associated with higher NUE; however, the commonality of this process across plant species have not been sufficiently studied. Two Brassica napus genotypes were identified with high and low NUE. We found that activities of V-ATPase and V-PPase, the two tonoplast proton-pumps, were significantly lower in roots of the high-NUE genotype (Xiangyou15) than in the low-NUE genotype (814); and consequently, less vacuolar NO3 (-) was retained in roots of Xiangyou15. Moreover, NO3 (-) concentration in xylem sap, [(15)N] shoot:root (S:R) and [NO3 (-)] S:R ratios were significantly higher in Xiangyou15. BnNRT1.5 expression was higher in roots of Xiangyou15 compared with 814, while BnNRT1.8 expression was lower. In both B. napus treated with proton pump inhibitors or Arabidopsis mutants impaired in proton pump activity, vacuolar sequestration capacity (VSC) of NO3 (-) in roots substantially decreased. Expression of NRT1.5 was up-regulated, but NRT1.8 was down-regulated, driving greater NO3 (-) long-distance transport from roots to shoots. NUE in Arabidopsis mutants impaired in proton pumps was also significantly higher than in the wild type col-0. Taken together, these data suggest that decrease in VSC of NO3 (-) in roots will enhance transport to shoot and essentially contribute to higher NUE by promoting NO3 (-) allocation to aerial parts, likely through coordinated regulation of NRT1.5 and NRT1.8.
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Affiliation(s)
- Yong-Liang Han
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Hai-Xing Song
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Qiong Liao
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Yin Yu
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Shao-Fen Jian
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Joe Eugene Lepo
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Qiang Liu
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Xiang-Min Rong
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Chang Tian
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Jing Zeng
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Chun-Yun Guan
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Abdelbagi M Ismail
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
| | - Zhen-Hua Zhang
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Hunan Agricultural University, Changsha, 410128, China (Y.-L.H., H.-X.S., Q.Liao, Y.Y., S.-F.J., Q.Liu, X.-M.R., C.T., J.Z., C.-Y.G., Z.-H.Z.);National Center of Oilseed Crops Improvement, Hunan Branch, Changsha, 410128, China (C.-Y.G.); Center for Environmental Diagnostics and Bioremediation, University of West Florida, Pensacola, Florida 32514, (J.E.L.); andCrop and Environment Sciences Division, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines (A.M.I.)
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Khadilkar AS, Yadav UP, Salazar C, Shulaev V, Paez-Valencia J, Pizzio GA, Gaxiola RA, Ayre BG. Constitutive and Companion Cell-Specific Overexpression of AVP1, Encoding a Proton-Pumping Pyrophosphatase, Enhances Biomass Accumulation, Phloem Loading, and Long-Distance Transport. Plant Physiol 2016; 170:401-14. [PMID: 26530315 PMCID: PMC4704589 DOI: 10.1104/pp.15.01409] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2015] [Accepted: 10/30/2015] [Indexed: 05/18/2023]
Abstract
Plant productivity is determined in large part by the partitioning of assimilates between the sites of production and the sites of utilization. Proton-pumping pyrophosphatases (H(+)-PPases) are shown to participate in many energetic plant processes, including general growth and biomass accumulation, CO2 fixation, nutrient acquisition, and stress responses. H(+)-PPases have a well-documented role in hydrolyzing pyrophosphate (PPi) and capturing the released energy to pump H(+) across the tonoplast and endomembranes to create proton motive force (pmf). Recently, an additional role for H(+)-PPases in phloem loading and biomass partitioning was proposed. In companion cells (CCs) of the phloem, H(+)-PPases localize to the plasma membrane rather than endomembranes, and rather than hydrolyzing PPi to create pmf, pmf is utilized to synthesize PPi. Additional PPi in the CCs promotes sucrose oxidation and ATP synthesis, which the plasma membrane P-type ATPase in turn uses to create more pmf for phloem loading of sucrose via sucrose-H(+) symporters. To test this model, transgenic Arabidopsis (Arabidopsis thaliana) plants were generated with constitutive and CC-specific overexpression of AVP1, encoding type 1 ARABIDOPSIS VACUOLAR PYROPHOSPHATASE1. Plants with both constitutive and CC-specific overexpression accumulated more biomass in shoot and root systems. (14)C-labeling experiments showed enhanced photosynthesis, phloem loading, phloem transport, and delivery to sink organs. The results obtained with constitutive and CC-specific promoters were very similar, such that the growth enhancement mediated by AVP1 overexpression can be attributed to its role in phloem CCs. This supports the model for H(+)-PPases functioning as PPi synthases in the phloem by arguing that the increases in biomass observed with AVP1 overexpression stem from improved phloem loading and transport.
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Affiliation(s)
- Aswad S Khadilkar
- Department of Biological Sciences, University of North Texas, Denton, Texas 76203 (A.S.K., U.P.Y., C.S., V.S., B.G.A.); andSchool of Life Sciences, Arizona State University, Tempe, Arizona 85287 (J.P.-V., G.A.P., R.A.G.)
| | - Umesh P Yadav
- Department of Biological Sciences, University of North Texas, Denton, Texas 76203 (A.S.K., U.P.Y., C.S., V.S., B.G.A.); andSchool of Life Sciences, Arizona State University, Tempe, Arizona 85287 (J.P.-V., G.A.P., R.A.G.)
| | - Carolina Salazar
- Department of Biological Sciences, University of North Texas, Denton, Texas 76203 (A.S.K., U.P.Y., C.S., V.S., B.G.A.); andSchool of Life Sciences, Arizona State University, Tempe, Arizona 85287 (J.P.-V., G.A.P., R.A.G.)
| | - Vladimir Shulaev
- Department of Biological Sciences, University of North Texas, Denton, Texas 76203 (A.S.K., U.P.Y., C.S., V.S., B.G.A.); andSchool of Life Sciences, Arizona State University, Tempe, Arizona 85287 (J.P.-V., G.A.P., R.A.G.)
| | - Julio Paez-Valencia
- Department of Biological Sciences, University of North Texas, Denton, Texas 76203 (A.S.K., U.P.Y., C.S., V.S., B.G.A.); andSchool of Life Sciences, Arizona State University, Tempe, Arizona 85287 (J.P.-V., G.A.P., R.A.G.)
| | - Gaston A Pizzio
- Department of Biological Sciences, University of North Texas, Denton, Texas 76203 (A.S.K., U.P.Y., C.S., V.S., B.G.A.); andSchool of Life Sciences, Arizona State University, Tempe, Arizona 85287 (J.P.-V., G.A.P., R.A.G.)
| | - Roberto A Gaxiola
- Department of Biological Sciences, University of North Texas, Denton, Texas 76203 (A.S.K., U.P.Y., C.S., V.S., B.G.A.); andSchool of Life Sciences, Arizona State University, Tempe, Arizona 85287 (J.P.-V., G.A.P., R.A.G.)
| | - Brian G Ayre
- Department of Biological Sciences, University of North Texas, Denton, Texas 76203 (A.S.K., U.P.Y., C.S., V.S., B.G.A.); andSchool of Life Sciences, Arizona State University, Tempe, Arizona 85287 (J.P.-V., G.A.P., R.A.G.)
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Kriegel A, Andrés Z, Medzihradszky A, Krüger F, Scholl S, Delang S, Patir-Nebioglu MG, Gute G, Yang H, Murphy AS, Peer WA, Pfeiffer A, Krebs M, Lohmann JU, Schumacher K. Job Sharing in the Endomembrane System: Vacuolar Acidification Requires the Combined Activity of V-ATPase and V-PPase. Plant Cell 2015; 27:3383-96. [PMID: 26589552 PMCID: PMC4707456 DOI: 10.1105/tpc.15.00733] [Citation(s) in RCA: 72] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2015] [Revised: 10/21/2015] [Accepted: 11/05/2015] [Indexed: 05/19/2023]
Abstract
The presence of a large central vacuole is one of the hallmarks of a prototypical plant cell, and the multiple functions of this compartment require massive fluxes of molecules across its limiting membrane, the tonoplast. Transport is assumed to be energized by the membrane potential and the proton gradient established by the combined activity of two proton pumps, the vacuolar H(+)-pyrophosphatase (V-PPase) and the vacuolar H(+)-ATPase (V-ATPase). Exactly how labor is divided between these two enzymes has remained elusive. Here, we provide evidence using gain- and loss-of-function approaches that lack of the V-ATPase cannot be compensated for by increased V-PPase activity. Moreover, we show that increased V-ATPase activity during cold acclimation requires the presence of the V-PPase. Most importantly, we demonstrate that a mutant lacking both of these proton pumps is conditionally viable and retains significant vacuolar acidification, pointing to a so far undetected contribution of the trans-Golgi network/early endosome-localized V-ATPase to vacuolar pH.
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Affiliation(s)
- Anne Kriegel
- Department of Plant Developmental Biology, Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany
| | - Zaida Andrés
- Department of Plant Developmental Biology, Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany
| | - Anna Medzihradszky
- Department of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany
| | - Falco Krüger
- Department of Plant Developmental Biology, Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany
| | - Stefan Scholl
- Department of Plant Developmental Biology, Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany
| | - Simon Delang
- Department of Plant Developmental Biology, Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany
| | - M Görkem Patir-Nebioglu
- Department of Plant Developmental Biology, Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany
| | - Gezahegn Gute
- Plant Science and Landscape Architecture, University of Maryland, College Park, Maryland 20742
| | - Haibing Yang
- Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907
| | - Angus S Murphy
- Plant Science and Landscape Architecture, University of Maryland, College Park, Maryland 20742
| | - Wendy Ann Peer
- Plant Science and Landscape Architecture, University of Maryland, College Park, Maryland 20742 Environmental Science and Technology, University of Maryland, College Park, Maryland 20742
| | - Anne Pfeiffer
- Department of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany
| | - Melanie Krebs
- Department of Plant Developmental Biology, Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany
| | - Jan U Lohmann
- Department of Plant Developmental Biology, Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany
| | - Karin Schumacher
- Department of Plant Developmental Biology, Centre for Organismal Studies, Heidelberg University, 69120 Heidelberg, Germany
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43
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Lv S, Jiang P, Nie L, Chen X, Tai F, Wang D, Fan P, Feng J, Bao H, Wang J, Li Y. H(+) -pyrophosphatase from Salicornia europaea confers tolerance to simultaneously occurring salt stress and nitrogen deficiency in Arabidopsis and wheat. Plant Cell Environ 2015; 38:2433-49. [PMID: 25920512 DOI: 10.1111/pce.12557] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2014] [Accepted: 04/20/2015] [Indexed: 05/14/2023]
Abstract
High salinity and nitrogen (N) deficiency in soil are two key factors limiting crop productivity, and they usually occur simultaneously. Here we firstly found that H(+) -PPase is involved in salt-stimulated NO3 (-) uptake in the euhalophyte Salicornia europaea. Then, two genes (named SeVP1 and SeVP2) encoding H(+) -PPase from S. europaea were characterized. The expression of SeVP1 and SeVP2 was induced by salt stress and N starvation. Both SeVP1 or SeVP2 transgenic Arabidopsis and wheat plants outperformed the wild types (WTs) when high salt and low N occur simultaneously. The transgenic Arabidopsis plants maintained higher K(+) /Na(+) ratio in leaves and exhibited increased NO3 (-) uptake, inorganic pyrophosphate-dependent vacuolar nitrate efflux and assimilation capacity under this double stresses. Furthermore, they had more soluble sugars in shoots and roots and less starch accumulation in shoots than WT. These performances can be explained by the up-regulated expression of ion, nitrate and sugar transporter genes in transgenic plants. Taken together, our results suggest that up-regulation of H(+) -PPase favours the transport of photosynthates to root, which could promote root growth and integrate N and carbon metabolism in plant. This work provides potential strategies for improving crop yields challenged by increasing soil salinization and shrinking farmland.
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Affiliation(s)
- Sulian Lv
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Ping Jiang
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Lingling Nie
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Xianyang Chen
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Fang Tai
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Duoliya Wang
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Pengxiang Fan
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Juanjuan Feng
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Hexigeduleng Bao
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Jinhui Wang
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Yinxin Li
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
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Gouiaa S, Khoudi H. Co-expression of vacuolar Na(+)/H(+) antiporter and H(+)-pyrophosphatase with an IRES-mediated dicistronic vector improves salinity tolerance and enhances potassium biofortification of tomato. Phytochemistry 2015; 117:537-546. [PMID: 26047526 DOI: 10.1016/j.phytochem.2015.05.016] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2014] [Revised: 05/18/2015] [Accepted: 05/26/2015] [Indexed: 06/04/2023]
Abstract
Potassium (K) deficiency is a worldwide problem. Thus, the K biofortification of crops is needed to enhance human nutrition. Tomato represents an ideal candidate for such biofortification programs thanks to its widespread distribution and its easy growth on a commercial scale. However, although tomato is moderately tolerant to abiotic stresses, the crop losses due to salinity can be severe. In this study, we generated transgenic tomato plants over-expressing a Na(+)-K(+)/H(+) exchanger gene (TNHXS1), singly or with H(+)-pyrophosphatase (H(+)-PPiase) gene using a bicistronic construct. Transgenic tomato lines co-expressing both genes (LNV) significantly showed higher salinity tolerance than the wild-type (WT) plans or those expressing the TNHXS1 gene alone (LN). Indeed, under salt stress conditions, double transgenic plants produced higher biomass and retained more chlorophyll and catalase (CAT) activity. In addition, they showed earlier flowering and produced more fruits. To address K deficiencies in humans, an increase of 50% in K content of vegetable products was proposed. In this study, ion content analysis revealed that, under salt stress, fruits from double transgenic plants accumulated 5 times more potassium and 9 times less sodium than WT counterparts. Interestingly, the ionomic analysis of tomato fruits also revealed that LNV had a distinct profile compared to WT and to LN plants. Indeed, LNV fruits accumulated less Fe(2+), Ca(2+), Mg(2+) and Zn(2+), but more Mn(2+). This study demonstrates the effectiveness of bicistronic constructs as an important tool for the enhancement of biofortification and salt stress tolerance in crops.
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Affiliation(s)
- Sandra Gouiaa
- Laboratory of Plant Protection and Improvement, Center of Biotechnology of Sfax (CBS), Route Sidi Mansour Km 6, B.P'1177', 3018 Sfax, Tunisia
| | - Habib Khoudi
- Laboratory of Plant Protection and Improvement, Center of Biotechnology of Sfax (CBS), Route Sidi Mansour Km 6, B.P'1177', 3018 Sfax, Tunisia.
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Abstract
Major depressive disorder (MDD), one of the most frequently encountered forms of mental illness and a leading cause of disability worldwide, poses a major challenge to genetic analysis. To date, no robustly replicated genetic loci have been identified, despite analysis of more than 9,000 cases. Here, using low-coverage whole-genome sequencing of 5,303 Chinese women with recurrent MDD selected to reduce phenotypic heterogeneity, and 5,337 controls screened to exclude MDD, we identified, and subsequently replicated in an independent sample, two loci contributing to risk of MDD on chromosome 10: one near the SIRT1 gene (P = 2.53 × 10(-10)), the other in an intron of the LHPP gene (P = 6.45 × 10(-12)). Analysis of 4,509 cases with a severe subtype of MDD, melancholia, yielded an increased genetic signal at the SIRT1 locus. We attribute our success to the recruitment of relatively homogeneous cases with severe illness.
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46
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Yang Y, Tang RJ, Li B, Wang HH, Jin YL, Jiang CM, Bao Y, Su HY, Zhao N, Ma XJ, Yang L, Chen SL, Cheng XH, Zhang HX. Overexpression of a Populus trichocarpa H+-pyrophosphatase gene PtVP1.1 confers salt tolerance on transgenic poplar. Tree Physiol 2015; 35:663-77. [PMID: 25877769 DOI: 10.1093/treephys/tpv027] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2015] [Accepted: 03/08/2015] [Indexed: 05/20/2023]
Abstract
The Arabidopsis vacuolar H(+)-pyrophosphatase (AVP1) has been well studied and subsequently employed to improve salt and/or drought resistance in herbaceous plants. However, the exact function of H(+)-pyrophosphatase in woody plants still remains unknown. In this work, we cloned a homolog of type I H(+)-pyrophosphatase gene, designated as PtVP1.1, from Populus trichocarpa, and investigated its function in both Arabidopsis and poplar. The deduced translation product PtVP1.1 shares 89.74% identity with AVP1. Semi-quantitative reverse transcription polymerase chain reaction (RT-PCR) and quantitative real-time PCR analyses revealed a ubiquitous expression pattern of PtVP1.1 in various tissues, including roots, stems, leaves and shoot tips. Heterologous expression of PtVP1.1 rescued the retarded-root-growth phenotype of avp1, an Arabidopsis knock out mutant of AVP1, on low carbohydrate medium. Overexpression of PtVP1.1 in poplar (P. davidiana × P. bolleana) led to more vigorous growth of transgenic plants in the presence of 150 mM NaCl. Microsomal membrane vesicles derived from PtVP1.1 transgenic plants exhibited higher H(+)-pyrophosphatase hydrolytic activity than those from wild type (WT). Further studies indicated that the improved salt tolerance was associated with a decreased Na(+) and increased K(+) accumulation in the leaves of transgenic plants. Na(+) efflux and H(+) influx in the roots of transgenic plants were also significantly higher than those in the WT plants. All these results suggest that PtVP1.1 is a functional counterpart of AVP1 and can be genetically engineered for salt tolerance improvement in trees.
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Affiliation(s)
- Y Yang
- College of Agriculture, Ludong University, 186 Hongqizhong Road, Yantai, China 264025 National Key Laboratory of Plant Molecular Genetics, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai, China 200032
| | - R J Tang
- National Key Laboratory of Plant Molecular Genetics, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai, China 200032 Present address: Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA
| | - B Li
- National Key Laboratory of Plant Molecular Genetics, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai, China 200032
| | - H H Wang
- National Key Laboratory of Plant Molecular Genetics, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai, China 200032
| | - Y L Jin
- National Key Laboratory of Plant Molecular Genetics, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai, China 200032
| | - C M Jiang
- National Key Laboratory of Plant Molecular Genetics, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai, China 200032
| | - Y Bao
- National Key Laboratory of Plant Molecular Genetics, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai, China 200032
| | - H Y Su
- College of Agriculture, Ludong University, 186 Hongqizhong Road, Yantai, China 264025
| | - N Zhao
- College of Biological Sciences and Technology, Beijing Forestry University, 35 Qinghua-East Road, Beijing, China 100083
| | - X J Ma
- College of Biological Sciences and Technology, Beijing Forestry University, 35 Qinghua-East Road, Beijing, China 100083
| | - L Yang
- College of Life Sciences, Nanjing University, 22 Hankou Road, Nanjing, China 210093
| | - S L Chen
- College of Biological Sciences and Technology, Beijing Forestry University, 35 Qinghua-East Road, Beijing, China 100083
| | - X H Cheng
- College of Agriculture, Ludong University, 186 Hongqizhong Road, Yantai, China 264025
| | - H X Zhang
- College of Agriculture, Ludong University, 186 Hongqizhong Road, Yantai, China 264025 National Key Laboratory of Plant Molecular Genetics, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai, China 200032
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Chen Y, Li L, Zong J, Chen J, Guo H, Guo A, Liu J. Heterologous expression of the halophyte Zoysia matrella H⁺-pyrophosphatase gene improved salt tolerance in Arabidopsis thaliana. Plant Physiol Biochem 2015; 91:49-55. [PMID: 25874657 DOI: 10.1016/j.plaphy.2015.04.004] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/01/2015] [Revised: 02/15/2015] [Accepted: 04/07/2015] [Indexed: 05/27/2023]
Abstract
A number of vacuolar H(+)-pyrophosphatase (VP) family genes play important roles in plant growth under salt stress condition. Despite their biological importance in plant salt-stress regulation, there is no report about VP in the halophytic turfgrass Zoysia matrella. Here, we isolated ZmVP1, a type I VP homologues gene encoding 768 amino acids by using the degenerated PCR and RACE PCR methods from Zoysia matrella. The expression level of ZmVP1 was significantly induced by salinity, drought and cold, but not by heat. ZmVP1 can restore the salt-tolerant ability of a salt-sensitive yeast strain. Overexpression of ZmVP1 in Arabidopsis thaliana resulted in more vigorous growth under salt stress. Moreover, the transgenic Arabidopsis accumulated more Na(+) and K(+) in the leaves compared to that of wild type plants under salt stress, had higher activities of V-ATPase and V-PPase, and showed higher relative gene expression levels of 5 stress-related genes (AtNHX1, AtLEA, AtP5CS, AtMn-SOD, AtAPX1). These results demonstrated that ZmVP1 from Z. matrella was a functional tonoplast H(+)-pyrophosphatase contributing to salt tolerance potentially through regulating the Na(+) compartment in vacuole, K(+) assimilation, osmotic regulation and antioxidant response.
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Affiliation(s)
- Yu Chen
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Institute of Botany, Jiangsu Province & Chinese Academy of Sciences, Nanjing 210014, China
| | - Lanlan Li
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Institute of Botany, Jiangsu Province & Chinese Academy of Sciences, Nanjing 210014, China
| | - Junqin Zong
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Institute of Botany, Jiangsu Province & Chinese Academy of Sciences, Nanjing 210014, China
| | - Jingbo Chen
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Institute of Botany, Jiangsu Province & Chinese Academy of Sciences, Nanjing 210014, China
| | - Hailin Guo
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Institute of Botany, Jiangsu Province & Chinese Academy of Sciences, Nanjing 210014, China
| | - Aigui Guo
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Institute of Botany, Jiangsu Province & Chinese Academy of Sciences, Nanjing 210014, China
| | - Jianxiu Liu
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Institute of Botany, Jiangsu Province & Chinese Academy of Sciences, Nanjing 210014, China.
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Mishra DR, Chaudhary S, Krishna BM, Mishra SK. Identification of Critical Elements for Regulation of Inorganic Pyrophosphatase (PPA1) in MCF7 Breast Cancer Cells. PLoS One 2015; 10:e0124864. [PMID: 25923237 PMCID: PMC4414593 DOI: 10.1371/journal.pone.0124864] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2014] [Accepted: 03/11/2015] [Indexed: 12/21/2022] Open
Abstract
Cytosolic inorganic pyrophosphatase plays an important role in the cellular metabolism by hydrolyzing inorganic pyrophosphate (PPi) formed as a by-product of various metabolic reactions. Inorganic pyrophosphatases are known to be associated with important functions related to the growth and development of various organisms. In humans, the expression of inorganic pyrophosphatase (PPA1) is deregulated in different types of cancer and is involved in the migration and invasion of gastric cancer cells and proliferation of ovarian cancer cells. However, the transcriptional regulation of the gene encoding PPA1 is poorly understood. To gain insights into PPA1 gene regulation, a 1217 bp of its 5'-flanking region was cloned and analyzed. The 5'-deletion analysis of the promoter revealed a 266 bp proximal promoter region exhibit most of the transcriptional activity and upon sequence analysis, three putative Sp1 binding sites were found to be present in this region. Binding of Sp1 to the PPA1 promoter was confirmed by Electrophoretic mobility shift assay (EMSA) and Chromatin immunoprecipitation (ChIP) assay. Importance of these binding sites was verified by site-directed mutagenesis and overexpression of Sp1 transactivates PPA1 promoter activity, upregulates protein expression and increases chromatin accessibility. p300 binds to the PPA1 promoter and stimulates Sp1 induced promoter activity. Trichostatin A (TSA), a histone deacetylase (HDAC) inhibitor induces PPA1 promoter activity and protein expression and HAT activity of p300 was important in regulation of PPA1 expression. These results demonstrated that PPA1 is positively regulated by Sp1 and p300 coactivates Sp1 induced PPA1 promoter activity and histone acetylation/deacetylation may contribute to a local chromatin remodeling across the PPA1 promoter. Further, knockdown of PPA1 decreased colony formation and viability of MCF7 cells.
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Affiliation(s)
- Dipti Ranjan Mishra
- Cancer Biology Laboratory, Gene function and regulation Group, Institute of Life Sciences, Bhubaneswar, Odisha, India
| | - Sanjib Chaudhary
- Cancer Biology Laboratory, Gene function and regulation Group, Institute of Life Sciences, Bhubaneswar, Odisha, India
| | - B. Madhu Krishna
- Cancer Biology Laboratory, Gene function and regulation Group, Institute of Life Sciences, Bhubaneswar, Odisha, India
| | - Sandip K. Mishra
- Cancer Biology Laboratory, Gene function and regulation Group, Institute of Life Sciences, Bhubaneswar, Odisha, India
- * E-mail:
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49
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Pizzio GA, Paez-Valencia J, Khadilkar AS, Regmi K, Patron-Soberano A, Zhang S, Sanchez-Lares J, Furstenau T, Li J, Sanchez-Gomez C, Valencia-Mayoral P, Yadav UP, Ayre BG, Gaxiola RA. Arabidopsis type I proton-pumping pyrophosphatase expresses strongly in phloem, where it is required for pyrophosphate metabolism and photosynthate partitioning. Plant Physiol 2015. [PMID: 25681328 PMCID: PMC4378186 DOI: 10.1104/pp.15.00378] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Phloem loading is a critical process in plant physiology. The potential of regulating the translocation of photoassimilates from source to sink tissues represents an opportunity to increase crop yield. Pyrophosphate homeostasis is crucial for normal phloem function in apoplasmic loaders. The involvement of Arabidopsis (Arabidopsis thaliana) type I proton-pumping pyrophosphatase (AVP1) in phloem loading was analyzed at genetic, histochemical, and physiological levels. A transcriptional AVP1 promoter::GUS fusion revealed phloem activity in source leaves. Ubiquitous AVP1 overexpression (35S::AVP1 cassette) enhanced shoot biomass, photoassimilate production and transport, rhizosphere acidification, and expression of sugar-induced root ion transporter genes (POTASSIUM TRANSPORTER2 [KUP2], NITRATE TRANSPORTER2.1 [NRT2.1], NRT2.4, and PHOSPHATE TRANSPORTER1.4 [PHT1.4]). Phloem-specific AVP1 overexpression (Commelina Yellow Mottle Virus promoter [pCOYMV]::AVP1) elicited similar phenotypes. By contrast, phloem-specific AVP1 knockdown (pCoYMV::RNAiAVP1) resulted in stunted seedlings in sucrose-deprived medium. We also present a promoter mutant avp1-2 (SALK046492) with a 70% reduction of expression that did not show severe growth impairment. Interestingly, AVP1 protein in this mutant is prominent in the phloem. Moreover, expression of an Escherichia coli-soluble pyrophosphatase in the phloem (pCoYMV::pyrophosphatase) of avp1-2 plants resulted in severe dwarf phenotype and abnormal leaf morphology. We conclude that the Proton-Pumping Pyrophosphatase AVP1 localized at the plasma membrane of the sieve element-companion cell complexes functions as a synthase, and that this activity is critical for the maintenance of pyrophosphate homeostasis required for phloem function.
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Affiliation(s)
- Gaston A Pizzio
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Julio Paez-Valencia
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Aswad S Khadilkar
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Kamesh Regmi
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Araceli Patron-Soberano
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Shangji Zhang
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Jonathan Sanchez-Lares
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Tara Furstenau
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Jisheng Li
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Concepcion Sanchez-Gomez
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Pedro Valencia-Mayoral
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Umesh P Yadav
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Brian G Ayre
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Roberto A Gaxiola
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
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50
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Pizzio GA, Paez-Valencia J, Khadilkar AS, Regmi K, Patron-Soberano A, Zhang S, Sanchez-Lares J, Furstenau T, Li J, Sanchez-Gomez C, Valencia-Mayoral P, Yadav UP, Ayre BG, Gaxiola RA. Arabidopsis type I proton-pumping pyrophosphatase expresses strongly in phloem, where it is required for pyrophosphate metabolism and photosynthate partitioning. Plant Physiol 2015; 167:1541-53. [PMID: 25681328 PMCID: PMC4378163 DOI: 10.1104/pp.114.254342] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Phloem loading is a critical process in plant physiology. The potential of regulating the translocation of photoassimilates from source to sink tissues represents an opportunity to increase crop yield. Pyrophosphate homeostasis is crucial for normal phloem function in apoplasmic loaders. The involvement of Arabidopsis (Arabidopsis thaliana) type I proton-pumping pyrophosphatase (AVP1) in phloem loading was analyzed at genetic, histochemical, and physiological levels. A transcriptional AVP1 promoter::GUS fusion revealed phloem activity in source leaves. Ubiquitous AVP1 overexpression (35S::AVP1 cassette) enhanced shoot biomass, photoassimilate production and transport, rhizosphere acidification, and expression of sugar-induced root ion transporter genes (POTASSIUM TRANSPORTER2 [KUP2], NITRATE TRANSPORTER2.1 [NRT2.1], NRT2.4, and PHOSPHATE TRANSPORTER1.4 [PHT1.4]). Phloem-specific AVP1 overexpression (Commelina Yellow Mottle Virus promoter [pCOYMV]::AVP1) elicited similar phenotypes. By contrast, phloem-specific AVP1 knockdown (pCoYMV::RNAiAVP1) resulted in stunted seedlings in sucrose-deprived medium. We also present a promoter mutant avp1-2 (SALK046492) with a 70% reduction of expression that did not show severe growth impairment. Interestingly, AVP1 protein in this mutant is prominent in the phloem. Moreover, expression of an Escherichia coli-soluble pyrophosphatase in the phloem (pCoYMV::pyrophosphatase) of avp1-2 plants resulted in severe dwarf phenotype and abnormal leaf morphology. We conclude that the Proton-Pumping Pyrophosphatase AVP1 localized at the plasma membrane of the sieve element-companion cell complexes functions as a synthase, and that this activity is critical for the maintenance of pyrophosphate homeostasis required for phloem function.
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Affiliation(s)
- Gaston A Pizzio
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Julio Paez-Valencia
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Aswad S Khadilkar
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Kamesh Regmi
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Araceli Patron-Soberano
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Shangji Zhang
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Jonathan Sanchez-Lares
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Tara Furstenau
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Jisheng Li
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Concepcion Sanchez-Gomez
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Pedro Valencia-Mayoral
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Umesh P Yadav
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Brian G Ayre
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
| | - Roberto A Gaxiola
- School of Life Sciences, Arizona State University, Tempe, Arizona 852872 (G.A.P., J.P.-V., K.R., S.Z., J.S.-L., T.F., J.L., R.A.G.);Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (J.P.-V.);Department of Biological Sciences, University of North Texas, Denton, Texas 762031 (A.S.K., U.P.Y., B.G.A.);División de Biología Molecular, Laboratorio Nacional de Investigaciones en Nanociencias y Nanotecnología Instituto Potosino de Investigación Científica y Tecnológica, A.C. 78216 San Luis Potosí, Mexico (A.P.-S.); andDepartamento de Patología, Hospital Infantil de México, Federico Gómez, Mexico (C.S.-G., P.V.-M.)
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